Joint Open Genome and Omics Platform (JoGo)

Search by Gene

geneid	3222
ensemblid	ENSG00000172789.4
hgncid	5127
symbol	HOXC5
name	homeobox C5
refseq_nuc	NM_018953.4
refseq_prot	NP_061826.1
ensembl_nuc	ENST00000312492.3
ensembl_prot	ENSP00000309336.2
mane_status	MANE Select
chr	chr12
start	54033050
end	54035361
strand	+
ver	v1.2
region	chr12:54033050-54035361
region5000	chr12:54028050-54040361
regionname0	HOXC5_chr12_54033050_54035361
regionname5000	HOXC5_chr12_54028050_54040361

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	aa
a0001	1/1	222	411	87	78	186	16	42	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0002	0/0	222	3	3	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq
c0001	1/1	669	409	85	78	186	16	42	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
c0002	0/0	669	3	3	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
c0003	0/0	669	2	2	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta

thapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq
t0001	1/0	943	184	55	39	57	8	24	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0002	0/1	943	141	19	24	81	7	9	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0003	0/0	943	38	2	0	35	1	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0004	0/0	943	24	0	6	11	0	7	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0005	0/0	943	12	11	1	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0006	0/0	942	6	1	5	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0007	0/0	943	5	0	3	0	0	2	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0008	0/0	943	2	2	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0009	0/0	943	1	0	0	1	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
t0010	0/0	943	1	0	0	1	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename
g0001	1/0	276	79	51	105	9	31	HOXC5_chr12_54028050_54040361	HOXC5
g0002	0/1	135	10	25	81	7	11	HOXC5_chr12_54028050_54040361	HOXC5
g0003	0/0	2	0	2	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5
g0004	0/0	1	1	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5

achapid	ahapid	chapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	acseq
a0001c0001	a0001	c0001	1/1	409	85	78	186	16	42	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0003	a0001	c0003	0/0	2	2	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0002c0002	a0002	c0002	0/0	3	3	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta

acthapid	ahapid	chapid	thapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	actseq
a0001c0001t0001	a0001	c0001	t0001	1/0	181	52	39	57	8	24	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0002	a0001	c0001	t0002	0/1	141	19	24	81	7	9	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0003	a0001	c0001	t0003	0/0	36	0	0	35	1	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0004	a0001	c0001	t0004	0/0	24	0	6	11	0	7	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0005	a0001	c0001	t0005	0/0	12	11	1	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0006	a0001	c0001	t0006	0/0	6	1	5	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0007	a0001	c0001	t0007	0/0	5	0	3	0	0	2	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0008	a0001	c0001	t0008	0/0	2	2	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0009	a0001	c0001	t0009	0/0	1	0	0	1	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0001t0010	a0001	c0001	t0010	0/0	1	0	0	1	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0001c0003t0003	a0001	c0003	t0003	0/0	2	2	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta
a0002c0002t0001	a0002	c0002	t0001	0/0	3	3	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5	copy fasta

actghapid	ahapid	chapid	thapid	ghapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename
a0001c0001t0001g0001	a0001	c0001	t0001	g0001	1/0	179	52	37	57	8	24	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0001g0003	a0001	c0001	t0001	g0003	0/0	2	0	2	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0002g0001	a0001	c0001	t0002	g0001	0/0	11	9	2	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0002g0002	a0001	c0001	t0002	g0002	0/1	130	10	22	81	7	9	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0003g0001	a0001	c0001	t0003	g0001	0/0	36	0	0	35	1	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0004g0001	a0001	c0001	t0004	g0001	0/0	24	0	6	11	0	7	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0005g0001	a0001	c0001	t0005	g0001	0/0	11	10	1	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0005g0004	a0001	c0001	t0005	g0004	0/0	1	1	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0006g0001	a0001	c0001	t0006	g0001	0/0	6	1	5	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0007g0002	a0001	c0001	t0007	g0002	0/0	5	0	3	0	0	2	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0008g0001	a0001	c0001	t0008	g0001	0/0	2	2	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0009g0001	a0001	c0001	t0009	g0001	0/0	1	0	0	1	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0001t0010g0001	a0001	c0001	t0010	g0001	0/0	1	0	0	1	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0001c0003t0003g0001	a0001	c0003	t0003	g0001	0/0	2	2	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5
a0002c0002t0001g0001	a0002	c0002	t0001	g0001	0/0	3	3	0	0	0	0	HOXC5_chr12_54028050_54040361	HOXC5

