JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RPL14_chr3_40452339_40473587	0/0	t0038	6488	2	0	0	2	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0039	6489	2	0	0	1	0	1	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0040	6489	2	0	0	2	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0041	6479	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0042	6488	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0043	6490	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0044	6488	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0045	6486	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0046	6487	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0047	6486	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0048	6488	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0049	6488	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0050	6488	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0051	6487	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0052	6487	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0053	6489	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0054	6489	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0055	6488	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0056	6489	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0057	6489	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0058	6488	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0059	6491	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0060	6490	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0061	6489	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0062	6492	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0063	6490	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0064	6490	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0065	6493	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/1	t0066	6495	1	0	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0067	6493	1	0	0	0	0	1	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0068	6494	1	0	0	0	0	1	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0069	6495	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0070	6493	1	0	1	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0071	6406	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0072	6494	1	0	0	0	1	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0073	6494	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0074	6493	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0075	6494	1	0	1	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0076	6494	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0077	6494	1	0	0	0	0	1	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0078	6494	1	0	0	0	0	1	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0079	6494	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0080	6494	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0081	6494	1	0	0	0	0	1	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0082	6495	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0083	6496	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0084	6491	1	1	0	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0085	6488	1	0	0	1	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0086	6491	1	0	1	0	0	0	copy fasta	RPL14	chr3	40452339	40473587
RPL14_chr3_40452339_40473587	0/0	t0087	6489	1	0	0	0	0	1	copy fasta	RPL14	chr3	40452339	40473587