Search by Gene
| geneid | 4485 |
|---|---|
| ensemblid | ENSG00000173531.16 |
| hgncid | 7380 |
| symbol | MST1 |
| name | macrophage stimulating 1 |
| refseq_nuc | NM_020998.4 |
| refseq_prot | NP_066278.3 |
| ensembl_nuc | ENST00000449682.3 |
| ensembl_prot | ENSP00000414287.2 |
| mane_status | MANE Select |
| chr | chr3 |
| start | 49683947 |
| end | 49689474 |
| strand | - |
| ver | v1.2 |
| region | chr3:49683947-49689474 |
| region5000 | chr3:49678947-49694474 |
| regionname0 | MST1_chr3_49683947_49689474 |
| regionname5000 | MST1_chr3_49678947_49694474 |
Multiple Alignments (by translate haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
Multiple Alignments (by aa haplotype frequency)
| ahapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
alen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aa |
|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 725 | 235 | 72 | 44 | 80 | 10 | 27 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0002 | 0/0 | 725 | 62 | 18 | 14 | 15 | 7 | 8 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0003 | 0/0 | 725 | 11 | 0 | 8 | 3 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0004 | 0/0 | 725 | 3 | 3 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0005 | 0/0 | 725 | 2 | 0 | 0 | 2 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0006 | 0/0 | 725 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0007 | 0/0 | 725 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0008 | 0/0 | 725 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0009 | 0/0 | 725 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0010 | 0/0 | 725 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0011 | 0/0 | 725 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq |
|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 0/1 | 2178 | 167 | 32 | 36 | 69 | 6 | 23 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0002 | 0/0 | 2178 | 62 | 18 | 14 | 15 | 7 | 8 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0003 | 1/0 | 2178 | 37 | 23 | 8 | 1 | 3 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0004 | 0/0 | 2178 | 14 | 13 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0005 | 0/0 | 2178 | 11 | 0 | 8 | 3 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0006 | 0/0 | 2178 | 9 | 0 | 0 | 8 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0007 | 0/0 | 2178 | 4 | 2 | 0 | 0 | 1 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0008 | 0/0 | 2178 | 3 | 3 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0009 | 0/0 | 2178 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0010 | 0/0 | 2178 | 2 | 0 | 0 | 2 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0011 | 0/0 | 2178 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0012 | 0/0 | 2178 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0013 | 0/0 | 2178 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0014 | 0/0 | 2178 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0015 | 0/0 | 2178 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0016 | 0/0 | 2178 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0017 | 0/0 | 2178 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0018 | 0/0 | 2178 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| c0019 | 0/0 | 2178 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| thapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq |
|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 0/1 | 865 | 298 | 89 | 65 | 100 | 13 | 30 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| t0002 | 0/0 | 865 | 12 | 1 | 1 | 1 | 5 | 4 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| t0003 | 0/0 | 865 | 3 | 3 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| t0004 | 1/0 | 865 | 3 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| t0005 | 0/0 | 865 | 2 | 0 | 0 | 0 | 0 | 2 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| t0006 | 0/0 | 865 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| t0007 | 0/0 | 865 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename |
|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/0 | 81 | 11 | 19 | 41 | 2 | 8 | MST1_chr3_49678947_49694474 | MST1 |
| g0002 | 0/0 | 49 | 5 | 12 | 23 | 2 | 7 | MST1_chr3_49678947_49694474 | MST1 |
| g0003 | 0/0 | 23 | 6 | 5 | 8 | 2 | 2 | MST1_chr3_49678947_49694474 | MST1 |
| g0004 | 0/0 | 12 | 5 | 4 | 2 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0005 | 0/0 | 11 | 9 | 2 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0006 | 0/0 | 10 | 4 | 3 | 1 | 1 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0007 | 0/0 | 8 | 2 | 0 | 1 | 1 | 4 | MST1_chr3_49678947_49694474 | MST1 |
| g0008 | 0/1 | 7 | 1 | 3 | 1 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0009 | 0/0 | 6 | 6 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0010 | 0/0 | 6 | 1 | 3 | 0 | 2 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0011 | 0/0 | 6 | 0 | 0 | 6 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0012 | 0/0 | 5 | 1 | 3 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0013 | 0/0 | 5 | 0 | 4 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0014 | 0/0 | 5 | 0 | 4 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0015 | 0/0 | 5 | 4 | 1 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0016 | 0/0 | 5 | 1 | 0 | 0 | 1 | 3 | MST1_chr3_49678947_49694474 | MST1 |
| g0017 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0018 | 0/0 | 4 | 2 | 0 | 2 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0019 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0020 | 0/0 | 4 | 0 | 1 | 1 | 2 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0021 | 0/0 | 3 | 0 | 0 | 2 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0022 | 0/0 | 3 | 2 | 1 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0023 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0024 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | MST1_chr3_49678947_49694474 | MST1 |
| g0025 | 0/0 | 2 | 1 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0026 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0027 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0028 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0029 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0030 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0031 | 1/0 | 2 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0033 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0034 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0035 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0037 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0038 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0039 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0040 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0041 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0042 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0043 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0044 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0047 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0048 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0049 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0050 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0053 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0055 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0056 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0057 