JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
C2CD4C_chr19_400445_414147	0/0	t0042	1835	2	0	2	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0043	1834	2	2	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0044	1839	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0045	1840	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0046	1835	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0047	1839	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0048	1834	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0049	1834	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0050	1834	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0051	1834	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0052	1834	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0053	1834	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0054	1834	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0055	1834	1	0	1	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0056	1834	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0057	1834	1	0	1	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0058	1834	1	0	1	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0059	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0060	1835	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0061	1834	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0062	1839	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0063	1834	1	0	1	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0064	1834	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0065	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0066	1834	1	0	1	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0067	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0068	1834	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0069	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0070	1835	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0071	1834	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0072	1834	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0073	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0074	1834	1	0	0	0	1	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0075	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0076	1834	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0077	1835	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0078	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0079	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0080	1834	1	0	0	1	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0081	1834	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0082	1834	1	0	1	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0083	1835	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0084	1834	1	0	0	0	0	1	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0085	1834	1	0	1	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0086	1834	1	0	1	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0087	1838	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0088	1837	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0089	1837	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0090	1837	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147
C2CD4C_chr19_400445_414147	0/0	t0091	1837	1	1	0	0	0	0	copy fasta	C2CD4C	chr19	400445	414147