JoGo LogoJoint Open Genome and Omics Platform (JoGo)
  • Home
    • General
    • Gene
    • Region
    • Variant
    • Haplotype
    • Haplotype by sample
    • ClinVar
    • GWASCatalog
    • GTEx
    • HaplotypeQTL
    • Haplotype
    • Position
    • Clinvar
    • Gene
    • Variant
    • Haplotype
    • Sample
    • FAQ
    • Contact
    • Fundings
    • Developer
    • ChIP-Atlas PeakBrowser
    • ToGoVAR
    • MGeND
    • Nagasaki Lab

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   ATG4A_chrX_108086778_108159671  ATG4A_chrX_108086778_108159671 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 115201
ensemblid ENSG00000101844.18
hgncid 16489
symbol ATG4A
name autophagy related 4A cysteine peptidase
refseq_nuc NM_052936.5
refseq_prot NP_443168.2
ensembl_nuc ENST00000372232.8
ensembl_prot ENSP00000361306.3
mane_status MANE Select
chr chrX
start 108091778
end 108154671
strand +
ver v1.2
region chrX:108091778-108154671
region5000 chrX:108086778-108159671
regionname0 ATG4A_chrX_108091778_108154671
regionname5000 ATG4A_chrX_108086778_108159671

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 398 245 66 47 89 13 28 68 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0002 0/0 398 4 4 0 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 1197 236 59 46 88 13 28 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
c0002 0/0 1197 7 6 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
c0003 0/0 1197 4 4 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
c0004 0/0 1197 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
c0005 0/0 1197 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 1/1 1009 220 57 43 79 12 27 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
t0002 0/0 1009 23 8 4 10 0 1 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
t0003 0/0 1009 4 4 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
t0004 0/0 1009 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
t0005 0/0 1009 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 5 1 0 4 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0002 0/0 4 0 0 4 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0003 0/0 4 0 0 4 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0004 0/0 3 0 2 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0005 0/0 3 0 2 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0006 0/0 3 0 1 0 2 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0007 0/0 2 0 2 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0008 0/1 2 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0009 0/0 2 0 1 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0010 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0011 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0012 0/0 2 0 0 0 1 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0013 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0014 0/0 2 0 2 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0015 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0016 0/0 2 2 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0017 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0018 0/0 2 0 2 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0019 0/0 2 0 1 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0020 0/0 2 0 0 0 2 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0021 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0022 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0023 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0024 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0025 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0026 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0027 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0028 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0029 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0030 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0031 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0032 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0033 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0034 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0035 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0036 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0037 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0038 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0039 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0040 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0041 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0042 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0043 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0044 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0045 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0046 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0047 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0048 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0049 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0050 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0051 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0052 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0053 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0054 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0055 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0056 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0057 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0058 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0059 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0060 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0061 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0062 1/0 1 0 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0063 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0064 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0065 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0066 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0067 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0068 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0069 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0070 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0071 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0072 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0073 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0074 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0075 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0076 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0077 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0078 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0079 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0080 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0081 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0082 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0083 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0084 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0085 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0086 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0087 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0088 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0089 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0090 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0091 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0092 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0093 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0094 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0095 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0096 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0097 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0098 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0099 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0100 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0101 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0102 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0103 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0104 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0105 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0106 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0107 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0108 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0109 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0110 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0111 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0112 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0113 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0114 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0115 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0116 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0117 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0118 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0119 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0120 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0121 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0122 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0123 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0124 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0125 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0126 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0127 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0128 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0129 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0130 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0131 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0132 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0133 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0134 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0135 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0136 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0137 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0138 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0139 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0140 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0141 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0142 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0143 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0144 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0145 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0146 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0147 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0148 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0149 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0150 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0151 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0152 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0153 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0154 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0155 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0156 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0157 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0158 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0159 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0160 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0161 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0162 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0163 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0164 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0165 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0166 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0167 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0168 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0169 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0170 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0171 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0172 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0173 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0174 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0175 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0176 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0177 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0178 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0179 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0180 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0181 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0182 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0183 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0184 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0185 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0186 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0187 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0188 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0189 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0190 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0191 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0192 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0193 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0194 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0195 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0196 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0197 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0198 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0199 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0200 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0201 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0202 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0203 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0204 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0205 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0206 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0207 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0208 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0209 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0210 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0211 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0212 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0213 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0214 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0215 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0216 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0217 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0218 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
g0219 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/1 1197 236 59 46 88 13 28 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0002 0/0 1197 7 6 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0004 0/0 1197 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0005 0/0 1197 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0002c0003 0/0 1197 4 4 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 1/1 2205 207 46 42 78 12 27 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0001t0002 0/0 2205 23 8 4 10 0 1 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0001t0003 0/0 2205 4 4 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0001t0004 0/0 2205 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0001t0005 0/0 2205 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0002t0001 0/0 2205 7 6 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0004t0001 0/0 2205 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0001c0005t0001 0/0 2205 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671
a0002c0003t0001 0/0 2205 4 4 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A copy fasta chrX 108086778 108159671

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 5 1 0 4 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0002 0/0 4 0 0 4 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0003 0/0 4 0 0 4 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0004 0/0 3 0 2 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0005 0/0 3 0 2 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0006 0/0 3 0 1 0 2 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0007 0/0 2 0 2 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0008 0/1 2 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0009 0/0 2 0 1 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0010 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0011 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0012 0/0 2 0 0 0 1 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0013 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0014 0/0 2 0 2 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0015 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0016 0/0 2 2 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0019 0/0 2 0 1 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0020 0/0 2 0 0 0 2 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0022 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0023 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0024 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0025 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0026 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0027 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0028 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0029 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0030 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0031 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0032 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0033 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0034 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0035 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0036 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0037 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0038 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0039 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0040 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0041 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0042 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0043 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0044 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0045 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0046 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0047 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0048 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0049 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0050 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0051 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0053 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0054 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0055 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0056 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0057 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0058 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0059 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0060 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0061 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0062 1/0 1 0 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0063 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0064 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0065 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0066 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0067 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0068 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0069 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0070 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0071 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0072 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0073 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0074 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0075 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0076 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0077 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0078 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0079 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0080 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0081 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0082 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0083 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0084 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0085 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0086 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0087 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0088 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0089 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0090 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0091 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0092 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0093 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0094 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0095 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0096 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0097 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0098 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0099 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0100 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0101 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0102 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0103 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0104 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0105 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0106 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0107 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0108 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0109 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0110 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0111 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0112 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0113 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0114 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0115 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0116 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0117 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0118 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0119 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0120 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0121 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0122 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0123 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0124 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0125 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0126 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0127 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0128 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0129 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0130 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0131 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0132 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0133 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0134 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0135 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0136 