Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF736_chr7_64308961_64361634	0/0	t0042	7683	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0043	7684	1	0	1	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0044	7684	1	0	0	0	0	1	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0045	7682	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0046	7682	1	0	0	0	0	1	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0047	7682	1	0	0	0	1	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0048	7683	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0049	7694	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0050	7694	1	0	0	0	1	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0051	7694	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/1	t0052	7694	1	0	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0053	7694	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0054	7694	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0055	7694	1	0	0	0	0	1	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0056	7699	1	0	0	0	0	1	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0057	7704	1	0	1	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0058	7693	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0059	7698	1	0	1	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0060	7684	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0061	7684	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0062	7694	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0063	7698	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0064	7704	1	0	1	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0065	7685	1	0	1	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0066	7689	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0067	7688	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0068	7689	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0069	7689	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0070	7689	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0071	7689	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0072	7684	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0073	7694	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0074	7676	1	0	0	0	0	1	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0075	7676	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0076	7676	1	0	1	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0077	7678	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0078	7678	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0079	7678	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0080	7678	1	0	0	0	0	1	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0081	7678	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0082	7678	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0083	7694	1	0	0	1	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0084	7694	1	1	0	0	0	0	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0085	7684	1	0	0	0	0	1	copy fasta	ZNF736	chr7	64308961	64361634
ZNF736_chr7_64308961_64361634	0/0	t0086	7684	1	0	0	0	0	1	copy fasta	ZNF736	chr7	64308961	64361634
ZNF737_chr19_20532992_20570781	0/0	t0001	6749	103	15	23	49	6	10	copy fasta	ZNF737	chr19	20532992	20570781
ZNF737_chr19_20532992_20570781	0/1	t0002	6742	68	0	21	32	5	9	copy fasta	ZNF737	chr19	20532992	20570781
ZNF737_chr19_20532992_20570781	0/0	t0003	6749	32	0	1	30	1	0	copy fasta	ZNF737	chr19	20532992	20570781
ZNF737_chr19_20532992_20570781	0/0	t0004	6748	18	5	10	0	1	2	copy fasta	ZNF737	chr19	20532992	20570781
ZNF737_chr19_20532992_20570781	0/0	t0005	6743	15	14	1	0	0	0	copy fasta	ZNF737	chr19	20532992	20570781