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geneid	2206
ensemblid	ENSG00000149534.9
hgncid	7316
symbol	MS4A2
name	membrane spanning 4-domains A2
refseq_nuc	NM_000139.5
refseq_prot	NP_000130.1
ensembl_nuc	ENST00000278888.8
ensembl_prot	ENSP00000278888.3
mane_status	MANE Select
chr	chr11
start	60088664
end	60098467
strand	+
ver	v1.2
region	chr11:60088664-60098467
region5000	chr11:60083664-60103467
regionname0	MS4A2_chr11_60088664_60098467
regionname5000	MS4A2_chr11_60083664_60103467

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	aa
a0001	1/1	244	345	67	67	148	16	45	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002	0/0	244	58	16	2	40	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0003	0/0	244	8	8	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0004	0/0	244	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0005	0/0	244	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0006	0/0	244	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0007	0/0	244	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq
c0001	1/1	735	345	67	67	148	16	45	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
c0002	0/0	735	58	16	2	40	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
c0003	0/0	735	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
c0004	0/0	735	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
c0005	0/0	735	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
c0006	0/0	735	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
c0007	0/0	735	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
c0008	0/0	735	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta

thapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq
t0001	1/1	2914	101	2	28	61	1	7	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0002	0/0	2912	68	2	25	14	9	18	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0003	0/0	2914	65	31	4	19	3	8	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0004	0/0	2913	44	8	1	35	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0005	0/0	2914	29	9	2	11	0	7	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0006	0/0	2912	24	3	0	19	0	2	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0007	0/0	2913	10	7	2	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0008	0/0	2915	9	0	1	7	0	1	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0009	0/0	2915	5	4	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0010	0/0	2912	4	1	2	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0011	0/0	2913	4	0	2	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0012	0/0	2914	4	3	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0013	0/0	2913	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0014	0/0	2914	4	1	0	3	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0015	0/0	2913	3	3	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0016	0/0	2913	3	3	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0017	0/0	2915	3	0	1	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0018	0/0	2913	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0019	0/0	2915	2	0	0	0	0	2	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0020	0/0	2884	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0021	0/0	2914	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0022	0/0	2912	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0023	0/0	2914	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0024	0/0	2913	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0025	0/0	2912	1	0	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0026	0/0	2912	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0027	0/0	2912	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0028	0/0	2913	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0029	0/0	2912	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0030	0/0	2914	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0031	0/0	2914	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0032	0/0	2914	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0033	0/0	2914	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0034	0/0	2914	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0035	0/0	2913	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0036	0/0	2914	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0037	0/0	2914	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0038	0/0	2915	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0039	0/0	2915	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0040	0/0	2914	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0041	0/0	2913	1	0	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0042	0/0	2914	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0043	0/0	2915	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0044	0/0	2915	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0045	0/0	2914	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0046	0/0	2914	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0047	0/0	2914	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0048	0/0	2913	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
t0049	0/0	2913	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename
g0001	0/1	140	30	25	71	1	12	MS4A2_chr11_60083664_60103467	MS4A2
g0002	0/0	60	3	22	9	11	15	MS4A2_chr11_60083664_60103467	MS4A2
g0003	0/0	28	1	2	17	2	6	MS4A2_chr11_60083664_60103467	MS4A2
g0004	0/0	22	1	6	11	0	4	MS4A2_chr11_60083664_60103467	MS4A2
g0005	0/0	19	0	0	19	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0006	0/0	18	4	0	14	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0007	0/0	12	12	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0008	0/0	12	5	1	6	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0009	0/0	11	0	0	11	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0010	0/0	7	0	0	7	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0011	0/0	6	1	3	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0012	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0013	0/0	4	2	0	0	0	2	MS4A2_chr11_60083664_60103467	MS4A2
g0014	0/0	4	3	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0015	0/0	4	3	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0016	0/0	3	3	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0017	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0018	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0019	0/0	2	0	2	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0020	0/0	2	0	2	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0021	0/0	2	1	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2
g0022	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0023	0/0	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0024	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0025	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0026	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0027	0/0	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0028	0/0	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0029	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0030	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0031	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0032	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0033	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0034	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0035	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0036	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0037	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
g0038	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0039	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0040	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
g0041	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
g0042	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0043	1/0	1	0	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0044	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0045	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0046	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0047	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0048	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0049	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0050	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0051	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0052	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
g0053	0/0	1	0	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2
g0054	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
g0055	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0056	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0057	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0058	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
g0059	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0060	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0061	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0062	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0063	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0064	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0065	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0066	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0067	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
g0068	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2

achapid	ahapid	chapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	acseq
a0001c0001	a0001	c0001	1/1	345	67	67	148	16	45	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002	a0002	c0002	0/0	58	16	2	40	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0003c0004	a0003	c0004	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0003c0005	a0003	c0005	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0004c0003	a0004	c0003	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0005c0006	a0005	c0006	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0006c0007	a0006	c0007	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0007c0008	a0007	c0008	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta

acthapid	ahapid	chapid	thapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	actseq
a0001c0001t0001	a0001	c0001	t0001	1/1	101	2	28	61	1	7	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0002	a0001	c0001	t0002	0/0	68	2	25	14	9	18	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0003	a0001	c0001	t0003	0/0	59	25	4	19	3	8	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0005	a0001	c0001	t0005	0/0	28	9	2	11	0	6	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0006	a0001	c0001	t0006	0/0	24	3	0	19	0	2	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0007	a0001	c0001	t0007	0/0	3	1	1	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0008	a0001	c0001	t0008	0/0	9	0	1	7	0	1	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0009	a0001	c0001	t0009	0/0	5	4	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0010	a0001	c0001	t0010	0/0	4	1	2	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0011	a0001	c0001	t0011	0/0	4	0	2	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0012	a0001	c0001	t0012	0/0	4	3	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0015	a0001	c0001	t0015	0/0	3	3	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0016	a0001	c0001	t0016	0/0	3	3	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0017	a0001	c0001	t0017	0/0	3	0	1	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0018	a0001	c0001	t0018	0/0	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0019	a0001	c0001	t0019	0/0	2	0	0	0	0	2	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0020	a0001	c0001	t0020	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0021	a0001	c0001	t0021	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0022	a0001	c0001	t0022	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0023	a0001	c0001	t0023	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0024	a0001	c0001	t0024	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0025	a0001	c0001	t0025	0/0	1	0	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0026	a0001	c0001	t0026	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0027	a0001	c0001	t0027	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0028	a0001	c0001	t0028	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0029	a0001	c0001	t0029	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0030	a0001	c0001	t0030	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0031	a0001	c0001	t0031	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0032	a0001	c0001	t0032	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0033	a0001	c0001	t0033	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0037	a0001	c0001	t0037	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0038	a0001	c0001	t0038	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0039	a0001	c0001	t0039	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0040	a0001	c0001	t0040	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0041	a0001	c0001	t0041	0/0	1	0	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0042	a0001	c0001	t0042	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0043	a0001	c0001	t0043	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0044	a0001	c0001	t0044	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0001c0001t0046	a0001	c0001	t0046	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0004	a0002	c0002	t0004	0/0	40	4	1	35	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0007	a0002	c0002	t0007	0/0	5	4	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0013	a0002	c0002	t0013	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0014	a0002	c0002	t0014	0/0	4	1	0	3	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0035	a0002	c0002	t0035	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0045	a0002	c0002	t0045	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0047	a0002	c0002	t0047	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0048	a0002	c0002	t0048	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0002c0002t0049	a0002	c0002	t0049	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0003c0004t0003	a0003	c0004	t0003	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0003c0004t0007	a0003	c0004	t0007	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0003c0005t0003	a0003	c0005	t0003	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0004c0003t0004	a0004	c0003	t0004	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0005c0006t0036	a0005	c0006	t0036	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0006c0007t0005	a0006	c0007	t0005	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta
a0007c0008t0034	a0007	c0008	t0034	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2	copy fasta