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0137 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0138 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0139 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0140 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0141 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0152 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0153 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0154 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0155 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0156 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0157 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0158 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0159 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0160 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0161 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0162 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0164 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0165 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0166 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0167 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0168 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0169 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0183 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0191 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0192 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0193 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0194 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0195 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0196 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0197 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0198 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0199 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0200 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0201 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0202 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0203 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0206 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0207 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0208 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0209 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0210 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0211 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0212 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0215 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0216 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0217 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0001g0218 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0017 0/0 2 0 0 2 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0018 0/0 2 0 2 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0170 0/0 1 0 0 0 0 1 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0171 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0172 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0173 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0174 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0175 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0176 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0177 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0178 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0179 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0180 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0181 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0182 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0184 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0186 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0187 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0188 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0189 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0002g0190 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0003g0149 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0003g0150 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0003g0151 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0003g0185 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0004g0052 0/0 1 0 0 0 1 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0001t0005g0163 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0002t0001g0142 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0002t0001g0143 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0002t0001g0144 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0002t0001g0145 0/0 1 0 1 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0002t0001g0146 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0002t0001g0147 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0002t0001g0148 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0004t0001g0021 0/0 1 0 0 1 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0001c0005t0001g0219 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0002c0003t0001g0204 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0002c0003t0001g0205 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0002c0003t0001g0213 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
a0002c0003t0001g0214 0/0 1 1 0 0 0 0 ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0001 g0033 EUR GBR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00099 hp2 a0001 c0001 t0001 g0019 EUR GBR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00140 hp1 a0001 c0001 t0001 g0005 EUR GBR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00280 hp1 a0001 c0001 t0001 g0006 EUR FIN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00323 hp1 a0001 c0001 t0001 g0006 EUR FIN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00323 hp2 a0001 c0001 t0001 g0023 EUR FIN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00423 hp1 a0001 c0001 t0001 g0207 EAS CHS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00423 hp2 a0001 c0001 t0001 g0011 EAS CHS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00558 hp1 a0001 c0001 t0002 g0174 EAS CHS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00558 hp2 a0001 c0001 t0001 g0025 EAS CHS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00609 hp1 a0001 c0001 t0001 g0027 EAS CHS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00621 hp1 a0001 c0001 t0001 g0117 EAS CHS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00639 hp1 a0001 c0001 t0001 g0191 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00639 hp2 a0001 c0001 t0001 g0112 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00642 hp1 a0001 c0001 t0001 g0009 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00673 hp1 a0001 c0001 t0001 g0009 EAS CHS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00733 hp1 a0001 c0001 t0001 g0109 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00733 hp2 a0001 c0001 t0001 g0019 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00738 hp1 a0001 c0001 t0001 g0006 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00741 hp1 a0001 c0001 t0001 g0169 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG00741 hp2 a0001 c0001 t0001 g0113 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01069 hp1 a0001 c0001 t0001 g0014 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01071 hp1 a0001 c0001 t0001 g0074 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01071 hp2 a0001 c0001 t0001 g0014 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01074 hp1 a0001 c0001 t0001 g0041 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01081 hp1 a0001 c0001 t0001 g0043 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01081 hp2 a0001 c0001 t0002 g0190 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01099 hp1 a0001 c0001 t0001 g0045 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01106 hp1 a0001 c0002 t0001 g0145 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01109 hp1 a0001 c0001 t0001 g0183 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01167 hp1 a0001 c0001 t0001 g0005 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01169 hp1 a0001 c0001 t0001 g0200 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01169 hp2 a0001 c0001 t0001 g0094 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01175 hp1 a0001 c0001 t0001 g0197 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01175 hp2 a0001 c0001 t0001 g0040 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01192 hp1 a0001 c0001 t0001 g0116 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01243 hp1 a0001 c0001 t0001 g0193 AMR PUR ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01255 hp1 a0001 c0001 t0001 g0004 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01256 hp1 a0001 c0001 t0001 g0087 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01257 hp1 a0001 c0001 t0001 g0202 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01257 hp2 a0001 c0001 t0001 g0007 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01258 hp1 a0001 c0001 t0001 g0007 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01261 hp1 a0001 c0001 t0001 g0092 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01358 hp1 a0001 c0001 t0001 g0004 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01361 hp1 a0001 c0001 t0001 g0048 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01361 hp2 a0001 c0001 t0002 g0187 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01433 hp1 a0001 c0001 t0001 g0037 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01515 hp1 a0001 c0001 t0001 g0075 EUR IBS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01516 hp1 a0001 c0001 t0001 g0020 EUR IBS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01516 hp2 a0001 c0001 t0004 g0052 EUR IBS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01517 hp1 a0001 c0001 t0001 g0020 EUR IBS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01517 hp2 a0001 c0001 t0001 g0012 EUR IBS ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01884 hp1 a0001 c0002 t0001 g0147 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01884 hp2 a0001 c0001 t0002 g0178 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01928 hp1 a0001 c0001 t0001 g0103 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01934 hp1 a0001 c0001 t0001 g0122 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01943 hp1 a0001 c0001 t0001 g0102 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01952 hp1 a0001 c0001 t0001 g0080 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01975 hp1 a0001 c0001 t0001 g0101 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01975 hp2 a0001 c0001 t0002 g0018 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01978 hp1 a0001 c0001 t0002 g0018 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01978 hp2 a0001 c0001 t0001 g0078 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01981 hp1 a0001 c0001 t0001 g0124 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01981 hp2 a0001 c0001 t0001 g0008 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02015 hp1 a0001 c0001 t0001 g0097 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02027 hp1 a0001 c0001 t0001 g0065 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02040 hp1 a0001 c0001 t0001 g0132 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02055 hp1 a0001 c0005 t0001 g0219 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02056 hp1 a0001 c0001 t0001 g0001 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02071 hp1 a0001 c0001 t0001 g0044 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02074 hp1 a0001 c0001 t0001 g0123 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02080 hp1 a0001 c0001 t0001 g0120 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02080 hp2 a0001 c0001 t0001 g0168 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02083 hp1 a0001 c0001 t0001 g0093 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02129 hp1 a0001 c0001 t0001 g0068 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02132 hp1 a0001 c0001 t0001 g0215 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02135 hp1 a0001 c0001 t0001 g0001 EAS KHV ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02145 hp1 a0001 c0001 t0001 g0016 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02257 hp1 a0001 c0001 t0001 g0216 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02257 hp2 a0001 c0001 t0001 g0063 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02258 hp1 a0001 c0002 t0001 g0142 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02280 hp1 a0002 c0003 t0001 g0205 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02280 hp2 a0001 c0001 t0001 g0083 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02300 hp1 a0001 c0001 t0001 g0067 AMR PEL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02451 hp1 a0001 c0001 t0001 g0210 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02451 hp2 a0001 c0001 t0005 g0163 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02572 hp1 a0001 c0001 t0001 g0156 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02602 hp1 a0001 c0001 t0001 g0088 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02622 hp1 a0001 c0001 t0001 g0166 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02622 hp2 a0001 c0001 t0001 g0127 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02630 hp1 a0001 c0001 t0001 g0055 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02630 hp2 a0002 c0003 t0001 g0214 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02647 hp1 a0001 c0001 t0001 g0030 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02683 hp1 a0001 c0001 t0001 g0192 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02683 hp2 a0001 c0001 t0001 g0129 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02698 hp1 a0001 c0001 t0001 g0198 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02717 hp1 a0001 c0001 t0001 g0158 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02723 hp1 a0001 c0001 t0002 g0179 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02723 hp2 a0001 c0001 t0003 g0151 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02735 hp1 a0001 c0001 t0001 g0038 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02738 hp1 a0001 c0001 t0001 g0076 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02809 hp1 a0001 c0001 t0001 g0051 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02809 hp2 a0001 c0001 t0001 g0209 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02818 hp1 a0001 c0001 t0001 g0153 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02818 hp2 a0001 c0001 t0001 g0061 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02895 hp1 a0001 c0002 t0001 g0143 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02897 hp1 a0001 c0001 t0001 g0082 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02897 hp2 a0001 c0002 t0001 g0144 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02922 hp1 a0001 c0001 t0002 g0189 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02922 hp2 a0001 c0001 t0001 g0159 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02965 hp1 a0001 c0002 t0001 g0146 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02970 hp1 a0001 c0001 t0001 g0139 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02970 hp2 a0001 c0001 t0001 g0001 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03017 hp1 a0001 c0001 t0001 g0060 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03041 hp1 a0001 c0001 t0003 g0150 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03041 hp2 a0001 c0001 t0001 g0140 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03098 hp1 a0001 c0001 t0001 g0162 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03130 hp1 a0001 c0001 t0001 g0161 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03139 hp1 a0001 c0001 t0001 g0141 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03195 hp1 a0001 c0001 t0001 g0059 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03195 hp2 a0001 c0001 t0001 g0160 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03209 hp1 a0002 c0003 t0001 g0204 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03225 hp1 a0001 c0001 t0001 g0072 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03239 hp1 a0001 c0001 t0001 g0130 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03239 hp2 a0001 c0001 t0001 g0115 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03453 hp1 a0001 c0001 t0001 g0111 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03453 hp2 a0001 c0001 t0001 g0208 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03486 hp1 a0001 c0001 t0001 g0211 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03486 hp2 a0001 c0001 t0001 g0167 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03490 hp1 a0001 c0001 t0001 g0064 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03491 hp1 a0001 c0001 t0001 g0199 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03491 hp2 a0001 c0001 t0001 g0114 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03492 hp1 a0001 c0001 t0001 g0201 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03516 hp1 a0001 c0001 t0001 g0131 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03516 hp2 a0001 c0001 t0001 g0212 AFR ESN ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03540 hp1 a0001 c0001 t0001 g0165 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03540 hp2 a0001 c0001 t0001 g0126 AFR GWD ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03579 hp1 a0001 c0001 t0003 g0185 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03654 hp1 a0001 c0001 t0001 g0105 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03669 hp1 a0001 c0001 t0001 g0004 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03669 hp2 a0001 c0001 t0001 g0196 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03688 hp1 a0001 c0001 t0001 g0194 SAS STU ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03710 hp1 a0001 c0001 t0001 g0053 SAS PJL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03831 hp1 a0001 c0001 t0002 g0170 SAS BEB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03831 hp2 a0001 c0001 t0001 g0217 SAS BEB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03942 hp1 a0001 c0001 t0001 g0136 SAS BEB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG04115 hp1 a0001 c0001 t0001 g0096 SAS STU ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG04184 hp1 a0001 c0001 t0001 g0024 SAS BEB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG04184 hp2 a0001 c0001 t0001 g0035 SAS BEB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG04199 hp1 a0001 c0001 t0001 g0084 SAS STU ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG04204 hp1 a0001 c0001 t0001 g0012 SAS STU ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG04228 hp1 a0001 c0001 t0001 g0218 SAS STU ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18522 hp1 a0001 c0001 t0002 g0181 AFR YRI ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18612 hp1 a0001 c0001 t0001 g0077 EAS CHB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18747 hp1 a0001 c0001 t0001 g0002 EAS CHB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18940 hp1 a0001 c0001 t0001 g0107 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18943 hp1 a0001 c0001 t0001 g0085 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18944 hp1 a0001 c0001 t0002 g0188 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18945 hp1 a0001 c0001 t0001 g0128 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18948 hp1 a0001 c0001 t0001 g0026 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18952 hp1 a0001 c0001 t0001 g0138 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18953 hp1 a0001 c0001 t0001 g0104 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18959 hp1 a0001 c0001 t0001 g0098 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18960 hp1 a0001 c0001 t0001 g0090 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18961 hp1 a0001 c0001 t0001 g0086 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18962 hp1 a0001 c0001 t0001 g0003 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18965 hp1 a0001 c0001 t0001 g0029 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18966 hp1 a0001 c0001 t0001 g0013 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18970 hp1 a0001 c0001 t0001 g0022 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18971 hp1 a0001 c0001 t0001 g0058 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18974 hp1 a0001 c0001 t0001 g0073 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18975 hp1 a0001 c0001 t0001 g0134 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18975 hp2 a0001 c0001 t0002 g0177 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18977 hp1 a0001 c0001 t0001 g0003 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18982 hp1 a0001 c0001 t0001 g0050 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18983 hp1 a0001 c0001 t0001 g0054 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18984 hp1 a0001 c0001 t0002 g0176 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18985 hp1 a0001 c0001 t0001 g0049 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18986 hp1 a0001 c0001 t0001 g0002 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18988 hp1 a0001 c0001 t0001 g0015 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18989 hp1 a0001 c0001 t0001 g0089 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18990 hp1 a0001 c0001 t0001 g0015 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18994 hp1 a0001 c0001 t0001 g0003 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18995 hp1 a0001 c0001 t0001 g0028 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18999 hp1 a0001 c0001 t0001 g0066 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18999 hp2 a0001 c0001 t0001 g0079 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19000 hp1 a0001 c0001 t0001 g0036 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19003 hp1 a0001 c0001 t0001 g0010 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19003 hp2 a0001 c0001 t0002 g0171 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19004 hp1 a0001 c0001 t0001 g0095 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19005 hp1 a0001 c0001 t0001 g0031 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19006 hp1 a0001 c0001 t0001 g0047 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19007 hp1 a0001 c0001 t0002 g0173 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19009 hp1 a0001 c0001 t0001 g0010 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19010 hp1 a0001 c0001 t0002 g0017 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19010 hp2 a0001 c0001 t0001 g0003 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19012 hp1 a0001 c0001 t0001 g0081 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19030 hp1 a0001 c0002 t0001 g0148 AFR LWK ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19030 hp2 a0001 c0001 t0001 g0154 AFR LWK ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19043 hp1 a0001 c0001 t0003 g0149 AFR LWK ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19055 hp1 a0001 c0001 t0001 g0100 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19056 hp1 a0001 c0001 t0002 g0172 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19058 hp1 a0001 c0001 t0001 g0046 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19060 hp1 a0001 c0001 t0001 g0069 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19062 hp1 a0001 c0001 t0001 g0135 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19065 hp1 a0001 c0001 t0001 g0091 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19065 hp2 a0001 c0001 t0001 g0042 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19066 hp1 a0001 c0001 t0001 g0011 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19067 hp1 a0001 c0001 t0001 g0034 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19068 hp1 a0001 c0001 t0001 g0106 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19070 hp1 a0001 c0001 t0001 g0013 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19072 hp1 a0001 c0001 t0001 g0039 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19076 hp1 a0001 c0004 t0001 g0021 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19077 hp1 a0001 c0001 t0001 g0002 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19077 hp2 a0001 c0001 t0002 g0017 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19079 hp1 a0001 c0001 t0001 g0133 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19082 hp1 a0001 c0001 t0001 g0001 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19083 hp1 a0001 c0001 t0001 g0099 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19085 hp1 a0001 c0001 t0001 g0125 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19086 hp1 a0001 c0001 t0001 g0002 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19088 hp1 a0001 c0001 t0001 g0001 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19089 hp1 a0001 c0001 t0001 g0137 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19090 hp1 a0001 c0001 t0002 g0175 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19090 hp2 a0001 c0001 t0001 g0070 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19091 hp1 a0001 c0001 t0001 g0056 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19240 hp1 a0001 c0001 t0001 g0157 AFR YRI ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA19240 hp2 a0001 c0001 t0001 g0110 AFR YRI ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA20129 hp1 a0001 c0001 t0001 g0121 AFR ASW ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA20129 hp2 a0001 c0001 t0001 g0032 AFR ASW ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA20752 hp1 a0001 c0001 t0001 g0203 EUR TSI ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA20805 hp1 a0001 c0001 t0001 g0195 EUR TSI ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA20905 hp1 a0001 c0001 t0001 g0119 SAS GIH ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01123 hp1 a0001 c0001 t0001 g0108 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG01123 hp2 a0001 c0001 t0001 g0005 AMR CLM ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02109 hp1 a0001 c0001 t0002 g0182 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02109 hp2 a0002 c0003 t0001 g0213 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02486 hp1 a0001 c0001 t0002 g0184 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02559 hp1 a0001 c0001 t0001 g0206 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG02559 hp2 a0001 c0001 t0001 g0016 AFR ACB ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG03471 hp1 a0001 c0001 t0002 g0180 AFR MSL ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG06807 hp1 a0001 c0001 t0002 g0186 AFR USA ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