sampleid	haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	HOXC5_chr12_54028050_54040361	HOXC5
HG00099	hp2	a0001	c0001	t0002	g0002	EUR	GBR	HOXC5_chr12_54028050_54040361	HOXC5
HG00140	hp1	a0001	c0001	t0002	g0002	EUR	GBR	HOXC5_chr12_54028050_54040361	HOXC5
HG00140	hp2	a0001	c0001	t0002	g0002	EUR	GBR	HOXC5_chr12_54028050_54040361	HOXC5
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	HOXC5_chr12_54028050_54040361	HOXC5
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	HOXC5_chr12_54028050_54040361	HOXC5
HG00323	hp1	a0001	c0001	t0002	g0002	EUR	FIN	HOXC5_chr12_54028050_54040361	HOXC5
HG00323	hp2	a0001	c0001	t0003	g0001	EUR	FIN	HOXC5_chr12_54028050_54040361	HOXC5
HG00423	hp1	a0001	c0001	t0003	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00423	hp2	a0001	c0001	t0002	g0002	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00438	hp1	a0001	c0001	t0004	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00438	hp2	a0001	c0001	t0002	g0002	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00544	hp2	a0001	c0001	t0003	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00558	hp1	a0001	c0001	t0002	g0002	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00558	hp2	a0001	c0001	t0002	g0002	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00597	hp1	a0001	c0001	t0009	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00597	hp2	a0001	c0001	t0003	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00609	hp1	a0001	c0001	t0003	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00609	hp2	a0001	c0001	t0002	g0002	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00621	hp1	a0001	c0001	t0003	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00621	hp2	a0001	c0001	t0003	g0001	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00642	hp1	a0001	c0001	t0006	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00642	hp2	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00673	hp1	a0001	c0001	t0002	g0002	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00673	hp2	a0001	c0001	t0002	g0002	EAS	CHS	HOXC5_chr12_54028050_54040361	HOXC5
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00735	hp1	a0001	c0001	t0004	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00738	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00741	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01069	hp1	a0001	c0001	t0001	g0003	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01070	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01070	hp2	a0001	c0001	t0007	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01071	hp1	a0001	c0001	t0007	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01071	hp2	a0001	c0001	t0001	g0003	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01106	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01109	hp1	a0001	c0001	t0005	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01167	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01167	hp2	a0001	c0001	t0002	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01169	hp1	a0001	c0001	t0002	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01175	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01192	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01243	hp2	a0001	c0001	t0002	g0002	AMR	PUR	HOXC5_chr12_54028050_54040361	HOXC5
HG01255	hp1	a0001	c0001	t0004	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01255	hp2	a0001	c0001	t0002	g0002	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01256	hp1	a0001	c0001	t0002	g0002	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01258	hp2	a0001	c0001	t0002	g0002	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01346	hp2	a0001	c0001	t0007	g0002	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01358	hp1	a0001	c0001	t0004	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01358	hp2	a0001	c0001	t0002	g0002	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01496	hp2	a0001	c0001	t0006	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01515	hp1	a0001	c0001	t0002	g0002	EUR	IBS	HOXC5_chr12_54028050_54040361	HOXC5
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	HOXC5_chr12_54028050_54040361	HOXC5
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	HOXC5_chr12_54028050_54040361	HOXC5
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	HOXC5_chr12_54028050_54040361	HOXC5
HG01517	hp1	a0001	c0001	t0002	g0002	EUR	IBS	HOXC5_chr12_54028050_54040361	HOXC5
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	HOXC5_chr12_54028050_54040361	HOXC5
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG01884	hp2	a0001	c0001	t0005	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG01928	hp1	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01934	hp1	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01943	hp1	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01943	hp2	a0001	c0001	t0006	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01952	hp1	a0001	c0001	t0004	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01952	hp2	a0001	c0001	t0006	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01975	hp1	a0001	c0001	t0004	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01975	hp2	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01978	hp2	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01981	hp1	a0001	c0001	t0006	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01981	hp2	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG02004	hp1	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG02004	hp2	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG02015	hp1	a0001	c0001	t0003	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02015	hp2	a0001	c0001	t0003	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02027	hp1	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02027	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02040	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02055	hp2	a0001	c0001	t0002	g0002	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02056	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02071	hp1	a0001	c0001	t0003	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02071	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02074	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02080	hp1	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02083	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02129	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02132	hp1	a0001	c0001	t0003	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02132	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02135	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC5_chr12_54028050_54040361	HOXC5
