JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZBTB7C_chr18_48021672_48414383	0/0	t0014	3051	3	3	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0015	3052	2	2	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0016	3051	2	2	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0017	3050	1	0	0	0	0	1	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0018	3050	1	0	1	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0019	3053	1	0	0	0	0	1	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0020	3051	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0021	3052	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0022	3051	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0023	3052	1	0	0	1	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0024	3050	1	0	0	0	0	1	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0025	3050	1	0	0	0	1	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0026	3052	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0027	3051	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0028	3050	1	0	0	0	0	1	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0029	3050	1	0	1	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0030	3053	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0031	3054	1	0	1	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0032	3054	1	0	0	1	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0033	3054	1	0	1	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0034	3053	1	0	0	1	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0035	3055	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0036	3053	1	0	0	1	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0037	3052	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0038	3051	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0039	3050	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0040	3051	1	0	1	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0041	3050	1	0	1	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0042	3051	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0043	3052	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0044	3053	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0045	3055	1	0	1	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0046	3053	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB7C_chr18_48021672_48414383	0/0	t0047	3055	1	1	0	0	0	0	copy fasta	ZBTB7C	chr18	48021672	48414383
ZBTB8A_chr1_32534427_32610941	1/0	t0001	5751	62	3	12	33	7	6	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/1	t0002	5751	43	21	6	4	1	10	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0003	5749	7	1	1	4	0	1	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0004	5752	7	1	1	4	1	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0005	5752	7	0	3	3	1	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0006	5761	5	2	3	0	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0007	5749	5	0	5	0	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0008	5750	5	0	0	5	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0009	5755	5	5	0	0	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0010	5753	5	2	0	3	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0011	5750	4	0	2	2	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0012	5738	4	0	0	4	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0013	5758	4	3	1	0	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0014	5753	4	0	2	2	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0015	5753	4	0	2	2	0	0	copy fasta	ZBTB8A	chr1	32534427	32610941
ZBTB8A_chr1_32534427_32610941	0/0	t0016	5752	4	0	0	3	0	1	copy fasta	ZBTB8A	chr1	32534427	32610941