HG06807 hp2 a0001 c0001 t0001 g0164 AFR USA ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA18955 hp1 a0001 c0001 t0001 g0057 EAS JPT ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA20300 hp1 a0001 c0001 t0001 g0155 AFR USA ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA20300 hp2 a0001 c0001 t0001 g0071 AFR USA ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA21309 hp1 a0001 c0001 t0001 g0152 AFR LWK ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
NA21309 hp2 a0001 c0001 t0001 g0118 AFR LWK ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
homoSapiens_chm13v2 hp1 a0001 c0001 t0001 g0008 REF REF ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671
homoSapiens_grch38 hp1 a0001 c0001 t0001 g0062 REF REF ATG4A_chrX_108086778_108159671 ATG4A chrX 108086778 108159671

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:108137163 A
A
 C
C
 1 a0002
a0002
 4 HG02109.hp2
HG02280.hp1
HG02630.hp2
others(1): Show 
HG02109.hp2
HG02280.hp1
HG02630.hp2
HG03209.hp1
 missense_variant MODERATE c.540A>C
c.540A>C
 p.Glu180Asp
p.Glu180Asp
 ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 7/13 589/2205 540/1197 180/398 chrX 108137163

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:108131267 G
G
 T
T
 1 a0001c0005
a0001c0005
 1 HG02055.hp1
HG02055.hp1
 synonymous_variant LOW c.201G>T
c.201G>T
 p.Thr67Thr
p.Thr67Thr
 ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/13 250/2205 201/1197 67/398 chrX 108131267
chrX:108150219 G
G
 A
A
 1 a0001c0002
a0001c0002
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 synonymous_variant LOW c.882G>A
c.882G>A
 p.Thr294Thr
p.Thr294Thr
 ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/13 931/2205 882/1197 294/398 chrX 108150219
chrX:108153029 A
A
 G
G
 1 a0001c0004
a0001c0004
 1 NA19076.hp1
NA19076.hp1
 synonymous_variant LOW c.1068A>G
c.1068A>G
 p.Pro356Pro
p.Pro356Pro
 ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 12/13 1117/2205 1068/1197 356/398 chrX 108153029

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:108153728 A
A
 G
G
 1 a0001c0001t0002
a0001c0001t0002
 23 HG00558.hp1
HG01081.hp2
HG01361.hp2
others(20): Show 
HG00558.hp1
HG01081.hp2
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 3_prime_UTR_variant MODIFIER c.*16A>G
c.*16A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 13/13 16 chrX 108153728
chrX:108154176 G
G
 T
T
 1 a0001c0001t0003
a0001c0001t0003
 4 HG02723.hp2
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02723.hp2
HG03041.hp1
HG03579.hp1
NA19043.hp1
 3_prime_UTR_variant MODIFIER c.*464G>T
c.*464G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 13/13 464 chrX 108154176
chrX:108154392 G
G
 T
T
 1 a0001c0001t0002
a0001c0001t0002
 23 HG00558.hp1
HG01081.hp2
HG01361.hp2
others(20): Show 
HG00558.hp1
HG01081.hp2
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 3_prime_UTR_variant MODIFIER c.*680G>T
c.*680G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 13/13 680 chrX 108154392
chrX:108154422 C
C
 T
T
 1 a0001c0001t0005
a0001c0001t0005
 1 HG02451.hp2
HG02451.hp2
 3_prime_UTR_variant MODIFIER c.*710C>T
c.*710C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 13/13 710 chrX 108154422
chrX:108154565 G
G
 A
A
 1 a0001c0001t0004
a0001c0001t0004
 1 HG01516.hp2
HG01516.hp2
 3_prime_UTR_variant MODIFIER c.*853G>A
c.*853G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 13/13 853 chrX 108154565

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:108092031 A
A
 C
C
 85 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(82): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 97 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(94): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.10+195A>C
c.10+195A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108092031
chrX:108092477 C
C
 T
T
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.10+641C>T
c.10+641C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108092477
chrX:108092481 A
A
 C
C
 58 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(55): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 70 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(67): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.10+645A>C
c.10+645A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108092481
chrX:108092720 C
C
 CT
CT
 4 a0001c0001t0001g0016
a0001c0001t0001g0139
a0001c0001t0001g0140
others(1): Show 
a0001c0001t0001g0016
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
 5 HG02145.hp1
HG02559.hp2
HG02970.hp1
others(2): Show 
HG02145.hp1
HG02559.hp2
HG02970.hp1
HG03041.hp2
HG03139.hp1
 intron_variant MODIFIER c.10+891dupT
c.10+891dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108092720
chrX:108092824 A
A
 G
G
 1 a0001c0001t0001g0138
a0001c0001t0001g0138
 1 NA18952.hp1
NA18952.hp1
 intron_variant MODIFIER c.10+988A>G
c.10+988A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108092824
chrX:108092980 T
T
 C
C
 10 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
others(7): Show 
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 10 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(7): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02723.hp2
HG02895.hp1
HG02897.hp2
HG02965.hp1
HG03041.hp1
NA19030.hp1
NA19043.hp1
 intron_variant MODIFIER c.10+1144T>C
c.10+1144T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108092980
chrX:108093152 TA
TA
 T
T
 2 a0001c0001t0001g0015
a0001c0001t0001g0137
a0001c0001t0001g0015
a0001c0001t0001g0137
 3 NA18988.hp1
NA18990.hp1
NA19089.hp1
NA18988.hp1
NA18990.hp1
NA19089.hp1
 intron_variant MODIFIER c.10+1319delA
c.10+1319delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108093152
chrX:108093421 G
G
 C
C
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.10+1585G>C
c.10+1585G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108093421
chrX:108093723 A
A
 G
G
 3 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
 3 HG02723.hp2
HG03041.hp1
NA19043.hp1
HG02723.hp2
HG03041.hp1
NA19043.hp1
 intron_variant MODIFIER c.10+1887A>G
c.10+1887A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108093723
chrX:108094055 G
G
 T
T
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.10+2219G>T
c.10+2219G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108094055
chrX:108094154 T
T
 A
A
 1 a0001c0001t0001g0007
a0001c0001t0001g0007
 2 HG01257.hp2
HG01258.hp1
HG01257.hp2
HG01258.hp1
 intron_variant MODIFIER c.10+2318T>A
c.10+2318T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108094154
chrX:108094263 G
G
 A
A
 85 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(82): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 97 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(94): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.10+2427G>A
c.10+2427G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108094263
chrX:108094956 T
T
 C
C
 3 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
 3 HG02723.hp2
HG03041.hp1
NA19043.hp1
HG02723.hp2
HG03041.hp1
NA19043.hp1
 intron_variant MODIFIER c.10+3120T>C
c.10+3120T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108094956
chrX:108095084 C
C
 T
T
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.10+3248C>T
c.10+3248C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108095084
chrX:108095137 G
G
 A
A
 1 a0001c0001t0001g0152
a0001c0001t0001g0152
 1 NA21309.hp1
NA21309.hp1
 intron_variant MODIFIER c.10+3301G>A
c.10+3301G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108095137
chrX:108095322 A
A
 T
T
 82 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(79): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 94 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(91): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.10+3486A>T
c.10+3486A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108095322
chrX:108095627 A
A
 T
T
 1 a0001c0001t0001g0218
a0001c0001t0001g0218
 1 HG04228.hp1
HG04228.hp1
 intron_variant MODIFIER c.10+3791A>T
c.10+3791A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108095627
chrX:108095711 C
C
 CT
CT
 1 a0001c0001t0001g0135
a0001c0001t0001g0135
 1 NA19062.hp1
NA19062.hp1
 intron_variant MODIFIER c.10+3891dupT
c.10+3891dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108095711
chrX:108095711 CT
CT
 C
C
 78 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(75): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0004t0001g0021
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 90 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(87): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02922.hp1
HG02922.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19076.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.10+3891delT
c.10+3891delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108095711
chrX:108096644 A
A
 ATATTT
ATATTT
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.10+4828_10+4832dup
others(5): Show 
c.10+4828_10+4832dupTTATT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108096644
chrX:108096687 G
G
 GTATGT
GTATGT
 2 a0001c0001t0001g0022
a0001c0001t0001g0169
a0001c0001t0001g0022
a0001c0001t0001g0169
 2 HG00741.hp1
NA18970.hp1
HG00741.hp1
NA18970.hp1
 intron_variant MODIFIER c.10+4875_10+4879dup
others(5): Show 
c.10+4875_10+4879dupGTTAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108096687
chrX:108096687 G
G
 GTATGTTA
others(3): Show 
GTATGTTATGT
 1 a0001c0002t0001g0142
a0001c0002t0001g0142
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.10+4870_10+4879dup
others(10): Show 
c.10+4870_10+4879dupGTTATGTTAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108096687
chrX:108096797 A
A
 C
C
 1 a0001c0001t0001g0134
a0001c0001t0001g0134
 1 NA18975.hp1
NA18975.hp1
 intron_variant MODIFIER c.10+4961A>C
c.10+4961A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108096797
chrX:108097059 T
T
 C
C
 1 a0001c0001t0001g0023
a0001c0001t0001g0023
 1 HG00323.hp2
HG00323.hp2
 intron_variant MODIFIER c.10+5223T>C
c.10+5223T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108097059
chrX:108097289 G
G
 C
C
 1 a0001c0001t0001g0024
a0001c0001t0001g0024
 1 HG04184.hp1
HG04184.hp1
 intron_variant MODIFIER c.10+5453G>C
c.10+5453G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108097289
chrX:108097488 A
A
 T
T
 166 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(163): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0086
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0095
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0004t0001g0021
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 193 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(190): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00423.hp2
HG00558.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00733.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01358.hp1
HG01361.hp2
HG01515.hp1
HG01516.hp1
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02074.hp1
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02602.hp1
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG02970.hp2
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18966.hp1
NA18970.hp1
NA18974.hp1
NA18975.hp1
NA18975.hp2
NA18977.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18999.hp2
NA19003.hp1
NA19003.hp2
NA19004.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19062.hp1
NA19065.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19076.hp1
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA20905.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.10+5652A>T
c.10+5652A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108097488
chrX:108097760 C
C
 T
T
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.10+5924C>T
c.10+5924C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108097760
chrX:108098010 G
G
 A
A
 2 a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0143
a0001c0002t0001g0144
 2 HG02895.hp1
HG02897.hp2
HG02895.hp1
HG02897.hp2
 intron_variant MODIFIER c.10+6174G>A
c.10+6174G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108098010
chrX:108098014 A
A
 AG
AG
 1 a0001c0001t0001g0073
a0001c0001t0001g0073
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.10+6180dupG
c.10+6180dupG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108098014
chrX:108098068 C
C
 G
G
 34 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(31): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 44 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(41): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02056.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02809.hp2
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp2
HG04228.hp1
NA19082.hp1
NA19088.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.10+6232C>G
c.10+6232C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108098068
chrX:108098256 C
C
 A
A
 1 a0001c0001t0001g0025
a0001c0001t0001g0025
 1 HG00558.hp2
HG00558.hp2
 intron_variant MODIFIER c.10+6420C>A
c.10+6420C>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108098256
chrX:108098305 A
A
 G
G
 1 a0001c0001t0002g0190
a0001c0001t0002g0190
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.10+6469A>G
c.10+6469A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108098305
chrX:108098410 T
T
 C
C
 1 a0001c0001t0001g0191
a0001c0001t0001g0191
 1 HG00639.hp1
HG00639.hp1
 intron_variant MODIFIER c.10+6574T>C
c.10+6574T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108098410
chrX:108098577 C
C
 T
T
 1 a0001c0001t0002g0190
a0001c0001t0002g0190
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.10+6741C>T
c.10+6741C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108098577
chrX:108098928 C
C
 T
T
 2 a0001c0001t0001g0133
a0001c0001t0001g0217
a0001c0001t0001g0133
a0001c0001t0001g0217
 2 HG03831.hp2
NA19079.hp1
HG03831.hp2
NA19079.hp1
 intron_variant MODIFIER c.10+7092C>T
c.10+7092C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108098928
chrX:108098977 A
A
 G
G
 1 a0001c0001t0001g0132
a0001c0001t0001g0132
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.10+7141A>G
c.10+7141A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108098977
chrX:108099123 C
C
 T
T
 1 a0001c0001t0001g0164
a0001c0001t0001g0164
 1 HG06807.hp2
HG06807.hp2
 intron_variant MODIFIER c.10+7287C>T
c.10+7287C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108099123
chrX:108099164 AT
AT
 A
A
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.10+7338delT
c.10+7338delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108099164
chrX:108099698 G
G
 T
T
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.10+7862G>T
c.10+7862G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108099698
chrX:108099790 A
A
 T
T
 2 a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0143
a0001c0002t0001g0144
 2 HG02895.hp1
HG02897.hp2
HG02895.hp1
HG02897.hp2
 intron_variant MODIFIER c.10+7954A>T
c.10+7954A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108099790
chrX:108099939 G
G
 C
C
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.10+8103G>C
c.10+8103G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108099939
chrX:108100098 C
C
 T
T
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.10+8262C>T
c.10+8262C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108100098
chrX:108100261 T
T
 C
C
 1 a0001c0001t0001g0074
a0001c0001t0001g0074
 1 HG01071.hp1
HG01071.hp1
 intron_variant MODIFIER c.10+8425T>C
c.10+8425T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108100261
chrX:108100607 T
T
 G
G
 82 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(79): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 94 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(91): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.10+8771T>G
c.10+8771T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108100607
chrX:108100659 T
T
 A
A
 1 a0001c0001t0001g0192
a0001c0001t0001g0192
 1 HG02683.hp1
HG02683.hp1
 intron_variant MODIFIER c.10+8823T>A
c.10+8823T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108100659
chrX:108100824 T
T
 A
A
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.10+8988T>A
c.10+8988T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108100824
chrX:108101042 AT
AT
 A
A
 25 a0001c0001t0001g0073
a0001c0001t0001g0183
a0001c0001t0001g0193
others(22): Show 
a0001c0001t0001g0073
a0001c0001t0001g0183
a0001c0001t0001g0193
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
 27 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(24): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03579.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18974.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.10+9217delT
c.10+9217delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108101042
chrX:108101059 T
T
 G
G
 58 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(55): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 70 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(67): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.10+9223T>G
c.10+9223T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108101059
chrX:108101526 A
A
 G
G
 1 a0001c0001t0005g0163
a0001c0001t0005g0163
 1 HG02451.hp2
HG02451.hp2
 intron_variant MODIFIER c.10+9690A>G
c.10+9690A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108101526
chrX:108101690 A
A
 C
C
 1 a0001c0001t0001g0130
a0001c0001t0001g0130
 1 HG03239.hp1
HG03239.hp1
 intron_variant MODIFIER c.10+9854A>C
c.10+9854A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108101690
chrX:108102044 TC
TC
 T
T
 1 a0001c0002t0001g0148
a0001c0002t0001g0148
 1 NA19030.hp1
NA19030.hp1
 intron_variant MODIFIER c.10+10209delC
c.10+10209delC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108102044
chrX:108102073 T
T
 G
G
 17 a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
others(14): Show 
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0217
 23 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(20): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02698.hp1
HG03491.hp1
HG03492.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp2
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.10+10237T>G
c.10+10237T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108102073
chrX:108102416 A
A
 AT
AT
 10 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
others(7): Show 
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 10 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(7): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02723.hp2
HG02895.hp1
HG02897.hp2
HG02965.hp1
HG03041.hp1
NA19030.hp1
NA19043.hp1
 intron_variant MODIFIER c.10+10586dupT
c.10+10586dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108102416
chrX:108102549 A
A
 G
G
 1 a0001c0001t0001g0129
a0001c0001t0001g0129
 1 HG02683.hp2
HG02683.hp2
 intron_variant MODIFIER c.10+10713A>G
c.10+10713A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108102549
chrX:108102782 A
A
 AT
AT
 15 a0001c0001t0001g0014
a0001c0001t0001g0072
a0001c0001t0001g0152
others(12): Show 
a0001c0001t0001g0014
a0001c0001t0001g0072
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 16 HG01069.hp1
HG01071.hp2
HG02451.hp2
others(13): Show 
HG01069.hp1
HG01071.hp2
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03225.hp1
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.10+10957dupT
c.10+10957dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108102782
chrX:108102782 AT
AT
 A
A
 1 a0001c0001t0001g0075
a0001c0001t0001g0075
 1 HG01515.hp1
HG01515.hp1
 intron_variant MODIFIER c.10+10957delT
c.10+10957delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108102782
chrX:108102826 C
C
 CT
CT
 3 a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
 3 NA19060.hp1
NA19090.hp2
NA20300.hp2
NA19060.hp1
NA19090.hp2
NA20300.hp2
 intron_variant MODIFIER c.10+10999dupT
c.10+10999dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108102826
chrX:108102878 G
G
 T
T
 2 a0001c0001t0001g0013
a0001c0001t0001g0128
a0001c0001t0001g0013
a0001c0001t0001g0128
 3 NA18945.hp1
NA18966.hp1
NA19070.hp1
NA18945.hp1
NA18966.hp1
NA19070.hp1
 intron_variant MODIFIER c.10+11042G>T
c.10+11042G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108102878
chrX:108103172 C
C
 G
G
 2 a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0126
a0001c0001t0001g0127
 2 HG02622.hp2
HG03540.hp2
HG02622.hp2
HG03540.hp2
 intron_variant MODIFIER c.10+11336C>G
c.10+11336C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108103172
chrX:108104308 T
T
 C
C
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.10+12472T>C
c.10+12472T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108104308
chrX:108104434 G
G
 GT
GT
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.10+12610dupT
c.10+12610dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108104434
chrX:108104617 C
C
 G
G
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.10+12781C>G
c.10+12781C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108104617