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0058 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0060 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0061 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0062 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0063 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| g0064 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0065 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0066 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| g0067 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| achapid | ahapid | chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | acseq |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | a0001 | c0001 | 0/1 | 167 | 32 | 36 | 69 | 6 | 23 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0003 | a0001 | c0003 | 1/0 | 37 | 23 | 8 | 1 | 3 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0004 | a0001 | c0004 | 0/0 | 14 | 13 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0006 | a0001 | c0006 | 0/0 | 9 | 0 | 0 | 8 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0007 | a0001 | c0007 | 0/0 | 4 | 2 | 0 | 0 | 1 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0013 | a0001 | c0013 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0014 | a0001 | c0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0015 | a0001 | c0015 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0016 | a0001 | c0016 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0002c0002 | a0002 | c0002 | 0/0 | 62 | 18 | 14 | 15 | 7 | 8 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0003c0005 | a0003 | c0005 | 0/0 | 11 | 0 | 8 | 3 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0004c0008 | a0004 | c0008 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0005c0010 | a0005 | c0010 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0006c0009 | a0006 | c0009 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0007c0011 | a0007 | c0011 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0008c0018 | a0008 | c0018 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0009c0017 | a0009 | c0017 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0010c0019 | a0010 | c0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0011c0012 | a0011 | c0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| acthapid | ahapid | chapid | thapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | actseq |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | a0001 | c0001 | t0001 | 0/1 | 164 | 32 | 36 | 68 | 6 | 21 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0001t0005 | a0001 | c0001 | t0005 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0001t0006 | a0001 | c0001 | t0006 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0003t0001 | a0001 | c0003 | t0001 | 0/0 | 34 | 21 | 8 | 1 | 3 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0003t0004 | a0001 | c0003 | t0004 | 1/0 | 3 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0004t0001 | a0001 | c0004 | t0001 | 0/0 | 13 | 12 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0004t0007 | a0001 | c0004 | t0007 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0006t0001 | a0001 | c0006 | t0001 | 0/0 | 9 | 0 | 0 | 8 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0007t0001 | a0001 | c0007 | t0001 | 0/0 | 3 | 2 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0007t0002 | a0001 | c0007 | t0002 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0013t0001 | a0001 | c0013 | t0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0014t0001 | a0001 | c0014 | t0001 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0015t0001 | a0001 | c0015 | t0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0001c0016t0001 | a0001 | c0016 | t0001 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0002c0002t0001 | a0002 | c0002 | t0001 | 0/0 | 51 | 17 | 13 | 14 | 3 | 4 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0002c0002t0002 | a0002 | c0002 | t0002 | 0/0 | 11 | 1 | 1 | 1 | 4 | 4 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0003c0005t0001 | a0003 | c0005 | t0001 | 0/0 | 11 | 0 | 8 | 3 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0004c0008t0003 | a0004 | c0008 | t0003 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0005c0010t0001 | a0005 | c0010 | t0001 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0006c0009t0001 | a0006 | c0009 | t0001 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0007c0011t0001 | a0007 | c0011 | t0001 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0008c0018t0001 | a0008 | c0018 | t0001 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0009c0017t0001 | a0009 | c0017 | t0001 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0010c0019t0001 | a0010 | c0019 | t0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| a0011c0012t0001 | a0011 | c0012 | t0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 | copy fasta |
| actghapid | ahapid | chapid | thapid | ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
total | AFR | AMR | EAS | EUR | SAS | regionname | genename |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | a0001 | c0001 | t0001 | g0001 | 0/0 | 81 | 11 | 19 | 41 | 2 | 8 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0002 | a0001 | c0001 | t0001 | g0002 | 0/0 | 49 | 5 | 12 | 23 | 2 | 7 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0007 | a0001 | c0001 | t0001 | g0007 | 0/0 | 8 | 2 | 0 | 1 | 1 | 4 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0008 | a0001 | c0001 | t0001 | g0008 | 0/1 | 7 | 1 | 3 | 1 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0015 | a0001 | c0001 | t0001 | g0015 | 0/0 | 5 | 4 | 1 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0019 | a0001 | c0001 | t0001 | g0019 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0022 | a0001 | c0001 | t0001 | g0022 | 0/0 | 3 | 2 | 1 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0046 | a0001 | c0001 | t0001 | g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0053 | a0001 | c0001 | t0001 | g0053 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0054 | a0001 | c0001 | t0001 | g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0055 | a0001 | c0001 | t0001 | g0055 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0059 | a0001 | c0001 | t0001 | g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0060 | a0001 | c0001 | t0001 | g0060 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0001g0061 | a0001 | c0001 | t0001 | g0061 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0005g0024 | a0001 | c0001 | t0005 | g0024 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0001t0006g0032 | a0001 | c0001 | t0006 | g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0005 | a0001 | c0003 | t0001 | g0005 | 0/0 | 11 | 9 | 2 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0009 | a0001 | c0003 | t0001 | g0009 | 0/0 | 6 | 6 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0010 | a0001 | c0003 | t0001 | g0010 | 0/0 | 6 | 1 | 3 | 0 | 2 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0012 | a0001 | c0003 | t0001 | g0012 | 0/0 | 5 | 1 | 3 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0025 | a0001 | c0003 | t0001 | g0025 | 0/0 | 2 | 1 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0035 | a0001 | c0003 | t0001 | g0035 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0056 | a0001 | c0003 | t0001 | g0056 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0057 | a0001 | c0003 | t0001 | g0057 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0001g0062 | a0001 | c0003 | t0001 | g0062 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0004g0031 | a0001 | c0003 | t0004 | g0031 | 1/0 | 2 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0003t0004g0067 | a0001 | c0003 | t0004 | g0067 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0004t0001g0017 | a0001 | c0004 | t0001 | g0017 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0004t0001g0027 | a0001 | c0004 | t0001 | g0027 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0004t0001g0028 | a0001 | c0004 | t0001 | g0028 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0004t0001g0029 | a0001 | c0004 | t0001 | g0029 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0004t0001g0042 | a0001 | c0004 | t0001 | g0042 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0004t0001g0043 | a0001 | c0004 | t0001 | g0043 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0004t0001g0044 | a0001 | c0004 | t0001 | g0044 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0004t0007g0066 | a0001 | c0004 | t0007 | g0066 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0006t0001g0011 | a0001 | c0006 | t0001 | g0011 | 0/0 | 6 | 0 | 0 | 6 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0006t0001g0021 | a0001 | c0006 | t0001 | g0021 | 0/0 | 3 | 0 | 0 | 2 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0007t0001g0037 | a0001 | c0007 | t0001 | g0037 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0007t0001g0038 | a0001 | c0007 | t0001 | g0038 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0007t0001g0040 | a0001 | c0007 | t0001 | g0040 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0007t0002g0064 | a0001 | c0007 | t0002 | g0064 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0013t0001g0052 | a0001 | c0013 | t0001 | g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0014t0001g0058 | a0001 | c0014 | t0001 | g0058 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0015t0001g0047 | a0001 | c0015 | t0001 | g0047 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0001c0016t0001g0048 | a0001 | c0016 | t0001 | g0048 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0001g0003 | a0002 | c0002 | t0001 | g0003 | 0/0 | 23 | 6 | 5 | 8 | 2 | 2 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0001g0004 | a0002 | c0002 | t0001 | g0004 | 0/0 | 12 | 5 | 4 | 2 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0001g0006 | a0002 | c0002 | t0001 | g0006 | 0/0 | 10 | 4 | 3 | 1 | 1 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0001g0018 | a0002 | c0002 | t0001 | g0018 | 0/0 | 4 | 2 | 0 | 2 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0001g0039 | a0002 | c0002 | t0001 | g0039 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0001g0041 | a0002 | c0002 | t0001 | g0041 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0002g0016 | a0002 | c0002 | t0002 | g0016 | 0/0 | 5 | 1 | 0 | 0 | 1 | 3 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0002g0020 | a0002 | c0002 | t0002 | g0020 | 0/0 | 4 | 0 | 1 | 1 | 2 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0002g0063 | a0002 | c0002 | t0002 | g0063 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0002c0002t0002g0065 | a0002 | c0002 | t0002 | g0065 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0003c0005t0001g0013 | a0003 | c0005 | t0001 | g0013 | 0/0 | 5 | 0 | 4 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0003c0005t0001g0014 | a0003 | c0005 | t0001 | g0014 | 0/0 | 5 | 0 | 4 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0003c0005t0001g0036 | a0003 | c0005 | t0001 | g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0004c0008t0003g0023 | a0004 | c0008 | t0003 | g0023 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0004c0008t0003g0033 | a0004 | c0008 | t0003 | g0033 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0005c0010t0001g0030 | a0005 | c0010 | t0001 | g0030 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0006c0009t0001g0026 | a0006 | c0009 | t0001 | g0026 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0007c0011t0001g0034 | a0007 | c0011 | t0001 | g0034 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0008c0018t0001g0050 | a0008 | c0018 | t0001 | g0050 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0009c0017t0001g0049 | a0009 | c0017 | t0001 | g0049 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MST1_chr3_49678947_49694474 | MST1 |
| a0010c0019t0001g0051 | a0010 | c0019 | t0001 | g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| a0011c0012t0001g0045 | a0011 | c0012 | t0001 | g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MST1_chr3_49678947_49694474 | MST1 |
| sampleid | haplotypeid | ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename |
|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0007 | EUR | GBR | MST1_chr3_49678947_49694474 | MST1 |
| HG00099 | hp2 | a0002 | c0002 | t0002 | g0065 | EUR | GBR | MST1_chr3_49678947_49694474 | MST1 |
| HG00140 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | MST1_chr3_49678947_49694474 | MST1 |
| HG00140 | hp2 | a0002 | c0002 | t0002 | g0020 | EUR | GBR | MST1_chr3_49678947_49694474 | MST1 |
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0008 | EUR | FIN | MST1_chr3_49678947_49694474 | MST1 |
| HG00280 | hp2 | a0001 | c0007 | t0002 | g0064 | EUR | FIN | MST1_chr3_49678947_49694474 | MST1 |
| HG00323 | hp1 | a0002 | c0002 | t0001 | g0006 | EUR | FIN | MST1_chr3_49678947_49694474 | MST1 |
| HG00323 | hp2 | a0008 | c0018 | t0001 | g0050 | EUR | FIN | MST1_chr3_49678947_49694474 | MST1 |
| HG00408 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | MST1_chr3_49678947_49694474 | MST1 |
| HG00408 | hp2 | a0001 | c0001 | t0001 | g0054 | EAS | CHS | MST1_chr3_49678947_49694474 | MST1 |
| HG00423 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | MST1_chr3_49678947_49694474 | MST1 |
| HG00423 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | MST1_chr3_49678947_49694474 | MST1 |
| HG00544 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MST1_chr3_49678947_49694474 | MST1 |
| HG00544 | hp2 | a0002 | c0002 | t0001 | g0003 | EAS | CHS | MST1_chr3_49678947_49694474 | MST1 |
| HG00609 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | MST1_chr3_49678947_49694474 | MST1 |
| HG00609 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | MST1_chr3_49678947_49694474 | MST1 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG00639 | hp2 | a0002 | c0002 | t0001 | g0003 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG00733 | hp1 | a0002 | c0002 | t0001 | g0004 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG00733 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG00735 | hp1 | a0002 | c0002 | t0001 | g0004 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG00735 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG00738 | hp1 | a0003 | c0005 | t0001 | g0014 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG00738 | hp2 | a0002 | c0002 | t0001 | g0039 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01069 | hp1 | a0001 | c0003 | t0001 | g0010 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01069 | hp2 | a0002 | c0002 | t0001 | g0006 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01070 | hp1 | a0001 | c0003 | t0001 | g0010 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01070 | hp2 | a0002 | c0002 | t0001 | g0003 