HG02145	hp1	a0001	c0001	t0002	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG02148	hp2	a0001	c0001	t0002	g0002	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG02155	hp1	a0001	c0001	t0002	g0002	EAS	CDX	HOXC5_chr12_54028050_54040361	HOXC5
HG02155	hp2	a0001	c0001	t0003	g0001	EAS	CDX	HOXC5_chr12_54028050_54040361	HOXC5
HG02165	hp1	a0001	c0001	t0003	g0001	EAS	CDX	HOXC5_chr12_54028050_54040361	HOXC5
HG02165	hp2	a0001	c0001	t0002	g0002	EAS	CDX	HOXC5_chr12_54028050_54040361	HOXC5
HG02257	hp1	a0002	c0002	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02257	hp2	a0001	c0001	t0002	g0002	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02258	hp1	a0001	c0001	t0002	g0002	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02258	hp2	a0001	c0001	t0002	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02273	hp1	a0001	c0001	t0004	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXC5_chr12_54028050_54040361	HOXC5
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02451	hp2	a0001	c0001	t0002	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02572	hp2	a0001	c0003	t0003	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG02615	hp1	a0001	c0001	t0008	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02615	hp2	a0001	c0001	t0008	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02630	hp2	a0001	c0001	t0002	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02647	hp2	a0001	c0001	t0002	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG02683	hp2	a0001	c0001	t0007	g0002	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02886	hp1	a0001	c0001	t0002	g0002	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02886	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02896	hp2	a0001	c0001	t0005	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02897	hp1	a0001	c0001	t0005	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG02922	hp2	a0001	c0001	t0002	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG02965	hp1	a0001	c0001	t0005	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG02970	hp1	a0001	c0001	t0005	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG02976	hp2	a0001	c0001	t0005	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03017	hp2	a0001	c0001	t0002	g0002	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03130	hp1	a0001	c0001	t0005	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03130	hp2	a0002	c0002	t0001	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03139	hp1	a0001	c0001	t0002	g0002	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03139	hp2	a0001	c0001	t0005	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03209	hp1	a0001	c0001	t0002	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03209	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03225	hp2	a0001	c0001	t0005	g0004	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03486	hp1	a0001	c0001	t0002	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03490	hp1	a0001	c0001	t0002	g0002	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03491	hp2	a0001	c0001	t0002	g0002	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03492	hp1	a0001	c0001	t0002	g0002	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03492	hp2	a0001	c0001	t0002	g0002	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03516	hp2	a0001	c0001	t0002	g0002	AFR	ESN	HOXC5_chr12_54028050_54040361	HOXC5
HG03540	hp1	a0002	c0002	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HOXC5_chr12_54028050_54040361	HOXC5
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03669	hp1	a0001	c0001	t0002	g0002	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03704	hp2	a0001	c0001	t0004	g0001	SAS	PJL	HOXC5_chr12_54028050_54040361	HOXC5
HG03831	hp1	a0001	c0001	t0004	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG03927	hp2	a0001	c0001	t0004	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG04115	hp1	a0001	c0001	t0004	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG04184	hp1	a0001	c0001	t0004	g0001	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG04184	hp2	a0001	c0001	t0002	g0002	SAS	BEB	HOXC5_chr12_54028050_54040361	HOXC5
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG04199	hp2	a0001	c0001	t0002	g0002	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG04204	hp1	a0001	c0001	t0004	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG04228	hp1	a0001	c0001	t0004	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	HOXC5_chr12_54028050_54040361	HOXC5
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	HOXC5_chr12_54028050_54040361	HOXC5
NA18522	hp2	a0001	c0001	t0005	g0001	AFR	YRI	HOXC5_chr12_54028050_54040361	HOXC5
NA18612	hp1	a0001	c0001	t0002	g0002	EAS	CHB	HOXC5_chr12_54028050_54040361	HOXC5
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	HOXC5_chr12_54028050_54040361	HOXC5
NA18747	hp1	a0001	c0001	t0002	g0002	EAS	CHB	HOXC5_chr12_54028050_54040361	HOXC5
NA18747	hp2	a0001	c0001	t0002	g0002	EAS	CHB	HOXC5_chr12_54028050_54040361	HOXC5
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	HOXC5_chr12_54028050_54040361	HOXC5
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	HOXC5_chr12_54028050_54040361	HOXC5
NA18939	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18939	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18940	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18942	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18942	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18943	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18943	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18944	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18944	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18945	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18945	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18946	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18947	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18948	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18948	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18949	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18953	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18959	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18961	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18961	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18962	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18962	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18964	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18964	