chrX:108104925 G
G
 GT
GT
 58 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(55): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0071
a0001c0001t0001g0125
a0001c0001t0001g0162
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0190
a0001c0001t0003g0185
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 70 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(67): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02970.hp2
HG03098.hp1
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG06807.hp1
NA18522.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19085.hp1
NA19088.hp1
NA19090.hp1
NA20300.hp2
NA20805.hp1
 intron_variant MODIFIER c.10+13103dupT
c.10+13103dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108104925
chrX:108104925 G
G
 GTT
GTT
 4 a0001c0001t0001g0203
a0001c0001t0001g0218
a0001c0001t0002g0188
others(1): Show 
a0001c0001t0001g0203
a0001c0001t0001g0218
a0001c0001t0002g0188
a0001c0001t0002g0189
 4 HG02922.hp1
HG04228.hp1
NA18944.hp1
others(1): Show 
HG02922.hp1
HG04228.hp1
NA18944.hp1
NA20752.hp1
 intron_variant MODIFIER c.10+13102_10+13103d
others(4): Show 
c.10+13102_10+13103dupTT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108104925
chrX:108104925 GT
GT
 G
G
 4 a0001c0001t0001g0076
a0001c0001t0001g0165
a0001c0001t0001g0166
others(1): Show 
a0001c0001t0001g0076
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 4 HG02622.hp1
HG02738.hp1
HG03486.hp2
others(1): Show 
HG02622.hp1
HG02738.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.10+13103delT
c.10+13103delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108104925
chrX:108105019 T
T
 A
A
 1 a0001c0001t0003g0149
a0001c0001t0003g0149
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.10+13183T>A
c.10+13183T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108105019
chrX:108105299 T
T
 C
C
 4 a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0027
others(1): Show 
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0027
a0001c0001t0001g0028
 4 HG00558.hp2
HG00609.hp1
NA18948.hp1
others(1): Show 
HG00558.hp2
HG00609.hp1
NA18948.hp1
NA18995.hp1
 intron_variant MODIFIER c.10+13463T>C
c.10+13463T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108105299
chrX:108105762 G
G
 T
T
 1 a0001c0001t0001g0124
a0001c0001t0001g0124
 1 HG01981.hp1
HG01981.hp1
 intron_variant MODIFIER c.10+13926G>T
c.10+13926G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108105762
chrX:108106209 T
T
 C
C
 1 a0001c0001t0001g0194
a0001c0001t0001g0194
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.10+14373T>C
c.10+14373T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108106209
chrX:108107000 C
C
 T
T
 1 a0001c0001t0001g0076
a0001c0001t0001g0076
 1 HG02738.hp1
HG02738.hp1
 intron_variant MODIFIER c.10+15164C>T
c.10+15164C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108107000
chrX:108107116 C
C
 T
T
 1 a0001c0001t0001g0003
a0001c0001t0001g0003
 4 NA18962.hp1
NA18977.hp1
NA18994.hp1
others(1): Show 
NA18962.hp1
NA18977.hp1
NA18994.hp1
NA19010.hp2
 intron_variant MODIFIER c.10+15280C>T
c.10+15280C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108107116
chrX:108107813 C
C
 A
A
 1 a0001c0001t0001g0077
a0001c0001t0001g0077
 1 NA18612.hp1
NA18612.hp1
 intron_variant MODIFIER c.10+15977C>A
c.10+15977C>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108107813
chrX:108107874 C
C
 T
T
 1 a0001c0001t0001g0123
a0001c0001t0001g0123
 1 HG02074.hp1
HG02074.hp1
 intron_variant MODIFIER c.10+16038C>T
c.10+16038C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108107874
chrX:108108159 C
C
 CT
CT
 135 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(132): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0028
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0086
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0095
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0004t0001g0021
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 160 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(157): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00423.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00733.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01358.hp1
HG01515.hp1
HG01516.hp1
HG01517.hp1
HG01517.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp1
HG02074.hp1
HG02083.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02602.hp1
HG02622.hp2
HG02630.hp2
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02738.hp1
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp1
HG02922.hp2
HG02970.hp1
HG02970.hp2
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03486.hp1
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp2
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp2
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
HG06807.hp2
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18945.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18966.hp1
NA18970.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18999.hp1
NA18999.hp2
NA19003.hp1
NA19004.hp1
NA19009.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp2
NA19043.hp1
NA19055.hp1
NA19062.hp1
NA19065.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19076.hp1
NA19077.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.10+16343dupT
c.10+16343dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108108159
chrX:108108159 C
C
 CTT
CTT
 31 a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
others(28): Show 
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 33 HG00558.hp1
HG01106.hp1
HG01109.hp1
others(30): Show 
HG00558.hp1
HG01106.hp1
HG01109.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02080.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02723.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG03041.hp1
HG03471.hp1
HG03579.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
NA20129.hp1
NA20905.hp1
 intron_variant MODIFIER c.10+16342_10+16343d
others(4): Show 
c.10+16342_10+16343dupTT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108108159
chrX:108108159 C
C
 CTTT
CTTT
 3 a0001c0001t0001g0122
a0001c0001t0001g0168
a0001c0001t0002g0187
a0001c0001t0001g0122
a0001c0001t0001g0168
a0001c0001t0002g0187
 3 HG01361.hp2
HG01934.hp1
HG02080.hp2
HG01361.hp2
HG01934.hp1
HG02080.hp2
 intron_variant MODIFIER c.10+16341_10+16343d
others(5): Show 
c.10+16341_10+16343dupTTT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108108159
chrX:108108159 CT
CT
 C
C
 1 a0001c0001t0001g0029
a0001c0001t0001g0029
 1 NA18965.hp1
NA18965.hp1
 intron_variant MODIFIER c.10+16343delT
c.10+16343delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108108159
chrX:108108286 G
G
 C
C
 2 a0001c0001t0001g0030
a0001c0001t0001g0072
a0001c0001t0001g0030
a0001c0001t0001g0072
 2 HG02647.hp1
HG03225.hp1
HG02647.hp1
HG03225.hp1
 intron_variant MODIFIER c.10+16450G>C
c.10+16450G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108108286
chrX:108108600 T
T
 A
A
 1 a0002c0003t0001g0204
a0002c0003t0001g0204
 1 HG03209.hp1
HG03209.hp1
 intron_variant MODIFIER c.10+16764T>A
c.10+16764T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108108600
chrX:108109269 G
G
 C
C
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.11-16808G>C
c.11-16808G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108109269
chrX:108109650 G
G
 A
A
 23 a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
others(20): Show 
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
 25 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(22): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03579.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.11-16427G>A
c.11-16427G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108109650
chrX:108109775 A
A
 C
C
 1 a0001c0001t0002g0187
a0001c0001t0002g0187
 1 HG01361.hp2
HG01361.hp2
 intron_variant MODIFIER c.11-16302A>C
c.11-16302A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108109775
chrX:108109786 A
A
 T
T
 1 a0001c0001t0001g0068
a0001c0001t0001g0068
 1 HG02129.hp1
HG02129.hp1
 intron_variant MODIFIER c.11-16291A>T
c.11-16291A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108109786
chrX:108109851 C
C
 G
G
 1 a0001c0001t0001g0022
a0001c0001t0001g0022
 1 NA18970.hp1
NA18970.hp1
 intron_variant MODIFIER c.11-16226C>G
c.11-16226C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108109851
chrX:108110137 A
A
 G
G
 82 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(79): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 94 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(91): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.11-15940A>G
c.11-15940A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108110137
chrX:108110201 C
C
 CA
CA
 56 a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
others(53): Show 
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0023
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0027
a0001c0001t0001g0030
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0044
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0170
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0004g0052
a0002c0003t0001g0204
 59 HG00099.hp1
HG00323.hp2
HG00558.hp2
others(56): Show 
HG00099.hp1
HG00323.hp2
HG00558.hp2
HG00609.hp1
HG00642.hp1
HG00673.hp1
HG01074.hp1
HG01081.hp1
HG01099.hp1
HG01175.hp2
HG01257.hp2
HG01258.hp1
HG01361.hp1
HG01433.hp1
HG01516.hp2
HG01978.hp2
HG01981.hp2
HG02027.hp1
HG02071.hp1
HG02129.hp1
HG02257.hp2
HG02630.hp1
HG02647.hp1
HG02723.hp2
HG02735.hp1
HG02809.hp1
HG02818.hp2
HG03017.hp1
HG03041.hp1
HG03195.hp1
HG03209.hp1
HG03225.hp1
HG03490.hp1
HG03710.hp1
HG03831.hp1
HG03831.hp2
HG04184.hp2
HG04228.hp1
NA18948.hp1
NA18955.hp1
NA18971.hp1
NA18974.hp1
NA18982.hp1
NA18983.hp1
NA18985.hp1
NA18999.hp1
NA18999.hp2
NA19000.hp1
NA19006.hp1
NA19058.hp1
NA19060.hp1
NA19065.hp2
NA19067.hp1
NA19072.hp1
NA19090.hp2
NA19091.hp1
NA20129.hp2
NA20300.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.11-15857dupA
c.11-15857dupA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108110201
chrX:108110201 C
C
 CAA
CAA
 4 a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0031
others(1): Show 
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0136
 4 HG03942.hp1
NA18965.hp1
NA18995.hp1
others(1): Show 
HG03942.hp1
NA18965.hp1
NA18995.hp1
NA19005.hp1
 intron_variant MODIFIER c.11-15858_11-15857d
others(4): Show 
c.11-15858_11-15857dupAA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108110201
chrX:108110201 CA
CA
 C
C
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.11-15857delA
c.11-15857delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108110201
chrX:108110305 G
G
 A
A
 1 a0001c0001t0001g0024
a0001c0001t0001g0024
 1 HG04184.hp1
HG04184.hp1
 intron_variant MODIFIER c.11-15772G>A
c.11-15772G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108110305
chrX:108110372 GA
GA
 G
G
 2 a0001c0001t0001g0061
a0001c0001t0001g0193
a0001c0001t0001g0061
a0001c0001t0001g0193
 2 HG01243.hp1
HG02818.hp2
HG01243.hp1
HG02818.hp2
 intron_variant MODIFIER c.11-15692delA
c.11-15692delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108110372
chrX:108110426 CT
CT
 C
C
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 HG01952.hp1
HG01952.hp1
 intron_variant MODIFIER c.11-15650delT
c.11-15650delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108110426
chrX:108110428 GA
GA
 G
G
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.11-15646delA
c.11-15646delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108110428
chrX:108110437 A
A
 G
G
 3 a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
 3 HG02922.hp2
HG03130.hp1
HG03195.hp2
HG02922.hp2
HG03130.hp1
HG03195.hp2
 intron_variant MODIFIER c.11-15640A>G
c.11-15640A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108110437
chrX:108110440 A
A
 AT
AT
 1 a0001c0001t0001g0118
a0001c0001t0001g0118
 1 NA21309.hp2
NA21309.hp2
 intron_variant MODIFIER c.11-15629dupT
c.11-15629dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108110440
chrX:108110506 T
T
 C
C
 2 a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0150
a0001c0001t0003g0151
 2 HG02723.hp2
HG03041.hp1
HG02723.hp2
HG03041.hp1
 intron_variant MODIFIER c.11-15571T>C
c.11-15571T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108110506
chrX:108110924 G
G
 A
A
 1 a0001c0001t0001g0153
a0001c0001t0001g0153
 1 HG02818.hp1
HG02818.hp1
 intron_variant MODIFIER c.11-15153G>A
c.11-15153G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108110924
chrX:108111013 C
C
 T
T
 1 a0001c0001t0001g0060
a0001c0001t0001g0060
 1 HG03017.hp1
HG03017.hp1
 intron_variant MODIFIER c.11-15064C>T
c.11-15064C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108111013
chrX:108111131 TG
TG
 T
T
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.11-14943delG
c.11-14943delG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108111131
chrX:108111552 G
G
 C
C
 85 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(82): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 97 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(94): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.11-14525G>C
c.11-14525G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108111552
chrX:108111994 A
A
 T
T
 1 a0001c0001t0001g0117
a0001c0001t0001g0117
 1 HG00621.hp1
HG00621.hp1
 intron_variant MODIFIER c.11-14083A>T
c.11-14083A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108111994
chrX:108112056 G
G
 A
A
 1 a0001c0001t0001g0081
a0001c0001t0001g0081
 1 NA19012.hp1
NA19012.hp1
 intron_variant MODIFIER c.11-14021G>A
c.11-14021G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108112056
chrX:108112432 C
C
 T
T
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.11-13645C>T
c.11-13645C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108112432
chrX:108112560 T
T
 A
A
 3 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
 3 HG02723.hp2
HG03041.hp1
NA19043.hp1
HG02723.hp2
HG03041.hp1
NA19043.hp1
 intron_variant MODIFIER c.11-13517T>A
c.11-13517T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108112560
chrX:108112613 T
T
 C
C
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.11-13464T>C
c.11-13464T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108112613
chrX:108112686 C
C
 T
T
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.11-13391C>T
c.11-13391C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108112686
chrX:108112904 A
A
 AT
AT
 1 a0001c0001t0001g0158
a0001c0001t0001g0158
 1 HG02717.hp1
HG02717.hp1
 intron_variant MODIFIER c.11-13164dupT
c.11-13164dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108112904
chrX:108112904 AT
AT
 A
A
 2 a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0082
a0001c0001t0001g0083
 2 HG02280.hp2
HG02897.hp1
HG02280.hp2
HG02897.hp1
 intron_variant MODIFIER c.11-13164delT
c.11-13164delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108112904
chrX:108113022 T
T
 C
C
 23 a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
others(20): Show 
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
 25 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(22): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03579.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.11-13055T>C
c.11-13055T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108113022
chrX:108113117 T
T
 C
C
 1 a0001c0001t0001g0195
a0001c0001t0001g0195
 1 NA20805.hp1
NA20805.hp1
 intron_variant MODIFIER c.11-12960T>C
c.11-12960T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108113117
chrX:108113169 CA
CA
 C
C
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.11-12903delA
c.11-12903delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108113169
chrX:108113239 A
A
 T
T
 1 a0001c0001t0001g0216
a0001c0001t0001g0216
 1 HG02257.hp1
HG02257.hp1
 intron_variant MODIFIER c.11-12838A>T
c.11-12838A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108113239
chrX:108113247 C
C
 T
T
 3 a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0003g0185
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0003g0185
 3 HG02486.hp1
HG03579.hp1
HG06807.hp1
HG02486.hp1
HG03579.hp1
HG06807.hp1
 intron_variant MODIFIER c.11-12830C>T
c.11-12830C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108113247
chrX:108113329 T
T
 C
C
 1 a0001c0001t0001g0216
a0001c0001t0001g0216
 1 HG02257.hp1
HG02257.hp1
 intron_variant MODIFIER c.11-12748T>C
c.11-12748T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108113329
chrX:108113601 C
C
 G
G
 1 a0001c0001t0001g0079
a0001c0001t0001g0079
 1 NA18999.hp2
NA18999.hp2
 intron_variant MODIFIER c.11-12476C>G
c.11-12476C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108113601
chrX:108114233 C
C
 T
T
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.11-11844C>T
c.11-11844C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108114233
chrX:108114234 G
G
 A
A
 67 a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0010
others(64): Show 
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0067
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0086
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0095
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0004t0001g0021
 79 HG00423.hp2
HG00621.hp1
HG00733.hp1
others(76): Show 
HG00423.hp2
HG00621.hp1
HG00733.hp1
HG01069.hp1
HG01071.hp2
HG01123.hp1
HG01169.hp2
HG01256.hp1
HG01261.hp1
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG02015.hp1
HG02040.hp1
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02145.hp1
HG02280.hp2
HG02300.hp1
HG02559.hp2
HG02602.hp1
HG02683.hp2
HG02738.hp1
HG02897.hp1
HG02970.hp1
HG03041.hp2
HG03139.hp1
HG03516.hp1
HG03654.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18945.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18966.hp1
NA18970.hp1
NA18975.hp1
NA18977.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18999.hp2
NA19003.hp1
NA19004.hp1
NA19009.hp1
NA19010.hp2
NA19012.hp1
NA19055.hp1
NA19062.hp1
NA19065.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19076.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19089.hp1
NA20129.hp1
NA20905.hp1
NA21309.hp2
 intron_variant MODIFIER c.11-11843G>A
c.11-11843G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108114234
chrX:108114321 T
T
 A
A
 34 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(31): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 44 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(41): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02056.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02809.hp2
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp2
HG04228.hp1
NA19082.hp1
NA19088.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.11-11756T>A
c.11-11756T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108114321
chrX:108114787 TA
TA
 T
T
 57 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(54): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 69 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(66): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.11-11288delA
c.11-11288delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108114787
chrX:108114871 T
T
 C
C
 1 a0001c0001t0001g0084
a0001c0001t0001g0084
 1 HG04199.hp1
HG04199.hp1
 intron_variant MODIFIER c.11-11206T>C
c.11-11206T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108114871
chrX:108115066 C
C
 T
T
 7 a0001c0001t0001g0004
a0001c0001t0001g0012
a0001c0001t0001g0075
others(4): Show 
a0001c0001t0001g0004
a0001c0001t0001g0012
a0001c0001t0001g0075
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0130
 10 HG01192.hp1
HG01255.hp1
HG01358.hp1
others(7): Show 
HG01192.hp1
HG01255.hp1
HG01358.hp1
HG01515.hp1
HG01517.hp2
HG03239.hp1
HG03239.hp2
HG03491.hp2
HG03669.hp1
HG04204.hp1
 intron_variant MODIFIER c.11-11011C>T
c.11-11011C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115066
chrX:108115115 A
A
 G
G
 10 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
others(7): Show 
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 10 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(7): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02723.hp2
HG02895.hp1
HG02897.hp2
HG02965.hp1
HG03041.hp1
NA19030.hp1
NA19043.hp1
 intron_variant MODIFIER c.11-10962A>G
c.11-10962A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115115
chrX:108115118 C
C
 CATGTGTG
others(7): Show 
CATGTGTGCATGTAT
 2 a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0150
a0001c0001t0003g0151
 2 HG02723.hp2
HG03041.hp1
HG02723.hp2
HG03041.hp1
 intron_variant MODIFIER c.11-10959_11-10958i
others(16): Show 
c.11-10959_11-10958insATGTGTGCATGTAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115118
chrX:108115118 C
C
 CATGTGTG
others(11): Show 
CATGTGTGCATGTATGCGT
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.11-10959_11-10958i
others(20): Show 
c.11-10959_11-10958insATGTGTGCATGTATGCGT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115118
chrX:108115118 C
C
 CGT
CGT
 29 a0001c0001t0001g0003
a0001c0001t0001g0011
a0001c0001t0001g0104
others(26): Show 
a0001c0001t0001g0003
a0001c0001t0001g0011
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0117
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0138
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0183
a0001c0001t0001g0195
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0189
a0001c0001t0003g0185
a0001c0005t0001g0219
a0002c0003t0001g0213
a0002c0003t0001g0214
 33 HG00423.hp2
HG00621.hp1
HG00733.hp1
others(30): Show 
HG00423.hp2
HG00621.hp1
HG00733.hp1
HG01109.hp1
HG01123.hp1
HG02055.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02486.hp1
HG02622.hp1
HG02630.hp2
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03486.hp2
HG03540.hp1
HG03579.hp1
HG03654.hp1
HG06807.hp1
NA18522.hp1
NA18940.hp1
NA18952.hp1
NA18953.hp1
NA18962.hp1
NA18975.hp1
NA18977.hp1
NA18994.hp1
NA19010.hp2
NA19066.hp1
NA19068.hp1
NA19079.hp1
NA20805.hp1
 intron_variant MODIFIER c.11-10926_11-10925d
others(4): Show 
c.11-10926_11-10925dupGT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108115118
chrX:108115118 C
C
 CGTGT
CGTGT
 2 a0001c0001t0001g0059
a0001c0001t0001g0215
a0001c0001t0001g0059
a0001c0001t0001g0215
 2 HG02132.hp1
HG03195.hp1
HG02132.hp1
HG03195.hp1
 intron_variant MODIFIER c.11-10928_11-10925d
others(6): Show 
c.11-10928_11-10925dupGTGT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108115118
chrX:108115118 CGT
CGT
 C
C
 16 a0001c0001t0001g0032
a0001c0001t0001g0063
a0001c0001t0001g0152
others(13): Show 
a0001c0001t0001g0032
a0001c0001t0001g0063
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0193
a0001c0001t0002g0190
a0001c0001t0005g0163
 16 HG01081.hp2
HG01243.hp1
HG02257.hp2
others(13): Show 
HG01081.hp2
HG01243.hp1
HG02257.hp2
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.11-10926_11-10925d
others(4): Show 
c.11-10926_11-10925delGT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108115118
chrX:108115118 CGTGT
CGTGT
 C
C
 1 a0001c0001t0001g0154
a0001c0001t0001g0154
 1 NA19030.hp2
NA19030.hp2
 intron_variant MODIFIER c.11-10928_11-10925d
others(6): Show 
c.11-10928_11-10925delGTGT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108115118
chrX:108115119 G
G
 A
A
 1 a0001c0001t0003g0149
a0001c0001t0003g0149
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.11-10958G>A
c.11-10958G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115119
chrX:108115120 T
T
 C
C
 2 a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0150
a0001c0001t0003g0151
 2 HG02723.hp2
HG03041.hp1
HG02723.hp2
HG03041.hp1
 intron_variant MODIFIER c.11-10957T>C
c.11-10957T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115120
chrX:108115124 T
T
 TGCATGTA
others(3): Show 
TGCATGTATGC
 1 a0001c0001t0003g0149
a0001c0001t0003g0149
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.11-10952_11-10951i
others(12): Show 
c.11-10952_11-10951insCATGTATGCG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108115124