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01071 | hp1 | a0002 | c0002 | t0001 | g0003 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01071 | hp2 | a0002 | c0002 | t0001 | g0006 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01074 | hp2 | a0001 | c0003 | t0001 | g0005 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01081 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01081 | hp2 | a0003 | c0005 | t0001 | g0014 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01099 | hp1 | a0003 | c0005 | t0001 | g0014 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01099 | hp2 | a0002 | c0002 | t0001 | g0003 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01106 | hp1 | a0002 | c0002 | t0002 | g0020 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01106 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0015 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01109 | hp2 | a0002 | c0002 | t0001 | g0003 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01167 | hp2 | a0002 | c0002 | t0001 | g0004 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01168 | hp1 | a0003 | c0005 | t0001 | g0014 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01168 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01169 | hp1 | a0002 | c0002 | t0001 | g0004 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01169 | hp2 | a0003 | c0005 | t0001 | g0013 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01175 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01175 | hp2 | a0001 | c0003 | t0001 | g0012 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01192 | hp1 | a0001 | c0003 | t0001 | g0012 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01192 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01243 | hp1 | a0001 | c0003 | t0001 | g0005 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01243 | hp2 | a0001 | c0001 | t0001 | g0022 | AMR | PUR | MST1_chr3_49678947_49694474 | MST1 |
| HG01257 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01257 | hp2 | a0003 | c0005 | t0001 | g0013 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0008 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01258 | hp2 | a0003 | c0005 | t0001 | g0013 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01346 | hp1 | a0001 | c0001 | t0001 | g0008 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01346 | hp2 | a0001 | c0001 | t0001 | g0008 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01358 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01433 | hp2 | a0003 | c0005 | t0001 | g0013 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01496 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01496 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01515 | hp1 | a0002 | c0002 | t0001 | g0003 | EUR | IBS | MST1_chr3_49678947_49694474 | MST1 |
| HG01515 | hp2 | a0001 | c0001 | t0001 | g0002 | EUR | IBS | MST1_chr3_49678947_49694474 | MST1 |
| HG01516 | hp1 | a0001 | c0003 | t0001 | g0025 | EUR | IBS | MST1_chr3_49678947_49694474 | MST1 |
| HG01516 | hp2 | a0002 | c0002 | t0002 | g0016 | EUR | IBS | MST1_chr3_49678947_49694474 | MST1 |
| HG01517 | hp1 | a0001 | c0003 | t0001 | g0010 | EUR | IBS | MST1_chr3_49678947_49694474 | MST1 |
| HG01517 | hp2 | a0002 | c0002 | t0001 | g0003 | EUR | IBS | MST1_chr3_49678947_49694474 | MST1 |
| HG01884 | hp1 | a0001 | c0003 | t0001 | g0005 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG01884 | hp2 | a0001 | c0007 | t0001 | g0038 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG01891 | hp1 | a0002 | c0002 | t0001 | g0004 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG01891 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG01928 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01928 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01934 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01934 | hp2 | a0002 | c0002 | t0001 | g0006 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01943 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01975 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01975 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01981 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01981 | hp2 | a0001 | c0003 | t0001 | g0012 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01993 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG01993 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG02004 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG02004 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG02015 | hp1 | a0005 | c0010 | t0001 | g0030 | EAS | KHV | MST1_chr3_49678947_49694474 | MST1 |
| HG02015 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | MST1_chr3_49678947_49694474 | MST1 |
| HG02027 | hp1 | a0001 | c0003 | t0001 | g0012 | EAS | KHV | MST1_chr3_49678947_49694474 | MST1 |
| HG02027 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MST1_chr3_49678947_49694474 | MST1 |
| HG02055 | hp1 | a0002 | c0002 | t0002 | g0016 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02055 | hp2 | a0001 | c0001 | t0001 | g0002 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02071 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MST1_chr3_49678947_49694474 | MST1 |
| HG02071 | hp2 | a0010 | c0019 | t0001 | g0051 | EAS | KHV | MST1_chr3_49678947_49694474 | MST1 |
| HG02132 | hp1 | a0001 | c0006 | t0001 | g0021 | EAS | KHV | MST1_chr3_49678947_49694474 | MST1 |
| HG02132 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | KHV | MST1_chr3_49678947_49694474 | MST1 |
| HG02145 | hp1 | a0002 | c0002 | t0001 | g0006 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02145 | hp2 | a0001 | c0016 | t0001 | g0048 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02257 | hp1 | a0001 | c0004 | t0001 | g0017 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02257 | hp2 | a0001 | c0003 | t0001 | g0056 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02258 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02258 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02280 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02280 | hp2 | a0002 | c0002 | t0001 | g0006 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02293 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG02293 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | MST1_chr3_49678947_49694474 | MST1 |
