JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ULBP3_chr6_150056053_150074121	0/0	t0038	2374	1	0	1	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0039	2375	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0040	2376	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0041	2376	1	0	0	1	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0042	2377	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0043	2377	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0044	2374	1	0	0	1	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0045	2375	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0046	2375	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0047	2374	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0048	2374	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0049	2373	1	0	0	0	0	1	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0050	2374	1	0	0	0	0	1	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0051	2377	1	0	0	1	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0052	2367	1	0	0	1	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0053	2373	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0054	2374	1	0	1	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/1	t0055	2374	1	0	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0056	2374	1	1	0	0	0	0	copy fasta	ULBP3	chr6	150056053	150074121
ULBP3_chr6_150056053_150074121	0/0	t0057	2374	1	0	0	0	1	0	copy fasta	ULBP3	chr6	150056053	150074121
ULK1_chr12_131889622_131928150	0/0	t0001	2170	122	65	20	31	2	4	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/1	t0002	2170	68	6	12	32	8	9	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0003	2170	59	6	8	38	2	5	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0004	2170	44	10	17	5	2	10	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0005	2170	10	8	2	0	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0006	2170	5	0	0	3	0	2	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0007	2171	3	0	0	3	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0008	2171	3	0	0	1	0	2	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0009	2170	3	0	0	3	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0010	2170	3	0	0	3	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0011	2170	2	0	0	0	0	2	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0012	2171	2	1	1	0	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0013	2170	2	2	0	0	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0014	2170	2	0	0	2	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0015	2170	2	0	0	2	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0016	2170	1	0	0	0	0	1	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0017	2170	1	0	0	1	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0018	2171	1	0	0	0	0	1	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0019	2170	1	1	0	0	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	1/0	t0020	2170	1	0	0	0	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0021	2170	1	1	0	0	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0022	2170	1	0	0	1	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0023	2170	1	0	0	1	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0024	2170	1	0	0	0	0	1	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0025	2170	1	0	0	0	0	1	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0026	2170	1	0	0	1	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0027	2170	1	0	1	0	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0028	2170	1	0	0	1	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK1_chr12_131889622_131928150	0/0	t0029	2170	1	0	1	0	0	0	copy fasta	ULK1	chr12	131889622	131928150
ULK2_chr17_19765830_19872936	0/1	t0001	6041	98	22	15	44	5	11	copy fasta	ULK2	chr17	19765830	19872936