chrX:108115349 G
G
 A
A
 1 a0001c0001t0001g0033
a0001c0001t0001g0033
 1 HG00099.hp1
HG00099.hp1
 intron_variant MODIFIER c.11-10728G>A
c.11-10728G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115349
chrX:108115395 T
T
 C
C
 1 a0001c0001t0001g0218
a0001c0001t0001g0218
 1 HG04228.hp1
HG04228.hp1
 intron_variant MODIFIER c.11-10682T>C
c.11-10682T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115395
chrX:108115623 T
T
 A
A
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.11-10454T>A
c.11-10454T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108115623
chrX:108116422 GT
GT
 G
G
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-9652delT
c.11-9652delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108116422
chrX:108116485 G
G
 A
A
 85 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(82): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 97 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(94): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.11-9592G>A
c.11-9592G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108116485
chrX:108116512 A
A
 C
C
 2 a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0108
a0001c0001t0001g0109
 2 HG00733.hp1
HG01123.hp1
HG00733.hp1
HG01123.hp1
 intron_variant MODIFIER c.11-9565A>C
c.11-9565A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108116512
chrX:108116529 G
G
 GT
GT
 2 a0001c0001t0001g0013
a0001c0001t0001g0128
a0001c0001t0001g0013
a0001c0001t0001g0128
 3 NA18945.hp1
NA18966.hp1
NA19070.hp1
NA18945.hp1
NA18966.hp1
NA19070.hp1
 intron_variant MODIFIER c.11-9540dupT
c.11-9540dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108116529
chrX:108116737 G
G
 GCTC
GCTC
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-9338_11-9336dup
others(3): Show 
c.11-9338_11-9336dupTCC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108116737
chrX:108116834 T
T
 C
C
 85 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(82): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 97 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(94): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.11-9243T>C
c.11-9243T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108116834
chrX:108116861 AT
AT
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-9213delT
c.11-9213delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108116861
chrX:108116878 T
T
 G
G
 1 a0001c0001t0002g0184
a0001c0001t0002g0184
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.11-9199T>G
c.11-9199T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108116878
chrX:108116954 C
C
 T
T
 4 a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
others(1): Show 
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0124
 4 HG01928.hp1
HG01943.hp1
HG01975.hp1
others(1): Show 
HG01928.hp1
HG01943.hp1
HG01975.hp1
HG01981.hp1
 intron_variant MODIFIER c.11-9123C>T
c.11-9123C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108116954
chrX:108117163 C
C
 CT
CT
 24 a0001c0001t0001g0168
a0001c0001t0001g0183
a0001c0001t0002g0017
others(21): Show 
a0001c0001t0001g0168
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
 26 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(23): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02080.hp2
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03579.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.11-8903dupT
c.11-8903dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108117163
chrX:108117358 T
T
 C
C
 58 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(55): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 70 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(67): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.11-8719T>C
c.11-8719T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108117358
chrX:108117743 TG
TG
 T
T
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-8332delG
c.11-8332delG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108117743
chrX:108117839 CT
CT
 C
C
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-8234delT
c.11-8234delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108117839
chrX:108118101 GT
GT
 G
G
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-7973delT
c.11-7973delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108118101
chrX:108118132 A
A
 G
G
 2 a0001c0001t0001g0100
a0001c0001t0001g0135
a0001c0001t0001g0100
a0001c0001t0001g0135
 2 NA19055.hp1
NA19062.hp1
NA19055.hp1
NA19062.hp1
 intron_variant MODIFIER c.11-7945A>G
c.11-7945A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108118132
chrX:108118186 T
T
 A
A
 23 a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
others(20): Show 
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
 25 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(22): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03579.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.11-7891T>A
c.11-7891T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108118186
chrX:108118244 C
C
 T
T
 1 a0001c0001t0001g0134
a0001c0001t0001g0134
 1 NA18975.hp1
NA18975.hp1
 intron_variant MODIFIER c.11-7833C>T
c.11-7833C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108118244
chrX:108118314 C
C
 T
T
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.11-7763C>T
c.11-7763C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108118314
chrX:108118342 A
A
 T
T
 1 a0001c0001t0001g0077
a0001c0001t0001g0077
 1 NA18612.hp1
NA18612.hp1
 intron_variant MODIFIER c.11-7735A>T
c.11-7735A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108118342
chrX:108118359 TG
TG
 T
T
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-7715delG
c.11-7715delG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108118359
chrX:108118362 G
G
 A
A
 23 a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
others(20): Show 
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
 25 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(22): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03579.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.11-7715G>A
c.11-7715G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108118362
chrX:108118516 AG
AG
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-7557delG
c.11-7557delG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108118516
chrX:108118712 T
T
 C
C
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.11-7365T>C
c.11-7365T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108118712
chrX:108118991 G
G
 C
C
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.11-7086G>C
c.11-7086G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108118991
chrX:108119111 G
G
 A
A
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG04184.hp2
HG04184.hp2
 intron_variant MODIFIER c.11-6966G>A
c.11-6966G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108119111
chrX:108119146 G
G
 A
A
 1 a0001c0001t0001g0036
a0001c0001t0001g0036
 1 NA19000.hp1
NA19000.hp1
 intron_variant MODIFIER c.11-6931G>A
c.11-6931G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108119146
chrX:108119160 TA
TA
 T
T
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-6911delA
c.11-6911delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108119160
chrX:108119244 AC
AC
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-6831delC
c.11-6831delC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108119244
chrX:108119380 G
G
 A
A
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.11-6697G>A
c.11-6697G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108119380
chrX:108119635 T
T
 C
C
 23 a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
others(20): Show 
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0185
 25 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(22): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03579.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.11-6442T>C
c.11-6442T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108119635
chrX:108119685 A
A
 AG
AG
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-6389dupG
c.11-6389dupG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108119685
chrX:108119844 A
A
 AT
AT
 1 a0001c0001t0001g0073
a0001c0001t0001g0073
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.11-6229dupT
c.11-6229dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108119844
chrX:108120058 AG
AG
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-6017delG
c.11-6017delG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108120058
chrX:108120087 A
A
 C
C
 1 a0001c0001t0002g0178
a0001c0001t0002g0178
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.11-5990A>C
c.11-5990A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108120087
chrX:108120103 C
C
 G
G
 34 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(31): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 44 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(41): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02056.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02809.hp2
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp2
HG04228.hp1
NA19082.hp1
NA19088.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.11-5974C>G
c.11-5974C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108120103
chrX:108120108 C
C
 T
T
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.11-5969C>T
c.11-5969C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108120108
chrX:108120355 A
A
 G
G
 2 a0001c0001t0001g0099
a0001c0001t0001g0123
a0001c0001t0001g0099
a0001c0001t0001g0123
 2 HG02074.hp1
NA19083.hp1
HG02074.hp1
NA19083.hp1
 intron_variant MODIFIER c.11-5722A>G
c.11-5722A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108120355
chrX:108120595 AT
AT
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-5479delT
c.11-5479delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108120595
chrX:108120660 A
A
 AT
AT
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-5413dupT
c.11-5413dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108120660
chrX:108120694 A
A
 AT
AT
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-5378dupT
c.11-5378dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108120694
chrX:108120886 T
T
 C
C
 1 a0001c0001t0001g0014
a0001c0001t0001g0014
 2 HG01069.hp1
HG01071.hp2
HG01069.hp1
HG01071.hp2
 intron_variant MODIFIER c.11-5191T>C
c.11-5191T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108120886
chrX:108120894 A
A
 G
G
 1 a0001c0001t0001g0202
a0001c0001t0001g0202
 1 HG01257.hp1
HG01257.hp1
 intron_variant MODIFIER c.11-5183A>G
c.11-5183A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108120894
chrX:108120926 T
T
 C
C
 7 a0001c0001t0001g0019
a0001c0001t0001g0169
a0001c0001t0001g0196
others(4): Show 
a0001c0001t0001g0019
a0001c0001t0001g0169
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0202
a0001c0001t0001g0203
 8 HG00099.hp2
HG00733.hp2
HG00741.hp1
others(5): Show 
HG00099.hp2
HG00733.hp2
HG00741.hp1
HG01175.hp1
HG01257.hp1
HG02698.hp1
HG03669.hp2
NA20752.hp1
 intron_variant MODIFIER c.11-5151T>C
c.11-5151T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108120926
chrX:108120980 CA
CA
 C
C
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-5095delA
c.11-5095delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108120980
chrX:108121139 G
G
 T
T
 2 a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0211
a0001c0001t0001g0212
 2 HG03486.hp1
HG03516.hp2
HG03486.hp1
HG03516.hp2
 intron_variant MODIFIER c.11-4938G>T
c.11-4938G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108121139
chrX:108121938 AT
AT
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-4136delT
c.11-4136delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108121938
chrX:108122015 TA
TA
 T
T
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-4060delA
c.11-4060delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108122015
chrX:108122039 AC
AC
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-4034delC
c.11-4034delC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108122039
chrX:108122193 AT
AT
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-3881delT
c.11-3881delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108122193
chrX:108122353 T
T
 C
C
 2 a0001c0001t0001g0016
a0001c0001t0001g0139
a0001c0001t0001g0016
a0001c0001t0001g0139
 3 HG02145.hp1
HG02559.hp2
HG02970.hp1
HG02145.hp1
HG02559.hp2
HG02970.hp1
 intron_variant MODIFIER c.11-3724T>C
c.11-3724T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108122353
chrX:108122505 TC
TC
 T
T
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-3569delC
c.11-3569delC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108122505
chrX:108122928 A
A
 G
G
 3 a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0066
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0066
 3 NA18955.hp1
NA18971.hp1
NA18999.hp1
NA18955.hp1
NA18971.hp1
NA18999.hp1
 intron_variant MODIFIER c.11-3149A>G
c.11-3149A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108122928
chrX:108123440 TC
TC
 T
T
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-2634delC
c.11-2634delC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108123440
chrX:108123519 C
C
 CT
CT
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-2556dupT
c.11-2556dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108123519
chrX:108123622 T
T
 C
C
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.11-2455T>C
c.11-2455T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108123622
chrX:108123923 C
C
 T
T
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG04184.hp2
HG04184.hp2
 intron_variant MODIFIER c.11-2154C>T
c.11-2154C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108123923
chrX:108124062 A
A
 AT
AT
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-2012dupT
c.11-2012dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108124062
chrX:108124386 TG
TG
 T
T
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.11-1689delG
c.11-1689delG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108124386
chrX:108124566 T
T
 C
C
 1 a0001c0001t0001g0085
a0001c0001t0001g0085
 1 NA18943.hp1
NA18943.hp1
 intron_variant MODIFIER c.11-1511T>C
c.11-1511T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108124566
chrX:108124755 A
A
 AT
AT
 2 a0001c0001t0001g0116
a0001c0001t0003g0149
a0001c0001t0001g0116
a0001c0001t0003g0149
 2 HG01192.hp1
NA19043.hp1
HG01192.hp1
NA19043.hp1
 intron_variant MODIFIER c.11-1312dupT
c.11-1312dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108124755
chrX:108124755 AT
AT
 A
A
 4 a0001c0001t0001g0013
a0001c0001t0001g0022
a0001c0001t0001g0128
others(1): Show 
a0001c0001t0001g0013
a0001c0001t0001g0022
a0001c0001t0001g0128
a0001c0001t0001g0165
 5 HG03540.hp1
NA18945.hp1
NA18966.hp1
others(2): Show 
HG03540.hp1
NA18945.hp1
NA18966.hp1
NA18970.hp1
NA19070.hp1
 intron_variant MODIFIER c.11-1312delT
c.11-1312delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108124755
chrX:108124781 T
T
 G
G
 5 a0001c0001t0001g0193
a0002c0003t0001g0204
a0002c0003t0001g0205
others(2): Show 
a0001c0001t0001g0193
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 5 HG01243.hp1
HG02109.hp2
HG02280.hp1
others(2): Show 
HG01243.hp1
HG02109.hp2
HG02280.hp1
HG02630.hp2
HG03209.hp1
 intron_variant MODIFIER c.11-1296T>G
c.11-1296T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108124781
chrX:108124961 GC
GC
 G
G
 1 a0001c0001t0001g0026
a0001c0001t0001g0026
 1 NA18948.hp1
NA18948.hp1
 intron_variant MODIFIER c.11-1111delC
c.11-1111delC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 108124961
chrX:108124981 G
G
 A
A
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.11-1096G>A
c.11-1096G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108124981
chrX:108125058 T
T
 A
A
 1 a0001c0001t0001g0126
a0001c0001t0001g0126
 1 HG03540.hp2
HG03540.hp2
 intron_variant MODIFIER c.11-1019T>A
c.11-1019T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108125058
chrX:108125770 T
T
 C
C
 1 a0001c0001t0001g0158
a0001c0001t0001g0158
 1 HG02717.hp1
HG02717.hp1
 intron_variant MODIFIER c.11-307T>C
c.11-307T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 1/12 chrX 108125770
chrX:108126225 G
G
 C
C
 1 a0001c0001t0001g0206
a0001c0001t0001g0206
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.121+38G>C
c.121+38G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108126225
chrX:108126511 G
G
 A
A
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.121+324G>A
c.121+324G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108126511
chrX:108126881 T
T
 A
A
 1 a0001c0001t0001g0110
a0001c0001t0001g0110
 1 NA19240.hp2
NA19240.hp2
 intron_variant MODIFIER c.121+694T>A
c.121+694T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108126881
chrX:108126889 T
T
 G
G
 1 a0001c0001t0001g0086
a0001c0001t0001g0086
 1 NA18961.hp1
NA18961.hp1
 intron_variant MODIFIER c.121+702T>G
c.121+702T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108126889
chrX:108127470 C
C
 T
T
 1 a0001c0001t0001g0098
a0001c0001t0001g0098
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.121+1283C>T
c.121+1283C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108127470
chrX:108127480 C
C
 T
T
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.121+1293C>T
c.121+1293C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108127480
chrX:108127671 G
G
 A
A
 1 a0001c0001t0001g0134
a0001c0001t0001g0134
 1 NA18975.hp1
NA18975.hp1
 intron_variant MODIFIER c.122-1110G>A
c.122-1110G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108127671
chrX:108127733 G
G
 C
C
 1 a0001c0001t0001g0023
a0001c0001t0001g0023
 1 HG00323.hp2
HG00323.hp2
 intron_variant MODIFIER c.122-1048G>C
c.122-1048G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108127733
chrX:108128204 C
C
 T
T
 1 a0001c0001t0001g0097
a0001c0001t0001g0097
 1 HG02015.hp1
HG02015.hp1
 intron_variant MODIFIER c.122-577C>T
c.122-577C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108128204
chrX:108128215 G
G
 A
A
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG04184.hp2
HG04184.hp2
 intron_variant MODIFIER c.122-566G>A
c.122-566G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108128215
chrX:108128303 G
G
 C
C
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.122-478G>C
c.122-478G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108128303
chrX:108128368 C
C
 T
T
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.122-413C>T
c.122-413C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 chrX 108128368
chrX:108128674 TA
TA
 T
T
 56 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(53): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 68 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(65): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.122-105delA
c.122-105delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 2/12 INFO_REALIGN_3_PRIME chrX 108128674
chrX:108128870 T
T
 G
G
 1 a0001c0001t0001g0086
a0001c0001t0001g0086
 1 NA18961.hp1
NA18961.hp1
 intron_variant MODIFIER c.193+18T>G
c.193+18T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108128870
chrX:108128887 C
C
 T
T
 1 a0001c0001t0001g0210
a0001c0001t0001g0210
 1 HG02451.hp1
HG02451.hp1
 intron_variant MODIFIER c.193+35C>T
c.193+35C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108128887
chrX:108128903 C
C
 T
T
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.193+51C>T
c.193+51C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108128903
chrX:108129046 T
T
 C
C
 1 a0001c0001t0001g0154
a0001c0001t0001g0154
 1 NA19030.hp2
NA19030.hp2
 intron_variant MODIFIER c.193+194T>C
c.193+194T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108129046
chrX:108129142 C
C
 T
T
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.193+290C>T
c.193+290C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108129142
chrX:108129569 C
C
 CT
CT
 3 a0001c0001t0001g0086
a0001c0001t0001g0096
a0001c0001t0001g0117
a0001c0001t0001g0086
a0001c0001t0001g0096
a0001c0001t0001g0117
 3 HG00621.hp1
HG04115.hp1
NA18961.hp1
HG00621.hp1
HG04115.hp1
NA18961.hp1
 intron_variant MODIFIER c.193+736dupT
c.193+736dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 INFO_REALIGN_3_PRIME chrX 108129569
chrX:108129569 CT
CT
 C
C
 5 a0001c0001t0001g0087
a0001c0001t0001g0098
a0001c0001t0001g0155
others(2): Show 
a0001c0001t0001g0087
a0001c0001t0001g0098
a0001c0001t0001g0155
a0001c0001t0001g0199
a0001c0001t0002g0189
 5 HG01256.hp1
HG02922.hp1
HG03491.hp1
others(2): Show 
HG01256.hp1
HG02922.hp1
HG03491.hp1
NA18959.hp1
NA20300.hp1
 intron_variant MODIFIER c.193+736delT
c.193+736delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 INFO_REALIGN_3_PRIME chrX 108129569
chrX:108129620 C
C
 G
G
 213 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(210): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0027
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0044
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0086
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0095
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0136
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0004g0052
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0004t0001g0021
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 241 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(238): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00423.hp2
HG00558.hp1
HG00558.hp2
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01358.hp1
HG01361.hp1
HG01361.hp2
HG01515.hp1
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02602.hp1
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03710.hp1
HG03831.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18975.hp1
NA18975.hp2
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18999.hp1
NA18999.hp2
NA19000.hp1
NA19003.hp1
NA19003.hp2
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp1
NA20129.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.193+768C>G
c.193+768C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108129620
chrX:108129696 G
G
 C
C
 1 a0001c0001t0001g0085
a0001c0001t0001g0085
 1 NA18943.hp1
NA18943.hp1
 intron_variant MODIFIER c.193+844G>C
c.193+844G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108129696
chrX:108129715 C
C
 T
T
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.193+863C>T
c.193+863C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108129715
chrX:108129716 G
G
 T
T
 1 a0001c0001t0001g0115
a0001c0001t0001g0115
 1 HG03239.hp2
HG03239.hp2
 intron_variant MODIFIER c.193+864G>T
c.193+864G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108129716
chrX:108129791 C
C
 T
T
 1 a0001c0001t0001g0212
a0001c0001t0001g0212
 1 HG03516.hp2
HG03516.hp2
 intron_variant MODIFIER c.193+939C>T
c.193+939C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108129791
chrX:108129870 C
C
 CT
CT
 4 a0001c0001t0001g0056
a0001c0001t0001g0070
a0001c0001t0001g0096
others(1): Show 
a0001c0001t0001g0056
a0001c0001t0001g0070
a0001c0001t0001g0096
a0001c0001t0001g0164
 4 HG04115.hp1
HG06807.hp2
NA19090.hp2
others(1): Show 
HG04115.hp1
HG06807.hp2
NA19090.hp2
NA19091.hp1
 intron_variant MODIFIER c.193+1037dupT
c.193+1037dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 INFO_REALIGN_3_PRIME chrX 108129870
chrX:108129870 CT
CT
 C
C
 27 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
others(24): Show 
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0002t0001g0143
a0002c0003t0001g0213
 29 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(26): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02109.hp2
HG02486.hp1
HG02622.hp1
HG02723.hp1
HG02895.hp1
HG02922.hp1
HG03471.hp1
HG03486.hp2
HG03540.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.193+1037delT
c.193+1037delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 INFO_REALIGN_3_PRIME chrX 108129870
chrX:108129938 CT
CT
 C
C
 1 a0001c0001t0001g0039
a0001c0001t0001g0039
