Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
BCR_chr22_23175509_23323037	0/0	t0124	2977	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0125	2975	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0126	2975	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0127	2975	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0128	2975	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0129	2977	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0130	2977	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0131	2976	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0132	2974	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0133	2972	1	0	1	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0134	2972	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0135	2972	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0136	2972	1	0	1	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0137	2972	1	0	0	0	1	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0138	2971	1	0	1	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0139	2973	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0140	2974	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0141	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0142	2974	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0143	2974	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0144	2974	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0145	2974	1	0	0	0	1	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0146	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0147	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0148	2974	1	0	1	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0149	2974	1	0	0	0	1	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0150	2974	1	0	1	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0151	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0152	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0153	2978	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0154	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0155	2977	1	0	1	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0156	2977	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0157	2977	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0158	2977	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0159	2977	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0160	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0161	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0162	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0163	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0164	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0165	2974	1	1	0	0	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0166	2976	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0167	2983	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0168	2983	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0169	2983	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0170	2983	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0171	2983	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0172	2983	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037
BCR_chr22_23175509_23323037	0/0	t0173	2983	1	0	0	1	0	copy fasta	BCR	chr22	23175509	23323037