| HG02451 | hp1 | a0001 | c0004 | t0001 | g0017 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02451 | hp2 | a0001 | c0004 | t0001 | g0044 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02572 | hp1 | a0001 | c0004 | t0001 | g0029 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02572 | hp2 | a0001 | c0001 | t0001 | g0060 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02602 | hp1 | a0002 | c0002 | t0002 | g0063 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02602 | hp2 | a0001 | c0001 | t0001 | g0007 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02615 | hp1 | a0002 | c0002 | t0001 | g0003 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02615 | hp2 | a0001 | c0003 | t0001 | g0010 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02622 | hp1 | a0001 | c0001 | t0001 | g0022 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02622 | hp2 | a0001 | c0003 | t0001 | g0009 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02647 | hp1 | a0001 | c0003 | t0001 | g0057 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02647 | hp2 | a0004 | c0008 | t0003 | g0033 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02683 | hp1 | a0001 | c0004 | t0001 | g0042 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02683 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02698 | hp1 | a0001 | c0001 | t0001 | g0007 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02698 | hp2 | a0002 | c0002 | t0002 | g0016 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02717 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02717 | hp2 | a0001 | c0001 | t0001 | g0015 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02723 | hp1 | a0001 | c0004 | t0001 | g0017 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02723 | hp2 | a0001 | c0007 | t0001 | g0040 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02735 | hp2 | a0002 | c0002 | t0001 | g0003 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02738 | hp2 | a0002 | c0002 | t0002 | g0016 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG02809 | hp1 | a0002 | c0002 | t0001 | g0006 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02809 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02818 | hp1 | a0001 | c0003 | t0001 | g0025 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02818 | hp2 | a0001 | c0003 | t0004 | g0031 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02886 | hp1 | a0001 | c0001 | t0001 | g0019 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02886 | hp2 | a0002 | c0002 | t0001 | g0003 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02895 | hp1 | a0001 | c0004 | t0001 | g0028 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02895 | hp2 | a0001 | c0003 | t0001 | g0005 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02896 | hp1 | a0001 | c0001 | t0001 | g0015 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02896 | hp2 | a0001 | c0003 | t0001 | g0005 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02897 | hp1 | a0001 | c0001 | t0001 | g0022 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02897 | hp2 | a0001 | c0004 | t0001 | g0027 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG02922 | hp1 | a0001 | c0004 | t0001 | g0029 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG02922 | hp2 | a0001 | c0001 | t0001 | g0055 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG02965 | hp1 | a0001 | c0003 | t0001 | g0005 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG02965 | hp2 | a0002 | c0002 | t0001 | g0004 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG02970 | hp1 | a0002 | c0002 | t0001 | g0004 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG02970 | hp2 | a0001 | c0004 | t0001 | g0017 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG02976 | hp1 | a0002 | c0002 | t0001 | g0004 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG02976 | hp2 | a0001 | c0003 | t0001 | g0009 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03017 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03041 | hp1 | a0006 | c0009 | t0001 | g0026 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG03041 | hp2 | a0001 | c0001 | t0001 | g0015 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03098 | hp2 | a0004 | c0008 | t0003 | g0023 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03130 | hp1 | a0002 | c0002 | t0001 | g0018 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03130 | hp2 | a0001 | c0004 | t0001 | g0028 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03139 | hp1 | a0001 | c0003 | t0001 | g0005 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03139 | hp2 | a0001 | c0001 | t0001 | g0015 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03195 | hp1 | a0001 | c0003 | t0001 | g0005 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03195 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03225 | hp1 | a0002 | c0002 | t0001 | g0003 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03225 | hp2 | a0001 | c0003 | t0001 | g0005 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03453 | hp1 | a0006 | c0009 | t0001 | g0026 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03453 | hp2 | a0001 | c0001 | t0001 | g0007 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03486 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03486 | hp2 | a0002 | c0002 | t0001 | g0003 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03491 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03491 | hp2 | a0001 | c0001 | t0005 | g0024 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03492 | hp1 | a0001 | c0001 | t0005 | g0024 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03492 | hp2 | a0001 | c0001 | t0001 | g0007 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03516 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03516 | hp2 | a0001 | c0003 | t0001 | g0009 | AFR | ESN | MST1_chr3_49678947_49694474 | MST1 |
| HG03540 | hp1 | a0001 | c0003 | t0001 | g0005 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG03540 | hp2 | a0001 | c0001 | t0001 | g0059 | AFR | GWD | MST1_chr3_49678947_49694474 | MST1 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0008 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03579 | hp2 | a0001 | c0001 | t0001 | g0019 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03654 | hp1 | a0002 | c0002 | t0001 | g0006 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03654 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03710 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MST1_chr3_49678947_49694474 | MST1 |
| HG03831 | hp1 | a0002 | c0002 | t0001 | g0003 | SAS | BEB | MST1_chr3_49678947_49694474 | MST1 |
| HG03831 | hp2 | a0002 | c0002 | t0002 | g0016 | SAS | BEB | MST1_chr3_49678947_49694474 | MST1 |
| HG03834 | hp1 | a0002 | c0002 | t0001 | g0004 | SAS | BEB | MST1_chr3_49678947_49694474 | MST1 |
| HG03834 | hp2 | a0001 | c0003 | t0001 | g0062 | SAS | BEB | MST1_chr3_49678947_49694474 | MST1 |
| HG03942 | hp1 | a0001 | c0007 | t0001 | g0037 | SAS | BEB | MST1_chr3_49678947_49694474 | MST1 |
| HG03942 | hp2 | a0009 | c0017 | t0001 | g0049 | SAS | BEB | MST1_chr3_49678947_49694474 | MST1 |
| HG04184 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | BEB | MST1_chr3_49678947_49694474 | MST1 |
| HG04184 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | BEB | MST1_chr3_49678947_49694474 | MST1 |
| HG04199 | hp1 | a0001 | c0006 | t0001 | g0021 | SAS | STU | MST1_chr3_49678947_49694474 | MST1 |
| HG04199 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | STU | MST1_chr3_49678947_49694474 | MST1 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0053 | SAS | STU | MST1_chr3_49678947_49694474 | MST1 |
| HG04204 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | STU | MST1_chr3_49678947_49694474 | MST1 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0061 | SAS | STU | MST1_chr3_49678947_49694474 | MST1 |
| HG04228 | hp2 | a0001 | c0001 | t0001 | g0007 | SAS | STU | MST1_chr3_49678947_49694474 | MST1 |
| NA18522 | hp1 | a0002 | c0002 | t0001 | g0006 | AFR | YRI | MST1_chr3_49678947_49694474 | MST1 |
| NA18522 | hp2 | a0001 | c0014 | t0001 | g0058 | AFR | YRI | MST1_chr3_49678947_49694474 | MST1 |
| NA18612 | hp1 | a0002 | c0002 | t0001 | g0003 | EAS | CHB | MST1_chr3_49678947_49694474 | MST1 |
| NA18612 | hp2 | a0001 | c0001 | t0006 | g0032 | EAS | CHB | MST1_chr3_49678947_49694474 | MST1 |
| NA18906 | hp1 | a0001 | c0003 | t0001 | g0012 | AFR | YRI | MST1_chr3_49678947_49694474 | MST1 |