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.193+1089delT
c.193+1089delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 INFO_REALIGN_3_PRIME chrX 108129938
chrX:108130166 C
C
 T
T
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 HG01952.hp1
HG01952.hp1
 intron_variant MODIFIER c.194-1094C>T
c.194-1094C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108130166
chrX:108130421 C
C
 G
G
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.194-839C>G
c.194-839C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108130421
chrX:108130464 C
C
 T
T
 56 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(53): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 68 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(65): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.194-796C>T
c.194-796C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108130464
chrX:108130503 C
C
 T
T
 1 a0001c0001t0001g0157
a0001c0001t0001g0157
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.194-757C>T
c.194-757C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108130503
chrX:108130569 A
A
 G
G
 1 a0001c0001t0001g0095
a0001c0001t0001g0095
 1 NA19004.hp1
NA19004.hp1
 intron_variant MODIFIER c.194-691A>G
c.194-691A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108130569
chrX:108130662 G
G
 A
A
 1 a0001c0001t0001g0153
a0001c0001t0001g0153
 1 HG02818.hp1
HG02818.hp1
 intron_variant MODIFIER c.194-598G>A
c.194-598G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108130662
chrX:108130760 A
A
 G
G
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.194-500A>G
c.194-500A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108130760
chrX:108131032 C
C
 A
A
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.194-228C>A
c.194-228C>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 3/12 chrX 108131032
chrX:108131372 GT
GT
 G
G
 1 a0001c0001t0001g0039
a0001c0001t0001g0039
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.292+18delT
c.292+18delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108131372
chrX:108131463 T
T
 C
C
 3 a0001c0001t0001g0005
a0001c0001t0001g0191
a0001c0001t0001g0200
a0001c0001t0001g0005
a0001c0001t0001g0191
a0001c0001t0001g0200
 5 HG00140.hp1
HG00639.hp1
HG01123.hp2
others(2): Show 
HG00140.hp1
HG00639.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
 intron_variant MODIFIER c.292+105T>C
c.292+105T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108131463
chrX:108131510 A
A
 G
G
 1 a0001c0001t0002g0177
a0001c0001t0002g0177
 1 NA18975.hp2
NA18975.hp2
 intron_variant MODIFIER c.292+152A>G
c.292+152A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108131510
chrX:108131725 A
A
 G
G
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.292+367A>G
c.292+367A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108131725
chrX:108131738 G
G
 A
A
 1 a0001c0001t0002g0179
a0001c0001t0002g0179
 1 HG02723.hp1
HG02723.hp1
 intron_variant MODIFIER c.292+380G>A
c.292+380G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108131738
chrX:108131958 G
G
 A
A
 1 a0001c0001t0001g0108
a0001c0001t0001g0108
 1 HG01123.hp1
HG01123.hp1
 intron_variant MODIFIER c.292+600G>A
c.292+600G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108131958
chrX:108131987 AC
AC
 A
A
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.292+634delC
c.292+634delC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108131987
chrX:108132578 C
C
 T
T
 2 a0001c0001t0001g0199
a0001c0001t0001g0201
a0001c0001t0001g0199
a0001c0001t0001g0201
 2 HG03491.hp1
HG03492.hp1
HG03491.hp1
HG03492.hp1
 intron_variant MODIFIER c.292+1220C>T
c.292+1220C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108132578
chrX:108132744 C
C
 T
T
 1 a0001c0001t0001g0095
a0001c0001t0001g0095
 1 NA19004.hp1
NA19004.hp1
 intron_variant MODIFIER c.293-1313C>T
c.293-1313C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108132744
chrX:108132751 CA
CA
 C
C
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-1302delA
c.293-1302delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108132751
chrX:108132761 A
A
 AT
AT
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-1292dupT
c.293-1292dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108132761
chrX:108132798 G
G
 GA
GA
 6 a0001c0001t0001g0029
a0001c0001t0001g0040
a0001c0001t0001g0076
others(3): Show 
a0001c0001t0001g0029
a0001c0001t0001g0040
a0001c0001t0001g0076
a0001c0001t0001g0099
a0001c0001t0001g0104
a0001c0001t0001g0207
 6 HG00423.hp1
HG01175.hp2
HG02738.hp1
others(3): Show 
HG00423.hp1
HG01175.hp2
HG02738.hp1
NA18953.hp1
NA18965.hp1
NA19083.hp1
 intron_variant MODIFIER c.293-1243dupA
c.293-1243dupA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108132798
chrX:108132798 GA
GA
 G
G
 4 a0001c0001t0001g0063
a0001c0001t0001g0165
a0001c0001t0001g0166
others(1): Show 
a0001c0001t0001g0063
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 4 HG02257.hp2
HG02622.hp1
HG03486.hp2
others(1): Show 
HG02257.hp2
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.293-1243delA
c.293-1243delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108132798
chrX:108132921 AT
AT
 A
A
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-1135delT
c.293-1135delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108132921
chrX:108132994 GA
GA
 G
G
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-1061delA
c.293-1061delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108132994
chrX:108133079 T
T
 TG
TG
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-976dupG
c.293-976dupG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108133079
chrX:108133202 CT
CT
 C
C
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-852delT
c.293-852delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108133202
chrX:108133219 TA
TA
 T
T
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-834delA
c.293-834delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108133219
chrX:108133249 C
C
 A
A
 11 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
others(8): Show 
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 11 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(8): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02723.hp2
HG02895.hp1
HG02897.hp2
HG02965.hp1
HG03041.hp1
HG03579.hp1
NA19030.hp1
NA19043.hp1
 intron_variant MODIFIER c.293-808C>A
c.293-808C>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108133249
chrX:108133287 G
G
 GT
GT
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-767dupT
c.293-767dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108133287
chrX:108133323 G
G
 A
A
 82 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(79): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 94 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(91): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.293-734G>A
c.293-734G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108133323
chrX:108133324 GT
GT
 G
G
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-728delT
c.293-728delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108133324
chrX:108133389 G
G
 GC
GC
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-667dupC
c.293-667dupC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108133389
chrX:108133431 T
T
 TC
TC
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-625dupC
c.293-625dupC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108133431
chrX:108133452 C
C
 CT
CT
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.293-604dupT
c.293-604dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 INFO_REALIGN_3_PRIME chrX 108133452
chrX:108133563 A
A
 G
G
 1 a0001c0001t0001g0134
a0001c0001t0001g0134
 1 NA18975.hp1
NA18975.hp1
 intron_variant MODIFIER c.293-494A>G
c.293-494A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 4/12 chrX 108133563
chrX:108134417 TAA
TAA
 T
T
 1 a0001c0001t0001g0094
a0001c0001t0001g0094
 1 HG01169.hp2
HG01169.hp2
 intron_variant MODIFIER c.467+9_467+10delAA
c.467+9_467+10delAA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 INFO_REALIGN_3_PRIME chrX 108134417
chrX:108134435 G
G
 C
C
 1 a0001c0001t0001g0140
a0001c0001t0001g0140
 1 HG03041.hp2
HG03041.hp2
 intron_variant MODIFIER c.467+24G>C
c.467+24G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108134435
chrX:108134788 G
G
 A
A
 1 a0001c0001t0001g0140
a0001c0001t0001g0140
 1 HG03041.hp2
HG03041.hp2
 intron_variant MODIFIER c.467+377G>A
c.467+377G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108134788
chrX:108135011 G
G
 T
T
 11 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
others(8): Show 
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 11 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(8): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02723.hp2
HG02895.hp1
HG02897.hp2
HG02965.hp1
HG03041.hp1
HG03579.hp1
NA19030.hp1
NA19043.hp1
 intron_variant MODIFIER c.467+600G>T
c.467+600G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108135011
chrX:108135092 G
G
 A
A
 1 a0001c0001t0001g0085
a0001c0001t0001g0085
 1 NA18943.hp1
NA18943.hp1
 intron_variant MODIFIER c.467+681G>A
c.467+681G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108135092
chrX:108135518 T
T
 G
G
 56 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(53): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 68 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(65): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.467+1107T>G
c.467+1107T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108135518
chrX:108135615 G
G
 A
A
 1 a0001c0002t0001g0145
a0001c0002t0001g0145
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.467+1204G>A
c.467+1204G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108135615
chrX:108135786 A
A
 AT
AT
 5 a0001c0001t0001g0096
a0001c0001t0001g0115
a0001c0001t0001g0129
others(2): Show 
a0001c0001t0001g0096
a0001c0001t0001g0115
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0004t0001g0021
 5 HG02683.hp2
HG03239.hp1
HG03239.hp2
others(2): Show 
HG02683.hp2
HG03239.hp1
HG03239.hp2
HG04115.hp1
NA19076.hp1
 intron_variant MODIFIER c.468-1289dupT
c.468-1289dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 INFO_REALIGN_3_PRIME chrX 108135786
chrX:108135786 AT
AT
 A
A
 68 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(65): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0088
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 80 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(77): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02602.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.468-1289delT
c.468-1289delT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 INFO_REALIGN_3_PRIME chrX 108135786
chrX:108135786 ATT
ATT
 A
A
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.468-1290_468-1289d
others(4): Show 
c.468-1290_468-1289delTT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 INFO_REALIGN_3_PRIME chrX 108135786
chrX:108135847 C
C
 G
G
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.468-1244C>G
c.468-1244C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108135847
chrX:108135970 G
G
 C
C
 4 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
others(1): Show 
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
 4 HG02723.hp2
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02723.hp2
HG03041.hp1
HG03579.hp1
NA19043.hp1
 intron_variant MODIFIER c.468-1121G>C
c.468-1121G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108135970
chrX:108136017 C
C
 T
T
 2 a0001c0001t0001g0107
a0001c0001t0001g0117
a0001c0001t0001g0107
a0001c0001t0001g0117
 2 HG00621.hp1
NA18940.hp1
HG00621.hp1
NA18940.hp1
 intron_variant MODIFIER c.468-1074C>T
c.468-1074C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108136017
chrX:108136028 C
C
 T
T
 1 a0001c0001t0001g0086
a0001c0001t0001g0086
 1 NA18961.hp1
NA18961.hp1
 intron_variant MODIFIER c.468-1063C>T
c.468-1063C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108136028
chrX:108136131 G
G
 A
A
 1 a0001c0001t0001g0216
a0001c0001t0001g0216
 1 HG02257.hp1
HG02257.hp1
 intron_variant MODIFIER c.468-960G>A
c.468-960G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108136131
chrX:108136334 C
C
 G
G
 22 a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
others(19): Show 
a0001c0001t0001g0183
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 24 HG00558.hp1
HG01081.hp2
HG01109.hp1
others(21): Show 
HG00558.hp1
HG01081.hp2
HG01109.hp1
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.468-757C>G
c.468-757C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108136334
chrX:108136521 A
A
 G
G
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.468-570A>G
c.468-570A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108136521
chrX:108136693 G
G
 GT
GT
 3 a0001c0001t0001g0032
a0001c0001t0001g0063
a0001c0001t0001g0121
a0001c0001t0001g0032
a0001c0001t0001g0063
a0001c0001t0001g0121
 3 HG02257.hp2
NA20129.hp1
NA20129.hp2
HG02257.hp2
NA20129.hp1
NA20129.hp2
 intron_variant MODIFIER c.468-391dupT
c.468-391dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 INFO_REALIGN_3_PRIME chrX 108136693
chrX:108136925 A
A
 G
G
 1 a0001c0001t0002g0176
a0001c0001t0002g0176
 1 NA18984.hp1
NA18984.hp1
 intron_variant MODIFIER c.468-166A>G
c.468-166A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 6/12 chrX 108136925
chrX:108137278 C
C
 T
T
 1 a0001c0001t0003g0149
a0001c0001t0003g0149
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.547+108C>T
c.547+108C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 7/12 chrX 108137278
chrX:108137430 C
C
 T
T
 2 a0001c0001t0001g0055
a0001c0001t0001g0061
a0001c0001t0001g0055
a0001c0001t0001g0061
 2 HG02630.hp1
HG02818.hp2
HG02630.hp1
HG02818.hp2
 intron_variant MODIFIER c.547+260C>T
c.547+260C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 7/12 chrX 108137430
chrX:108137574 TC
TC
 T
T
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.548-227delC
c.548-227delC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 7/12 INFO_REALIGN_3_PRIME chrX 108137574
chrX:108138554 C
C
 T
T
 1 a0001c0002t0001g0142
a0001c0002t0001g0142
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.814+363C>T
c.814+363C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108138554
chrX:108139144 T
T
 C
C
 80 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(77): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 92 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(89): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+953T>C
c.814+953T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108139144
chrX:108139171 A
A
 G
G
 1 a0001c0001t0001g0114
a0001c0001t0001g0114
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.814+980A>G
c.814+980A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108139171
chrX:108139277 G
G
 T
T
 34 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(31): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 44 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(41): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02056.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02809.hp2
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp2
HG04228.hp1
NA19082.hp1
NA19088.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.814+1086G>T
c.814+1086G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108139277
chrX:108139387 C
C
 T
T
 1 a0001c0001t0001g0093
a0001c0001t0001g0093
 1 HG02083.hp1
HG02083.hp1
 intron_variant MODIFIER c.814+1196C>T
c.814+1196C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108139387
chrX:108139466 T
T
 TG
TG
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.814+1281dupG
c.814+1281dupG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108139466
chrX:108139503 G
G
 C
C
 1 a0001c0001t0003g0149
a0001c0001t0003g0149
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.814+1312G>C
c.814+1312G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108139503
chrX:108139777 T
T
 TGTCTCAC
TGTCTCAC
 59 a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0010
others(56): Show 
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0067
a0001c0001t0001g0073
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0086
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0095
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0129
a0001c0001t0001g0132
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0138
a0001c0004t0001g0021
 69 HG00423.hp2
HG00621.hp1
HG00733.hp1
others(66): Show 
HG00423.hp2
HG00621.hp1
HG00733.hp1
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01123.hp1
HG01169.hp2
HG01256.hp1
HG01261.hp1
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG02015.hp1
HG02040.hp1
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02300.hp1
HG02602.hp1
HG02683.hp2
HG02738.hp1
HG03654.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18970.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18999.hp2
NA19003.hp1
NA19004.hp1
NA19009.hp1
NA19010.hp2
NA19012.hp1
NA19055.hp1
NA19062.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19068.hp1
NA19076.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA20129.hp1
NA20905.hp1
 intron_variant MODIFIER c.814+1587_814+1593d
others(9): Show 
c.814+1587_814+1593dupGTCTCAC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108139777
chrX:108139822 C
C
 T
T
 1 a0001c0001t0001g0030
a0001c0001t0001g0030
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.814+1631C>T
c.814+1631C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108139822
chrX:108139943 A
A
 C
C
 80 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(77): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 92 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(89): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+1752A>C
c.814+1752A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108139943
chrX:108140021 A
A
 C
C
 1 a0001c0001t0001g0094
a0001c0001t0001g0094
 1 HG01169.hp2
HG01169.hp2
 intron_variant MODIFIER c.814+1830A>C
c.814+1830A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140021
chrX:108140207 C
C
 T
T
 1 a0001c0001t0002g0177
a0001c0001t0002g0177
 1 NA18975.hp2
NA18975.hp2
 intron_variant MODIFIER c.814+2016C>T
c.814+2016C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140207
chrX:108140487 T
T
 A
A
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.814+2296T>A
c.814+2296T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140487
chrX:108140550 T
T
 TAC
TAC
 21 a0001c0001t0001g0123
a0001c0001t0002g0017
a0001c0001t0002g0018
others(18): Show 
a0001c0001t0001g0123
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 23 HG00558.hp1
HG01081.hp2
HG01361.hp2
others(20): Show 
HG00558.hp1
HG01081.hp2
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02074.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.814+2377_814+2378d
others(4): Show 
c.814+2377_814+2378dupCA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140550
chrX:108140550 TAC
TAC
 T
T
 2 a0001c0001t0001g0068
a0001c0001t0001g0157
a0001c0001t0001g0068
a0001c0001t0001g0157
 2 HG02129.hp1
NA19240.hp1
HG02129.hp1
NA19240.hp1
 intron_variant MODIFIER c.814+2377_814+2378d
others(4): Show 
c.814+2377_814+2378delCA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140550
chrX:108140564 CACACATT
others(9): Show 
CACACATTTATACATAT
 C
C
 1 a0001c0001t0001g0067
a0001c0001t0001g0067
 1 HG02300.hp1
HG02300.hp1
 intron_variant MODIFIER c.814+2375_814+2390d
others(18): Show 
c.814+2375_814+2390delCACATTTATACATATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140564
chrX:108140566 CACATTTA
others(1): Show 
CACATTTAT
 C
C
 1 a0001c0001t0002g0170
a0001c0001t0002g0170
 1 HG03831.hp1
HG03831.hp1
 intron_variant MODIFIER c.814+2380_814+2387d
others(10): Show 
c.814+2380_814+2387delTTATACAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140566
chrX:108140574 T
T
 A
A
 3 a0001c0001t0001g0005
a0001c0001t0001g0191
a0001c0001t0001g0200
a0001c0001t0001g0005
a0001c0001t0001g0191
a0001c0001t0001g0200
 5 HG00140.hp1
HG00639.hp1
HG01123.hp2
others(2): Show 
HG00140.hp1
HG00639.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
 intron_variant MODIFIER c.814+2383T>A
c.814+2383T>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140574
chrX:108140578 T
T
 C
C
 1 a0001c0001t0002g0170
a0001c0001t0002g0170
 1 HG03831.hp1
HG03831.hp1
 intron_variant MODIFIER c.814+2387T>C
c.814+2387T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140578
chrX:108140581 A
A
 T
T
 1 a0001c0001t0002g0170
a0001c0001t0002g0170
 1 HG03831.hp1
HG03831.hp1
 intron_variant MODIFIER c.814+2390A>T
c.814+2390A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140581
chrX:108140610 AAT
AAT
 A
A
 2 a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0110
a0001c0001t0001g0111
 2 HG03453.hp1
NA19240.hp2
HG03453.hp1
NA19240.hp2
 intron_variant MODIFIER c.814+2429_814+2430d
others(4): Show 
c.814+2429_814+2430delTA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140610
chrX:108140774 AATAT
AATAT
 A
A
 1 a0001c0001t0001g0041
a0001c0001t0001g0041
 1 HG01074.hp1
HG01074.hp1
 intron_variant MODIFIER c.814+2587_814+2590d
others(6): Show 
c.814+2587_814+2590delTATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140774
chrX:108140791 C
C
 A
A
 80 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(77): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 92 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(89): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+2600C>A
c.814+2600C>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140791
chrX:108140927 CAT
CAT
 C
C
 2 a0001c0001t0001g0107
a0001c0001t0001g0117
a0001c0001t0001g0107
a0001c0001t0001g0117
 2 HG00621.hp1
NA18940.hp1
HG00621.hp1
NA18940.hp1
 intron_variant MODIFIER c.814+2744_814+2745d
others(4): Show 
c.814+2744_814+2745delTA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140927
chrX:108140933 TATAC
TATAC
 T
T
 21 a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
others(18): Show 
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 23 HG00558.hp1
HG01081.hp2
HG01361.hp2
others(20): Show 
HG00558.hp1
HG01081.hp2
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.814+2746_814+2749d
others(6): Show 
c.814+2746_814+2749delCATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140933
chrX:108140937 CAT
CAT
 C
C
 34 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(31): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 44 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(41): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02056.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02809.hp2
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp2
HG04228.hp1
NA19082.hp1
NA19088.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.814+2754_814+2755d
others(4): Show 
c.814+2754_814+2755delTA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140937
chrX:108140939 T
T
 C
C
 21 a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
others(18): Show 
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 23 HG00558.hp1
HG01081.hp2
HG01361.hp2
others(20): Show 
HG00558.hp1
HG01081.hp2
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.814+2748T>C
c.814+2748T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140939
chrX:108140939 T
T
 TATATACA
others(9): Show 
TATATACACATATATAC
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.814+2753_814+2754i
others(18): Show 
c.814+2753_814+2754insCACATATATACATATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140939
chrX:108140985 TAC
TAC
 T
T
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+2795_814+2796d
others(4): Show 
c.814+2795_814+2796delAC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108140985
chrX:108140995 TATAC
TATAC
 T
T
 1 a0001c0001t0001g0159
a0001c0001t0001g0159
 1 HG02922.hp2
HG02922.hp2
 intron_variant MODIFIER c.814+2808_814+2811d
others(6): Show 
