JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RBM7_chr11_114395666_114415607	0/0	t0009	2807	5	0	1	4	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0010	2812	4	0	2	0	1	1	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0011	2812	4	4	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0012	2806	4	4	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0013	2811	3	3	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0014	2811	3	1	0	2	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0015	2812	3	3	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0016	2807	3	2	1	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0017	2807	3	3	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0018	2812	2	0	0	0	0	2	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0019	2807	2	0	2	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0020	2812	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0021	2812	1	0	0	0	1	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0022	2796	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0023	2812	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0024	2812	1	0	0	0	0	1	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0025	2807	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0026	2807	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0027	2806	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0028	2807	1	0	0	1	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0029	2807	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0030	2812	1	0	0	1	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0031	2807	1	0	0	1	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0032	2808	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0033	2807	1	0	0	0	0	1	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0034	2807	1	0	0	1	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0035	2807	1	0	1	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0036	2808	1	1	0	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0037	2807	1	0	1	0	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0038	2807	1	0	0	1	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0039	2807	1	0	0	1	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0040	2807	1	0	0	0	1	0	copy fasta	RBM7	chr11	114395666	114415607
RBM7_chr11_114395666_114415607	0/0	t0041	2812	1	0	0	1	0	0	copy fasta	RBM7	chr11	114395666	114415607
RBM8A_chr1_145916556_145932484	1/1	t0001	4385	135	22	38	47	7	19	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0002	4386	87	3	12	61	1	10	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0003	4384	46	27	1	13	0	5	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0004	4384	23	0	16	7	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0005	4385	21	14	2	4	0	1	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0006	4384	12	0	0	12	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0007	4384	6	0	0	6	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0008	4385	5	5	0	0	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0009	4384	3	0	3	0	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0010	4386	3	2	0	0	0	1	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0011	4385	3	2	0	0	0	1	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0012	4385	3	3	0	0	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0013	4384	2	0	0	2	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0014	4385	2	0	0	2	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0015	4386	2	2	0	0	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0016	4386	2	0	0	2	0	0	copy fasta	RBM8A	chr1	145916556	145932484
RBM8A_chr1_145916556_145932484	0/0	t0017	4384	2	2	0	0	0	0	copy fasta	RBM8A	chr1	145916556	145932484