JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
RNASET2_chr6_166917113_166961550	0/0	t0070	7846	1	0	0	0	1	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0071	7846	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0072	7848	1	0	0	0	1	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0073	7847	1	0	1	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0074	7853	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0075	7846	1	0	0	0	1	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0076	7850	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0077	7846	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0078	7827	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0079	7828	1	0	1	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0080	7882	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0081	7885	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0082	7884	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0083	7883	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0084	7882	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0085	7884	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0086	7864	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0087	7883	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0088	7879	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0089	7797	1	0	0	0	1	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0090	7787	1	0	0	0	1	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0091	7800	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0092	7799	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0093	7800	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0094	7867	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0095	7836	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0096	7837	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0097	7843	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0098	7854	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0099	7839	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0100	7836	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0101	7837	1	0	1	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0102	7847	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0103	7847	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0104	7844	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0105	7843	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0106	7844	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0107	7826	1	0	0	0	1	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0108	7847	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0109	7846	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0110	7840	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0111	7839	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0112	7841	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0113	7840	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0114	7842	1	1	0	0	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0115	7846	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0116	7883	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0117	7800	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0118	7800	1	0	0	0	1	copy fasta	RNASET2	chr6	166917113	166961550
RNASET2_chr6_166917113_166961550	0/0	t0119	7800	1	0	0	1	0	copy fasta	RNASET2	chr6	166917113	166961550