actghapid	ahapid	chapid	thapid	ghapid	grch38/chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename
a0001c0001t0001g0001	a0001	c0001	t0001	g0001	0/1	76	2	19	47	1	6	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0001g0004	a0001	c0001	t0001	g0004	0/0	14	0	5	8	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0001g0011	a0001	c0001	t0001	g0011	0/0	5	0	3	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0001g0033	a0001	c0001	t0001	g0033	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0001g0034	a0001	c0001	t0001	g0034	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0001g0043	a0001	c0001	t0001	g0043	1/0	1	0	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0001g0045	a0001	c0001	t0001	g0045	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0001g0047	a0001	c0001	t0001	g0047	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0001g0051	a0001	c0001	t0001	g0051	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0002	a0001	c0001	t0002	g0002	0/0	53	2	22	6	9	14	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0010	a0001	c0001	t0002	g0010	0/0	6	0	0	6	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0020	a0001	c0001	t0002	g0020	0/0	2	0	2	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0036	a0001	c0001	t0002	g0036	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0037	a0001	c0001	t0002	g0037	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0038	a0001	c0001	t0002	g0038	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0039	a0001	c0001	t0002	g0039	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0040	a0001	c0001	t0002	g0040	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0041	a0001	c0001	t0002	g0041	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0002g0068	a0001	c0001	t0002	g0068	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0001	a0001	c0001	t0003	g0001	0/0	16	14	2	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0003	a0001	c0001	t0003	g0003	0/0	26	0	1	17	2	6	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0012	a0001	c0001	t0003	g0012	0/0	3	3	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0017	a0001	c0001	t0003	g0017	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0022	a0001	c0001	t0003	g0022	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0023	a0001	c0001	t0003	g0023	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0024	a0001	c0001	t0003	g0024	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0049	a0001	c0001	t0003	g0049	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0050	a0001	c0001	t0003	g0050	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0052	a0001	c0001	t0003	g0052	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0053	a0001	c0001	t0003	g0053	0/0	1	0	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0054	a0001	c0001	t0003	g0054	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0056	a0001	c0001	t0003	g0056	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0003g0057	a0001	c0001	t0003	g0057	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0005g0001	a0001	c0001	t0005	g0001	0/0	22	9	1	10	0	2	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0005g0004	a0001	c0001	t0005	g0004	0/0	4	0	0	1	0	3	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0005g0048	a0001	c0001	t0005	g0048	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0005g0058	a0001	c0001	t0005	g0058	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0006g0005	a0001	c0001	t0006	g0005	0/0	19	0	0	19	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0006g0013	a0001	c0001	t0006	g0013	0/0	4	2	0	0	0	2	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0006g0042	a0001	c0001	t0006	g0042	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0007g0003	a0001	c0001	t0007	g0003	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0007g0004	a0001	c0001	t0007	g0004	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0007g0055	a0001	c0001	t0007	g0055	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0008g0001	a0001	c0001	t0008	g0001	0/0	8	0	1	6	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0008g0004	a0001	c0001	t0008	g0004	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0009g0007	a0001	c0001	t0009	g0007	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0009g0023	a0001	c0001	t0009	g0023	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0010g0002	a0001	c0001	t0010	g0002	0/0	2	1	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0010g0019	a0001	c0001	t0010	g0019	0/0	2	0	2	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0011g0001	a0001	c0001	t0011	g0001	0/0	4	0	2	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0012g0014	a0001	c0001	t0012	g0014	0/0	4	3	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0015g0001	a0001	c0001	t0015	g0001	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0015g0011	a0001	c0001	t0015	g0011	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0016g0016	a0001	c0001	t0016	g0016	0/0	3	3	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0017g0001	a0001	c0001	t0017	g0001	0/0	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0017g0004	a0001	c0001	t0017	g0004	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0018g0002	a0001	c0001	t0018	g0002	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0018g0010	a0001	c0001	t0018	g0010	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0019g0001	a0001	c0001	t0019	g0001	0/0	2	0	0	0	0	2	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0020g0044	a0001	c0001	t0020	g0044	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0021g0021	a0001	c0001	t0021	g0021	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0022g0002	a0001	c0001	t0022	g0002	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0023g0001	a0001	c0001	t0023	g0001	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0024g0035	a0001	c0001	t0024	g0035	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0025g0002	a0001	c0001	t0025	g0002	0/0	1	0	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0026g0002	a0001	c0001	t0026	g0002	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0027g0002	a0001	c0001	t0027	g0002	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0028g0018	a0001	c0001	t0028	g0018	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0029g0018	a0001	c0001	t0029	g0018	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0030g0001	a0001	c0001	t0030	g0001	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0031g0031	a0001	c0001	t0031	g0031	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0032g0001	a0001	c0001	t0032	g0001	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0033g0030	a0001	c0001	t0033	g0030	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0037g0001	a0001	c0001	t0037	g0001	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0038g0046	a0001	c0001	t0038	g0046	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0039g0012	a0001	c0001	t0039	g0012	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0040g0001	a0001	c0001	t0040	g0001	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0041g0021	a0001	c0001	t0041	g0021	0/0	1	0	0	0	1	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0042g0003	a0001	c0001	t0042	g0003	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0043g0001	a0001	c0001	t0043	g0001	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0044g0001	a0001	c0001	t0044	g0001	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0001c0001t0046g0004	a0001	c0001	t0046	g0004	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0006	a0002	c0002	t0004	g0006	0/0	12	1	0	11	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0008	a0002	c0002	t0004	g0008	0/0	10	3	1	6	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0009	a0002	c0002	t0004	g0009	0/0	10	0	0	10	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0027	a0002	c0002	t0004	g0027	0/0	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0028	a0002	c0002	t0004	g0028	0/0	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0060	a0002	c0002	t0004	g0060	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0065	a0002	c0002	t0004	g0065	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0066	a0002	c0002	t0004	g0066	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0004g0067	a0002	c0002	t0004	g0067	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0007g0015	a0002	c0002	t0007	g0015	0/0	3	2	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0007g0025	a0002	c0002	t0007	g0025	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0013g0026	a0002	c0002	t0013	g0026	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0013g0062	a0002	c0002	t0013	g0062	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0013g0063	a0002	c0002	t0013	g0063	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0014g0006	a0002	c0002	t0014	g0006	0/0	2	0	0	2	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0014g0059	a0002	c0002	t0014	g0059	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0014g0064	a0002	c0002	t0014	g0064	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0035g0061	a0002	c0002	t0035	g0061	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0045g0015	a0002	c0002	t0045	g0015	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0047g0006	a0002	c0002	t0047	g0006	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0048g0009	a0002	c0002	t0048	g0009	0/0	1	0	0	1	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0002c0002t0049g0006	a0002	c0002	t0049	g0006	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0003c0004t0003g0007	a0003	c0004	t0003	g0007	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0003c0004t0007g0007	a0003	c0004	t0007	g0007	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0003c0005t0003g0007	a0003	c0005	t0003	g0007	0/0	4	4	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0004c0003t0004g0006	a0004	c0003	t0004	g0006	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0004c0003t0004g0008	a0004	c0003	t0004	g0008	0/0	2	2	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0005c0006t0036g0032	a0005	c0006	t0036	g0032	0/0	1	0	1	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2
a0006c0007t0005g0001	a0006	c0007	t0005	g0001	0/0	1	0	0	0	0	1	MS4A2_chr11_60083664_60103467	MS4A2
a0007c0008t0034g0029	a0007	c0008	t0034	g0029	0/0	1	1	0	0	0	0	MS4A2_chr11_60083664_60103467	MS4A2

