JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF207_chr17_32345157_32386885	0/0	t0028	12255	2	0	1	0	1	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0029	12254	2	0	0	0	2	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0030	12223	2	2	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0031	12257	2	2	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0032	12257	2	2	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0033	12264	2	2	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0034	12225	2	2	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0035	12256	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0036	12256	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0037	12257	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0038	12257	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0039	12255	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0040	12256	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0041	12257	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0042	12256	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0043	12257	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0044	12264	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0045	12256	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0046	12256	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0047	12256	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0048	12256	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0049	12256	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0050	12256	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0051	12256	1	0	0	0	0	1	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0052	12256	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0053	12256	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/1	t0054	12256	1	0	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0055	12256	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0056	12256	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0057	12257	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0058	12257	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0059	12256	1	0	0	0	0	1	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0060	12252	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0061	12256	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0062	12257	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0063	12257	1	0	0	0	0	1	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0064	12253	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0065	12257	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0066	12257	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0067	12256	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0068	12256	1	0	0	1	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0069	12223	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0070	12225	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0071	12257	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0072	12258	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0073	12257	1	1	0	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0074	12258	1	0	1	0	0	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0075	12226	1	0	0	0	1	0	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0076	12256	1	0	0	0	0	1	copy fasta	ZNF207	chr17	32345157	32386885
ZNF207_chr17_32345157_32386885	0/0	t0077	12257	1	0	0	0	0	1	copy fasta	ZNF207	chr17	32345157	32386885