JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF26_chr12_132981367_133032102	0/0	t0134	16097	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0135	16088	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0136	16088	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0137	16088	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0138	16088	1	0	0	0	1	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0139	16096	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0140	16090	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0141	16097	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0142	16098	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0143	16096	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0144	16088	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0145	16090	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0146	16090	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0147	16091	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0148	16088	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0149	16088	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0150	16090	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0151	16087	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0152	16088	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0153	16088	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0154	16088	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0155	16088	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0156	16088	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0157	16098	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0158	16091	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0159	16092	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0160	16089	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0161	16089	1	0	0	0	0	1	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0162	16090	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0163	16099	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0164	16099	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0165	16092	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0166	16092	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0167	16100	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0168	16091	1	0	0	0	1	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0169	16105	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0170	16098	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0171	16088	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0172	16088	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0173	16097	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0174	16078	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0175	16080	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0176	16088	1	1	0	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0177	16094	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0178	16098	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0179	16099	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0180	16099	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0181	16099	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0182	16097	1	0	1	0	0	0	copy fasta	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	t0183	16100	1	0	0	1	0	0	copy fasta	ZNF26	chr12	132981367	133032102