sampleid	haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename
HG00099	hp1	a0001	c0001	t0002	g0002	EUR	GBR	MS4A2_chr11_60083664_60103467	MS4A2
HG00099	hp2	a0001	c0001	t0002	g0002	EUR	GBR	MS4A2_chr11_60083664_60103467	MS4A2
HG00140	hp1	a0001	c0001	t0002	g0002	EUR	GBR	MS4A2_chr11_60083664_60103467	MS4A2
HG00140	hp2	a0001	c0001	t0003	g0003	EUR	GBR	MS4A2_chr11_60083664_60103467	MS4A2
HG00280	hp1	a0001	c0001	t0002	g0002	EUR	FIN	MS4A2_chr11_60083664_60103467	MS4A2
HG00280	hp2	a0001	c0001	t0002	g0002	EUR	FIN	MS4A2_chr11_60083664_60103467	MS4A2
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	MS4A2_chr11_60083664_60103467	MS4A2
HG00323	hp2	a0001	c0001	t0041	g0021	EUR	FIN	MS4A2_chr11_60083664_60103467	MS4A2
HG00408	hp1	a0001	c0001	t0006	g0005	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00408	hp2	a0001	c0001	t0005	g0001	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00423	hp1	a0001	c0001	t0008	g0001	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00423	hp2	a0001	c0001	t0003	g0003	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00438	hp1	a0001	c0001	t0046	g0004	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00438	hp2	a0001	c0001	t0001	g0045	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00544	hp1	a0001	c0001	t0003	g0003	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00544	hp2	a0002	c0002	t0004	g0009	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00558	hp2	a0002	c0002	t0004	g0027	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00597	hp1	a0002	c0002	t0004	g0028	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00597	hp2	a0002	c0002	t0004	g0028	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00609	hp1	a0001	c0001	t0024	g0035	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00609	hp2	a0001	c0001	t0001	g0033	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00621	hp1	a0002	c0002	t0048	g0009	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00621	hp2	a0002	c0002	t0004	g0006	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00639	hp1	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00639	hp2	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00642	hp1	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00642	hp2	a0001	c0001	t0001	g0004	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00673	hp1	a0001	c0001	t0001	g0004	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00673	hp2	a0001	c0001	t0006	g0005	EAS	CHS	MS4A2_chr11_60083664_60103467	MS4A2
HG00735	hp1	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00735	hp2	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00738	hp1	a0001	c0001	t0017	g0004	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00738	hp2	a0001	c0001	t0002	g0038	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00741	hp1	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01069	hp1	a0001	c0001	t0010	g0019	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01069	hp2	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01070	hp2	a0002	c0002	t0004	g0008	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01071	hp1	a0001	c0001	t0010	g0019	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01099	hp1	a0001	c0001	t0001	g0004	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01106	hp1	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01106	hp2	a0001	c0001	t0008	g0001	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01167	hp1	a0001	c0001	t0001	g0011	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01167	hp2	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01169	hp1	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01169	hp2	a0001	c0001	t0001	g0011	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01175	hp1	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01175	hp2	a0001	c0001	t0011	g0001	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01192	hp2	a0001	c0001	t0002	g0002	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01243	hp1	a0001	c0001	t0012	g0014	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01243	hp2	a0002	c0002	t0007	g0015	AMR	PUR	MS4A2_chr11_60083664_60103467	MS4A2
HG01255	hp1	a0001	c0001	t0001	g0004	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01255	hp2	a0001	c0001	t0002	g0002	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01256	hp1	a0001	c0001	t0002	g0002	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01256	hp2	a0001	c0001	t0007	g0003	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01257	hp1	a0001	c0001	t0001	g0004	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01257	hp2	a0001	c0001	t0002	g0002	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01258	hp1	a0001	c0001	t0003	g0003	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01258	hp2	a0001	c0001	t0001	g0004	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01261	hp1	a0005	c0006	t0036	g0032	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01261	hp2	a0001	c0001	t0002	g0002	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01346	hp2	a0001	c0001	t0002	g0020	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01358	hp1	a0001	c0001	t0002	g0020	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01358	hp2	a0001	c0001	t0005	g0001	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01361	hp2	a0001	c0001	t0003	g0056	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01433	hp2	a0001	c0001	t0002	g0002	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01496	hp1	a0001	c0001	t0002	g0002	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01496	hp2	a0001	c0001	t0003	g0001	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01516	hp1	a0001	c0001	t0002	g0002	EUR	IBS	MS4A2_chr11_60083664_60103467	MS4A2
HG01516	hp2	a0001	c0001	t0002	g0002	EUR	IBS	MS4A2_chr11_60083664_60103467	MS4A2
HG01517	hp1	a0001	c0001	t0003	g0003	EUR	IBS	MS4A2_chr11_60083664_60103467	MS4A2
HG01517	hp2	a0001	c0001	t0002	g0002	EUR	IBS	MS4A2_chr11_60083664_60103467	MS4A2
HG01884	hp1	a0001	c0001	t0021	g0021	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG01884	hp2	a0003	c0005	t0003	g0007	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG01891	hp1	a0001	c0001	t0033	g0030	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG01891	hp2	a0002	c0002	t0004	g0008	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01928	hp2	a0001	c0001	t0001	g0011	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01943	hp2	a0001	c0001	t0005	g0048	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01975	hp2	a0001	c0001	t0002	g0002	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01981	hp1	a0001	c0001	t0002	g0002	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02004	hp2	a0001	c0001	t0001	g0034	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02015	hp2	a0002	c0002	t0014	g0006	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02040	hp1	a0001	c0001	t0027	g0002	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02040	hp2	a0002	c0002	t0004	g0006	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02055	hp1	a0002	c0002	t0013	g0026	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02055	hp2	a0001	c0001	t0042	g0003	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02056	hp2	a0001	c0001	t0003	g0003	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02080	hp1	a0002	c0002	t0004	g0006	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02080	hp2	a0001	c0001	t0023	g0001	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02083	hp1	a0001	c0001	t0011	g0001	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02083	hp2	a0001	c0001	t0005	g0001	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02129	hp1	a0001	c0001	t0006	g0005	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02132	hp1	a0002	c0002	t0004	g0027	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02132	hp2	a0001	c0001	t0005	g0001	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02135	hp1	a0001	c0001	t0001	g0004	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02135	hp2	a0001	c0001	t0001	g0004	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02145	hp1	a0001	c0001	t0003	g0001	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02145	hp2	a0001	c0001	t0031	g0031	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02155	hp1	a0002	c0002	t0004	g0006	EAS	CDX	MS4A2_chr11_60083664_60103467	MS4A2
HG02155	hp2	a0001	c0001	t0002	g0002	EAS	CDX	MS4A2_chr11_60083664_60103467	MS4A2
HG02165	hp1	a0001	c0001	t0005	g0004	EAS	CDX	MS4A2_chr11_60083664_60103467	MS4A2
HG02165	hp2	a0001	c0001	t0003	g0003	EAS	CDX	MS4A2_chr11_60083664_60103467	MS4A2
HG02257	hp1	a0001	c0001	t0009	g0007	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02257	hp2	a0001	c0001	t0002	g0002	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02258	hp1	a0002	c0002	t0035	g0061	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02258	hp2	a0001	c0001	t0005	g0001	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02273	hp2	a0001	c0001	t0002	g0002	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02280	hp1	a0001	c0001	t0039	g0012	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02280	hp2	a0004	c0003	t0004	g0006	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02293	hp2	a0001	c0001	t0002	g0002	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02300	hp2	a0001	c0001	t0011	g0001	AMR	PEL	MS4A2_chr11_60083664_60103467	MS4A2
HG02451	hp1	a0002	c0002	t0004	g0008	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02451	hp2	a0001	c0001	t0009	g0007	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02523	hp1	a0002	c0002	t0004	g0006	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02523	hp2	a0001	c0001	t0005	g0001	EAS	KHV	MS4A2_chr11_60083664_60103467	MS4A2
HG02572	hp1	a0001	c0001	t0003	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02572	hp2	a0001	c0001	t0006	g0013	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02602	hp1	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02602	hp2	a0001	c0001	t0003	g0054	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02615	hp1	a0001	c0001	t0005	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02622	hp1	a0002	c0002	t0007	g0015	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02622	hp2	a0003	c0004	t0003	g0007	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02630	hp1	a0001	c0001	t0005	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02630	hp2	a0001	c0001	t0003	g0012	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02647	hp1	a0001	c0001	t0006	g0042	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02647	hp2	a0007	c0008	t0034	g0029	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02683	hp2	a0001	c0001	t0002	g0041	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02698	hp1	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02698	hp2	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02717	hp1	a0001	c0001	t0016	g0016	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02717	hp2	a0001	c0001	t0005	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02723	hp1	a0001	c0001	t0003	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02723	hp2	a0001	c0001	t0015	g0011	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02735	hp1	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02738	hp1	a0001	c0001	t0008	g0001	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG02809	hp1	a0001	c0001	t0012	g0014	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02809	hp2	a0003	c0004	t0007	g0007	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02818	hp1	a0002	c0002	t0007	g0025	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02818	hp2	a0001	c0001	t0005	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02886	hp1	a0001	c0001	t0003	g0057	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02886	hp2	a0001	c0001	t0003	g0012	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02895	hp1	a0002	c0002	t0007	g0015	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02895	hp2	a0001	c0001	t0003	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02896	hp1	a0001	c0001	t0028	g0018	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02896	hp2	a0001	c0001	t0016	g0016	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02897	hp1	a0001	c0001	t0003	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02897	hp2	a0001	c0001	t0016	g0016	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG02922	hp1	a0001	c0001	t0003	g0024	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG02922	hp2	a0001	c0001	t0003	g0001	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG02965	hp1	a0002	c0002	t0007	g0025	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG02965	hp2	a0003	c0004	t0007	g0007	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG02970	hp1	a0001	c0001	t0003	g0012	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG02970	hp2	a0004	c0003	t0004	g0008	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG02976	hp1	a0001	c0001	t0015	g0001	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG02976	hp2	a0003	c0005	t0003	g0007	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03017	hp1	a0001	c0001	t0003	g0003	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03017	hp2	a0006	c0007	t0005	g0001	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03041	hp1	a0001	c0001	t0015	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG03041	hp2	a0001	c0001	t0007	g0004	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG03098	hp1	a0002	c0002	t0045	g0015	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03098	hp2	a0002	c0002	t0013	g0026	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03130	hp1	a0001	c0001	t0012	g0014	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03130	hp2	a0001	c0001	t0005	g0001	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03139	hp1	a0001	c0001	t0005	g0001	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03139	hp2	a0002	c0002	t0004	g0006	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03195	hp1	a0002	c0002	t0004	g0008	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03195	hp2	a0001	c0001	t0005	g0001	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03209	hp1	a0001	c0001	t0006	g0013	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03209	hp2	a0001	c0001	t0040	g0001	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03225	hp1	a0001	c0001	t0030	g0001	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03225	hp2	a0001	c0001	t0003	g0017	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03239	hp1	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03239	hp2	a0001	c0001	t0002	g0068	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03453	hp1	a0001	c0001	t0003	g0017	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03453	hp2	a0001	c0001	t0029	g0018	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03486	hp1	a0001	c0001	t0043	g0001	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03486	hp2	a0001	c0001	t0003	g0001	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03491	hp1	a0001	c0001	t0001	g0004	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03516	hp1	a0001	c0001	t0003	g0001	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03516	hp2	a0003	c0005	t0003	g0007	AFR	ESN	MS4A2_chr11_60083664_60103467	MS4A2
