JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF618_chr9_113871309_114061593	0/0	t0079	6500	1	0	0	0	0	1	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0080	6499	1	0	1	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0081	6499	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0082	6499	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0083	6499	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0084	6500	1	0	1	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0085	6499	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0086	6500	1	0	1	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0087	6500	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0088	6499	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0089	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0090	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0091	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0092	6498	1	0	1	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0093	6497	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0094	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0095	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0096	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0097	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0098	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0099	6498	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0100	6497	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0101	6495	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0102	6495	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0103	6495	1	0	1	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0104	6491	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0105	6491	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0106	6492	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0107	6491	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0108	6491	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0109	6491	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0110	6491	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0111	6500	1	0	1	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0112	6499	1	0	1	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0113	6499	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0114	6499	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0115	6497	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0116	6497	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0117	6490	1	1	0	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0118	6490	1	0	0	0	0	1	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0119	6502	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0120	6504	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0121	6501	1	0	0	0	1	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0122	6502	1	0	1	0	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0123	6502	1	0	0	0	1	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0124	6500	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0125	6500	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0126	6500	1	0	0	0	0	1	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0127	6499	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	t0128	6501	1	0	0	1	0	0	copy fasta	ZNF618	chr9	113871309	114061593