JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RNF217_chr6_124957437_125097633	0/0	t0021	9804	3	3	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0022	9802	3	3	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0023	9803	2	2	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0024	9804	2	2	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0025	9806	2	0	1	0	1	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0026	9805	2	2	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0027	9803	2	1	1	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0028	9801	2	2	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0029	9805	2	0	0	2	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0030	9805	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0031	9805	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0032	9805	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0033	9805	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0034	9805	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0035	9805	1	0	0	0	0	1	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0036	9805	1	0	0	0	0	1	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0037	9803	1	0	1	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0038	9805	1	0	0	0	1	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0039	9806	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0040	9806	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0041	9801	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0042	9802	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0043	9801	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0044	9802	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0045	9804	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0046	9802	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0047	9801	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0048	9804	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0049	9806	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0050	9802	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0051	9803	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0052	9805	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0053	9805	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0054	9804	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0055	9805	1	0	1	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0056	9805	1	0	1	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0057	9805	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0058	9805	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0059	9805	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0060	9805	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0061	9805	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0062	9806	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0063	9782	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0064	9804	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0065	9805	1	0	1	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0066	9805	1	0	0	0	0	1	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0067	9805	1	0	0	0	0	1	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0068	9803	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0069	9803	1	0	0	1	0	0	copy fasta	RNF217	chr6	124957437	125097633
RNF217_chr6_124957437_125097633	0/0	t0070	9805	1	1	0	0	0	0	copy fasta	RNF217	chr6	124957437	125097633