HG03540	hp1	a0001	c0001	t0005	g0001	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG03540	hp2	a0001	c0001	t0012	g0014	AFR	GWD	MS4A2_chr11_60083664_60103467	MS4A2
HG03579	hp1	a0001	c0001	t0003	g0001	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03579	hp2	a0002	c0002	t0014	g0059	AFR	MSL	MS4A2_chr11_60083664_60103467	MS4A2
HG03654	hp1	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03654	hp2	a0001	c0001	t0005	g0004	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03669	hp1	a0001	c0001	t0006	g0013	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03669	hp2	a0001	c0001	t0002	g0040	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03688	hp1	a0001	c0001	t0002	g0002	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG03688	hp2	a0001	c0001	t0019	g0001	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG03704	hp1	a0001	c0001	t0005	g0004	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03704	hp2	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03710	hp1	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03710	hp2	a0001	c0001	t0002	g0002	SAS	PJL	MS4A2_chr11_60083664_60103467	MS4A2
HG03831	hp1	a0001	c0001	t0006	g0013	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG03831	hp2	a0001	c0001	t0005	g0001	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG03834	hp1	a0001	c0001	t0003	g0003	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG03834	hp2	a0001	c0001	t0002	g0002	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG03927	hp1	a0001	c0001	t0002	g0002	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG03942	hp2	a0001	c0001	t0002	g0002	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG04115	hp1	a0001	c0001	t0005	g0058	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG04115	hp2	a0001	c0001	t0005	g0004	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG04184	hp1	a0001	c0001	t0003	g0003	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG04184	hp2	a0001	c0001	t0003	g0003	SAS	BEB	MS4A2_chr11_60083664_60103467	MS4A2
HG04199	hp1	a0001	c0001	t0022	g0002	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG04199	hp2	a0001	c0001	t0019	g0001	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG04204	hp1	a0001	c0001	t0003	g0052	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG04204	hp2	a0001	c0001	t0003	g0003	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG04228	hp1	a0001	c0001	t0002	g0037	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
HG04228	hp2	a0001	c0001	t0002	g0002	SAS	STU	MS4A2_chr11_60083664_60103467	MS4A2
NA18522	hp1	a0001	c0001	t0003	g0001	AFR	YRI	MS4A2_chr11_60083664_60103467	MS4A2
NA18522	hp2	a0001	c0001	t0003	g0001	AFR	YRI	MS4A2_chr11_60083664_60103467	MS4A2
NA18747	hp1	a0001	c0001	t0002	g0002	EAS	CHB	MS4A2_chr11_60083664_60103467	MS4A2
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	MS4A2_chr11_60083664_60103467	MS4A2
NA18906	hp1	a0002	c0002	t0013	g0063	AFR	YRI	MS4A2_chr11_60083664_60103467	MS4A2
NA18906	hp2	a0001	c0001	t0003	g0001	AFR	YRI	MS4A2_chr11_60083664_60103467	MS4A2
NA18940	hp1	a0001	c0001	t0008	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18940	hp2	a0001	c0001	t0044	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18941	hp1	a0001	c0001	t0001	g0011	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18941	hp2	a0002	c0002	t0004	g0065	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18942	hp1	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18943	hp2	a0001	c0001	t0008	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18944	hp1	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18944	hp2	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18945	hp1	a0001	c0001	t0002	g0010	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18945	hp2	a0001	c0001	t0011	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18947	hp1	a0001	c0001	t0005	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18948	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18948	hp2	a0001	c0001	t0032	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18949	hp2	a0001	c0001	t0018	g0002	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18950	hp1	a0002	c0002	t0004	g0008	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18950	hp2	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18951	hp2	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18953	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18953	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18954	hp2	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18957	hp2	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18962	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18962	hp2	a0001	c0001	t0001	g0047	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18966	hp2	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18967	hp1	a0001	c0001	t0001	g0004	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18967	hp2	a0002	c0002	t0004	g0008	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18968	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18969	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18969	hp2	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18970	hp1	a0001	c0001	t0002	g0010	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18970	hp2	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18971	hp2	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18973	hp1	a0001	c0001	t0005	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18978	hp1	a0001	c0001	t0017	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18978	hp2	a0002	c0002	t0004	g0008	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18979	hp1	a0002	c0002	t0004	g0006	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18979	hp2	a0001	c0001	t0002	g0036	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18980	hp1	a0001	c0001	t0017	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18980	hp2	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18981	hp1	a0002	c0002	t0014	g0006	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18981	hp2	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18982	hp2	a0002	c0002	t0004	g0066	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18983	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18984	hp1	a0001	c0001	t0001	g0004	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18984	hp2	a0001	c0001	t0007	g0055	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18985	hp1	a0001	c0001	t0001	g0011	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18985	hp2	a0001	c0001	t0009	g0023	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18986	hp2	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18988	hp2	a0002	c0002	t0047	g0006	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18989	hp1	a0001	c0001	t0018	g0010	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18989	hp2	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18990	hp2	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18991	hp1	a0001	c0001	t0002	g0002	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18991	hp2	a0001	c0001	t0001	g0004	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18992	hp1	a0002	c0002	t0004	g0006	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18992	hp2	a0001	c0001	t0008	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18994	hp2	a0002	c0002	t0004	g0006	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18995	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18995	hp2	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18997	hp1	a0001	c0001	t0002	g0039	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18997	hp2	a0002	c0002	t0014	g0064	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18998	hp1	a0001	c0001	t0005	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18998	hp2	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19000	hp2	a0001	c0001	t0005	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19002	hp2	a0001	c0001	t0002	g0010	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19003	hp1	a0001	c0001	t0003	g0049	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19003	hp2	a0001	c0001	t0001	g0004	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19007	hp2	a0001	c0001	t0005	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19009	hp1	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19010	hp1	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19010	hp2	a0001	c0001	t0008	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19011	hp1	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19011	hp2	a0002	c0002	t0004	g0008	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19030	hp1	a0001	c0001	t0038	g0046	AFR	LWK	MS4A2_chr11_60083664_60103467	MS4A2
NA19030	hp2	a0002	c0002	t0013	g0062	AFR	LWK	MS4A2_chr11_60083664_60103467	MS4A2
NA19043	hp1	a0001	c0001	t0003	g0022	AFR	LWK	MS4A2_chr11_60083664_60103467	MS4A2
NA19043	hp2	a0001	c0001	t0003	g0022	AFR	LWK	MS4A2_chr11_60083664_60103467	MS4A2
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19058	hp1	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19058	hp2	a0001	c0001	t0037	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19059	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19059	hp2	a0002	c0002	t0004	g0006	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19060	hp1	a0001	c0001	t0008	g0004	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19060	hp2	a0002	c0002	t0004	g0067	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19062	hp1	a0001	c0001	t0003	g0003	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19062	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19063	hp1	a0001	c0001	t0008	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19064	hp1	a0002	c0002	t0004	g0008	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19064	hp2	a0001	c0001	t0002	g0002	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19065	hp1	a0001	c0001	t0002	g0002	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19067	hp2	a0001	c0001	t0026	g0002	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19068	hp1	a0001	c0001	t0001	g0051	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19072	hp1	a0001	c0001	t0001	g0004	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19072	hp2	a0002	c0002	t0004	g0006	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19075	hp1	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19075	hp2	a0002	c0002	t0004	g0060	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19077	hp2	a0002	c0002	t0004	g0006	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19078	hp2	a0001	c0001	t0002	g0010	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19079	hp1	a0001	c0001	t0005	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19079	hp2	a0002	c0002	t0004	g0008	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19080	hp1	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19080	hp2	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19081	hp2	a0001	c0001	t0002	g0002	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19082	hp2	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19083	hp1	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19083	hp2	a0002	c0002	t0004	g0009	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19085	hp2	a0001	c0001	t0002	g0010	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19090	hp1	a0001	c0001	t0006	g0005	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19091	hp1	a0001	c0001	t0003	g0023	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19091	hp2	a0001	c0001	t0020	g0044	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA19240	hp1	a0003	c0004	t0003	g0007	AFR	YRI	MS4A2_chr11_60083664_60103467	MS4A2
NA19240	hp2	a0003	c0005	t0003	g0007	AFR	YRI	MS4A2_chr11_60083664_60103467	MS4A2
NA20129	hp1	a0001	c0001	t0009	g0007	AFR	ASW	MS4A2_chr11_60083664_60103467	MS4A2
NA20129	hp2	a0001	c0001	t0003	g0050	AFR	ASW	MS4A2_chr11_60083664_60103467	MS4A2
NA20752	hp1	a0001	c0001	t0010	g0002	EUR	TSI	MS4A2_chr11_60083664_60103467	MS4A2
NA20752	hp2	a0001	c0001	t0025	g0002	EUR	TSI	MS4A2_chr11_60083664_60103467	MS4A2
NA20805	hp1	a0001	c0001	t0003	g0053	EUR	TSI	MS4A2_chr11_60083664_60103467	MS4A2
NA20805	hp2	a0001	c0001	t0002	g0002	EUR	TSI	MS4A2_chr11_60083664_60103467	MS4A2
NA20905	hp1	a0001	c0001	t0003	g0003	SAS	GIH	MS4A2_chr11_60083664_60103467	MS4A2
NA20905	hp2	a0001	c0001	t0005	g0001	SAS	GIH	MS4A2_chr11_60083664_60103467	MS4A2
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG01123	hp2	a0001	c0001	t0003	g0001	AMR	CLM	MS4A2_chr11_60083664_60103467	MS4A2
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02109	hp2	a0001	c0001	t0003	g0001	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02486	hp1	a0004	c0003	t0004	g0008	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG02486	hp2	a0001	c0001	t0009	g0007	AFR	ACB	MS4A2_chr11_60083664_60103467	MS4A2
HG06807	hp1	a0001	c0001	t0003	g0001	AFR	USA	MS4A2_chr11_60083664_60103467	MS4A2
HG06807	hp2	a0004	c0003	t0004	g0006	AFR	USA	MS4A2_chr11_60083664_60103467	MS4A2
NA18955	hp1	a0001	c0001	t0002	g0010	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA18955	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MS4A2_chr11_60083664_60103467	MS4A2
NA20300	hp1	a0002	c0002	t0049	g0006	AFR	USA	MS4A2_chr11_60083664_60103467	MS4A2
NA20300	hp2	a0001	c0001	t0003	g0024	AFR	USA	MS4A2_chr11_60083664_60103467	MS4A2
NA21309	hp1	a0001	c0001	t0010	g0002	AFR	LWK	MS4A2_chr11_60083664_60103467	MS4A2
NA21309	hp2	a0001	c0001	t0002	g0002	AFR	LWK	MS4A2_chr11_60083664_60103467	MS4A2
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	MS4A2_chr11_60083664_60103467	MS4A2
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0043	REF	REF	MS4A2_chr11_60083664_60103467	MS4A2

