JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RSBN1L_chr7_77691459_77788022	0/0	t0021	3866	2	0	2	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0022	3866	2	2	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0023	3864	1	0	0	0	0	1	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0024	3869	1	1	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0025	3867	1	0	1	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0026	3866	1	1	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0027	3864	1	1	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0028	3866	1	1	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0029	3866	1	1	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0030	3867	1	0	0	0	1	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0031	3864	1	1	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0032	3866	1	1	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0033	3867	1	0	1	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0034	3866	1	0	0	0	0	1	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0035	3865	1	1	0	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0036	3866	1	0	0	0	0	1	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0037	3868	1	0	0	1	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0038	3867	1	0	0	0	0	1	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0039	3868	1	0	1	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0040	3866	1	0	0	0	0	1	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0041	3866	1	0	1	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1L_chr7_77691459_77788022	0/0	t0042	3868	1	0	1	0	0	0	copy fasta	RSBN1L	chr7	77691459	77788022
RSBN1_chr1_113756832_113817476	0/0	t0001	4211	90	1	20	57	5	7	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	1/1	t0002	4213	83	24	13	29	5	10	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0003	4208	43	1	3	35	1	3	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0004	4214	41	15	17	1	3	5	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0005	4214	15	5	1	4	0	5	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0006	4212	9	3	0	6	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0007	4213	9	0	1	7	0	1	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0008	4210	8	7	0	1	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0009	4209	6	0	1	5	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0010	4214	5	4	0	1	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0011	4213	4	3	1	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0012	4215	3	2	1	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0013	4214	3	0	1	0	0	2	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0014	4213	2	0	2	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0015	4213	2	1	1	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0016	4214	2	0	0	2	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0017	4215	1	1	0	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0018	4213	1	0	1	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0019	4208	1	0	1	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0020	4208	1	1	0	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0021	4211	1	1	0	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0022	4215	1	0	1	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0023	4264	1	0	0	0	0	1	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0024	4213	1	0	0	1	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0025	4213	1	0	1	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0026	4213	1	0	0	1	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0027	4213	1	1	0	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476
RSBN1_chr1_113756832_113817476	0/0	t0028	4214	1	1	0	0	0	0	copy fasta	RSBN1	chr1	113756832	113817476