JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
UTS2B_chr3_191262168_191335526	0/0	t0004	2026	26	7	2	17	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0005	2027	20	0	0	20	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0006	2023	18	0	7	5	3	3	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0007	2026	17	0	3	11	0	3	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0008	2026	16	3	6	4	1	2	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0009	2026	13	2	4	4	1	2	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0010	2023	11	2	0	2	1	6	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0011	2027	10	0	3	6	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0012	2027	9	1	6	0	0	2	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0013	2026	8	0	3	5	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0014	2026	8	3	0	4	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0015	2026	6	0	2	4	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/1	t0016	2027	6	1	3	0	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0017	2027	6	6	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0018	2027	6	0	3	1	0	2	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0019	2026	5	4	1	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0020	2026	5	5	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0021	2026	5	0	0	4	1	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0022	2027	5	0	3	1	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0023	2027	5	0	1	4	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0024	2026	5	0	0	4	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0025	2026	5	4	0	1	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0026	2026	4	4	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0027	2026	4	0	0	3	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0028	2026	4	0	0	2	2	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0029	2027	4	1	3	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0030	2027	4	0	0	4	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0031	2026	4	0	1	3	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0032	2023	4	1	1	0	1	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0033	2023	3	0	2	1	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0034	2026	3	3	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0035	2024	3	0	2	0	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0036	2027	3	0	0	3	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0037	2027	3	0	0	3	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0038	2026	3	2	0	0	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0039	2026	3	0	0	3	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0040	2026	2	0	0	1	1	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0041	2026	2	0	0	2	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0042	2027	2	1	1	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0043	2027	2	2	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0044	2027	2	0	0	2	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0045	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0046	2023	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0047	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0048	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0049	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0050	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0051	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0052	2026	1	0	0	1	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0053	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526