chr:pos	ref	alt	# # of ahapid:amio-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna_pos_length	cds_pos_length	aa_pos_length	chr	pos
chr11:60089747	C C	G G	1	a0007 a0007	1	HG02647.hp2 HG02647.hp2	missense_variant	MODERATE	c.112C>G c.112C>G	p.Leu38Val p.Leu38Val	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	2/7	214/3648	112/735	38/244	chr11	60089747
chr11:60089819	G G	T T	1	a0006 a0006	1	HG03017.hp2 HG03017.hp2	missense_variant&splice_region_variant	MODERATE	c.184G>T c.184G>T	p.Gly62Trp p.Gly62Trp	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	2/7	286/3648	184/735	62/244	chr11	60089819
chr11:60093434	G G	A A	1	a0005 a0005	1	HG01261.hp1 HG01261.hp1	missense_variant	MODERATE	c.413G>A c.413G>A	p.Ser138Asn p.Ser138Asn	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/7	515/3648	413/735	138/244	chr11	60093434
chr11:60093449	C C	T T	1	a0003 a0003	8	HG01884.hp2 HG02622.hp2 HG02809.hp2 others(5): Show HG01884.hp2 HG02622.hp2 HG02809.hp2 HG02965.hp2 HG02976.hp2 HG03516.hp2 NA19240.hp1 NA19240.hp2	missense_variant	MODERATE	c.428C>T c.428C>T	p.Thr143Met p.Thr143Met	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/7	530/3648	428/735	143/244	chr11	60093449
chr11:60094059	C C	A A	1	a0004 a0004	4	HG02280.hp2 HG02486.hp1 HG02970.hp2 others(1): Show HG02280.hp2 HG02486.hp1 HG02970.hp2 HG06807.hp2	missense_variant	MODERATE	c.633C>A c.633C>A	p.Asn211Lys p.Asn211Lys	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/7	735/3648	633/735	211/244	chr11	60094059
chr11:60095631	A A	G G	2	a0002 a0004 a0002 a0004	62	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(59): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01243.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	missense_variant	MODERATE	c.710A>G c.710A>G	p.Glu237Gly p.Glu237Gly	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	812/3648	710/735	237/244	chr11	60095631

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna_pos_length	cds_pos_length	aa_pos_length	distance	status	chr	pos
chr11:60088780	T T	C C	1	a0005c0006 a0005c0006	1	HG01261.hp1 HG01261.hp1	synonymous_variant	LOW	c.15T>C c.15T>C	p.Ser5Ser p.Ser5Ser	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/7	117/3648	15/735	5/244			chr11	60088780
chr11:60089743	C C	G G	1	a0003c0005 a0003c0005	4	HG01884.hp2 HG02976.hp2 HG03516.hp2 others(1): Show HG01884.hp2 HG02976.hp2 HG03516.hp2 NA19240.hp2	synonymous_variant	LOW	c.108C>G c.108C>G	p.Gly36Gly p.Gly36Gly	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	2/7	210/3648	108/735	36/244			chr11	60089743

