Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF778_chr16_89212703_89242141	0/0	t0103	8889	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0104	8825	1	0	1	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0105	8825	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0106	8825	1	0	1	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0107	8825	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0108	8803	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0109	8889	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0110	8804	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0111	8804	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0112	8758	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0113	8824	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0114	8779	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0115	8825	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0116	8826	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0117	8802	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0118	8825	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0119	8803	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0120	8852	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0121	8855	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0122	8855	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0123	8857	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0124	8853	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0125	8857	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0126	8856	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0127	8901	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0128	8855	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0129	8855	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0130	8820	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0131	8857	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0132	8853	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0133	8825	1	0	0	0	1	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0134	8781	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0135	8820	1	0	1	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0136	8822	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0137	8819	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0138	8820	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0139	8820	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0140	8820	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0141	8820	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0142	8820	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0143	8820	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0144	8872	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0145	8820	1	0	1	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0146	8820	1	0	0	1	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0147	8802	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0148	8802	1	0	1	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0149	8802	1	0	0	0	0	1	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0150	8851	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0151	8825	1	1	0	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141
ZNF778_chr16_89212703_89242141	0/0	t0152	8824	1	0	1	0	0	0	copy fasta	ZNF778	chr16	89212703	89242141