Joint Open Genome and Omics Platform (JoGo)

Search by Gene

geneid	135927
ensemblid	ENSG00000165131.8
hgncid	21750
symbol	LLCFC1
name	LLLL and CFNLAS motif containing 1
refseq_nuc	NM_001382496.1
refseq_prot	NP_001369425.1
ensembl_nuc	ENST00000409607.5
ensembl_prot	ENSP00000386450.4
mane_status	MANE Select
chr	chr7
start	142939484
end	142940868
strand	+
ver	v1.2
region	chr7:142939484-142940868
region5000	chr7:142934484-142945868
regionname0	LLCFC1_chr7_142939484_142940868
regionname5000	LLCFC1_chr7_142934484_142945868

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	aa
a0001	0/1	122	272	95	60	70	12	34	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0002	0/0	122	3	2	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0003	0/0	122	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0004	0/0	122	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq
c0001	0/1	369	272	95	60	70	12	34	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
c0002	0/0	369	3	2	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
c0003	0/0	369	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
c0004	0/0	369	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta

thapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq
t0001	0/1	420	194	33	55	60	12	33	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
t0002	0/0	420	69	53	7	9	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
t0003	0/0	420	12	12	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
t0004	0/0	420	1	0	0	1	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
t0005	0/0	420	1	0	0	0	0	1	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename
g0001	0/0	53	5	14	20	5	9	LLCFC1_chr7_142934484_142945868	LLCFC1
g0002	0/0	52	2	15	29	3	3	LLCFC1_chr7_142934484_142945868	LLCFC1
g0003	0/0	41	9	13	5	3	11	LLCFC1_chr7_142934484_142945868	LLCFC1
g0004	0/0	18	10	4	4	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0005	0/1	17	5	5	2	0	4	LLCFC1_chr7_142934484_142945868	LLCFC1
g0006	0/0	12	11	0	1	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0007	0/0	12	5	1	2	1	3	LLCFC1_chr7_142934484_142945868	LLCFC1
g0008	0/0	12	12	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0009	0/0	11	5	5	0	0	1	LLCFC1_chr7_142934484_142945868	LLCFC1
g0010	0/0	9	6	1	1	0	1	LLCFC1_chr7_142934484_142945868	LLCFC1
g0011	0/0	7	4	1	2	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0012	0/0	5	4	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0013	0/0	5	5	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0014	0/0	4	4	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0015	0/0	3	0	0	1	0	2	LLCFC1_chr7_142934484_142945868	LLCFC1
g0016	0/0	2	0	0	2	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0017	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0018	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0019	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0020	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0021	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0022	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0023	0/0	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0024	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0025	0/0	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
g0026	0/0	1	0	0	1	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1

achapid	ahapid	chapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	acseq
a0001c0001	a0001	c0001	0/1	272	95	60	70	12	34	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0002c0002	a0002	c0002	0/0	3	2	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0003c0003	a0003	c0003	0/0	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0004c0004	a0004	c0004	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta

acthapid	ahapid	chapid	thapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	actseq
a0001c0001t0001	a0001	c0001	t0001	0/1	193	33	54	60	12	33	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0001c0001t0002	a0001	c0001	t0002	0/0	65	50	6	9	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0001c0001t0003	a0001	c0001	t0003	0/0	12	12	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0001c0001t0004	a0001	c0001	t0004	0/0	1	0	0	1	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0001c0001t0005	a0001	c0001	t0005	0/0	1	0	0	0	0	1	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0002c0002t0002	a0002	c0002	t0002	0/0	3	2	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0003c0003t0001	a0003	c0003	t0001	0/0	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta
a0004c0004t0002	a0004	c0004	t0002	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1	copy fasta

