JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
UTS2B_chr3_191262168_191335526	0/0	t0054	2026	1	0	1	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0055	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0056	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0057	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0058	2026	1	0	0	1	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0059	2026	1	0	0	1	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0060	2026	1	0	0	1	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0061	2026	1	0	0	0	1	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0062	2047	1	0	1	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0063	2027	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0064	2027	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0065	2024	1	0	0	0	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0066	2027	1	0	0	0	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0067	2027	1	0	0	1	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0068	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0069	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0070	2026	1	0	0	0	0	1	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0071	2026	1	0	0	1	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0072	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0073	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	1/0	t0074	2026	1	0	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0075	2023	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2B_chr3_191262168_191335526	0/0	t0076	2026	1	1	0	0	0	0	copy fasta	UTS2B	chr3	191262168	191335526
UTS2R_chr17_82366765_82382458	1/0	t0001	2516	157	36	23	81	6	10	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0002	2516	81	13	16	39	3	10	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/1	t0003	2516	57	0	5	32	3	16	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0004	2516	27	4	15	0	3	5	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0005	2516	8	8	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0006	2516	6	0	6	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0007	2516	6	5	1	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0008	2516	4	4	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0009	2516	4	4	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0010	2516	4	4	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0011	2516	4	4	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0012	2516	3	3	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0013	2502	2	0	0	2	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0014	2516	2	0	0	2	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0015	2516	2	0	0	0	0	2	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0016	2516	2	0	2	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0017	2516	1	1	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0018	2516	1	0	1	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0019	2516	1	1	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0020	2516	1	1	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0021	2516	1	1	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0022	2516	1	0	1	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0023	2516	1	0	0	0	1	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0024	2516	1	0	0	0	0	1	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0025	2516	1	0	1	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0026	2516	1	0	1	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458
UTS2R_chr17_82366765_82382458	0/0	t0027	2516	1	1	0	0	0	0	copy fasta	UTS2R	chr17	82366765	82382458