c.814+2808_814+2811delCATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140995
chrX:108140997 T
T
 TACATATA
others(15): Show 
TACATATATATACGTATATATAC
 1 a0001c0001t0002g0179
a0001c0001t0002g0179
 1 HG02723.hp1
HG02723.hp1
 intron_variant MODIFIER c.814+2819_814+2840d
others(24): Show 
c.814+2819_814+2840dupGTATATATACACATATATATAC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140997
chrX:108140999 CAT
CAT
 C
C
 12 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(9): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 12 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(9): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+2816_814+2817d
others(4): Show 
c.814+2816_814+2817delTA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108140999
chrX:108141001 T
T
 C
C
 1 a0001c0001t0001g0159
a0001c0001t0001g0159
 1 HG02922.hp2
HG02922.hp2
 intron_variant MODIFIER c.814+2810T>C
c.814+2810T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141001
chrX:108141001 T
T
 TATATATA
others(13): Show 
TATATATACGTATATATACAC
 1 a0001c0001t0002g0171
a0001c0001t0002g0171
 1 NA19003.hp2
NA19003.hp2
 intron_variant MODIFIER c.814+2818_814+2837d
others(22): Show 
c.814+2818_814+2837dupCGTATATATACACATATATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141001
chrX:108141021 CAT
CAT
 C
C
 1 a0001c0001t0001g0043
a0001c0001t0001g0043
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.814+2838_814+2839d
others(4): Show 
c.814+2838_814+2839delTA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141021
chrX:108141023 TATATATA
others(1): Show 
TATATATAC
 T
T
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+2848_814+2855d
others(10): Show 
c.814+2848_814+2855delCATATATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141023
chrX:108141031 C
C
 CGTAT
CGTAT
 20 a0001c0001t0001g0168
a0001c0001t0002g0017
a0001c0001t0002g0018
others(17): Show 
a0001c0001t0001g0168
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 22 HG00558.hp1
HG01081.hp2
HG01361.hp2
others(19): Show 
HG00558.hp1
HG01081.hp2
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02080.hp2
HG02109.hp1
HG02486.hp1
HG02922.hp1
HG03471.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.814+2840_814+2841i
others(6): Show 
c.814+2840_814+2841insGTAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141031
chrX:108141037 T
T
 C
C
 19 a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
others(16): Show 
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 21 HG00558.hp1
HG01081.hp2
HG01361.hp2
others(18): Show 
HG00558.hp1
HG01081.hp2
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02922.hp1
HG03471.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.814+2846T>C
c.814+2846T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141037
chrX:108141040 A
A
 G
G
 1 a0001c0001t0001g0079
a0001c0001t0001g0079
 1 NA18999.hp2
NA18999.hp2
 intron_variant MODIFIER c.814+2849A>G
c.814+2849A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141040
chrX:108141054 A
A
 T
T
 1 a0001c0001t0001g0206
a0001c0001t0001g0206
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.814+2863A>T
c.814+2863A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141054
chrX:108141057 CGT
CGT
 C
C
 2 a0001c0001t0001g0197
a0001c0001t0002g0179
a0001c0001t0001g0197
a0001c0001t0002g0179
 2 HG01175.hp1
HG02723.hp1
HG01175.hp1
HG02723.hp1
 intron_variant MODIFIER c.814+2869_814+2870d
others(4): Show 
c.814+2869_814+2870delGT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141057
chrX:108141057 CGTGT
CGTGT
 C
C
 3 a0001c0001t0002g0170
a0001c0001t0002g0178
a0001c0001t0002g0187
a0001c0001t0002g0170
a0001c0001t0002g0178
a0001c0001t0002g0187
 3 HG01361.hp2
HG01884.hp2
HG03831.hp1
HG01361.hp2
HG01884.hp2
HG03831.hp1
 intron_variant MODIFIER c.814+2867_814+2870d
others(6): Show 
c.814+2867_814+2870delGTGT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141057
chrX:108141058 G
G
 A
A
 16 a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0172
others(13): Show 
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 18 HG00558.hp1
HG01081.hp2
HG01975.hp2
others(15): Show 
HG00558.hp1
HG01081.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02922.hp1
HG03471.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.814+2867G>A
c.814+2867G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141058
chrX:108141058 G
G
 GTATA
GTATA
 1 a0001c0001t0001g0196
a0001c0001t0001g0196
 1 HG03669.hp2
HG03669.hp2
 intron_variant MODIFIER c.814+2868_814+2869i
others(6): Show 
c.814+2868_814+2869insATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141058
chrX:108141058 GTGTA
GTGTA
 G
G
 4 a0001c0001t0001g0198
a0001c0001t0001g0217
a0001c0001t0002g0171
others(1): Show 
a0001c0001t0001g0198
a0001c0001t0001g0217
a0001c0001t0002g0171
a0002c0003t0001g0213
 4 HG02109.hp2
HG02698.hp1
HG03831.hp2
others(1): Show 
HG02109.hp2
HG02698.hp1
HG03831.hp2
NA19003.hp2
 intron_variant MODIFIER c.814+2869_814+2872d
others(6): Show 
c.814+2869_814+2872delGTAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141058
chrX:108141058 GTGTATA
GTGTATA
 G
G
 9 a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0199
others(6): Show 
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0199
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0216
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0214
 9 HG01257.hp1
HG02257.hp1
HG02280.hp1
others(6): Show 
HG01257.hp1
HG02257.hp1
HG02280.hp1
HG02630.hp2
HG03209.hp1
HG03491.hp1
HG03492.hp1
HG03688.hp1
NA20805.hp1
 intron_variant MODIFIER c.814+2869_814+2874d
others(8): Show 
c.814+2869_814+2874delGTATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141058
chrX:108141058 GTGTATAT
others(1): Show 
GTGTATATA
 G
G
 8 a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
others(5): Show 
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0200
a0001c0001t0001g0203
a0001c0001t0001g0218
 13 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(10): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG04228.hp1
NA20752.hp1
 intron_variant MODIFIER c.814+2869_814+2876d
others(10): Show 
c.814+2869_814+2876delGTATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141058
chrX:108141058 GTGTATAT
others(3): Show 
GTGTATATATA
 G
G
 5 a0001c0001t0001g0020
a0001c0001t0001g0192
a0001c0001t0001g0193
others(2): Show 
a0001c0001t0001g0020
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0208
a0001c0001t0001g0212
 6 HG01243.hp1
HG01516.hp1
HG01517.hp1
others(3): Show 
HG01243.hp1
HG01516.hp1
HG01517.hp1
HG02683.hp1
HG03453.hp2
HG03516.hp2
 intron_variant MODIFIER c.814+2869_814+2878d
others(12): Show 
c.814+2869_814+2878delGTATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141058
chrX:108141058 GTGTATAT
others(9): Show 
GTGTATATATATACATA
 G
G
 6 a0001c0001t0001g0001
a0001c0001t0001g0206
a0001c0001t0001g0207
others(3): Show 
a0001c0001t0001g0001
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0215
 10 HG00423.hp1
HG02056.hp1
HG02132.hp1
others(7): Show 
HG00423.hp1
HG02056.hp1
HG02132.hp1
HG02135.hp1
HG02451.hp1
HG02559.hp1
HG02809.hp2
HG02970.hp2
NA19082.hp1
NA19088.hp1
 intron_variant MODIFIER c.814+2869_814+2884d
others(18): Show 
c.814+2869_814+2884delGTATATATATACATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141058
chrX:108141059 TGTATATA
others(5): Show 
TGTATATATATAC
 T
T
 1 a0001c0001t0001g0211
a0001c0001t0001g0211
 1 HG03486.hp1
HG03486.hp1
 intron_variant MODIFIER c.814+2869_814+2880d
others(14): Show 
c.814+2869_814+2880delGTATATATATAC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141059
chrX:108141060 G
G
 A
A
 17 a0001c0001t0001g0196
a0001c0001t0002g0017
a0001c0001t0002g0018
others(14): Show 
a0001c0001t0001g0196
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 19 HG00558.hp1
HG01081.hp2
HG01975.hp2
others(16): Show 
HG00558.hp1
HG01081.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02922.hp1
HG03471.hp1
HG03669.hp2
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.814+2869G>A
c.814+2869G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141060
chrX:108141062 A
A
 ATATACAT
others(7): Show 
ATATACATATATACG
 3 a0001c0001t0002g0172
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0172
a0001c0001t0002g0188
a0001c0001t0002g0189
 3 HG02922.hp1
NA18944.hp1
NA19056.hp1
HG02922.hp1
NA18944.hp1
NA19056.hp1
 intron_variant MODIFIER c.814+2875_814+2876i
others(16): Show 
c.814+2875_814+2876insCATATATACGTATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141062
chrX:108141063 T
T
 TATAC
TATAC
 2 a0001c0001t0002g0018
a0001c0001t0002g0175
a0001c0001t0002g0018
a0001c0001t0002g0175
 3 HG01975.hp2
HG01978.hp1
NA19090.hp1
HG01975.hp2
HG01978.hp1
NA19090.hp1
 intron_variant MODIFIER c.814+2875_814+2876i
others(6): Show 
c.814+2875_814+2876insCATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141063
chrX:108141064 A
A
 ATACATAT
others(5): Show 
ATACATATATACG
 5 a0001c0001t0002g0017
a0001c0001t0002g0173
a0001c0001t0002g0176
others(2): Show 
a0001c0001t0002g0017
a0001c0001t0002g0173
a0001c0001t0002g0176
a0001c0001t0002g0180
a0001c0001t0002g0186
 6 HG03471.hp1
HG06807.hp1
NA18984.hp1
others(3): Show 
HG03471.hp1
HG06807.hp1
NA18984.hp1
NA19007.hp1
NA19010.hp1
NA19077.hp2
 intron_variant MODIFIER c.814+2875_814+2876i
others(14): Show 
c.814+2875_814+2876insCATATATACGTA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141064
chrX:108141066 A
A
 ACATATAT
others(3): Show 
ACATATATACG
 6 a0001c0001t0002g0174
a0001c0001t0002g0177
a0001c0001t0002g0181
others(3): Show 
a0001c0001t0002g0174
a0001c0001t0002g0177
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0190
 6 HG00558.hp1
HG01081.hp2
HG02109.hp1
others(3): Show 
HG00558.hp1
HG01081.hp2
HG02109.hp1
HG02486.hp1
NA18522.hp1
NA18975.hp2
 intron_variant MODIFIER c.814+2875_814+2876i
others(12): Show 
c.814+2875_814+2876insCATATATACG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141066
chrX:108141071 C
C
 CAT
CAT
 13 a0001c0001t0001g0074
a0001c0001t0001g0121
a0001c0001t0001g0153
others(10): Show 
a0001c0001t0001g0074
a0001c0001t0001g0121
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0157
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0165
a0001c0001t0001g0167
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
 13 HG01071.hp1
HG01106.hp1
HG02818.hp1
others(10): Show 
HG01071.hp1
HG01106.hp1
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp2
HG03195.hp2
HG03486.hp2
HG03540.hp1
NA19030.hp2
NA19240.hp1
NA20129.hp1
NA20300.hp1
 intron_variant MODIFIER c.814+2917_814+2918d
others(4): Show 
c.814+2917_814+2918dupAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 C
C
 CATAT
CATAT
 14 a0001c0001t0001g0033
a0001c0001t0001g0049
a0001c0001t0001g0067
others(11): Show 
a0001c0001t0001g0033
a0001c0001t0001g0049
a0001c0001t0001g0067
a0001c0001t0001g0081
a0001c0001t0001g0113
a0001c0001t0001g0152
a0001c0001t0001g0156
a0001c0001t0001g0158
a0001c0001t0001g0162
a0001c0001t0003g0149
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0148
 14 HG00099.hp1
HG00741.hp2
HG02258.hp1
others(11): Show 
HG00099.hp1
HG00741.hp2
HG02258.hp1
HG02300.hp1
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG03098.hp1
HG03579.hp1
NA18985.hp1
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+2915_814+2918d
others(6): Show 
c.814+2915_814+2918dupATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 C
C
 CATATAT
CATATAT
 13 a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0034
others(10): Show 
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0034
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0070
a0001c0001t0001g0112
a0001c0001t0001g0137
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0002t0001g0146
a0001c0002t0001g0147
 13 HG00639.hp2
HG01361.hp1
HG01884.hp1
others(10): Show 
HG00639.hp2
HG01361.hp1
HG01884.hp1
HG02723.hp2
HG02965.hp1
HG03041.hp1
NA18965.hp1
NA19005.hp1
NA19006.hp1
NA19058.hp1
NA19067.hp1
NA19089.hp1
NA19090.hp2
 intron_variant MODIFIER c.814+2913_814+2918d
others(8): Show 
c.814+2913_814+2918dupATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 C
C
 CATATATA
others(1): Show 
CATATATAT
 2 a0001c0001t0001g0039
a0001c0001t0001g0045
a0001c0001t0001g0039
a0001c0001t0001g0045
 2 HG01099.hp1
NA19072.hp1
HG01099.hp1
NA19072.hp1
 intron_variant MODIFIER c.814+2911_814+2918d
others(10): Show 
c.814+2911_814+2918dupATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 C
C
 CATATATA
others(3): Show 
CATATATATAT
 1 a0001c0001t0001g0071
a0001c0001t0001g0071
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.814+2909_814+2918d
others(12): Show 
c.814+2909_814+2918dupATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 C
C
 CATATATA
others(5): Show 
CATATATATATAT
 2 a0001c0001t0001g0069
a0001c0001t0001g0166
a0001c0001t0001g0069
a0001c0001t0001g0166
 2 HG02622.hp1
NA19060.hp1
HG02622.hp1
NA19060.hp1
 intron_variant MODIFIER c.814+2907_814+2918d
others(14): Show 
c.814+2907_814+2918dupATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 C
C
 CATATATA
others(7): Show 
CATATATATATATAT
 2 a0001c0001t0001g0044
a0001c0001t0001g0089
a0001c0001t0001g0044
a0001c0001t0001g0089
 2 HG02071.hp1
NA18989.hp1
HG02071.hp1
NA18989.hp1
 intron_variant MODIFIER c.814+2905_814+2918d
others(16): Show 
c.814+2905_814+2918dupATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 C
C
 CGTAT
CGTAT
 1 a0001c0001t0002g0018
a0001c0001t0002g0018
 2 HG01975.hp2
HG01978.hp1
HG01975.hp2
HG01978.hp1
 intron_variant MODIFIER c.814+2880_814+2881i
others(6): Show 
c.814+2880_814+2881insGTAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141071
chrX:108141071 C
C
 T
T
 42 a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
others(39): Show 
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0208
a0001c0001t0001g0212
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 49 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(46): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02109.hp1
HG02109.hp2
HG02257.hp1
HG02280.hp1
HG02486.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02922.hp1
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.814+2880C>T
c.814+2880C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141071
chrX:108141071 CAT
CAT
 C
C
 23 a0001c0001t0001g0013
a0001c0001t0001g0016
a0001c0001t0001g0042
others(20): Show 
a0001c0001t0001g0013
a0001c0001t0001g0016
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0079
a0001c0001t0001g0082
a0001c0001t0001g0090
a0001c0001t0001g0091
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0115
a0001c0001t0001g0126
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0136
a0001c0001t0001g0140
a0001c0001t0001g0161
a0001c0001t0001g0183
a0001c0001t0001g0194
 25 HG01081.hp1
HG01109.hp1
HG01943.hp1
others(22): Show 
HG01081.hp1
HG01109.hp1
HG01943.hp1
HG01975.hp1
HG02145.hp1
HG02559.hp2
HG02809.hp1
HG02897.hp1
HG03041.hp2
HG03130.hp1
HG03225.hp1
HG03239.hp1
HG03239.hp2
HG03516.hp1
HG03540.hp2
HG03688.hp1
HG03942.hp1
NA18960.hp1
NA18966.hp1
NA18974.hp1
NA18982.hp1
NA18999.hp2
NA19065.hp1
NA19065.hp2
NA19070.hp1
 intron_variant MODIFIER c.814+2917_814+2918d
others(4): Show 
c.814+2917_814+2918delAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 CATAT
CATAT
 C
C
 73 a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
others(70): Show 
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0011
a0001c0001t0001g0012
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0022
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0027
a0001c0001t0001g0028
a0001c0001t0001g0035
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0053
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0063
a0001c0001t0001g0065
a0001c0001t0001g0068
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0086
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0093
a0001c0001t0001g0095
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0107
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0120
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0129
a0001c0001t0001g0132
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0141
a0001c0001t0001g0164
a0001c0001t0002g0170
a0001c0001t0002g0178
a0001c0001t0002g0187
a0001c0001t0004g0052
a0001c0004t0001g0021
a0001c0005t0001g0219
 88 HG00323.hp2
HG00423.hp2
HG00558.hp2
others(85): Show 
HG00323.hp2
HG00423.hp2
HG00558.hp2
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01175.hp2
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp2
HG01258.hp1
HG01358.hp1
HG01361.hp2
HG01433.hp1
HG01515.hp1
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01928.hp1
HG01952.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02129.hp1
HG02257.hp2
HG02602.hp1
HG02683.hp2
HG02735.hp1
HG02738.hp1
HG02970.hp1
HG03017.hp1
HG03139.hp1
HG03491.hp2
HG03654.hp1
HG03669.hp1
HG03710.hp1
HG03831.hp1
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG06807.hp2
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18961.hp1
NA18962.hp1
NA18970.hp1
NA18971.hp1
NA18975.hp1
NA18977.hp1
NA18986.hp1
NA18988.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19004.hp1
NA19010.hp2
NA19066.hp1
NA19076.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.814+2915_814+2918d
others(6): Show 
c.814+2915_814+2918delATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 CATATAT
CATATAT
 C
C
 10 a0001c0001t0001g0032
a0001c0001t0001g0055
a0001c0001t0001g0059
others(7): Show 
a0001c0001t0001g0032
a0001c0001t0001g0055
a0001c0001t0001g0059
a0001c0001t0001g0061
a0001c0001t0001g0092
a0001c0001t0001g0094
a0001c0001t0001g0100
a0001c0001t0001g0106
a0001c0001t0001g0111
a0001c0001t0001g0135
 10 HG01169.hp2
HG01261.hp1
HG02630.hp1
others(7): Show 
HG01169.hp2
HG01261.hp1
HG02630.hp1
HG02818.hp2
HG03195.hp1
HG03453.hp1
NA19055.hp1
NA19062.hp1
NA19068.hp1
NA20129.hp2
 intron_variant MODIFIER c.814+2913_814+2918d
others(8): Show 
c.814+2913_814+2918delATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 CATATATA
others(9): Show 
CATATATATATATATAT
 C
C
 1 a0001c0001t0001g0054
a0001c0001t0001g0054
 1 NA18983.hp1
NA18983.hp1
 intron_variant MODIFIER c.814+2903_814+2918d
others(18): Show 
c.814+2903_814+2918delATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141071 CATATATA
others(13): Show 
CATATATATATATATATATAT
 C
C
 1 a0001c0001t0001g0036
a0001c0001t0001g0036
 1 NA19000.hp1
NA19000.hp1
 intron_variant MODIFIER c.814+2899_814+2918d
others(22): Show 
c.814+2899_814+2918delATATATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141071
chrX:108141072 A
A
 G
G
 1 a0001c0001t0002g0175
a0001c0001t0002g0175
 1 NA19090.hp1
NA19090.hp1
 intron_variant MODIFIER c.814+2881A>G
c.814+2881A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141072
chrX:108141077 T
T
 TAC
TAC
 1 a0001c0001t0001g0127
a0001c0001t0001g0127
 1 HG02622.hp2
HG02622.hp2
 intron_variant MODIFIER c.814+2887_814+2888i
others(4): Show 
c.814+2887_814+2888insCA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141077
chrX:108141081 T
T
 C
C
 2 a0001c0001t0001g0126
a0001c0001t0001g0183
a0001c0001t0001g0126
a0001c0001t0001g0183
 2 HG01109.hp1
HG03540.hp2
HG01109.hp1
HG03540.hp2
 intron_variant MODIFIER c.814+2890T>C
c.814+2890T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141081
chrX:108141083 T
T
 C
C
 3 a0001c0001t0002g0170
a0001c0001t0002g0178
a0001c0001t0002g0187
a0001c0001t0002g0170
a0001c0001t0002g0178
a0001c0001t0002g0187
 3 HG01361.hp2
HG01884.hp2
HG03831.hp1
HG01361.hp2
HG01884.hp2
HG03831.hp1
 intron_variant MODIFIER c.814+2892T>C
c.814+2892T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141083
chrX:108141084 A
A
 G
G
 3 a0001c0001t0002g0170
a0001c0001t0002g0178
a0001c0001t0002g0187
a0001c0001t0002g0170
a0001c0001t0002g0178
a0001c0001t0002g0187
 3 HG01361.hp2
HG01884.hp2
HG03831.hp1
HG01361.hp2
HG01884.hp2
HG03831.hp1
 intron_variant MODIFIER c.814+2893A>G
c.814+2893A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141084
chrX:108141091 T
T
 TAC
TAC
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.814+2901_814+2902i
others(4): Show 
c.814+2901_814+2902insCA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141091
chrX:108141094 A
A
 G
G
 1 a0001c0001t0001g0083
a0001c0001t0001g0083
 1 HG02280.hp2
HG02280.hp2
 intron_variant MODIFIER c.814+2903A>G
c.814+2903A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141094
chrX:108141275 G
G
 C
C
 1 a0001c0001t0003g0149
a0001c0001t0003g0149
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.814+3084G>C
c.814+3084G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141275
chrX:108141338 A
A
 ATCCTATC
others(22): Show 
ATCCTATCTACTTGATTATTAATCAAGAAT
 1 a0001c0001t0001g0091
a0001c0001t0001g0091
 1 NA19065.hp1
NA19065.hp1
 intron_variant MODIFIER c.814+3148_814+3176d
others(31): Show 
c.814+3148_814+3176dupTCCTATCTACTTGATTATTAATCAAGAA
T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108141338
chrX:108141564 G
G
 T
T
 1 a0001c0002t0001g0142
a0001c0002t0001g0142
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.814+3373G>T
c.814+3373G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141564
chrX:108141875 C
C
 T
T
 80 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(77): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 92 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(89): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+3684C>T
c.814+3684C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141875
chrX:108141920 C
C
 T
T
 1 a0001c0005t0001g0219
a0001c0005t0001g0219
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.814+3729C>T
c.814+3729C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141920
chrX:108141997 A
A
 G
G
 1 a0001c0001t0003g0149
a0001c0001t0003g0149
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.814+3806A>G
c.814+3806A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108141997
chrX:108142132 C
C
 T
T
 21 a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
others(18): Show 
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
 23 HG00558.hp1
HG01081.hp2
HG01361.hp2
others(20): Show 
HG00558.hp1
HG01081.hp2
HG01361.hp2
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG03831.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19090.hp1
 intron_variant MODIFIER c.814+3941C>T
c.814+3941C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108142132
chrX:108142210 C
C
 G
G
 3 a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0183
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0183
 3 HG01109.hp1
HG02622.hp2
HG03540.hp2
HG01109.hp1
HG02622.hp2
HG03540.hp2
 intron_variant MODIFIER c.814+4019C>G
c.814+4019C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108142210
chrX:108142236 G
G
 A
A
 1 a0001c0001t0001g0023
a0001c0001t0001g0023
 1 HG00323.hp2
HG00323.hp2
 intron_variant MODIFIER c.814+4045G>A
c.814+4045G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108142236
chrX:108142236 G
G
 T
T
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.814+4045G>T
c.814+4045G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108142236
chrX:108142276 C
C
 T
T
 56 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(53): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 68 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(65): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.814+4085C>T
c.814+4085C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108142276
chrX:108142335 C
C
 T
T
 4 a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
others(1): Show 
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0147
 4 HG01106.hp1
HG01884.hp1
HG02895.hp1
others(1): Show 
HG01106.hp1
HG01884.hp1
HG02895.hp1
HG02897.hp2
 intron_variant MODIFIER c.814+4144C>T
c.814+4144C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108142335
chrX:108142505 T
T
 TAC
TAC
 1 a0001c0001t0001g0064
a0001c0001t0001g0064
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.814+4332_814+4333d
others(4): Show 
c.814+4332_814+4333dupCA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108142505
chrX:108142505 TAC
TAC
 T
T
 1 a0001c0001t0002g0182
a0001c0001t0002g0182