actghapid	ahapid	chapid	thapid	ghapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename
a0001c0001t0001g0001	a0001	c0001	t0001	g0001	0/0	50	3	13	20	5	9	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0002	a0001	c0001	t0001	g0002	0/0	51	2	15	28	3	3	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0003	a0001	c0001	t0001	g0003	0/0	39	8	13	5	3	10	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0005	a0001	c0001	t0001	g0005	0/1	17	5	5	2	0	4	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0007	a0001	c0001	t0001	g0007	0/0	9	2	1	2	1	3	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0009	a0001	c0001	t0001	g0009	0/0	11	5	5	0	0	1	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0010	a0001	c0001	t0001	g0010	0/0	9	6	1	1	0	1	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0015	a0001	c0001	t0001	g0015	0/0	3	0	0	1	0	2	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0020	a0001	c0001	t0001	g0020	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0025	a0001	c0001	t0001	g0025	0/0	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0001g0026	a0001	c0001	t0001	g0026	0/0	1	0	0	1	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0001	a0001	c0001	t0002	g0001	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0003	a0001	c0001	t0002	g0003	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0004	a0001	c0001	t0002	g0004	0/0	18	10	4	4	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0006	a0001	c0001	t0002	g0006	0/0	12	11	0	1	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0007	a0001	c0001	t0002	g0007	0/0	3	3	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0011	a0001	c0001	t0002	g0011	0/0	7	4	1	2	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0012	a0001	c0001	t0002	g0012	0/0	3	3	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0013	a0001	c0001	t0002	g0013	0/0	4	4	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0014	a0001	c0001	t0002	g0014	0/0	3	3	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0016	a0001	c0001	t0002	g0016	0/0	2	0	0	2	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0017	a0001	c0001	t0002	g0017	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0018	a0001	c0001	t0002	g0018	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0019	a0001	c0001	t0002	g0019	0/0	2	2	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0021	a0001	c0001	t0002	g0021	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0022	a0001	c0001	t0002	g0022	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0023	a0001	c0001	t0002	g0023	0/0	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0002g0024	a0001	c0001	t0002	g0024	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0003g0008	a0001	c0001	t0003	g0008	0/0	12	12	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0004g0002	a0001	c0001	t0004	g0002	0/0	1	0	0	1	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0001c0001t0005g0003	a0001	c0001	t0005	g0003	0/0	1	0	0	0	0	1	LLCFC1_chr7_142934484_142945868	LLCFC1
a0002c0002t0002g0012	a0002	c0002	t0002	g0012	0/0	2	1	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0002c0002t0002g0014	a0002	c0002	t0002	g0014	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0003c0003t0001g0001	a0003	c0003	t0001	g0001	0/0	1	0	1	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1
a0004c0004t0002g0013	a0004	c0004	t0002	g0013	0/0	1	1	0	0	0	0	LLCFC1_chr7_142934484_142945868	LLCFC1

