Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF701_chr19_52565287_52592174	0/0	t0121	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0122	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0123	3833	1	0	0	0	1	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0124	3834	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0125	3833	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0126	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0127	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0128	3834	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0129	3834	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0130	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0131	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0132	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0133	3833	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0134	3833	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0135	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0136	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0137	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0138	3833	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0139	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0140	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0141	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0142	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0143	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0144	3832	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0145	3833	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0146	3833	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0147	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0148	3833	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0149	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0150	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0151	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0152	3848	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0153	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0154	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0155	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0156	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0157	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0158	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0159	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0160	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0161	3847	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0162	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0163	3833	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0164	3833	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0165	3834	1	0	1	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0166	3834	1	0	0	1	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0167	3848	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0168	3848	1	0	0	0	1	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0169	3848	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	t0170	3848	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174