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18965	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18967	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18967	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18968	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18969	hp2	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18970	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18971	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18971	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18973	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18975	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18976	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18976	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18977	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18977	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18978	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18979	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18979	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18980	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18980	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18981	hp2	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18983	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18984	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18985	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18985	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18986	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18987	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18987	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18988	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18988	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18989	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18992	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18995	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18998	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18998	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18999	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19000	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19000	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19001	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19001	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19004	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19005	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19009	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19010	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19012	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	HOXC5_chr12_54028050_54040361	HOXC5
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	HOXC5_chr12_54028050_54040361	HOXC5
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	HOXC5_chr12_54028050_54040361	HOXC5
NA19043	hp2	a0001	c0001	t0002	g0002	AFR	LWK	HOXC5_chr12_54028050_54040361	HOXC5
NA19054	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19054	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19055	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19056	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19057	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19057	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19063	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19065	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19065	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19066	hp1	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19070	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19070	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19072	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19072	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19074	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19075	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19075	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19076	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19076	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19077	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19079	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19079	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19080	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19084	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19088	hp2	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19090	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19091	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19091	hp2	a0001	c0001	t0010	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA19240	hp1	a0001	c0001	t0005	g0001	AFR	YRI	HOXC5_chr12_54028050_54040361	HOXC5
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	HOXC5_chr12_54028050_54040361	HOXC5
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	HOXC5_chr12_54028050_54040361	HOXC5
NA20129	hp2	a0001	c0001	t0006	g0001	AFR	ASW	HOXC5_chr12_54028050_54040361	HOXC5
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	HOXC5_chr12_54028050_54040361	HOXC5
NA20752	hp2	a0001	c0001	t0002	g0002	EUR	TSI	HOXC5_chr12_54028050_54040361	HOXC5
NA20905	hp1	a0001	c0001	t0007	g0002	SAS	GIH	HOXC5_chr12_54028050_54040361	HOXC5
NA20905	hp2	a0001	c0001	t0002	g0002	SAS	GIH	HOXC5_chr12_54028050_54040361	HOXC5
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXC5_chr12_54028050_54040361	HOXC5
HG02109	hp1	a0001	c0003	t0003	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02486	hp1	a0001	c0001	t0002	g0002	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXC5_chr12_54028050_54040361	HOXC5
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG03471	hp2	a0001	c0001	t0002	g0001	AFR	MSL	HOXC5_chr12_54028050_54040361	HOXC5
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	HOXC5_chr12_54028050_54040361	HOXC5
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	HOXC5_chr12_54028050_54040361	HOXC5
NA18955	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA18955	hp2	a0001	c0001	t0003	g0001	EAS	JPT	HOXC5_chr12_54028050_54040361	HOXC5
NA20300	hp1	a0001	c0001	t0002	g0002	AFR	USA	HOXC5_chr12_54028050_54040361	HOXC5
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	HOXC5_chr12_54028050_54040361	HOXC5
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	HOXC5_chr12_54028050_54040361	HOXC5
NA21309	hp2	a0001	c0001	t0002	g0002	AFR	LWK	HOXC5_chr12_54028050_54040361	HOXC5
homoSapiens_chm13v2	hp1	a0001	c0001	t0002	g0002	REF	REF	HOXC5_chr12_54028050_54040361	HOXC5
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	HOXC5_chr12_54028050_54040361	HOXC5