sampleid	haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename
HG00099	hp1	a0001	c0001	t0001	g0002	EUR	GBR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00408	hp2	a0001	c0001	t0001	g0002	EAS	CHS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00558	hp2	a0001	c0001	t0001	g0002	EAS	CHS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00597	hp1	a0001	c0001	t0001	g0002	EAS	CHS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00597	hp2	a0001	c0001	t0001	g0002	EAS	CHS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00639	hp1	a0001	c0001	t0001	g0003	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00642	hp1	a0001	c0001	t0001	g0010	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00642	hp2	a0001	c0001	t0002	g0004	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00673	hp1	a0001	c0001	t0001	g0002	EAS	CHS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00673	hp2	a0001	c0001	t0001	g0002	EAS	CHS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00733	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00735	hp1	a0001	c0001	t0002	g0004	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00735	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00738	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00741	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG00741	hp2	a0003	c0003	t0001	g0001	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01070	hp1	a0001	c0001	t0001	g0009	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01070	hp2	a0001	c0001	t0001	g0009	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01071	hp1	a0001	c0001	t0001	g0003	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01071	hp2	a0001	c0001	t0001	g0003	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01074	hp1	a0001	c0001	t0001	g0003	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01074	hp2	a0001	c0001	t0001	g0003	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01081	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01081	hp2	a0001	c0001	t0001	g0005	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01099	hp1	a0001	c0001	t0001	g0009	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01099	hp2	a0001	c0001	t0001	g0025	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01106	hp1	a0001	c0001	t0001	g0005	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01106	hp2	a0001	c0001	t0002	g0004	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01109	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01109	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01168	hp2	a0001	c0001	t0001	g0005	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01169	hp2	a0001	c0001	t0001	g0003	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01175	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01192	hp1	a0001	c0001	t0001	g0003	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01192	hp2	a0001	c0001	t0001	g0007	AMR	PUR	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01255	hp1	a0001	c0001	t0001	g0002	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01256	hp1	a0001	c0001	t0002	g0004	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01256	hp2	a0001	c0001	t0001	g0003	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01257	hp1	a0001	c0001	t0001	g0009	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01257	hp2	a0001	c0001	t0001	g0003	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01258	hp1	a0001	c0001	t0001	g0009	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01258	hp2	a0001	c0001	t0001	g0003	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01261	hp2	a0001	c0001	t0002	g0023	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01358	hp2	a0001	c0001	t0001	g0003	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01361	hp1	a0001	c0001	t0001	g0002	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01361	hp2	a0002	c0002	t0002	g0012	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01433	hp1	a0001	c0001	t0001	g0003	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01433	hp2	a0001	c0001	t0001	g0003	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01517	hp2	a0001	c0001	t0001	g0007	EUR	IBS	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01884	hp1	a0001	c0001	t0001	g0010	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01884	hp2	a0001	c0001	t0002	g0006	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01891	hp1	a0001	c0001	t0001	g0005	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01891	hp2	a0004	c0004	t0002	g0013	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01952	hp2	a0001	c0001	t0002	g0011	AMR	PEL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01978	hp1	a0001	c0001	t0001	g0005	AMR	PEL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02040	hp2	a0001	c0001	t0002	g0004	EAS	KHV	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02055	hp1	a0001	c0001	t0002	g0018	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02055	hp2	a0001	c0001	t0002	g0007	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02056	hp1	a0001	c0001	t0001	g0002	EAS	KHV	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02071	hp1	a0001	c0001	t0001	g0010	EAS	KHV	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02129	hp1	a0001	c0001	t0001	g0002	EAS	KHV	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02145	hp1	a0001	c0001	t0002	g0017	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02145	hp2	a0001	c0001	t0001	g0007	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02148	hp1	a0001	c0001	t0001	g0005	AMR	PEL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02148	hp2	a0001	c0001	t0001	g0002	AMR	PEL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02155	hp1	a0001	c0001	t0002	g0011	EAS	CDX	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02165	hp1	a0001	c0001	t0002	g0011	EAS	CDX	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02165	hp2	a0001	c0001	t0001	g0005	EAS	CDX	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02257	hp1	a0001	c0001	t0001	g0020	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02257	hp2	a0001	c0001	t0002	g0006	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02258	hp1	a0001	c0001	t0001	g0009	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02258	hp2	a0001	c0001	t0002	g0004	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02280	hp1	a0001	c0001	t0002	g0014	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02280	hp2	a0001	c0001	