JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
ZBTB16_chr11_114054711_114261765	0/0	t0042	6477	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0043	6474	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0044	6474	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0045	6475	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0046	6466	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0047	6476	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0048	6474	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0049	6473	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0050	6476	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0051	6472	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0052	6477	1	0	0	0	1	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0053	6476	1	0	0	0	1	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0054	6475	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0055	6475	1	0	0	0	1	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0056	6476	1	0	0	0	1	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0057	6475	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0058	6476	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0059	6476	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0060	6476	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0061	6473	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0062	6474	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0063	6478	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0064	6466	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0065	6472	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0066	6472	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0067	6475	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0068	6473	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0069	6474	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0070	6475	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0071	6477	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0072	6466	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0073	6474	1	0	0	0	1	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0074	6473	1	0	0	0	1	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0075	6474	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0076	6475	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0077	6474	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0078	6474	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0079	6473	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0080	6474	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0081	6475	1	0	0	0	1	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0082	6474	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0083	6474	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0084	6478	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0085	6475	1	0	0	1	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0086	6475	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0087	6476	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0088	6479	1	0	0	0	1	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0089	6467	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0090	6474	1	0	1	0	0	copy fasta	ZBTB16	chr11	114054711	114261765
ZBTB16_chr11_114054711_114261765	0/0	t0091	6476	1	1	0	0	0	copy fasta	ZBTB16	chr11	114054711	114261765