chr:pos	ref	alt	# # of ahapid:amio-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna_pos_length	cds_pos_length	aa_pos_length	distance	status	chr	pos
chr12:54033155	G G	C C	1	a0002 a0002	3	HG02257.hp1 HG03130.hp2 HG03540.hp1 HG02257.hp1 HG03130.hp2 HG03540.hp1	missense_variant	MODERATE	c.33G>C c.33G>C	p.Lys11Asn p.Lys11Asn	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	1/2	106/1611	33/669	11/222			chr12	54033155

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna_pos_length	cds_pos_length	aa_pos_length	distance	status	chr	pos
chr12:54033359	G G	A A	1	a0001c0003 a0001c0003	2	HG02109.hp1 HG02572.hp2 HG02109.hp1 HG02572.hp2	synonymous_variant	LOW	c.237G>A c.237G>A	p.Ala79Ala p.Ala79Ala	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	1/2	310/1611	237/669	79/222			chr12	54033359

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr12:54033101	AT AT	A A	1	a0001c0001t0006 a0001c0001t0006	6	HG00642.hp1 HG01496.hp2 HG01943.hp2 others(3): Show HG00642.hp1 HG01496.hp2 HG01943.hp2 HG01952.hp2 HG01981.hp1 NA20129.hp2	5_prime_UTR_variant	MODIFIER	c.-15delT c.-15delT	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	1/2	15	INFO_REALIGN_3_PRIME	chr12	54033101
chr12:54034580	G G	C C	2	a0001c0001t0005 a0001c0001t0008 a0001c0001t0005 a0001c0001t0008	14	HG01109.hp1 HG01884.hp2 HG02615.hp1 others(11): Show HG01109.hp1 HG01884.hp2 HG02615.hp1 HG02615.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp2 HG03225.hp2 NA18522.hp2 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.88G>C c.88G>C	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	88		chr12	54034580
chr12:54034587	G G	A A	1	a0001c0001t0004 a0001c0001t0004	24	HG00438.hp1 HG00735.hp1 HG01255.hp1 others(21): Show HG00438.hp1 HG00735.hp1 HG01255.hp1 HG01358.hp1 HG01952.hp1 HG01975.hp1 HG02273.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04204.hp1 HG04228.hp1 NA18964.hp1 NA18969.hp2 NA18981.hp2 NA19000.hp1 NA19054.hp1 NA19063.hp1 NA19075.hp1 NA19080.hp1 NA19088.hp2 NA19090.hp1	3_prime_UTR_variant	MODIFIER	c.95G>A c.95G>A	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	95		chr12	54034587
chr12:54034720	C C	T T	2	a0001c0001t0005 a0001c0001t0008 a0001c0001t0005 a0001c0001t0008	14	HG01109.hp1 HG01884.hp2 HG02615.hp1 others(11): Show HG01109.hp1 HG01884.hp2 HG02615.hp1 HG02615.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp2 HG03225.hp2 NA18522.hp2 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.228C>T c.228C>T	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	228		chr12	54034720
chr12:54034748	C C	T T	7	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0003t0003	199	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(196): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01109.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp2 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02486.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03017.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03225.hp2 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03669.hp1 HG04184.hp2 HG04199.hp2 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp2 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp2 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18975.hp1 NA18976.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18983.hp2 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp2 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18992.hp2 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19004.hp2 NA19005.hp2 NA19009.hp2 NA19010.hp1 NA19012.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19070.hp1 NA19070.hp2 NA19072.hp2 NA19074.hp1 NA19075.hp2 NA19076.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19084.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20300.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.256C>T c.256C>T	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	256		chr12	54034748
chr12:54034884	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.392G>T c.392G>T	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	392		chr12	54034884
chr12:54034916	C C	T T	1	a0001c0001t0007 a0001c0001t0007	5	HG01070.hp2 HG01071.hp1 HG01346.hp2 others(2): Show HG01070.hp2 HG01071.hp1 HG01346.hp2 HG02683.hp2 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.424C>T c.424C>T	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	424		chr12	54034916
chr12:54034963	G G	A A	2	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	146	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(143): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp2 HG01515.hp1 HG01517.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02129.hp2 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02486.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02886.hp1 HG02922.hp2 HG03017.hp2 HG03139.hp1 HG03209.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03669.hp1 HG04184.hp2 HG04199.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18940.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18955.hp1 NA18959.hp2 NA18961.hp2 NA18962.hp2 NA18964.hp2 NA18965.hp2 NA18967.hp2 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18975.hp1 NA18976.hp1 NA18977.hp1 NA18977.hp2 NA18979.hp2 NA18980.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18989.hp1 NA18992.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19004.hp2 NA19005.hp2 NA19009.hp2 NA19010.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp2 NA19076.hp1 NA19077.hp2 NA19079.hp1 NA19084.hp1 NA19091.hp1 NA20300.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.471G>A c.471G>A	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	471		chr12	54034963
chr12:54035099	C C	T T	1	a0001c0001t0008 a0001c0001t0008	2	HG02615.hp1 HG02615.hp2 HG02615.hp1 HG02615.hp2	3_prime_UTR_variant	MODIFIER	c.607C>T c.607C>T	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	607		chr12	54035099
chr12:54035132	C C	A A	1	a0001c0001t0009 a0001c0001t0009	1	HG00597.hp1 HG00597.hp1	3_prime_UTR_variant	MODIFIER	c.640C>A c.640C>A	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	2/2	640		chr12	54035132

