JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
CABP5_chr19_48024383_48049079	0/0	t0016	1344	4	1	0	3	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0017	1334	4	3	1	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0018	1350	4	0	0	3	0	1	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0019	1336	3	1	0	2	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0020	1335	3	2	0	1	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0021	1342	2	2	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0022	1346	2	2	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0023	1340	2	2	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0024	1352	2	0	1	0	0	1	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0025	1354	2	0	0	0	0	2	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0026	1352	2	0	0	0	0	2	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0027	1350	2	0	1	0	0	1	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0028	1324	2	0	2	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0029	1346	2	1	1	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0030	1344	2	1	1	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0031	1346	2	2	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0032	1340	2	0	1	0	0	1	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/1	t0033	1338	2	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0034	1336	2	0	1	0	0	1	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0035	1320	2	2	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0036	1346	2	2	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0037	1330	2	2	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0038	1332	2	0	0	0	0	2	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0039	1343	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0040	1348	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0041	1332	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0042	1356	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0043	1352	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0044	1344	1	0	1	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0045	1340	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0046	1330	1	0	1	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0047	1352	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0048	1334	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0049	1330	1	0	1	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0050	1345	1	0	0	0	1	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0051	1345	1	0	0	1	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0052	1354	1	0	1	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0053	1350	1	0	0	0	1	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0054	1346	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0055	1344	1	0	0	0	1	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0056	1334	1	0	0	1	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0057	1350	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0058	1332	1	0	0	1	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0059	1352	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0060	1350	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0061	1340	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0062	1330	1	0	0	1	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0063	1334	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0064	1332	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	t0065	1344	1	1	0	0	0	0	copy fasta	CABP5	chr19	48024383	48049079