t0001	g0007	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02300	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02451	hp1	a0001	c0001	t0002	g0011	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02451	hp2	a0001	c0001	t0002	g0004	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02572	hp1	a0001	c0001	t0002	g0021	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02572	hp2	a0001	c0001	t0002	g0019	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02615	hp1	a0001	c0001	t0003	g0008	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02615	hp2	a0001	c0001	t0001	g0009	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02622	hp1	a0001	c0001	t0001	g0005	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02622	hp2	a0001	c0001	t0002	g0011	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02630	hp1	a0001	c0001	t0002	g0012	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02630	hp2	a0001	c0001	t0003	g0008	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02647	hp1	a0001	c0001	t0002	g0004	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02647	hp2	a0001	c0001	t0001	g0003	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02683	hp2	a0001	c0001	t0001	g0002	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02698	hp2	a0001	c0001	t0001	g0003	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02717	hp1	a0001	c0001	t0001	g0003	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02717	hp2	a0001	c0001	t0002	g0004	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02723	hp1	a0001	c0001	t0001	g0003	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02723	hp2	a0001	c0001	t0002	g0014	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02735	hp2	a0001	c0001	t0001	g0005	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02738	hp1	a0001	c0001	t0001	g0005	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02738	hp2	a0001	c0001	t0001	g0005	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02809	hp1	a0001	c0001	t0001	g0009	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02809	hp2	a0001	c0001	t0002	g0014	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02818	hp1	a0001	c0001	t0001	g0003	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02818	hp2	a0001	c0001	t0002	g0019	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02886	hp1	a0001	c0001	t0002	g0006	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02886	hp2	a0002	c0002	t0002	g0014	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02895	hp1	a0001	c0001	t0001	g0010	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02895	hp2	a0001	c0001	t0001	g0005	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02896	hp1	a0001	c0001	t0001	g0003	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02896	hp2	a0001	c0001	t0003	g0008	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02897	hp1	a0001	c0001	t0003	g0008	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02897	hp2	a0001	c0001	t0001	g0010	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02922	hp1	a0001	c0001	t0002	g0006	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02922	hp2	a0001	c0001	t0002	g0013	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02965	hp1	a0001	c0001	t0002	g0017	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02965	hp2	a0001	c0001	t0003	g0008	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02970	hp1	a0001	c0001	t0002	g0004	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02970	hp2	a0001	c0001	t0001	g0009	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02976	hp1	a0001	c0001	t0002	g0006	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02976	hp2	a0001	c0001	t0001	g0005	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03017	hp2	a0001	c0001	t0001	g0010	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03041	hp1	a0001	c0001	t0002	g0022	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03041	hp2	a0001	c0001	t0002	g0006	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03098	hp1	a0001	c0001	t0002	g0013	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03098	hp2	a0001	c0001	t0002	g0012	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03130	hp1	a0001	c0001	t0002	g0001	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03130	hp2	a0001	c0001	t0002	g0006	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03139	hp1	a0001	c0001	t0002	g0013	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03139	hp2	a0001	c0001	t0001	g0020	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03195	hp1	a0001	c0001	t0001	g0010	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03195	hp2	a0001	c0001	t0002	g0004	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03209	hp1	a0002	c0002	t0002	g0012	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03209	hp2	a0001	c0001	t0002	g0004	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03225	hp2	a0001	c0001	t0003	g0008	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03239	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03239	hp2	a0001	c0001	t0005	g0003	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03453	hp1	a0001	c0001	t0003	g0008	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03453	hp2	a0001	c0001	t0002	g0007	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03486	hp1	a0001	c0001	t0002	g0013	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03486	hp2	a0001	c0001	t0002	g0006	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03491	hp1	a0001	c0001	t0001	g0003	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03492	hp1	a0001	c0001	t0001	g0015	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03492	hp2	a0001	c0001	t0001	g0003	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03516	hp1	a0001	c0001	t0003	g0008	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03516	hp2	a0001	c0001	t0002	g0006	AFR	ESN	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03540	hp1	a0001	c0001	t0002	g0004	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03540	hp2	a0001	c0001	t0001	g0003	AFR	GWD	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03579	hp1	a0001	c0001	t0002	g0004	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03579	hp2	a0001	c0001	t0001	g0002	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03669	hp1	a0001	c0001	t0001	g0003	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03669	hp2	a0001	c0001	t0001	g0003	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03688	hp1	a0001	c0001	t0001	g0007	SAS	STU	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03688	hp2	a0001	c0001	t0001	g0007	SAS	STU	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03710	hp1	a0001	c0001	t0001	g0003	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03942	hp1	a0001	c0001	t0001	g0005	SAS	BEB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03942	hp2	a0001	c0001	t0001	g0015	SAS	BEB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	LLCFC1_chr7_142934484_142945868	LLCFC1
