Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF7_chr8_144822560_144848772	0/0	t0029	699	3	2	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0030	700	3	3	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0031	697	3	1	0	2	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0032	697	3	3	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0033	698	3	1	1	0	0	1	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0034	698	3	3	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0035	698	3	3	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0036	698	2	0	1	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0037	699	2	0	0	2	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0038	698	2	0	1	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0039	699	2	0	2	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0040	699	2	0	2	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0041	699	2	0	1	0	0	1	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/1	t0042	699	2	0	1	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0043	698	2	2	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0044	699	2	0	0	0	0	2	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0045	699	2	0	0	2	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0046	698	2	0	0	2	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0047	698	2	2	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0048	698	2	1	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0049	697	2	0	0	1	0	1	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0050	699	2	0	0	2	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0051	697	2	2	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0052	699	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0053	697	1	0	1	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0054	699	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0055	698	1	0	1	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0056	698	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0057	700	1	0	0	0	0	1	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0058	698	1	0	0	0	0	1	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0059	697	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0060	699	1	0	1	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0061	697	1	1	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0062	698	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0063	699	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0064	700	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0065	698	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0066	699	1	0	0	0	1	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0067	698	1	1	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0068	700	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0069	698	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0070	698	1	1	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0071	697	1	0	1	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0072	697	1	0	0	0	0	1	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0073	698	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0074	697	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0075	698	1	0	1	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0076	698	1	1	0	0	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0077	699	1	0	0	1	0	0	copy fasta	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	t0078	700	1	0	0	0	0	1	copy fasta	ZNF7	chr8	144822560	144848772