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr11:60088763	A A	C C	1	a0002c0002t0049 a0002c0002t0049	1	NA20300.hp1 NA20300.hp1	5_prime_UTR_variant	MODIFIER	c.-3A>C c.-3A>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/7	3		chr11	60088763
chr11:60095780	C C	T T	6	a0002c0002t0004 a0002c0002t0014 a0002c0002t0047 others(3): Show a0002c0002t0004 a0002c0002t0014 a0002c0002t0047 a0002c0002t0048 a0002c0002t0049 a0004c0003t0004	51	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(48): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02970.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.124C>T c.124C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	124		chr11	60095780
chr11:60095868	T T	A A	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.212T>A c.212T>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	212		chr11	60095868
chr11:60095869	G G	C C	1	a0001c0001t0021 a0001c0001t0021	1	HG01884.hp1 HG01884.hp1	3_prime_UTR_variant	MODIFIER	c.213G>C c.213G>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	213		chr11	60095869
chr11:60095878	T T	A A	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.222T>A c.222T>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	222		chr11	60095878
chr11:60095879	A A	T T	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.223A>T c.223A>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	223		chr11	60095879
chr11:60095894	T T	A A	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.238T>A c.238T>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	238		chr11	60095894
chr11:60095900	G G	T T	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.244G>T c.244G>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	244		chr11	60095900
chr11:60095910	C C	A A	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.254C>A c.254C>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	254		chr11	60095910
chr11:60095911	A A	C C	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.255A>C c.255A>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	255		chr11	60095911
chr11:60095914	T T	A A	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.258T>A c.258T>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	258		chr11	60095914
chr11:60095963	A A	G G	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.307A>G c.307A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	307		chr11	60095963
chr11:60095964	A A	C C	1	a0001c0001t0046 a0001c0001t0046	1	HG00438.hp1 HG00438.hp1	3_prime_UTR_variant	MODIFIER	c.308A>C c.308A>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	308		chr11	60095964
chr11:60095965	A A	G G	1	a0002c0002t0048 a0002c0002t0048	1	HG00621.hp1 HG00621.hp1	3_prime_UTR_variant	MODIFIER	c.309A>G c.309A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	309		chr11	60095965
chr11:60095977	GAAAGTTG others(23): Show GAAAGTTGAGTTAAACTTTGACAGTTTGATA	G G	1	a0001c0001t0020 a0001c0001t0020	1	NA19091.hp2 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.323_352delAAGTTG others(24): Show c.323_352delAAGTTGAGTTAAACTTTGACAGTTTGATAA	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	323	INFO_REALIGN_3_PRIME	chr11	60095977
chr11:60096024	G G	GT GT	5	a0001c0001t0017 a0001c0001t0043 a0001c0001t0044 others(2): Show a0001c0001t0017 a0001c0001t0043 a0001c0001t0044 a0002c0002t0045 a0002c0002t0047	7	HG00738.hp1 HG03098.hp1 HG03486.hp1 others(4): Show HG00738.hp1 HG03098.hp1 HG03486.hp1 NA18940.hp2 NA18978.hp1 NA18980.hp1 NA18988.hp2	3_prime_UTR_variant	MODIFIER	c.383dupT c.383dupT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	384	INFO_REALIGN_3_PRIME	chr11	60096024
chr11:60096024	GT GT	G G	12	a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 others(9): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 a0001c0001t0018 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029	106	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02080.hp2 HG02129.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02572.hp2 HG02602.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02896.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19075.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.383delT c.383delT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	383	INFO_REALIGN_3_PRIME	chr11	60096024
chr11:60096053	G G	C C	1	a0001c0001t0030 a0001c0001t0030	1	HG03225.hp1 HG03225.hp1	3_prime_UTR_variant	MODIFIER	c.397G>C c.397G>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	397		chr11	60096053
chr11:60096147	T T	G G	1	a0001c0001t0031 a0001c0001t0031	1	HG02145.hp2 HG02145.hp2	3_prime_UTR_variant	MODIFIER	c.491T>G c.491T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	491		chr11	60096147
chr11:60096168	C C	T T	1	a0001c0001t0042 a0001c0001t0042	1	HG02055.hp2 HG02055.hp2	3_prime_UTR_variant	MODIFIER	c.512C>T c.512C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	512		chr11	60096168
chr11:60096559	G G	A A	1	a0001c0001t0022 a0001c0001t0022	1	HG04199.hp1 HG04199.hp1	3_prime_UTR_variant	MODIFIER	c.903G>A c.903G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	903		chr11	60096559
chr11:60096609	C C	T T	2	a0001c0001t0028 a0001c0001t0029 a0001c0001t0028 a0001c0001t0029	2	HG02896.hp1 HG03453.hp2 HG02896.hp1 HG03453.hp2	3_prime_UTR_variant	MODIFIER	c.953C>T c.953C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	953		chr11	60096609
chr11:60096612	G G	A A	1	a0001c0001t0032 a0001c0001t0032	1	NA18948.hp2 NA18948.hp2	3_prime_UTR_variant	MODIFIER	c.956G>A c.956G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	956		chr11	60096612
chr11:60096650	G G	A A	2	a0001c0001t0033 a0007c0008t0034 a0001c0001t0033 a0007c0008t0034	2	HG01891.hp1 HG02647.hp2 HG01891.hp1 HG02647.hp2	3_prime_UTR_variant	MODIFIER	c.994G>A c.994G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	994		chr11	60096650
chr11:60096711	G G	A A	1	a0002c0002t0035 a0002c0002t0035	1	HG02258.hp1 HG02258.hp1	3_prime_UTR_variant	MODIFIER	c.1055G>A c.1055G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1055		chr11	60096711
chr11:60096784	G G	A A	2	a0001c0001t0031 a0005c0006t0036 a0001c0001t0031 a0005c0006t0036	2	HG01261.hp1 HG02145.hp2 HG01261.hp1 HG02145.hp2	3_prime_UTR_variant	MODIFIER	c.1128G>A c.1128G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1128		chr11	60096784
chr11:60096806	C C	G G	47	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(44): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0002c0002t0004 a0002c0002t0007 a0002c0002t0013 a0002c0002t0014 a0002c0002t0035 a0002c0002t0045 a0002c0002t0047 a0002c0002t0048 a0002c0002t0049 a0003c0004t0003 a0003c0004t0007 a0003c0005t0003 a0004c0003t0004 a0005c0006t0036 a0006c0007t0005 a0007c0008t0034	297	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(294): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01123.hp2 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp2 HG01975.hp2 HG01981.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02080.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18947.hp1 NA18948.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18962.hp1 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19058.hp1 NA19059.hp1 NA19059.hp2 NA19060.hp2 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1150C>G c.1150C>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1150		chr11	60096806
chr11:60096886	C C	CA CA	6	a0001c0001t0008 a0001c0001t0009 a0001c0001t0019 others(3): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0019 a0001c0001t0023 a0001c0001t0038 a0001c0001t0039	19	HG00423.hp1 HG01106.hp2 HG02080.hp2 others(16): Show HG00423.hp1 HG01106.hp2 HG02080.hp2 HG02257.hp1 HG02280.hp1 HG02451.hp2 HG02486.hp2 HG02738.hp1 HG03688.hp2 HG04199.hp2 NA18940.hp1 NA18943.hp2 NA18985.hp2 NA18992.hp2 NA19010.hp2 NA19030.hp1 NA19060.hp1 NA19063.hp1 NA20129.hp1	3_prime_UTR_variant	MODIFIER	c.1254dupA c.1254dupA	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1255	INFO_REALIGN_3_PRIME	chr11	60096886
chr11:60096886	CA CA	C C	23	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(20): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0029 a0001c0001t0041 a0002c0002t0004 a0002c0002t0007 a0002c0002t0013 a0002c0002t0035 a0002c0002t0045 a0002c0002t0047 a0002c0002t0048 a0002c0002t0049 a0003c0004t0007 a0004c0003t0004	175	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(172): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp1 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18950.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18967.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp2 NA18982.hp2 NA18984.hp2 NA18986.hp2 NA18988.hp2 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19078.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19090.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1254delA c.1254delA	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1254	INFO_REALIGN_3_PRIME	chr11	60096886
chr11:60097191	A A	C C	1	a0001c0001t0039 a0001c0001t0039	1	HG02280.hp1 HG02280.hp1	3_prime_UTR_variant	MODIFIER	c.1535A>C c.1535A>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1535		chr11	60097191
chr11:60097241	C C	T T	2	a0001c0001t0016 a0001c0001t0038 a0001c0001t0016 a0001c0001t0038	4	HG02717.hp1 HG02896.hp2 HG02897.hp2 others(1): Show HG02717.hp1 HG02896.hp2 HG02897.hp2 NA19030.hp1	3_prime_UTR_variant	MODIFIER	c.1585C>T c.1585C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1585		chr11	60097241
chr11:60097255	A A	G G	1	a0001c0001t0037 a0001c0001t0037	1	NA19058.hp2 NA19058.hp2	3_prime_UTR_variant	MODIFIER	c.1599A>G c.1599A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1599		chr11	60097255
chr11:60097308	C C	T T	1	a0001c0001t0027 a0001c0001t0027	1	HG02040.hp1 HG02040.hp1	3_prime_UTR_variant	MODIFIER	c.1652C>T c.1652C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1652		chr11	60097308
chr11:60097328	A A	G G	1	a0001c0001t0012 a0001c0001t0012	4	HG01243.hp1 HG02809.hp1 HG03130.hp1 others(1): Show HG01243.hp1 HG02809.hp1 HG03130.hp1 HG03540.hp2	3_prime_UTR_variant	MODIFIER	c.1672A>G c.1672A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1672		chr11	60097328
chr11:60097372	T T	G G	2	a0001c0001t0021 a0001c0001t0041 a0001c0001t0021 a0001c0001t0041	2	HG00323.hp2 HG01884.hp1 HG00323.hp2 HG01884.hp1	3_prime_UTR_variant	MODIFIER	c.1716T>G c.1716T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1716		chr11	60097372
chr11:60097405	T T	C C	1	a0001c0001t0025 a0001c0001t0025	1	NA20752.hp2 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.1749T>C c.1749T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1749		chr11	60097405
chr11:60097423	G G	A A	1	a0001c0001t0012 a0001c0001t0012	4	HG01243.hp1 HG02809.hp1 HG03130.hp1 others(1): Show HG01243.hp1 HG02809.hp1 HG03130.hp1 HG03540.hp2	3_prime_UTR_variant	MODIFIER	c.1767G>A c.1767G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1767		chr11	60097423
chr11:60097536	T T	G G	1	a0001c0001t0040 a0001c0001t0040	1	HG03209.hp2 HG03209.hp2	3_prime_UTR_variant	MODIFIER	c.1880T>G c.1880T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	1880		chr11	60097536
chr11:60097674	C C	T T	7	a0001c0001t0005 a0001c0001t0015 a0001c0001t0019 others(4): Show a0001c0001t0005 a0001c0001t0015 a0001c0001t0019 a0001c0001t0020 a0001c0001t0040 a0001c0001t0044 a0006c0007t0005	37	HG00408.hp2 HG01358.hp2 HG01943.hp2 others(34): Show HG00408.hp2 HG01358.hp2 HG01943.hp2 HG02083.hp2 HG02132.hp2 HG02165.hp1 HG02258.hp2 HG02523.hp2 HG02615.hp1 HG02630.hp1 HG02717.hp2 HG02723.hp2 HG02818.hp2 HG02976.hp1 HG03017.hp2 HG03041.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03540.hp1 HG03654.hp2 HG03688.hp2 HG03704.hp1 HG03831.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp2 NA18940.hp2 NA18947.hp1 NA18973.hp1 NA18998.hp1 NA19000.hp2 NA19007.hp2 NA19079.hp1 NA19091.hp2 NA20905.hp2	3_prime_UTR_variant	MODIFIER	c.2018C>T c.2018C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	2018		chr11	60097674
chr11:60097909	G G	C C	1	a0001c0001t0026 a0001c0001t0026	1	NA19067.hp2 NA19067.hp2	3_prime_UTR_variant	MODIFIER	c.2253G>C c.2253G>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	2253		chr11	60097909
chr11:60098003	C C	A A	2	a0001c0001t0016 a0001c0001t0038 a0001c0001t0016 a0001c0001t0038	4	HG02717.hp1 HG02896.hp2 HG02897.hp2 others(1): Show HG02717.hp1 HG02896.hp2 HG02897.hp2 NA19030.hp1	3_prime_UTR_variant	MODIFIER	c.2347C>A c.2347C>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	2347		chr11	60098003
chr11:60098198	T T	C C	7	a0001c0001t0002 a0001c0001t0010 a0001c0001t0018 others(4): Show a0001c0001t0002 a0001c0001t0010 a0001c0001t0018 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027	78	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(75): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02602.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG03239.hp1 HG03239.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18945.hp1 NA18949.hp2 NA18955.hp1 NA18970.hp1 NA18979.hp2 NA18989.hp1 NA18991.hp1 NA18997.hp1 NA19002.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19078.hp2 NA19081.hp2 NA19085.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.2542T>C c.2542T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	2542		chr11	60098198
chr11:60098286	A A	G G	1	a0007c0008t0034 a0007c0008t0034	1	HG02647.hp2 HG02647.hp2	3_prime_UTR_variant	MODIFIER	c.2630A>G c.2630A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	2630		chr11	60098286
chr11:60098360	C C	A A	1	a0001c0001t0010 a0001c0001t0010	4	HG01069.hp1 HG01071.hp1 NA20752.hp1 others(1): Show HG01069.hp1 HG01071.hp1 NA20752.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.2704C>A c.2704C>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	2704		chr11	60098360
chr11:60098384	C C	A A	1	a0002c0002t0013 a0002c0002t0013	4	HG02055.hp1 HG03098.hp2 NA18906.hp1 others(1): Show HG02055.hp1 HG03098.hp2 NA18906.hp1 NA19030.hp2	3_prime_UTR_variant	MODIFIER	c.2728C>A c.2728C>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	2728		chr11	60098384
chr11:60098457	A A	G G	1	a0002c0002t0049 a0002c0002t0049	1	NA20300.hp1 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.2801A>G c.2801A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	7/7	2801		chr11	60098457