HG04115	hp2	a0001	c0001	t0001	g0003	SAS	STU	LLCFC1_chr7_142934484_142945868	LLCFC1
HG04184	hp1	a0001	c0001	t0001	g0003	SAS	BEB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG04184	hp2	a0001	c0001	t0001	g0007	SAS	BEB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG04204	hp1	a0001	c0001	t0001	g0003	SAS	STU	LLCFC1_chr7_142934484_142945868	LLCFC1
HG04204	hp2	a0001	c0001	t0001	g0009	SAS	STU	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18522	hp1	a0001	c0001	t0001	g0003	AFR	YRI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18522	hp2	a0001	c0001	t0002	g0003	AFR	YRI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18906	hp1	a0001	c0001	t0001	g0009	AFR	YRI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18906	hp2	a0001	c0001	t0002	g0024	AFR	YRI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18943	hp1	a0001	c0001	t0002	g0004	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18943	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18945	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18945	hp2	a0001	c0001	t0002	g0004	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18948	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18963	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18972	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18972	hp2	a0001	c0001	t0002	g0016	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18973	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18978	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18978	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18980	hp1	a0001	c0001	t0001	g0015	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18980	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18981	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18981	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18984	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18984	hp2	a0001	c0001	t0001	g0007	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18988	hp1	a0001	c0001	t0004	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18988	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18993	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA18993	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19011	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19030	hp1	a0001	c0001	t0001	g0003	AFR	LWK	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19030	hp2	a0001	c0001	t0003	g0008	AFR	LWK	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19043	hp1	a0001	c0001	t0002	g0006	AFR	LWK	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19043	hp2	a0001	c0001	t0001	g0005	AFR	LWK	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19054	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19054	hp2	a0001	c0001	t0002	g0016	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19055	hp1	a0001	c0001	t0001	g0026	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19055	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19057	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19062	hp1	a0001	c0001	t0001	g0007	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19062	hp2	a0001	c0001	t0002	g0004	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19064	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19068	hp1	a0001	c0001	t0001	g0005	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19068	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19074	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19082	hp1	a0001	c0001	t0002	g0006	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19086	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19086	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19088	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19090	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19090	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19240	hp1	a0001	c0001	t0002	g0006	AFR	YRI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA19240	hp2	a0001	c0001	t0002	g0012	AFR	YRI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20129	hp1	a0001	c0001	t0003	g0008	AFR	ASW	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20129	hp2	a0001	c0001	t0003	g0008	AFR	ASW	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20752	hp1	a0001	c0001	t0001	g0003	EUR	TSI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20752	hp2	a0001	c0001	t0001	g0003	EUR	TSI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20805	hp2	a0001	c0001	t0001	g0003	EUR	TSI	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20905	hp2	a0001	c0001	t0001	g0003	SAS	GIH	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01123	hp1	a0001	c0001	t0001	g0002	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG01123	hp2	a0001	c0001	t0001	g0002	AMR	CLM	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02109	hp1	a0001	c0001	t0002	g0004	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02109	hp2	a0001	c0001	t0002	g0007	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02486	hp1	a0001	c0001	t0002	g0001	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02486	hp2	a0001	c0001	t0002	g0011	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG02559	hp2	a0001	c0001	t0003	g0008	AFR	ACB	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03471	hp1	a0001	c0001	t0001	g0010	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG03471	hp2	a0001	c0001	t0002	g0011	AFR	MSL	LLCFC1_chr7_142934484_142945868	LLCFC1
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	LLCFC1_chr7_142934484_142945868	LLCFC1
HG06807	hp2	a0001	c0001	t0002	g0018	AFR	USA	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20300	hp1	a0001	c0001	t0001	g0002	AFR	USA	LLCFC1_chr7_142934484_142945868	LLCFC1
NA20300	hp2	a0001	c0001	t0001	g0010	AFR	USA	LLCFC1_chr7_142934484_142945868	LLCFC1
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0005	REF	REF	LLCFC1_chr7_142934484_142945868	LLCFC1

