JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RBMS3_chr3_29276071_30015386	1/0	t0009	7136	2	0	0	0	1	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0010	7138	2	0	0	2	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0011	7138	2	2	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0012	7137	2	2	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0013	7137	2	0	0	0	1	1	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0014	7138	2	2	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0015	7147	2	1	1	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0016	7146	2	0	2	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0017	7147	2	2	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0018	7139	2	1	0	0	0	1	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0019	7140	2	0	0	0	2	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0020	7146	2	0	2	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0021	7150	2	2	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0022	7148	2	1	1	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0023	7137	1	0	1	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0024	7137	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0025	7146	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0026	7142	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0027	7140	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0028	7136	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0029	7145	1	0	1	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0030	7136	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0031	7136	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0032	7143	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0033	7136	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0034	7137	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0035	7140	1	0	1	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0036	7137	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0037	7137	1	0	0	0	1	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0038	7144	1	0	0	0	0	1	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0039	7137	1	0	0	0	0	1	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0040	7137	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0041	7147	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0042	7138	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0043	7139	1	0	0	0	1	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0044	7139	1	0	0	0	0	1	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0045	7148	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0046	7139	1	0	1	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0047	7137	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0048	7145	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0049	7138	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0050	7138	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0051	7140	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0052	7138	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0053	7138	1	0	0	1	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0054	7139	1	0	1	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0055	7137	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0056	7138	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0057	7137	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386
RBMS3_chr3_29276071_30015386	0/0	t0058	7143	1	1	0	0	0	0	copy fasta	RBMS3	chr3	29276071	30015386