| NA18906 | hp2 | a0002 | c0002 | t0001 | g0004 | AFR | YRI | MST1_chr3_49678947_49694474 | MST1 |
| NA18940 | hp1 | a0002 | c0002 | t0001 | g0018 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18940 | hp2 | a0005 | c0010 | t0001 | g0030 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18942 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18942 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18943 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18944 | hp1 | a0002 | c0002 | t0001 | g0003 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18944 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18945 | hp2 | a0011 | c0012 | t0001 | g0045 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18949 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18949 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18951 | hp1 | a0002 | c0002 | t0001 | g0004 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18951 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18952 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18952 | hp2 | a0001 | c0006 | t0001 | g0011 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18963 | hp1 | a0002 | c0002 | t0001 | g0003 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18963 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18965 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18968 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18968 | hp2 | a0001 | c0006 | t0001 | g0011 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18970 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18971 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18972 | hp1 | a0001 | c0006 | t0001 | g0021 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18972 | hp2 | a0002 | c0002 | t0001 | g0041 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18973 | hp1 | a0002 | c0002 | t0001 | g0003 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18973 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18974 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18979 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18979 | hp2 | a0001 | c0006 | t0001 | g0011 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18980 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18980 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18982 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18982 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18983 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18983 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18984 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18984 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18986 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18986 | hp2 | a0001 | c0015 | t0001 | g0047 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18990 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18990 | hp2 | a0001 | c0006 | t0001 | g0011 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18991 | hp1 | a0002 | c0002 | t0002 | g0020 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18991 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18998 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18998 | hp2 | a0001 | c0013 | t0001 | g0052 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18999 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18999 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19000 | hp1 | a0002 | c0002 | t0001 | g0006 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19000 | hp2 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19003 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19003 | hp2 | a0003 | c0005 | t0001 | g0036 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19012 | hp2 | a0003 | c0005 | t0001 | g0014 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19030 | hp1 | a0001 | c0003 | t0001 | g0035 | AFR | LWK | MST1_chr3_49678947_49694474 | MST1 |
| NA19030 | hp2 | a0001 | c0003 | t0004 | g0067 | AFR | LWK | MST1_chr3_49678947_49694474 | MST1 |
| NA19043 | hp1 | a0004 | c0008 | t0003 | g0023 | AFR | LWK | MST1_chr3_49678947_49694474 | MST1 |
| NA19043 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | MST1_chr3_49678947_49694474 | MST1 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19056 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19057 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19057 | hp2 | a0002 | c0002 | t0001 | g0018 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19059 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19059 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19062 | hp1 | a0003 | c0005 | t0001 | g0013 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19062 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19065 | hp1 | a0002 | c0002 | t0001 | g0003 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19065 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19070 | hp1 | a0002 | c0002 | t0001 | g0003 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19070 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19077 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19077 | hp2 | a0001 | c0006 | t0001 | g0011 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19078 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19078 | hp2 | a0001 | c0001 | t0001 | g0046 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19079 | hp1 | a0002 | c0002 | t0001 | g0004 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19079 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19088 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19090 | hp1 | a0002 | c0002 | t0001 | g0003 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19090 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19091 | hp1 | a0001 | c0006 | t0001 | g0011 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19091 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA19240 | hp1 | a0001 | c0003 | t0001 | g0009 | AFR | YRI | MST1_chr3_49678947_49694474 | MST1 |
| NA19240 | hp2 | a0001 | c0003 | t0001 | g0009 | AFR | YRI | MST1_chr3_49678947_49694474 | MST1 |
| NA20129 | hp1 | a0002 | c0002 | t0001 | g0018 | AFR | ASW | MST1_chr3_49678947_49694474 | MST1 |
| NA20129 | hp2 | a0001 | c0003 | t0001 | g0005 | AFR | ASW | MST1_chr3_49678947_49694474 | MST1 |
| NA20752 | hp1 | a0002 | c0002 | t0002 | g0020 | EUR | TSI | MST1_chr3_49678947_49694474 | MST1 |
| NA20752 | hp2 | a0001 | c0003 | t0001 | g0010 | EUR | TSI | MST1_chr3_49678947_49694474 | MST1 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0002 | EUR | TSI | MST1_chr3_49678947_49694474 | MST1 |
| NA20805 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | MST1_chr3_49678947_49694474 | MST1 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | GIH | MST1_chr3_49678947_49694474 | MST1 |
| NA20905 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | GIH | MST1_chr3_49678947_49694474 | MST1 |
| HG01123 | hp1 | a0001 | c0003 | t0001 | g0010 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG01123 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MST1_chr3_49678947_49694474 | MST1 |
| HG02109 | hp1 | a0002 | c0002 | t0001 | g0003 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02109 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02486 | hp1 | a0001 | c0004 | t0001 | g0027 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02486 | hp2 | a0001 | c0001 | t0001 | g0019 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02559 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG02559 | hp2 | a0001 | c0001 | t0001 | g0019 | AFR | ACB | MST1_chr3_49678947_49694474 | MST1 |