chr:pos	ref	alt	# # of ahapid:amio-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna_pos_length	cds_pos_length	aa_pos_length	chr	pos
chr7:142939686	A A	G G	1	a0004 a0004	1	HG01891.hp2 HG01891.hp2	missense_variant	MODERATE	c.65A>G c.65A>G	p.Gln22Arg p.Gln22Arg	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/2	203/788	65/369	22/122	chr7	142939686
chr7:142940517	T T	C C	1	a0003 a0003	1	HG00741.hp2 HG00741.hp2	missense_variant	MODERATE	c.299T>C c.299T>C	p.Met100Thr p.Met100Thr	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	2/2	437/788	299/369	100/122	chr7	142940517
chr7:142940546	A A	T T	1	a0002 a0002	3	HG01361.hp2 HG02886.hp2 HG03209.hp1 HG01361.hp2 HG02886.hp2 HG03209.hp1	missense_variant	MODERATE	c.328A>T c.328A>T	p.Thr110Ser p.Thr110Ser	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	2/2	466/788	328/369	110/122	chr7	142940546

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna_pos_length	cds_pos_length	aa_pos_length	distance	status	chr	pos

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr7:142939500	G G	A A	1	a0001c0001t0004 a0001c0001t0004	1	NA18988.hp1 NA18988.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-122G>A c.-122G>A	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/2		chr7	142939500
chr7:142939502	G G	A A	4	a0001c0001t0002 a0001c0001t0003 a0002c0002t0002 others(1): Show a0001c0001t0002 a0001c0001t0003 a0002c0002t0002 a0004c0004t0002	81	HG00642.hp2 HG00735.hp1 HG01106.hp2 others(78): Show HG00642.hp2 HG00735.hp1 HG01106.hp2 HG01256.hp1 HG01261.hp2 HG01361.hp2 HG01884.hp2 HG01891.hp2 HG01952.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18945.hp2 NA18972.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19062.hp2 NA19082.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2	5_prime_UTR_variant	MODIFIER	c.-120G>A c.-120G>A	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/2	120	chr7	142939502
chr7:142939607	T T	C C	3	a0001c0001t0002 a0002c0002t0002 a0004c0004t0002 a0001c0001t0002 a0002c0002t0002 a0004c0004t0002	69	HG00642.hp2 HG00735.hp1 HG01106.hp2 others(66): Show HG00642.hp2 HG00735.hp1 HG01106.hp2 HG01256.hp1 HG01261.hp2 HG01361.hp2 HG01884.hp2 HG01891.hp2 HG01952.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18945.hp2 NA18972.hp2 NA19043.hp1 NA19054.hp2 NA19062.hp2 NA19082.hp1 NA19240.hp1 NA19240.hp2	5_prime_UTR_variant	MODIFIER	c.-15T>C c.-15T>C	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/2	15	chr7	142939607
chr7:142940608	C C	T T	1	a0001c0001t0005 a0001c0001t0005	1	HG03239.hp2 HG03239.hp2	3_prime_UTR_variant	MODIFIER	c.21C>T c.21C>T	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	2/2	21	chr7	142940608