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr12:54033801	T T	G G	1	a0001c0001t0001g0003 a0001c0001t0001g0003	2	HG01069.hp1 HG01071.hp2 HG01069.hp1 HG01071.hp2	intron_variant	MODIFIER	c.454+225T>G c.454+225T>G	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	1/1	chr12	54033801
chr12:54034225	A A	G G	1	a0001c0001t0005g0004 a0001c0001t0005g0004	1	HG03225.hp2 HG03225.hp2	intron_variant	MODIFIER	c.455-53A>G c.455-53A>G	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	1/1	chr12	54034225
chr12:54034227	C C	A A	2	a0001c0001t0002g0002 a0001c0001t0007g0002 a0001c0001t0002g0002 a0001c0001t0007g0002	135	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(132): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp2 HG01515.hp1 HG01517.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02129.hp2 HG02132.hp2 HG02135.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02486.hp1 HG02683.hp2 HG02886.hp1 HG03017.hp2 HG03139.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03669.hp1 HG04184.hp2 HG04199.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18940.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18955.hp1 NA18959.hp2 NA18961.hp2 NA18962.hp2 NA18964.hp2 NA18965.hp2 NA18967.hp2 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18975.hp1 NA18976.hp1 NA18977.hp1 NA18977.hp2 NA18979.hp2 NA18980.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18989.hp1 NA18992.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19004.hp2 NA19005.hp2 NA19009.hp2 NA19010.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp2 NA19076.hp1 NA19077.hp2 NA19079.hp1 NA19084.hp1 NA19091.hp1 NA20300.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.455-51C>A c.455-51C>A	HOXC5	ENSG00000172789.4	transcript	ENST00000312492.3	protein_coding	1/1	chr12	54034227

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🧬 Gene Summary

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AAmino acid (protein) Level Haplotype Info (Total: 2)

CCoding Level Haplotype Info (Total: 3)

TTranscript Level Haplotype Info (Total: 10)

GGenebody Level Haplotype Info (Total: 4)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 3)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 12)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 15)

Haplotype Details by Sample (Haploid Level) (Total: 414)

AAmino acid (protein) Level Variants (Effect to Protein Coding Variants) (Total: 1)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Variants (5'UTR+3'UTR) (Total: 10)

GGenebody Level Haplotype Variants (Intron) (Total: 3)

Genealogies

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Annotation (Repeats)

Annotation (SNP Array)