JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RPL37_chr5_40820262_40840222	0/0	t0047	7282	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0048	7255	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0049	7256	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0050	7281	1	0	1	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0051	7280	1	0	1	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0052	7282	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0053	7286	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0054	7287	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0055	7284	1	0	1	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0056	7281	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0057	7278	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0058	7278	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0059	7278	1	0	1	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0060	7279	1	0	0	0	1	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0061	7280	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0062	7278	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0063	7279	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0064	7279	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0065	7280	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0066	7279	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0067	7286	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0068	7287	1	0	0	0	0	1	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0069	7286	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0070	7285	1	0	0	0	0	1	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0071	7286	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0072	7286	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0073	7284	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0074	7284	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0075	7284	1	0	1	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0076	7282	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0077	7287	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0078	7275	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0079	7276	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0080	7286	1	0	1	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0081	7286	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0082	7288	1	0	0	0	0	1	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0083	7286	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0084	7286	1	0	0	0	0	1	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0085	7285	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0086	7286	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0087	7286	1	0	0	0	0	1	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0088	7286	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0089	7286	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0090	7284	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0091	7286	1	0	1	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0092	7286	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0093	7287	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0094	7285	1	0	0	1	0	0	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0095	7288	1	0	0	0	0	1	copy fasta	RPL37	chr5	40820262	40840222
RPL37_chr5_40820262_40840222	0/0	t0096	7284	1	1	0	0	0	0	copy fasta	RPL37	chr5	40820262	40840222