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr11:60088849	C C	T T	1	a0001c0001t0002g0068 a0001c0001t0002g0068	1	HG03239.hp2 HG03239.hp2	intron_variant	MODIFIER	c.56+28C>T c.56+28C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/6		chr11	60088849
chr11:60088997	T T	C C	2	a0001c0001t0033g0030 a0007c0008t0034g0029 a0001c0001t0033g0030 a0007c0008t0034g0029	2	HG01891.hp1 HG02647.hp2 HG01891.hp1 HG02647.hp2	intron_variant	MODIFIER	c.56+176T>C c.56+176T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/6		chr11	60088997
chr11:60089192	AT AT	A A	5	a0001c0001t0003g0012 a0001c0001t0003g0017 a0001c0001t0031g0031 others(2): Show a0001c0001t0003g0012 a0001c0001t0003g0017 a0001c0001t0031g0031 a0001c0001t0039g0012 a0005c0006t0036g0032	8	HG01261.hp1 HG02145.hp2 HG02280.hp1 others(5): Show HG01261.hp1 HG02145.hp2 HG02280.hp1 HG02630.hp2 HG02886.hp2 HG02970.hp1 HG03225.hp2 HG03453.hp1	intron_variant	MODIFIER	c.56+373delT c.56+373delT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/6	INFO_REALIGN_3_PRIME	chr11	60089192
chr11:60089208	C C	T T	24	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(21): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	62	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(59): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01243.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.56+387C>T c.56+387C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/6		chr11	60089208
chr11:60089223	G G	A A	1	a0002c0002t0014g0059 a0002c0002t0014g0059	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.56+402G>A c.56+402G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/6		chr11	60089223
chr11:60089554	T T	G G	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	HG00609.hp2 HG00609.hp2	intron_variant	MODIFIER	c.57-138T>G c.57-138T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/6		chr11	60089554
chr11:60089569	T T	C C	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG02004.hp2 HG02004.hp2	intron_variant	MODIFIER	c.57-123T>C c.57-123T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	1/6		chr11	60089569
chr11:60089938	A A	G G	1	a0005c0006t0036g0032 a0005c0006t0036g0032	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.186+117A>G c.186+117A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	2/6		chr11	60089938
chr11:60090108	G G	A A	24	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(21): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0006g0042 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018	105	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(102): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02129.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02572.hp2 HG02602.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02896.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19075.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.187-228G>A c.187-228G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	2/6		chr11	60090108
chr11:60090232	A A	G G	1	a0001c0001t0005g0058 a0001c0001t0005g0058	1	HG04115.hp1 HG04115.hp1	intron_variant	MODIFIER	c.187-104A>G c.187-104A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	2/6		chr11	60090232
chr11:60090314	A A	G G	1	a0001c0001t0003g0057 a0001c0001t0003g0057	1	HG02886.hp1 HG02886.hp1	intron_variant	MODIFIER	c.187-22A>G c.187-22A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	2/6		chr11	60090314
chr11:60090563	C C	G G	29	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(26): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0003g0012 a0001c0001t0003g0017 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0006g0042 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018 a0001c0001t0031g0031 a0001c0001t0039g0012 a0005c0006t0036g0032	113	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(110): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02129.hp1 HG02145.hp2 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02572.hp2 HG02602.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02886.hp2 HG02896.hp1 HG02970.hp1 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19075.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.321+93C>G c.321+93C>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60090563
chr11:60090868	A A	G G	111	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0011 others(108): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0003g0001 a0001c0001t0003g0003 a0001c0001t0003g0012 a0001c0001t0003g0017 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0056 a0001c0001t0003g0057 a0001c0001t0005g0001 a0001c0001t0005g0004 a0001c0001t0005g0048 a0001c0001t0005g0058 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0006g0042 a0001c0001t0007g0003 a0001c0001t0007g0004 a0001c0001t0007g0055 a0001c0001t0008g0001 a0001c0001t0008g0004 a0001c0001t0009g0007 a0001c0001t0009g0023 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0011g0001 a0001c0001t0012g0014 a0001c0001t0015g0001 a0001c0001t0015g0011 a0001c0001t0016g0016 a0001c0001t0017g0001 a0001c0001t0017g0004 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0019g0001 a0001c0001t0020g0044 a0001c0001t0021g0021 a0001c0001t0022g0002 a0001c0001t0023g0001 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018 a0001c0001t0030g0001 a0001c0001t0031g0031 a0001c0001t0032g0001 a0001c0001t0033g0030 a0001c0001t0037g0001 a0001c0001t0038g0046 a0001c0001t0039g0012 a0001c0001t0040g0001 a0001c0001t0041g0021 a0001c0001t0042g0003 a0001c0001t0043g0001 a0001c0001t0044g0001 a0001c0001t0046g0004 a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0003c0004t0003g0007 a0003c0004t0007g0007 a0003c0005t0003g0007 a0004c0003t0004g0006 a0004c0003t0004g0008 a0005c0006t0036g0032 a0006c0007t0005g0001 a0007c0008t0034g0029	417	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(414): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19058.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.321+398A>G c.321+398A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60090868
chr11:60090949	T T	C C	24	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(21): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	62	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(59): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01243.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.321+479T>C c.321+479T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60090949
chr11:60091024	G G	A A	23	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(20): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018	104	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(101): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02129.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02572.hp2 HG02602.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02896.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19075.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.321+554G>A c.321+554G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091024
chr11:60091103	A A	C C	24	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(21): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	62	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(59): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01243.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.321+633A>C c.321+633A>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091103
chr11:60091239	A A	T T	55	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(52): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0003g0012 a0001c0001t0003g0017 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0006g0042 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018 a0001c0001t0031g0031 a0001c0001t0033g0030 a0001c0001t0039g0012 a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008 a0005c0006t0036g0032 a0007c0008t0034g0029	177	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(174): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp1 HG01891.hp2 HG01975.hp2 HG01981.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02129.hp1 HG02132.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp1 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18950.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18967.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19078.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19090.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.321+769A>T c.321+769A>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091239
chr11:60091259	A A	G G	2	a0001c0001t0003g0012 a0001c0001t0039g0012 a0001c0001t0003g0012 a0001c0001t0039g0012	4	HG02280.hp1 HG02630.hp2 HG02886.hp2 others(1): Show HG02280.hp1 HG02630.hp2 HG02886.hp2 HG02970.hp1	intron_variant	MODIFIER	c.321+789A>G c.321+789A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091259
chr11:60091455	C C	A A	1	a0002c0002t0004g0060 a0002c0002t0004g0060	1	NA19075.hp2 NA19075.hp2	intron_variant	MODIFIER	c.321+985C>A c.321+985C>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091455
chr11:60091483	T T	TTTCCAAA others(16): Show TTTCCAAAAGCTTCCCTGTGTATC	1	a0001c0001t0020g0044 a0001c0001t0020g0044	1	NA19091.hp2 NA19091.hp2	intron_variant	MODIFIER	c.321+1016_321+1038d others(25): Show c.321+1016_321+1038dupCCAAAAGCTTCCCTGTGTATCTT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr11	60091483
chr11:60091547	G G	A A	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	HG00438.hp2 HG00438.hp2	intron_variant	MODIFIER	c.321+1077G>A c.321+1077G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091547
chr11:60091550	C C	T T	1	a0001c0001t0002g0041 a0001c0001t0002g0041	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.321+1080C>T c.321+1080C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091550
chr11:60091583	T T	C C	2	a0001c0001t0002g0010 a0001c0001t0018g0010 a0001c0001t0002g0010 a0001c0001t0018g0010	7	NA18945.hp1 NA18955.hp1 NA18970.hp1 others(4): Show NA18945.hp1 NA18955.hp1 NA18970.hp1 NA18989.hp1 NA19002.hp2 NA19078.hp2 NA19085.hp2	intron_variant	MODIFIER	c.321+1113T>C c.321+1113T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091583
chr11:60091596	A A	C C	1	a0001c0001t0002g0040 a0001c0001t0002g0040	1	HG03669.hp2 HG03669.hp2	intron_variant	MODIFIER	c.321+1126A>C c.321+1126A>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091596
chr11:60091596	A A	G G	1	a0001c0001t0003g0024 a0001c0001t0003g0024	2	HG02922.hp1 NA20300.hp2 HG02922.hp1 NA20300.hp2	intron_variant	MODIFIER	c.321+1126A>G c.321+1126A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091596
chr11:60091614	T T	G G	2	a0001c0001t0016g0016 a0001c0001t0038g0046 a0001c0001t0016g0016 a0001c0001t0038g0046	4	HG02717.hp1 HG02896.hp2 HG02897.hp2 others(1): Show HG02717.hp1 HG02896.hp2 HG02897.hp2 NA19030.hp1	intron_variant	MODIFIER	c.321+1144T>G c.321+1144T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091614
chr11:60091851	A A	G G	1	a0001c0001t0003g0056 a0001c0001t0003g0056	1	HG01361.hp2 HG01361.hp2	intron_variant	MODIFIER	c.322-941A>G c.322-941A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091851
chr11:60091933	A A	C C	3	a0001c0001t0003g0023 a0001c0001t0007g0055 a0001c0001t0009g0023 a0001c0001t0003g0023 a0001c0001t0007g0055 a0001c0001t0009g0023	3	NA18984.hp2 NA18985.hp2 NA19091.hp1 NA18984.hp2 NA18985.hp2 NA19091.hp1	intron_variant	MODIFIER	c.322-859A>C c.322-859A>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60091933
chr11:60092012	T T	G G	1	a0001c0001t0024g0035 a0001c0001t0024g0035	1	HG00609.hp1 HG00609.hp1	intron_variant	MODIFIER	c.322-780T>G c.322-780T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092012
chr11:60092103	A A	G G	18	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(15): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002	78	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(75): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02602.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG03239.hp1 HG03239.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18945.hp1 NA18949.hp2 NA18955.hp1 NA18970.hp1 NA18979.hp2 NA18989.hp1 NA18991.hp1 NA18997.hp1 NA19002.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19078.hp2 NA19081.hp2 NA19085.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.322-689A>G c.322-689A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092103
chr11:60092136	C C	T T	18	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(15): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002	78	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(75): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02602.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG03239.hp1 HG03239.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18945.hp1 NA18949.hp2 NA18955.hp1 NA18970.hp1 NA18979.hp2 NA18989.hp1 NA18991.hp1 NA18997.hp1 NA19002.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19078.hp2 NA19081.hp2 NA19085.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.322-656C>T c.322-656C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092136
chr11:60092138	C C	T T	17	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(14): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	51	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(48): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02970.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.322-654C>T c.322-654C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092138
chr11:60092182	G G	A A	3	a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0045g0015 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0045g0015	6	HG01243.hp2 HG02622.hp1 HG02818.hp1 others(3): Show HG01243.hp2 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG03098.hp1	intron_variant	MODIFIER	c.322-610G>A c.322-610G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092182
chr11:60092238	C C	T T	1	a0001c0001t0033g0030 a0001c0001t0033g0030	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.322-554C>T c.322-554C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092238
chr11:60092296	C C	CTT CTT	22	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(19): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	60	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(57): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01243.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.322-480_322-479dup others(2): Show c.322-480_322-479dupTT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr11	60092296
chr11:60092296	CT CT	C C	12	a0001c0001t0001g0011 a0001c0001t0001g0047 a0001c0001t0002g0036 others(9): Show a0001c0001t0001g0011 a0001c0001t0001g0047 a0001c0001t0002g0036 a0001c0001t0003g0012 a0001c0001t0003g0017 a0001c0001t0007g0055 a0001c0001t0015g0011 a0001c0001t0031g0031 a0001c0001t0033g0030 a0001c0001t0039g0012 a0005c0006t0036g0032 a0007c0008t0034g0029	19	HG01167.hp1 HG01169.hp2 HG01261.hp1 others(16): Show HG01167.hp1 HG01169.hp2 HG01261.hp1 HG01891.hp1 HG01928.hp2 HG02145.hp2 HG02280.hp1 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02886.hp2 HG02970.hp1 HG03225.hp2 HG03453.hp1 NA18941.hp1 NA18962.hp2 NA18979.hp2 NA18984.hp2 NA18985.hp1	intron_variant	MODIFIER	c.322-479delT c.322-479delT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr11	60092296
chr11:60092335	G G	A A	2	a0001c0001t0021g0021 a0001c0001t0041g0021 a0001c0001t0021g0021 a0001c0001t0041g0021	2	HG00323.hp2 HG01884.hp1 HG00323.hp2 HG01884.hp1	intron_variant	MODIFIER	c.322-457G>A c.322-457G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092335
chr11:60092452	T T	A A	1	a0001c0001t0010g0019 a0001c0001t0010g0019	2	HG01069.hp1 HG01071.hp1 HG01069.hp1 HG01071.hp1	intron_variant	MODIFIER	c.322-340T>A c.322-340T>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092452
chr11:60092531	G G	A A	1	a0001c0001t0002g0037 a0001c0001t0002g0037	1	HG04228.hp1 HG04228.hp1	intron_variant	MODIFIER	c.322-261G>A c.322-261G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092531
chr11:60092547	C C	T T	17	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(14): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	51	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(48): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02970.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.322-245C>T c.322-245C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092547
chr11:60092550	C C	T T	24	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(21): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	62	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(59): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01243.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.322-242C>T c.322-242C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092550
chr11:60092582	C C	T T	24	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(21): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	62	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(59): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01243.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.322-210C>T c.322-210C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092582
