JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
WNT7A_chr3_13811258_13885071	0/0	t0116	2936	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0117	2936	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0118	2936	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0119	2936	1	0	0	0	0	1	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0120	2936	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0121	2938	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0122	2940	1	0	0	0	0	1	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0123	2942	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0124	2944	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0125	2930	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0126	2912	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0127	2933	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0128	2933	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0129	2933	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0130	2933	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0131	2937	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0132	2937	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0133	2933	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0134	2935	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0135	2936	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0136	2937	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0137	2937	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0138	2937	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0139	2939	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0140	2934	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0141	2934	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0142	2938	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0143	2938	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0144	2938	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0145	2938	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0146	2935	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0147	2943	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0148	2934	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0149	2934	1	0	0	0	0	1	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0150	2934	1	0	0	0	1	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0151	2934	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0152	2938	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0153	2938	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0154	2938	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0155	2940	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/1	t0156	2940	1	0	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0157	2944	1	0	0	0	1	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0158	2944	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0159	2944	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0160	2946	1	0	0	1	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0161	2946	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0162	2946	1	0	0	0	0	1	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0163	2946	1	0	1	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0164	2946	1	0	0	0	0	1	copy fasta	WNT7A	chr3	13811258	13885071
WNT7A_chr3_13811258_13885071	0/0	t0165	2950	1	1	0	0	0	0	copy fasta	WNT7A	chr3	13811258	13885071