| HG03471 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG03471 | hp2 | a0001 | c0003 | t0001 | g0009 | AFR | MSL | MST1_chr3_49678947_49694474 | MST1 |
| HG06807 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | USA | MST1_chr3_49678947_49694474 | MST1 |
| HG06807 | hp2 | a0002 | c0002 | t0001 | g0003 | AFR | USA | MST1_chr3_49678947_49694474 | MST1 |
| NA18955 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA18955 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MST1_chr3_49678947_49694474 | MST1 |
| NA20300 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | USA | MST1_chr3_49678947_49694474 | MST1 |
| NA20300 | hp2 | a0001 | c0004 | t0001 | g0043 | AFR | USA | MST1_chr3_49678947_49694474 | MST1 |
| NA21309 | hp1 | a0007 | c0011 | t0001 | g0034 | AFR | LWK | MST1_chr3_49678947_49694474 | MST1 |
| NA21309 | hp2 | a0001 | c0004 | t0007 | g0066 | AFR | LWK | MST1_chr3_49678947_49694474 | MST1 |
| homoSapiens_chm13v2 | hp1 | a0001 | c0001 | t0001 | g0008 | REF | REF | MST1_chr3_49678947_49694474 | MST1 |
| homoSapiens_grch38 | hp1 | a0001 | c0003 | t0004 | g0031 | REF | REF | MST1_chr3_49678947_49694474 | MST1 |
| chr:pos | ref | alt | # # of ahapid:amio-acid(protein) level
|
ahapids | # # of haplotypeids
|
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr3:49684099
|
G | A | 2 | a0002a0003 | 73 | HG00099.hp2 HG00140.hp2 HG00323.hp1 others(70): Show |
missense_variant | MODERATE | c.2107C>T | p.Arg703Cys | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 18/18 | 2890/3042 | 2107/2178 | 703/725 | chr3 | 49684099 | ||
| chr3:49685328
|
C | A | 1 | a0008 | 1 | HG00323.hp2 | missense_variant | MODERATE | c.1478G>T | p.Arg493Leu | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 13/18 | 2261/3042 | 1478/2178 | 493/725 | chr3 | 49685328 | ||
| chr3:49685683
|
G | A | 1 | a0009 | 1 | HG03942.hp2 | missense_variant | MODERATE | c.1300C>T | p.Arg434Trp | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 11/18 | 2083/3042 | 1300/2178 | 434/725 | chr3 | 49685683 | ||
| chr3:49685917
|
T | C | 1 | a0010 | 1 | HG02071.hp2 | missense_variant | MODERATE | c.1193A>G | p.Lys398Arg | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 10/18 | 1976/3042 | 1193/2178 | 398/725 | chr3 | 49685917 | ||
| chr3:49686317
|
A | G | 1 | a0003 | 11 | HG00738.hp1 HG01081.hp2 HG01099.hp1 others(8): Show |
missense_variant | MODERATE | c.1012T>C | p.Cys338Arg | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/18 | 1795/3042 | 1012/2178 | 338/725 | chr3 | 49686317 | ||
| chr3:49686345
|
C | A | 1 | a0005 | 2 | HG02015.hp1 NA18940.hp2 |
missense_variant | MODERATE | c.984G>T | p.Gln328His | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/18 | 1767/3042 | 984/2178 | 328/725 | chr3 | 49686345 | ||
| chr3:49686433
|
C | T | 1 | a0007 | 1 | NA21309.hp1 | missense_variant | MODERATE | c.896G>A | p.Arg299His | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/18 | 1679/3042 | 896/2178 | 299/725 | chr3 | 49686433 | ||
| chr3:49686434
|
G | T | 1 | a0006 | 2 | HG03041.hp1 HG03453.hp1 |
missense_variant | MODERATE | c.895C>A | p.Arg299Ser | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/18 | 1678/3042 | 895/2178 | 299/725 | chr3 | 49686434 | ||
| chr3:49687032
|
C | G | 1 | a0004 | 3 | HG02647.hp2 HG03098.hp2 NA19043.hp1 |
missense_variant | MODERATE | c.643G>C | p.Gly215Arg | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 6/18 | 1426/3042 | 643/2178 | 215/725 | chr3 | 49687032 | ||
| chr3:49687149
|
C | T | 1 | a0011 | 1 | NA18945.hp2 | missense_variant&splice_region_variant | MODERATE | c.607G>A | p.Ala203Thr | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 5/18 | 1390/3042 | 607/2178 | 203/725 | chr3 | 49687149 |
| chr:pos | ref | alt | # # of chapid
|
chapids | # # of haplotypeids
|
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr3:49684340
|
G | A | 2 | a0001c0015a0010c0019 | 2 | HG02071.hp2 NA18986.hp2 |
synonymous_variant | LOW | c.1990C>T | p.Leu664Leu | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 17/18 | 2773/3042 | 1990/2178 | 664/725 | chr3 | 49684340 | ||
| chr3:49684365
|
C | A | 3 | a0001c0007a0002c0002a0003c0005 | 77 | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(74): Show |
synonymous_variant | LOW | c.1965G>T | p.Arg655Arg | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 17/18 | 2748/3042 | 1965/2178 | 655/725 | chr3 | 49684365 | ||
| chr3:49685035
|
A | G | 1 | a0001c0016 | 1 | HG02145.hp2 | synonymous_variant | LOW | c.1599T>C | p.Thr533Thr | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 14/18 | 2382/3042 | 1599/2178 | 533/725 | chr3 | 49685035 | ||
| chr3:49685297
|
C | T | 1 | a0001c0014 | 1 | NA18522.hp2 | synonymous_variant | LOW | c.1509G>A | p.Pro503Pro | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 13/18 | 2292/3042 | 1509/2178 | 503/725 | chr3 | 49685297 | ||
| chr3:49685490
|
T | G | 1 | a0001c0016 | 1 | HG02145.hp2 | synonymous_variant | LOW | c.1404A>C | p.Pro468Pro | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 12/18 | 2187/3042 | 1404/2178 | 468/725 | chr3 | 49685490 | ||
| chr3:49685708
|
A | G | 1 | a0001c0006 | 9 | HG02132.hp1 HG04199.hp1 NA18952.hp2 others(6): Show |
synonymous_variant | LOW | c.1275T>C | p.His425His | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 11/18 | 2058/3042 | 1275/2178 | 425/725 | chr3 | 49685708 | ||
| chr3:49685714
|
T | C | 1 | a0008c0018 | 1 | HG00323.hp2 | synonymous_variant | LOW | c.1269A>G | p.Glu423Glu | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 11/18 | 2052/3042 | 1269/2178 | 423/725 | chr3 | 49685714 | ||
| chr3:49685726
|
C | G | 1 | a0001c0013 | 1 | NA18998.hp2 | synonymous_variant | LOW | c.1257G>C | p.Thr419Thr | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 11/18 | 2040/3042 | 1257/2178 | 419/725 | chr3 | 49685726 | ||
| chr3:49686351
|
C | A | 11 | a0001c0001a0001c0006a0001c0013others(8): Show | 186 | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(183): Show |
synonymous_variant | LOW | c.978G>T | p.Pro326Pro | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/18 | 1761/3042 | 978/2178 | 326/725 | chr3 | 49686351 | ||
| chr3:49686384
|
G | T | 1 | a0006c0009 | 2 | HG03041.hp1 HG03453.hp1 |
synonymous_variant | LOW | c.945C>A | p.Gly315Gly | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/18 | 1728/3042 | 945/2178 | 315/725 | chr3 | 49686384 | ||
| chr3:49687375
|
T | C | 16 | a0001c0001a0001c0004a0001c0006others(13): Show | 279 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(276): Show |
synonymous_variant | LOW | c.459A>G | p.Pro153Pro | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 4/18 | 1242/3042 | 459/2178 | 153/725 | chr3 | 49687375 |
| chr:pos | ref | alt | # # of thapid:transcript level
|
thapids | # # of haplotypeids
|
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr3:49688745
|
G | A | 2 | a0001c0007t0002a0002c0002t0002 | 12 | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(9): Show |
5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-54C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/18 | chr3 | 49688745 | ||||||
| chr3:49689114
|
C | T | 1 | a0001c0001t0005 | 2 | HG03491.hp2 HG03492.hp1 |
5_prime_UTR_variant | MODIFIER | c.-423G>A | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/18 | 423 | chr3 | 49689114 | |||||