chr11:60092705	G G	T T	46	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(43): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0006g0042 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	165	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(162): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp2 HG01975.hp2 HG01981.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02129.hp1 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp1 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18950.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18967.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19078.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19090.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.322-87G>T c.322-87G>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	3/6		chr11	60092705
chr11:60092873	T T	G G	1	a0001c0001t0031g0031 a0001c0001t0031g0031	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.378+25T>G c.378+25T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	4/6		chr11	60092873
chr11:60092885	A A	G G	1	a0001c0001t0002g0020 a0001c0001t0002g0020	2	HG01346.hp2 HG01358.hp1 HG01346.hp2 HG01358.hp1	intron_variant	MODIFIER	c.378+37A>G c.378+37A>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	4/6		chr11	60092885
chr11:60093105	A A	T T	7	a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 others(4): Show a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0035g0061 a0002c0002t0045g0015	11	HG01243.hp2 HG02055.hp1 HG02258.hp1 others(8): Show HG01243.hp2 HG02055.hp1 HG02258.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG03098.hp1 HG03098.hp2 NA18906.hp1 NA19030.hp2	intron_variant	MODIFIER	c.378+257A>T c.378+257A>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	4/6		chr11	60093105
chr11:60093189	G G	A A	2	a0001c0001t0006g0005 a0001c0001t0024g0035 a0001c0001t0006g0005 a0001c0001t0024g0035	20	HG00408.hp1 HG00609.hp1 HG00673.hp2 others(17): Show HG00408.hp1 HG00609.hp1 HG00673.hp2 HG02129.hp1 NA18944.hp1 NA18954.hp2 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18981.hp2 NA18986.hp2 NA18990.hp2 NA18998.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19075.hp1 NA19080.hp1 NA19083.hp1 NA19090.hp1	intron_variant	MODIFIER	c.379-211G>A c.379-211G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	4/6		chr11	60093189
chr11:60093238	T T	C C	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	NA18962.hp2 NA18962.hp2	intron_variant	MODIFIER	c.379-162T>C c.379-162T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	4/6		chr11	60093238
chr11:60093271	T T	C C	1	a0002c0002t0004g0065 a0002c0002t0004g0065	1	NA18941.hp2 NA18941.hp2	intron_variant	MODIFIER	c.379-129T>C c.379-129T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	4/6		chr11	60093271
chr11:60093312	G G	A A	1	a0001c0001t0005g0048 a0001c0001t0005g0048	1	HG01943.hp2 HG01943.hp2	intron_variant	MODIFIER	c.379-88G>A c.379-88G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	4/6		chr11	60093312
chr11:60093802	T T	TTG TTG	19	a0001c0001t0001g0004 a0001c0001t0001g0034 a0001c0001t0003g0003 others(16): Show a0001c0001t0001g0004 a0001c0001t0001g0034 a0001c0001t0003g0003 a0001c0001t0003g0012 a0001c0001t0003g0023 a0001c0001t0003g0052 a0001c0001t0003g0056 a0001c0001t0005g0004 a0001c0001t0005g0058 a0001c0001t0007g0003 a0001c0001t0007g0004 a0001c0001t0007g0055 a0001c0001t0008g0004 a0001c0001t0009g0023 a0001c0001t0017g0004 a0001c0001t0039g0012 a0001c0001t0042g0003 a0001c0001t0046g0004 a0007c0008t0034g0029	62	HG00140.hp2 HG00423.hp2 HG00438.hp1 others(59): Show HG00140.hp2 HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG01099.hp1 HG01255.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01361.hp2 HG01517.hp1 HG02004.hp2 HG02055.hp2 HG02056.hp2 HG02135.hp1 HG02135.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02630.hp2 HG02647.hp2 HG02886.hp2 HG02970.hp1 HG03017.hp1 HG03041.hp2 HG03491.hp1 HG03654.hp2 HG03704.hp1 HG03834.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 NA18944.hp2 NA18948.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18962.hp1 NA18967.hp1 NA18968.hp1 NA18969.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18991.hp2 NA18995.hp1 NA19003.hp2 NA19059.hp1 NA19060.hp1 NA19062.hp1 NA19072.hp1 NA19091.hp1 NA20905.hp1	intron_variant	MODIFIER	c.538-128_538-127dup others(2): Show c.538-128_538-127dupGT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr11	60093802
chr11:60093802	T T	TTGTG TTGTG	5	a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0033g0030 others(2): Show a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0033g0030 a0001c0001t0038g0046 a0002c0002t0007g0025	6	HG01891.hp1 HG02602.hp2 HG02818.hp1 others(3): Show HG01891.hp1 HG02602.hp2 HG02818.hp1 HG02965.hp1 NA19030.hp1 NA20805.hp1	intron_variant	MODIFIER	c.538-130_538-127dup others(4): Show c.538-130_538-127dupGTGT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr11	60093802
chr11:60093802	T T	TTGTGTGT others(1): Show TTGTGTGTG	5	a0001c0001t0003g0017 a0002c0002t0004g0009 a0002c0002t0013g0026 others(2): Show a0001c0001t0003g0017 a0002c0002t0004g0009 a0002c0002t0013g0026 a0002c0002t0048g0009 a0005c0006t0036g0032	16	HG00544.hp2 HG00621.hp1 HG01261.hp1 others(13): Show HG00544.hp2 HG00621.hp1 HG01261.hp1 HG02055.hp1 HG03098.hp2 HG03225.hp2 HG03453.hp1 NA18942.hp1 NA18970.hp2 NA18971.hp2 NA18989.hp2 NA18995.hp2 NA19058.hp1 NA19080.hp2 NA19082.hp2 NA19083.hp2	intron_variant	MODIFIER	c.538-134_538-127dup others(8): Show c.538-134_538-127dupGTGTGTGT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr11	60093802
chr11:60093802	T T	TTGTGTGT others(3): Show TTGTGTGTGTG	5	a0002c0002t0004g0008 a0002c0002t0004g0067 a0002c0002t0013g0062 others(2): Show a0002c0002t0004g0008 a0002c0002t0004g0067 a0002c0002t0013g0062 a0002c0002t0014g0064 a0004c0003t0004g0008	15	HG01070.hp2 HG01891.hp2 HG02451.hp1 others(12): Show HG01070.hp2 HG01891.hp2 HG02451.hp1 HG02486.hp1 HG02970.hp2 HG03195.hp1 NA18950.hp1 NA18967.hp2 NA18978.hp2 NA18997.hp2 NA19011.hp2 NA19030.hp2 NA19060.hp2 NA19064.hp1 NA19079.hp2	intron_variant	MODIFIER	c.538-136_538-127dup others(10): Show c.538-136_538-127dupGTGTGTGTGT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr11	60093802
chr11:60093802	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	10	a0002c0002t0004g0006 a0002c0002t0004g0027 a0002c0002t0004g0060 others(7): Show a0002c0002t0004g0006 a0002c0002t0004g0027 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0047g0006 a0002c0002t0049g0006 a0004c0003t0004g0006	24	HG00558.hp2 HG00621.hp2 HG02015.hp2 others(21): Show HG00558.hp2 HG00621.hp2 HG02015.hp2 HG02040.hp2 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02280.hp2 HG02523.hp1 HG03139.hp2 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18979.hp1 NA18981.hp1 NA18988.hp2 NA18992.hp1 NA18994.hp2 NA19059.hp2 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA20300.hp1	intron_variant	MODIFIER	c.538-138_538-127dup others(12): Show c.538-138_538-127dupGTGTGTGTGTGT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr11	60093802
chr11:60093802	T T	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	1	a0002c0002t0004g0028 a0002c0002t0004g0028	2	HG00597.hp1 HG00597.hp2 HG00597.hp1 HG00597.hp2	intron_variant	MODIFIER	c.538-140_538-127dup others(14): Show c.538-140_538-127dupGTGTGTGTGTGTGT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr11	60093802
chr11:60093802	TTG TTG	T T	7	a0001c0001t0002g0039 a0001c0001t0003g0049 a0001c0001t0006g0042 others(4): Show a0001c0001t0002g0039 a0001c0001t0003g0049 a0001c0001t0006g0042 a0001c0001t0009g0007 a0003c0004t0003g0007 a0003c0004t0007g0007 a0003c0005t0003g0007	15	HG01884.hp2 HG02257.hp1 HG02451.hp2 others(12): Show HG01884.hp2 HG02257.hp1 HG02451.hp2 HG02486.hp2 HG02622.hp2 HG02647.hp1 HG02809.hp2 HG02965.hp2 HG02976.hp2 HG03516.hp2 NA18997.hp1 NA19003.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1	intron_variant	MODIFIER	c.538-128_538-127del others(2): Show c.538-128_538-127delGT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr11	60093802
chr11:60093802	TTGTG TTGTG	T T	22	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(19): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018	103	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(100): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02129.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02572.hp2 HG02602.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02896.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19075.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.538-130_538-127del others(4): Show c.538-130_538-127delGTGT	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr11	60093802
chr11:60094341	G G	A A	24	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(21): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0006g0042 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018	105	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(102): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02129.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02572.hp2 HG02602.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02896.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19075.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.636+279G>A c.636+279G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60094341
chr11:60094495	GACT GACT	G G	3	a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063	4	HG02055.hp1 HG03098.hp2 NA18906.hp1 others(1): Show HG02055.hp1 HG03098.hp2 NA18906.hp1 NA19030.hp2	intron_variant	MODIFIER	c.636+436_636+438del others(3): Show c.636+436_636+438delTAC	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6	INFO_REALIGN_3_PRIME	chr11	60094495
chr11:60094510	C C	T T	24	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(21): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0006g0042 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018	105	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(102): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02129.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02572.hp2 HG02602.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02896.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19075.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.636+448C>T c.636+448C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60094510
chr11:60094676	C C	T T	1	a0001c0001t0003g0054 a0001c0001t0003g0054	1	HG02602.hp2 HG02602.hp2	intron_variant	MODIFIER	c.636+614C>T c.636+614C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60094676
chr11:60094686	C C	T T	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	NA19068.hp1 NA19068.hp1	intron_variant	MODIFIER	c.636+624C>T c.636+624C>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60094686
chr11:60094788	A A	T T	24	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 others(21): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0020 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0068 a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0006g0042 a0001c0001t0010g0002 a0001c0001t0010g0019 a0001c0001t0018g0002 a0001c0001t0018g0010 a0001c0001t0022g0002 a0001c0001t0024g0035 a0001c0001t0025g0002 a0001c0001t0026g0002 a0001c0001t0027g0002 a0001c0001t0028g0018 a0001c0001t0029g0018	105	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(102): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01975.hp2 HG01981.hp1 HG02040.hp1 HG02129.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp2 HG02572.hp2 HG02602.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02896.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18979.hp2 NA18981.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19075.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.636+726A>T c.636+726A>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60094788
chr11:60094876	G G	A A	1	a0001c0001t0012g0014 a0001c0001t0012g0014	4	HG01243.hp1 HG02809.hp1 HG03130.hp1 others(1): Show HG01243.hp1 HG02809.hp1 HG03130.hp1 HG03540.hp2	intron_variant	MODIFIER	c.637-682G>A c.637-682G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60094876
chr11:60095072	G G	A A	1	a0001c0001t0006g0042 a0001c0001t0006g0042	1	HG02647.hp1 HG02647.hp1	intron_variant	MODIFIER	c.637-486G>A c.637-486G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095072
chr11:60095091	G G	A A	5	a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0024g0035 others(2): Show a0001c0001t0006g0005 a0001c0001t0006g0013 a0001c0001t0024g0035 a0001c0001t0028g0018 a0001c0001t0029g0018	26	HG00408.hp1 HG00609.hp1 HG00673.hp2 others(23): Show HG00408.hp1 HG00609.hp1 HG00673.hp2 HG02129.hp1 HG02572.hp2 HG02896.hp1 HG03209.hp1 HG03453.hp2 HG03669.hp1 HG03831.hp1 NA18944.hp1 NA18954.hp2 NA18957.hp2 NA18966.hp2 NA18969.hp2 NA18981.hp2 NA18986.hp2 NA18990.hp2 NA18998.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19075.hp1 NA19080.hp1 NA19083.hp1 NA19090.hp1	intron_variant	MODIFIER	c.637-467G>A c.637-467G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095091
chr11:60095104	A A	T T	1	a0001c0001t0003g0052 a0001c0001t0003g0052	1	HG04204.hp1 HG04204.hp1	intron_variant	MODIFIER	c.637-454A>T c.637-454A>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095104
chr11:60095144	T T	G G	1	a0002c0002t0004g0067 a0002c0002t0004g0067	1	NA19060.hp2 NA19060.hp2	intron_variant	MODIFIER	c.637-414T>G c.637-414T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095144
chr11:60095148	G G	A A	1	a0001c0001t0002g0038 a0001c0001t0002g0038	1	HG00738.hp2 HG00738.hp2	intron_variant	MODIFIER	c.637-410G>A c.637-410G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095148
chr11:60095240	G G	A A	1	a0001c0001t0003g0022 a0001c0001t0003g0022	2	NA19043.hp1 NA19043.hp2 NA19043.hp1 NA19043.hp2	intron_variant	MODIFIER	c.637-318G>A c.637-318G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095240
chr11:60095246	T T	C C	24	a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 others(21): Show a0002c0002t0004g0006 a0002c0002t0004g0008 a0002c0002t0004g0009 a0002c0002t0004g0027 a0002c0002t0004g0028 a0002c0002t0004g0060 a0002c0002t0004g0065 a0002c0002t0004g0066 a0002c0002t0004g0067 a0002c0002t0007g0015 a0002c0002t0007g0025 a0002c0002t0013g0026 a0002c0002t0013g0062 a0002c0002t0013g0063 a0002c0002t0014g0006 a0002c0002t0014g0059 a0002c0002t0014g0064 a0002c0002t0035g0061 a0002c0002t0045g0015 a0002c0002t0047g0006 a0002c0002t0048g0009 a0002c0002t0049g0006 a0004c0003t0004g0006 a0004c0003t0004g0008	62	HG00544.hp2 HG00558.hp2 HG00597.hp1 others(59): Show HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG01070.hp2 HG01243.hp2 HG01891.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18950.hp1 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA19011.hp2 NA19030.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19064.hp1 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA20300.hp1	intron_variant	MODIFIER	c.637-312T>C c.637-312T>C	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095246
chr11:60095246	T T	G G	14	a0001c0001t0003g0003 a0001c0001t0003g0022 a0001c0001t0003g0023 others(11): Show a0001c0001t0003g0003 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0056 a0001c0001t0007g0003 a0001c0001t0007g0055 a0001c0001t0009g0023 a0001c0001t0042g0003	41	HG00140.hp2 HG00423.hp2 HG00544.hp1 others(38): Show HG00140.hp2 HG00423.hp2 HG00544.hp1 HG01256.hp2 HG01258.hp1 HG01361.hp2 HG01517.hp1 HG02055.hp2 HG02056.hp2 HG02165.hp2 HG02602.hp2 HG02922.hp1 HG03017.hp1 HG03834.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 NA18944.hp2 NA18948.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18962.hp1 NA18968.hp1 NA18969.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp2 NA18995.hp1 NA19003.hp1 NA19043.hp1 NA19043.hp2 NA19059.hp1 NA19062.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.637-312T>G c.637-312T>G	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095246
chr11:60095286	A A	T T	1	a0001c0001t0016g0016 a0001c0001t0016g0016	3	HG02717.hp1 HG02896.hp2 HG02897.hp2 HG02717.hp1 HG02896.hp2 HG02897.hp2	intron_variant	MODIFIER	c.637-272A>T c.637-272A>T	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095286
chr11:60095414	G G	A A	1	a0002c0002t0004g0027 a0002c0002t0004g0027	2	HG00558.hp2 HG02132.hp1 HG00558.hp2 HG02132.hp1	intron_variant	MODIFIER	c.637-144G>A c.637-144G>A	MS4A2	ENSG00000149534.9	transcript	ENST00000278888.8	protein_coding	6/6		chr11	60095414

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🧬 JoGo Online Haplotype Explorer MS4A2_chr11_60083664_60103467

JoGo Local Haplotype Explorer (on iGV) MS4A2_chr11_60083664_60103467

🧬 Gene Summary

Translation Multiple Alignment View

LD View

AAmino acid (protein) Level Haplotype Info (Total: 7)

CCoding Level Haplotype Info (Total: 8)

TTranscript Level Haplotype Info (Total: 49)

GGenebody Level Haplotype Info (Total: 68)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 8)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 55)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 112)

Haplotype Details by Sample (Haploid Level) (Total: 418)

AAmino acid (protein) Level Variants (Effect to Protein Coding Variants) (Total: 6)

CCoding Level Variants (Synonymous Mutations) (Total: 2)

TTranscript Level Variants (5'UTR+3'UTR) (Total: 46)

GGenebody Level Haplotype Variants (Intron) (Total: 75)

Genealogies

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Annotation (Repeats)

Annotation (SNP Array)