Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
C14orf119_chr14_23090505_23105456	0/0	t0038	2491	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0039	2491	1	1	0	0	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0040	2493	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0041	2492	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0042	2489	1	0	1	0	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0043	2492	1	0	1	0	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0044	2492	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0045	2492	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0046	2493	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0047	2492	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0048	2492	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0049	2490	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0050	2491	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0051	2492	1	0	0	0	0	1	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0052	2489	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0053	2490	1	0	0	1	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf119_chr14_23090505_23105456	0/0	t0054	2492	1	0	1	0	0	0	copy fasta	C14orf119	chr14	23090505	23105456
C14orf132_chr14_96034362_96098971	0/0	t0001	7376	120	17	21	62	3	17	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0002	7377	47	3	12	20	3	9	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0003	7376	37	0	0	36	0	1	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0004	7376	29	4	6	8	2	9	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0005	7376	8	0	0	8	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0006	7376	8	8	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0007	7375	7	5	2	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0008	7376	7	7	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0009	7377	7	2	1	0	3	1	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0010	7376	7	1	5	1	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0011	7376	5	4	1	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0012	7376	5	0	0	5	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0013	7374	4	0	3	0	1	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0014	7376	4	0	2	0	1	1	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0015	7376	4	0	4	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0016	7376	4	3	1	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0017	7376	4	4	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0018	7376	4	4	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0019	7374	3	0	1	0	1	1	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0020	7376	3	3	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0021	7376	3	3	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0022	7376	3	0	0	3	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0023	7376	3	0	2	0	1	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0024	7376	2	0	1	0	1	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0025	7376	2	2	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0026	7376	2	2	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0027	7376	2	0	0	2	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0028	7375	2	2	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0029	7376	1	0	0	1	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0030	7376	1	0	0	0	0	1	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0031	7377	1	1	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0032	7376	1	1	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971
C14orf132_chr14_96034362_96098971	0/0	t0033	7376	1	1	0	0	0	0	copy fasta	C14orf132	chr14	96034362	96098971