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr7:142939774	G G	A A	7	a0001c0001t0002g0012 a0001c0001t0002g0014 a0001c0001t0002g0021 others(4): Show a0001c0001t0002g0012 a0001c0001t0002g0014 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0002c0002t0002g0012 a0002c0002t0002g0014	12	HG01261.hp2 HG01361.hp2 HG02280.hp1 others(9): Show HG01261.hp2 HG01361.hp2 HG02280.hp1 HG02572.hp1 HG02630.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp2 HG03041.hp1 HG03098.hp2 HG03209.hp1 NA19240.hp2	intron_variant	MODIFIER	c.133+20G>A c.133+20G>A	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1		chr7	142939774
chr7:142939965	G G	C C	17	a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0011 others(14): Show a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0002c0002t0002g0012 a0002c0002t0002g0014 a0004c0004t0002g0013	63	HG00642.hp2 HG00735.hp1 HG01106.hp2 others(60): Show HG00642.hp2 HG00735.hp1 HG01106.hp2 HG01256.hp1 HG01261.hp2 HG01361.hp2 HG01884.hp2 HG01891.hp2 HG01952.hp2 HG02040.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG06807.hp2 NA18906.hp2 NA18943.hp1 NA18945.hp2 NA18972.hp2 NA19043.hp1 NA19054.hp2 NA19062.hp2 NA19082.hp1 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.133+211G>C c.133+211G>C	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1		chr7	142939965
chr7:142940053	C C	T T	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.133+299C>T c.133+299C>T	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1		chr7	142940053
chr7:142940106	G G	GGT GGT	3	a0001c0001t0001g0020 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0001g0020 a0001c0001t0002g0016 a0001c0001t0002g0017	6	HG02145.hp1 HG02257.hp1 HG02965.hp1 others(3): Show HG02145.hp1 HG02257.hp1 HG02965.hp1 HG03139.hp2 NA18972.hp2 NA19054.hp2	intron_variant	MODIFIER	c.134-195_134-194dup others(2): Show c.134-195_134-194dupGT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940106
chr7:142940106	GGT GGT	G G	4	a0001c0001t0001g0010 a0001c0001t0002g0004 a0001c0001t0002g0014 others(1): Show a0001c0001t0001g0010 a0001c0001t0002g0004 a0001c0001t0002g0014 a0002c0002t0002g0014	31	HG00642.hp1 HG00642.hp2 HG00735.hp1 others(28): Show HG00642.hp1 HG00642.hp2 HG00735.hp1 HG01106.hp2 HG01256.hp1 HG01884.hp1 HG02040.hp2 HG02071.hp1 HG02109.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02647.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02970.hp1 HG03017.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03471.hp1 HG03540.hp1 HG03579.hp1 NA18943.hp1 NA18945.hp2 NA19062.hp2 NA20300.hp2	intron_variant	MODIFIER	c.134-195_134-194del others(2): Show c.134-195_134-194delGT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940106
chr7:142940106	GGTGT GGTGT	G G	3	a0001c0001t0001g0005 a0001c0001t0002g0006 a0001c0001t0002g0022 a0001c0001t0001g0005 a0001c0001t0002g0006 a0001c0001t0002g0022	30	HG01081.hp2 HG01106.hp1 HG01168.hp2 others(27): Show HG01081.hp2 HG01106.hp1 HG01168.hp2 HG01884.hp2 HG01891.hp1 HG01978.hp1 HG02148.hp1 HG02165.hp2 HG02257.hp2 HG02622.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02895.hp2 HG02922.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp2 HG03486.hp2 HG03516.hp2 HG03942.hp1 NA19043.hp1 NA19043.hp2 NA19068.hp1 NA19082.hp1 NA19240.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.134-197_134-194del others(4): Show c.134-197_134-194delGTGT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940106
chr7:142940106	GGTGTGT GGTGTGT	G G	7	a0001c0001t0001g0003 a0001c0001t0002g0003 a0001c0001t0002g0012 others(4): Show a0001c0001t0001g0003 a0001c0001t0002g0003 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0005g0003 a0002c0002t0002g0012 a0004c0004t0002g0013	51	HG00639.hp1 HG01071.hp1 HG01071.hp2 others(48): Show HG00639.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01169.hp2 HG01192.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01891.hp2 HG02630.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02896.hp1 HG02922.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03486.hp1 HG03491.hp1 HG03492.hp2 HG03540.hp2 HG03669.hp1 HG03669.hp2 HG03710.hp1 HG04115.hp2 HG04184.hp1 HG04204.hp1 NA18522.hp1 NA18522.hp2 NA18943.hp2 NA18980.hp2 NA18984.hp1 NA18988.hp2 NA19030.hp1 NA19064.hp2 NA19240.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp2	intron_variant	MODIFIER	c.134-199_134-194del others(6): Show c.134-199_134-194delGTGTGT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940106
