Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
ZNF766_chr19_52264587_52301046	0/0	t0018	4877	4	3	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0019	4877	4	0	0	4	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0020	4870	3	2	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0021	4869	3	0	0	3	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0022	4869	3	0	0	3	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0023	4876	3	3	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0024	4876	3	0	0	3	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0025	4876	2	2	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0026	4868	2	1	0	0	1	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0027	4875	2	0	0	0	2	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0028	4867	2	0	0	2	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0029	4878	2	0	0	2	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0030	4875	2	0	0	2	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0031	4877	2	0	0	1	1	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0032	4876	2	0	0	2	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0033	4879	2	2	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0034	4875	2	1	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0035	4876	2	0	0	0	2	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0036	4876	1	1	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0037	4868	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0038	4868	1	1	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0039	4868	1	1	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0040	4876	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0041	4874	1	0	0	0	1	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0042	4870	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0043	4876	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0044	4877	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0045	4877	1	0	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0046	4868	1	0	0	0	1	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0047	4875	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0048	4876	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0049	4874	1	0	0	0	1	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0050	4865	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0051	4877	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0052	4866	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0053	4873	1	0	0	0	1	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0054	4879	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0055	4875	1	0	0	0	1	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0056	4876	1	0	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0057	4876	1	0	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0058	4875	1	0	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0059	4876	1	0	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0060	4877	1	1	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0061	4876	1	0	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0062	4873	1	1	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0063	4876	1	0	1	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0064	4876	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0065	4875	1	1	0	0	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0066	4869	1	0	0	1	0	copy fasta	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	t0067	4876	1	0	0	0	1	copy fasta	ZNF766	chr19	52264587	52301046