| chr3:49689251
|
G | A | 1 | a0001c0004t0007 | 1 | NA21309.hp2 | 5_prime_UTR_variant | MODIFIER | c.-560C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/18 | 560 | chr3 | 49689251 | |||||
| chr3:49689378
|
A | G | 24 | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(21): Show | 317 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
5_prime_UTR_variant | MODIFIER | c.-687T>C | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/18 | 687 | chr3 | 49689378 | |||||
| chr3:49689388
|
G | T | 1 | a0004c0008t0003 | 3 | HG02647.hp2 HG03098.hp2 NA19043.hp1 |
5_prime_UTR_variant | MODIFIER | c.-697C>A | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/18 | 697 | chr3 | 49689388 | |||||
| chr3:49689460
|
C | T | 1 | a0001c0001t0006 | 1 | NA18612.hp2 | 5_prime_UTR_variant | MODIFIER | c.-769G>A | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/18 | 769 | chr3 | 49689460 |
| chr:pos | ref | alt | # # of ghapid:genebody level
|
ghapids | # # of haplotypeids
|
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr3:49684284
|
C | T | 1 | a0001c0007t0001g0040 | 1 | HG02723.hp2 | intron_variant | MODIFIER | c.2016+30G>A | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 17/17 | chr3 | 49684284 | ||||||
| chr3:49684923
|
G | A | 19 | a0001c0003t0001g0005a0001c0003t0001g0009a0001c0003t0001g0035others(16): Show | 94 | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(91): Show |
intron_variant | MODIFIER | c.1623-39C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 14/17 | chr3 | 49684923 | ||||||
| chr3:49685107
|
T | C | 1 | a0001c0001t0001g0053 | 1 | HG04204.hp1 | intron_variant | MODIFIER | c.1545-18A>G | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 13/17 | chr3 | 49685107 | ||||||
| chr3:49685544
|
C | T | 1 | a0001c0001t0001g0055 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.1388-38G>A | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 11/17 | chr3 | 49685544 | ||||||
| chr3:49685581
|
G | A | 1 | a0001c0001t0001g0054 | 1 | HG00408.hp2 | intron_variant | MODIFIER | c.1387+15C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 11/17 | chr3 | 49685581 | ||||||
| chr3:49685786
|
C | G | 1 | a0001c0001t0001g0059 | 1 | HG03540.hp2 | intron_variant | MODIFIER | c.1251-54G>C | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 10/17 | chr3 | 49685786 | ||||||
| chr3:49686031
|
C | G | 1 | a0002c0002t0001g0041 | 1 | NA18972.hp2 | intron_variant | MODIFIER | c.1147+31G>C | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 9/17 | chr3 | 49686031 | ||||||
| chr3:49686032
|
G | C | 1 | a0002c0002t0001g0041 | 1 | NA18972.hp2 | intron_variant | MODIFIER | c.1147+30C>G | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 9/17 | chr3 | 49686032 | ||||||
| chr3:49686222
|
C | T | 1 | a0002c0002t0001g0039 | 1 | HG00738.hp2 | intron_variant | MODIFIER | c.1017-30G>A | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/17 | chr3 | 49686222 | ||||||
| chr3:49686293
|
G | GC | 14 | a0001c0001t0001g0002a0001c0001t0001g0022a0001c0001t0001g0046others(11): Show | 75 | HG00408.hp1 HG00408.hp2 HG00423.hp1 others(72): Show |
intron_variant | MODIFIER | c.1016+19dupG | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/17 | chr3 | 49686293 | ||||||
| chr3:49686293
|
G | GCC | 12 | a0001c0001t0001g0008a0001c0001t0006g0032a0001c0003t0001g0005others(9): Show | 45 | HG00099.hp2 HG00280.hp1 HG00733.hp1 others(42): Show |
intron_variant | MODIFIER | c.1016+18_1016+19dup others(2): Show |
MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/17 | chr3 | 49686293 | ||||||
| chr3:49686293
|
G | GCCC | 10 | a0001c0003t0001g0010a0001c0003t0001g0035a0001c0004t0001g0044others(7): Show | 44 | HG00140.hp2 HG00544.hp2 HG00639.hp2 others(41): Show |
intron_variant | MODIFIER | c.1016+17_1016+19dup others(3): Show |
MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/17 | chr3 | 49686293 | ||||||
| chr3:49686293
|
GC | G | 8 | a0001c0001t0001g0007a0001c0001t0001g0019a0001c0001t0001g0059others(5): Show | 21 | HG00099.hp1 HG02015.hp1 HG02132.hp2 others(18): Show |
intron_variant | MODIFIER | c.1016+19delG | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 8/17 | chr3 | 49686293 | ||||||
| chr3:49686487
|
A | G | 1 | a0001c0014t0001g0058 | 1 | NA18522.hp2 | splice_region_variant&intron_variant | LOW | c.848-6T>C | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 7/17 | chr3 | 49686487 | ||||||
| chr3:49686574
|
C | G | 1 | a0001c0001t0001g0046 | 1 | NA19078.hp2 | intron_variant | MODIFIER | c.848-93G>C | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 7/17 | chr3 | 49686574 | ||||||
| chr3:49686640
|
C | T | 1 | a0001c0003t0004g0067 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.847+44G>A | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 7/17 | chr3 | 49686640 | ||||||
| chr3:49686822
|
G | A | 3 | a0001c0001t0001g0015a0001c0001t0001g0022a0001c0001t0001g0055 | 9 | HG01109.hp1 HG01243.hp2 HG02622.hp1 others(6): Show |
intron_variant | MODIFIER | c.729-20C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 6/17 | chr3 | 49686822 | ||||||
| chr3:49686897
|
T | C | 5 | a0001c0004t0001g0027a0001c0004t0001g0028a0001c0004t0001g0042others(2): Show | 7 | HG02451.hp2 HG02486.hp1 HG02683.hp1 others(4): Show |
intron_variant | MODIFIER | c.728+50A>G | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 6/17 | chr3 | 49686897 | ||||||
| chr3:49687999
|
AG | A | 27 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0007others(24): Show | 186 | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(183): Show |
intron_variant | MODIFIER | c.95-103delC | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49687999 | ||||||
| chr3:49688035
|
G | A | 2 | a0001c0004t0001g0029a0001c0004t0007g0066 | 3 | HG02572.hp1 HG02922.hp1 NA21309.hp2 |
intron_variant | MODIFIER | c.95-138C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49688035 | ||||||
| chr3:49688252
|
G | A | 27 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0007others(24): Show | 186 | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(183): Show |
intron_variant | MODIFIER | c.94+346C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49688252 | ||||||
| chr3:49688311
|
G | A | 1 | a0001c0003t0001g0056 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.94+287C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49688311 | ||||||
| chr3:49688325
|
G | A | 1 | a0001c0003t0001g0057 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.94+273C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49688325 | ||||||
| chr3:49688426
|
G | A | 4 | a0001c0001t0001g0019a0001c0001t0001g0059a0001c0001t0001g0060others(1): Show | 7 | HG02486.hp2 HG02559.hp2 HG02572.hp2 others(4): Show |
intron_variant | MODIFIER | c.94+172C>T | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49688426 | ||||||
| chr3:49688515
|
C | T | 1 | a0002c0002t0002g0063 | 1 | HG02602.hp1 | intron_variant | MODIFIER | c.94+83G>A | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49688515 | ||||||
| chr3:49688542
|
G | C | 1 | a0001c0001t0001g0061 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.94+56C>G | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49688542 | ||||||
| chr3:49688595
|
T | C | 1 | a0001c0003t0001g0062 | 1 | HG03834.hp2 | splice_region_variant&intron_variant | LOW | c.94+3A>G | MST1 | ENSG00000173531.16 | transcript | ENST00000449682.3 | protein_coding | 1/17 | chr3 | 49688595 |