chr7:142940106	GGTGTGTG others(1): Show GGTGTGTGT	G G	5	a0001c0001t0001g0001 a0001c0001t0001g0026 a0001c0001t0002g0001 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0026 a0001c0001t0002g0001 a0001c0001t0002g0019 a0003c0003t0001g0001	56	HG00099.hp2 HG00323.hp1 HG00408.hp1 others(53): Show HG00099.hp2 HG00323.hp1 HG00408.hp1 HG00558.hp1 HG00639.hp2 HG00733.hp1 HG00738.hp1 HG00741.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp2 HG01255.hp2 HG01261.hp1 HG01358.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02155.hp2 HG02300.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02683.hp1 HG02698.hp1 HG02735.hp1 HG02818.hp2 HG03017.hp1 HG03130.hp1 HG03225.hp1 HG03491.hp2 HG03654.hp1 HG03654.hp2 HG03710.hp2 HG04115.hp1 HG06807.hp1 NA18948.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp2 NA18972.hp1 NA18973.hp2 NA18993.hp1 NA19011.hp1 NA19055.hp1 NA19057.hp2 NA19064.hp1 NA19074.hp1 NA19082.hp2 NA19088.hp1	intron_variant	MODIFIER	c.134-201_134-194del others(8): Show c.134-201_134-194delGTGTGTGT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940106
chr7:142940106	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	4	a0001c0001t0001g0002 a0001c0001t0002g0023 a0001c0001t0002g0024 others(1): Show a0001c0001t0001g0002 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0004g0002	54	HG00099.hp1 HG00323.hp2 HG00408.hp2 others(51): Show HG00099.hp1 HG00323.hp2 HG00408.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01081.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01255.hp1 HG01261.hp2 HG01361.hp1 HG01952.hp1 HG02056.hp1 HG02129.hp1 HG02148.hp2 HG02300.hp1 HG02683.hp2 HG03239.hp1 HG03579.hp2 NA18906.hp2 NA18945.hp1 NA18948.hp2 NA18963.hp1 NA18973.hp1 NA18978.hp1 NA18978.hp2 NA18981.hp1 NA18981.hp2 NA18988.hp1 NA18993.hp2 NA19011.hp2 NA19054.hp1 NA19055.hp2 NA19057.hp1 NA19068.hp2 NA19074.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA20300.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.134-203_134-194del others(10): Show c.134-203_134-194delGTGTGTGTGT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940106
chr7:142940106	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	2	a0001c0001t0001g0007 a0001c0001t0002g0007 a0001c0001t0001g0007 a0001c0001t0002g0007	12	HG01192.hp2 HG01517.hp2 HG02055.hp2 others(9): Show HG01192.hp2 HG01517.hp2 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02280.hp2 HG03453.hp2 HG03688.hp1 HG03688.hp2 HG04184.hp2 NA18984.hp2 NA19062.hp1	intron_variant	MODIFIER	c.134-205_134-194del others(12): Show c.134-205_134-194delGTGTGTGTGTGT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940106
chr7:142940106	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	1	a0001c0001t0003g0008 a0001c0001t0003g0008	12	HG02559.hp2 HG02615.hp1 HG02630.hp2 others(9): Show HG02559.hp2 HG02615.hp1 HG02630.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG03225.hp2 HG03453.hp1 HG03516.hp1 NA19030.hp2 NA20129.hp1 NA20129.hp2	intron_variant	MODIFIER	c.134-207_134-194del others(14): Show c.134-207_134-194delGTGTGTGTGTGTGT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940106
chr7:142940147	GTGTGTGT others(4): Show GTGTGTGTGTGT	G G	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	HG01099.hp2 HG01099.hp2	intron_variant	MODIFIER	c.134-203_134-193del others(11): Show c.134-203_134-193delGTGTGTGTGTT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940147
chr7:142940151	GTGTGTGT GTGTGTGT	G G	1	a0001c0001t0001g0015 a0001c0001t0001g0015	3	HG03492.hp1 HG03942.hp2 NA18980.hp1 HG03492.hp1 HG03942.hp2 NA18980.hp1	intron_variant	MODIFIER	c.134-199_134-193del others(7): Show c.134-199_134-193delGTGTGTT	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr7	142940151
chr7:142940271	C C	T T	1	a0001c0001t0003g0008 a0001c0001t0003g0008	12	HG02559.hp2 HG02615.hp1 HG02630.hp2 others(9): Show HG02559.hp2 HG02615.hp1 HG02630.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG03225.hp2 HG03453.hp1 HG03516.hp1 NA19030.hp2 NA20129.hp1 NA20129.hp2	intron_variant	MODIFIER	c.134-81C>T c.134-81C>T	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1		chr7	142940271
chr7:142940349	C C	T T	2	a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0017 a0001c0001t0002g0018	4	HG02055.hp1 HG02145.hp1 HG02965.hp1 others(1): Show HG02055.hp1 HG02145.hp1 HG02965.hp1 HG06807.hp2	splice_region_variant&intron_variant	LOW	c.134-3C>T c.134-3C>T	LLCFC1	ENSG00000165131.8	transcript	ENST00000409607.5	protein_coding	1/1		chr7	142940349

Search by Gene

Search

🧬 JoGo Online Haplotype Explorer LLCFC1_chr7_142934484_142945868

JoGo Local Haplotype Explorer (on iGV) LLCFC1_chr7_142934484_142945868

🧬 Gene Summary

Translation Multiple Alignment View

LD View

AAmino acid (protein) Level Haplotype Info (Total: 4)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 5)

GGenebody Level Haplotype Info (Total: 26)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 8)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 35)

Haplotype Details by Sample (Haploid Level) (Total: 277)

AAmino acid (protein) Level Variants (Effect to Protein Coding Variants) (Total: 3)

CCoding Level Variants (Synonymous Mutations) (Total: 0)

TTranscript Level Variants (5'UTR+3'UTR) (Total: 4)

GGenebody Level Haplotype Variants (Intron) (Total: 15)

Genealogies

External Link

Annotation (Repeats)

Annotation (SNP Array)