 1 HG02109.hp1
HG02109.hp1
 intron_variant MODIFIER c.814+4332_814+4333d
others(4): Show 
c.814+4332_814+4333delCA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108142505
chrX:108143233 G
G
 A
A
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG04184.hp2
HG04184.hp2
 intron_variant MODIFIER c.814+5042G>A
c.814+5042G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108143233
chrX:108143417 T
T
 C
C
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.814+5226T>C
c.814+5226T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108143417
chrX:108143647 A
A
 G
G
 84 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(81): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 96 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(93): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.814+5456A>G
c.814+5456A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108143647
chrX:108143722 G
G
 A
A
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.814+5531G>A
c.814+5531G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108143722
chrX:108143989 CAGGCTGA
others(115): Show 
CAGGCTGATGGGGAACATGGTAAGACCAGTGAATTCCATGAGAATGAGCT
CACTGCCACACTTTCTTAGCCATAAAGTGAGTGCCTTGGTCAGAGTCTGT
GTGGGATACCATGATGTTGGATA
 C
C
 1 a0001c0001t0001g0168
a0001c0001t0001g0168
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.814+5847_814+5968d
others(2): Show 
c.814+5847_814+5968del
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108143989
chrX:108144083 G
G
 A
A
 1 a0001c0001t0001g0162
a0001c0001t0001g0162
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.814+5892G>A
c.814+5892G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108144083
chrX:108144416 C
C
 G
G
 6 a0001c0001t0001g0032
a0001c0001t0001g0051
a0001c0001t0001g0055
others(3): Show 
a0001c0001t0001g0032
a0001c0001t0001g0051
a0001c0001t0001g0055
a0001c0001t0001g0059
a0001c0001t0001g0061
a0001c0001t0001g0063
 6 HG02257.hp2
HG02630.hp1
HG02809.hp1
others(3): Show 
HG02257.hp2
HG02630.hp1
HG02809.hp1
HG02818.hp2
HG03195.hp1
NA20129.hp2
 intron_variant MODIFIER c.815-5736C>G
c.815-5736C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108144416
chrX:108144522 G
G
 A
A
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.815-5630G>A
c.815-5630G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108144522
chrX:108144841 T
T
 C
C
 1 a0001c0004t0001g0021
a0001c0004t0001g0021
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.815-5311T>C
c.815-5311T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108144841
chrX:108144854 A
A
 G
G
 1 a0001c0001t0002g0178
a0001c0001t0002g0178
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.815-5298A>G
c.815-5298A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108144854
chrX:108144915 C
C
 T
T
 1 a0001c0001t0001g0152
a0001c0001t0001g0152
 1 NA21309.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-5237C>T
c.815-5237C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108144915
chrX:108145266 G
G
 A
A
 1 a0001c0001t0001g0192
a0001c0001t0001g0192
 1 HG02683.hp1
HG02683.hp1
 intron_variant MODIFIER c.815-4886G>A
c.815-4886G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108145266
chrX:108145350 G
G
 A
A
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-4802G>A
c.815-4802G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108145350
chrX:108145454 G
G
 A
A
 1 a0001c0001t0001g0098
a0001c0001t0001g0098
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.815-4698G>A
c.815-4698G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108145454
chrX:108145661 A
A
 G
G
 56 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(53): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 68 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(65): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.815-4491A>G
c.815-4491A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108145661
chrX:108145748 G
G
 T
T
 1 a0001c0001t0001g0085
a0001c0001t0001g0085
 1 NA18943.hp1
NA18943.hp1
 intron_variant MODIFIER c.815-4404G>T
c.815-4404G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108145748
chrX:108145750 A
A
 G
G
 1 a0001c0001t0001g0138
a0001c0001t0001g0138
 1 NA18952.hp1
NA18952.hp1
 intron_variant MODIFIER c.815-4402A>G
c.815-4402A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108145750
chrX:108146070 G
G
 A
A
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.815-4082G>A
c.815-4082G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108146070
chrX:108146146 G
G
 A
A
 3 a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0105
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0105
 3 HG01169.hp2
HG03654.hp1
HG04115.hp1
HG01169.hp2
HG03654.hp1
HG04115.hp1
 intron_variant MODIFIER c.815-4006G>A
c.815-4006G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108146146
chrX:108146239 G
G
 T
T
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-3913G>T
c.815-3913G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108146239
chrX:108146346 G
G
 T
T
 1 a0001c0001t0001g0024
a0001c0001t0001g0024
 1 HG04184.hp1
HG04184.hp1
 intron_variant MODIFIER c.815-3806G>T
c.815-3806G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108146346
chrX:108146449 G
G
 T
T
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.815-3703G>T
c.815-3703G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108146449
chrX:108146478 T
T
 C
C
 13 a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
others(10): Show 
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0005g0163
 13 HG02451.hp2
HG02572.hp1
HG02717.hp1
others(10): Show 
HG02451.hp2
HG02572.hp1
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG06807.hp2
NA19030.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-3674T>C
c.815-3674T>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108146478
chrX:108146555 A
A
 G
G
 80 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(77): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 92 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(89): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-3597A>G
c.815-3597A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108146555
chrX:108146756 T
T
 G
G
 1 a0001c0001t0001g0074
a0001c0001t0001g0074
 1 HG01071.hp1
HG01071.hp1
 intron_variant MODIFIER c.815-3396T>G
c.815-3396T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108146756
chrX:108147685 A
A
 C
C
 1 a0001c0001t0001g0051
a0001c0001t0001g0051
 1 HG02809.hp1
HG02809.hp1
 intron_variant MODIFIER c.815-2467A>C
c.815-2467A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108147685
chrX:108148018 A
A
 T
T
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 NA18985.hp1
NA18985.hp1
 intron_variant MODIFIER c.815-2134A>T
c.815-2134A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108148018
chrX:108148019 AAAT
AAAT
 A
A
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG03710.hp1
HG03710.hp1
 intron_variant MODIFIER c.815-2131_815-2129d
others(5): Show 
c.815-2131_815-2129delATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148019
chrX:108148019 AAATATAT
others(4): Show 
AAATATATATAT
 A
A
 1 a0001c0001t0001g0042
a0001c0001t0001g0042
 1 NA19065.hp2
NA19065.hp2
 intron_variant MODIFIER c.815-2131_815-2121d
others(13): Show 
c.815-2131_815-2121delATATATATATA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148019
chrX:108148020 A
A
 AAT
AAT
 3 a0001c0001t0001g0007
a0001c0001t0001g0032
a0001c0001t0001g0136
a0001c0001t0001g0007
a0001c0001t0001g0032
a0001c0001t0001g0136
 4 HG01257.hp2
HG01258.hp1
HG03942.hp1
others(1): Show 
HG01257.hp2
HG01258.hp1
HG03942.hp1
NA20129.hp2
 intron_variant MODIFIER c.815-2077_815-2076d
others(4): Show 
c.815-2077_815-2076dupAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 A
A
 AATAT
AATAT
 3 a0001c0001t0001g0028
a0001c0001t0001g0072
a0001c0001t0001g0137
a0001c0001t0001g0028
a0001c0001t0001g0072
a0001c0001t0001g0137
 3 HG03225.hp1
NA18995.hp1
NA19089.hp1
HG03225.hp1
NA18995.hp1
NA19089.hp1
 intron_variant MODIFIER c.815-2079_815-2076d
others(6): Show 
c.815-2079_815-2076dupATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 A
A
 AATATAT
AATATAT
 7 a0001c0001t0001g0023
a0001c0001t0001g0027
a0001c0001t0001g0039
others(4): Show 
a0001c0001t0001g0023
a0001c0001t0001g0027
a0001c0001t0001g0039
a0001c0001t0001g0045
a0001c0001t0001g0060
a0001c0001t0001g0064
a0001c0001t0003g0150
 7 HG00323.hp2
HG00609.hp1
HG01099.hp1
others(4): Show 
HG00323.hp2
HG00609.hp1
HG01099.hp1
HG03017.hp1
HG03041.hp1
HG03490.hp1
NA19072.hp1
 intron_variant MODIFIER c.815-2081_815-2076d
others(8): Show 
c.815-2081_815-2076dupATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 A
A
 AATATATA
others(1): Show 
AATATATAT
 4 a0001c0001t0001g0038
a0001c0001t0001g0054
a0001c0001t0001g0059
others(1): Show 
a0001c0001t0001g0038
a0001c0001t0001g0054
a0001c0001t0001g0059
a0001c0001t0001g0127
 4 HG02622.hp2
HG02735.hp1
HG03195.hp1
others(1): Show 
HG02622.hp2
HG02735.hp1
HG03195.hp1
NA18983.hp1
 intron_variant MODIFIER c.815-2083_815-2076d
others(10): Show 
c.815-2083_815-2076dupATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 A
A
 AATATATA
others(3): Show 
AATATATATAT
 8 a0001c0001t0001g0033
a0001c0001t0001g0037
a0001c0001t0001g0044
others(5): Show 
a0001c0001t0001g0033
a0001c0001t0001g0037
a0001c0001t0001g0044
a0001c0001t0001g0051
a0001c0001t0001g0055
a0001c0001t0001g0061
a0001c0001t0001g0070
a0001c0001t0001g0071
 8 HG00099.hp1
HG01433.hp1
HG02071.hp1
others(5): Show 
HG00099.hp1
HG01433.hp1
HG02071.hp1
HG02630.hp1
HG02809.hp1
HG02818.hp2
NA19090.hp2
NA20300.hp2
 intron_variant MODIFIER c.815-2085_815-2076d
others(12): Show 
c.815-2085_815-2076dupATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 A
A
 AATATATA
others(7): Show 
AATATATATATATAT
 2 a0001c0001t0001g0067
a0001c0001t0001g0069
a0001c0001t0001g0067
a0001c0001t0001g0069
 2 HG02300.hp1
NA19060.hp1
HG02300.hp1
NA19060.hp1
 intron_variant MODIFIER c.815-2089_815-2076d
others(16): Show 
c.815-2089_815-2076dupATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 A
A
 AATATATA
others(9): Show 
AATATATATATATATAT
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG04184.hp2
HG04184.hp2
 intron_variant MODIFIER c.815-2091_815-2076d
others(18): Show 
c.815-2091_815-2076dupATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 A
A
 AATATATA
others(23): Show 
AATATATATATATATATATATATATATATAT
 1 a0001c0001t0001g0031
a0001c0001t0001g0031
 1 NA19005.hp1
NA19005.hp1
 intron_variant MODIFIER c.815-2105_815-2076d
others(32): Show 
c.815-2105_815-2076dupATATATATATATATATATATATATATAT
AT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 A
A
 T
T
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 NA18985.hp1
NA18985.hp1
 intron_variant MODIFIER c.815-2132A>T
c.815-2132A>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108148020
chrX:108148020 AAT
AAT
 A
A
 4 a0001c0001t0001g0008
a0001c0001t0001g0025
a0001c0001t0001g0026
others(1): Show 
a0001c0001t0001g0008
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0003g0151
 5 HG00558.hp2
HG01981.hp2
HG02723.hp2
others(2): Show 
HG00558.hp2
HG01981.hp2
HG02723.hp2
NA18948.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.815-2077_815-2076d
others(4): Show 
c.815-2077_815-2076delAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATAT
AATAT
 A
A
 4 a0001c0001t0001g0043
a0001c0001t0001g0068
a0001c0001t0003g0149
others(1): Show 
a0001c0001t0001g0043
a0001c0001t0001g0068
a0001c0001t0003g0149
a0001c0001t0004g0052
 4 HG01081.hp1
HG01516.hp2
HG02129.hp1
others(1): Show 
HG01081.hp1
HG01516.hp2
HG02129.hp1
NA19043.hp1
 intron_variant MODIFIER c.815-2079_815-2076d
others(6): Show 
c.815-2079_815-2076delATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATAT
AATATAT
 A
A
 3 a0001c0001t0001g0046
a0001c0001t0001g0050
a0001c0001t0001g0065
a0001c0001t0001g0046
a0001c0001t0001g0050
a0001c0001t0001g0065
 3 HG02027.hp1
NA18982.hp1
NA19058.hp1
HG02027.hp1
NA18982.hp1
NA19058.hp1
 intron_variant MODIFIER c.815-2081_815-2076d
others(8): Show 
c.815-2081_815-2076delATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(1): Show 
AATATATAT
 A
A
 4 a0001c0001t0001g0009
a0001c0001t0001g0057
a0001c0001t0001g0058
others(1): Show 
a0001c0001t0001g0009
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0066
 5 HG00642.hp1
HG00673.hp1
NA18955.hp1
others(2): Show 
HG00642.hp1
HG00673.hp1
NA18955.hp1
NA18971.hp1
NA18999.hp1
 intron_variant MODIFIER c.815-2083_815-2076d
others(10): Show 
c.815-2083_815-2076delATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(3): Show 
AATATATATAT
 A
A
 2 a0001c0001t0001g0036
a0001c0005t0001g0219
a0001c0001t0001g0036
a0001c0005t0001g0219
 2 HG02055.hp1
NA19000.hp1
HG02055.hp1
NA19000.hp1
 intron_variant MODIFIER c.815-2085_815-2076d
others(12): Show 
c.815-2085_815-2076delATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(5): Show 
AATATATATATAT
 A
A
 2 a0001c0001t0001g0056
a0001c0002t0001g0145
a0001c0001t0001g0056
a0001c0002t0001g0145
 2 HG01106.hp1
NA19091.hp1
HG01106.hp1
NA19091.hp1
 intron_variant MODIFIER c.815-2087_815-2076d
others(14): Show 
c.815-2087_815-2076delATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(7): Show 
AATATATATATATAT
 A
A
 2 a0001c0001t0001g0029
a0001c0001t0001g0034
a0001c0001t0001g0029
a0001c0001t0001g0034
 2 NA18965.hp1
NA19067.hp1
NA18965.hp1
NA19067.hp1
 intron_variant MODIFIER c.815-2089_815-2076d
others(16): Show 
c.815-2089_815-2076delATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(9): Show 
AATATATATATATATAT
 A
A
 7 a0001c0001t0001g0063
a0001c0001t0001g0126
a0001c0002t0001g0143
others(4): Show 
a0001c0001t0001g0063
a0001c0001t0001g0126
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01884.hp1
HG02257.hp2
HG02895.hp1
others(4): Show 
HG01884.hp1
HG02257.hp2
HG02895.hp1
HG02897.hp2
HG02965.hp1
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.815-2091_815-2076d
others(18): Show 
c.815-2091_815-2076delATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(11): Show 
AATATATATATATATATAT
 A
A
 1 a0001c0001t0001g0183
a0001c0001t0001g0183
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.815-2093_815-2076d
others(20): Show 
c.815-2093_815-2076delATATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(13): Show 
AATATATATATATATATATAT
 A
A
 5 a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0168
others(2): Show 
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0168
a0001c0001t0002g0178
a0001c0002t0001g0142
 5 HG01361.hp1
HG01884.hp2
HG02080.hp2
others(2): Show 
HG01361.hp1
HG01884.hp2
HG02080.hp2
HG02258.hp1
NA19006.hp1
 intron_variant MODIFIER c.815-2095_815-2076d
others(22): Show 
c.815-2095_815-2076delATATATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(15): Show 
AATATATATATATATATATATAT
 A
A
 2 a0001c0001t0002g0179
a0001c0001t0002g0182
a0001c0001t0002g0179
a0001c0001t0002g0182
 2 HG02109.hp1
HG02723.hp1
HG02109.hp1
HG02723.hp1
 intron_variant MODIFIER c.815-2097_815-2076d
others(24): Show 
c.815-2097_815-2076delATATATATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(17): Show 
AATATATATATATATATATATATAT
 A
A
 9 a0001c0001t0001g0152
a0001c0001t0001g0155
a0001c0001t0001g0157
others(6): Show 
a0001c0001t0001g0152
a0001c0001t0001g0155
a0001c0001t0001g0157
a0001c0001t0001g0162
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0177
a0001c0001t0002g0187
 11 HG01361.hp2
HG01975.hp2
HG01978.hp1
others(8): Show 
HG01361.hp2
HG01975.hp2
HG01978.hp1
HG03098.hp1
HG03831.hp1
NA18975.hp2
NA19010.hp1
NA19077.hp2
NA19240.hp1
NA20300.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-2099_815-2076d
others(26): Show 
c.815-2099_815-2076delATATATATATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(19): Show 
AATATATATATATATATATATATATAT
 A
A
 20 a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0159
others(17): Show 
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0164
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0005g0163
 20 HG00558.hp1
HG01081.hp2
HG02451.hp2
others(17): Show 
HG00558.hp1
HG01081.hp2
HG02451.hp2
HG02486.hp1
HG02818.hp1
HG02922.hp1
HG02922.hp2
HG03130.hp1
HG03195.hp2
HG03471.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19030.hp2
NA19056.hp1
NA19090.hp1
 intron_variant MODIFIER c.815-2101_815-2076d
others(28): Show 
c.815-2101_815-2076delATATATATATATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(21): Show 
AATATATATATATATATATATATATATAT
 A
A
 2 a0001c0001t0001g0156
a0001c0001t0001g0158
a0001c0001t0001g0156
a0001c0001t0001g0158
 2 HG02572.hp1
HG02717.hp1
HG02572.hp1
HG02717.hp1
 intron_variant MODIFIER c.815-2103_815-2076d
others(30): Show 
c.815-2103_815-2076delATATATATATATATATATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(27): Show 
AATATATATATATATATATATATATATATATATAT
 A
A
 1 a0001c0001t0001g0040
a0001c0001t0001g0040
 1 HG01175.hp2
HG01175.hp2
 intron_variant MODIFIER c.815-2109_815-2076d
others(36): Show 
c.815-2109_815-2076delATATATATATATATATATATATATATAT
ATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(29): Show 
AATATATATATATATATATATATATATATATATATAT
 A
A
 3 a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
 3 HG02622.hp1
HG03486.hp2
HG03540.hp1
HG02622.hp1
HG03486.hp2
HG03540.hp1
 intron_variant MODIFIER c.815-2111_815-2076d
others(38): Show 
c.815-2111_815-2076delATATATATATATATATATATATATATAT
ATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(31): Show 
AATATATATATATATATATATATATATATATATATATAT
 A
A
 34 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(31): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 44 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(41): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02056.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02809.hp2
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp2
HG04228.hp1
NA19082.hp1
NA19088.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.815-2113_815-2076d
others(40): Show 
c.815-2113_815-2076delATATATATATATATATATATATATATAT
ATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148020 AATATATA
others(33): Show 
AATATATATATATATATATATATATATATATATATATATAT
 A
A
 79 a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
others(76): Show 
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0041
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0086
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0095
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0004t0001g0021
 94 HG00423.hp2
HG00621.hp1
HG00639.hp2
others(91): Show 
HG00423.hp2
HG00621.hp1
HG00639.hp2
HG00733.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01123.hp1
HG01169.hp2
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01261.hp1
HG01358.hp1
HG01515.hp1
HG01517.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG02015.hp1
HG02040.hp1
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02145.hp1
HG02280.hp2
HG02559.hp2
HG02602.hp1
HG02683.hp2
HG02738.hp1
HG02897.hp1
HG02970.hp1
HG03041.hp2
HG03139.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03491.hp2
HG03516.hp1
HG03654.hp1
HG03669.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG04204.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18945.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18966.hp1
NA18970.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18999.hp2
NA19003.hp1
NA19004.hp1
NA19009.hp1
NA19010.hp2
NA19012.hp1
NA19055.hp1
NA19062.hp1
NA19065.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19076.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19240.hp2
NA20129.hp1
NA20905.hp1
NA21309.hp2
 intron_variant MODIFIER c.815-2115_815-2076d
others(42): Show 
c.815-2115_815-2076delATATATATATATATATATATATATATAT
ATATATATATAT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148020
chrX:108148027 A
A
 AT
AT
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 NA18985.hp1
NA18985.hp1
 intron_variant MODIFIER c.815-2124dupT
c.815-2124dupT
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148027
chrX:108148088 G
G
 A
A
 1 a0001c0001t0001g0069
a0001c0001t0001g0069
 1 NA19060.hp1
NA19060.hp1
 intron_variant MODIFIER c.815-2064G>A
c.815-2064G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108148088
chrX:108148467 C
C
 CA
CA
 57 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(54): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0016
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0131
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
 70 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(67): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01123.hp2
HG01167.hp1
HG01175.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02056.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02486.hp1
HG02559.hp1
HG02559.hp2
HG02683.hp1
HG02698.hp1
HG02723.hp1
HG02809.hp2
HG02922.hp1
HG02970.hp1
HG02970.hp2
HG03041.hp2
HG03139.hp1
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.815-1669dupA
c.815-1669dupA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148467
chrX:108148467 C
C
 CAA
CAA
 1 a0001c0001t0001g0193
a0001c0001t0001g0193
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.815-1670_815-1669d
others(4): Show 
c.815-1670_815-1669dupAA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148467
chrX:108148467 CA
CA
 C
C
 2 a0001c0001t0001g0023
a0001c0001t0001g0102
a0001c0001t0001g0023
a0001c0001t0001g0102
 2 HG00323.hp2
HG01943.hp1
HG00323.hp2
HG01943.hp1
 intron_variant MODIFIER c.815-1669delA
c.815-1669delA
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148467
chrX:108148517 T
T
 TAC
TAC
 16 a0001c0001t0001g0024
a0001c0001t0001g0089
a0001c0001t0001g0090
others(13): Show 
a0001c0001t0001g0024
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0097
a0001c0001t0001g0133
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 16 HG01106.hp1
HG01884.hp1
HG02015.hp1
others(13): Show 
HG01106.hp1
HG01884.hp1
HG02015.hp1
HG02258.hp1
HG02723.hp2
HG02895.hp1
HG02897.hp2
HG02965.hp1
HG03041.hp1
HG03579.hp1
HG04184.hp1
NA18960.hp1
NA18989.hp1
NA19030.hp1
NA19043.hp1
NA19079.hp1
 intron_variant MODIFIER c.815-1606_815-1605d
others(4): Show 
c.815-1606_815-1605dupAC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148517
chrX:108148517 T
T
 TACAC
TACAC
 2 a0001c0001t0001g0051
a0001c0001t0001g0082
a0001c0001t0001g0051
a0001c0001t0001g0082
 2 HG02809.hp1
HG02897.hp1
HG02809.hp1
HG02897.hp1
 intron_variant MODIFIER c.815-1608_815-1605d
others(6): Show 
c.815-1608_815-1605dupACAC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148517
chrX:108148517 TAC
TAC
 T
T
 66 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(63): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0005g0163
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 78 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(75): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02630.hp2
HG02717.hp1
HG02723.hp1
HG02809.hp2
HG02818.hp1
HG02922.hp1
HG02922.hp2
HG02970.hp2
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp2
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-1606_815-1605d
others(4): Show 
c.815-1606_815-1605delAC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148517
chrX:108148517 TACAC
TACAC
 T
T
 16 a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0033
others(13): Show 
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0039
a0001c0001t0001g0044
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0054
a0001c0001t0001g0067
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
 16 HG00099.hp1
HG01099.hp1
HG01361.hp1
others(13): Show 
HG00099.hp1
HG01099.hp1
HG01361.hp1
HG02071.hp1
HG02300.hp1
NA18965.hp1
NA18983.hp1
NA18985.hp1
NA19005.hp1
NA19006.hp1
NA19058.hp1
NA19060.hp1
NA19067.hp1
NA19072.hp1
NA19090.hp2
NA20300.hp2
 intron_variant MODIFIER c.815-1608_815-1605d
others(6): Show 
c.815-1608_815-1605delACAC
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108148517
chrX:108148531 C
C
 G
G
 2 a0001c0001t0001g0087
a0001c0001t0001g0162
a0001c0001t0001g0087
a0001c0001t0001g0162
 2 HG01256.hp1
HG03098.hp1
HG01256.hp1
HG03098.hp1
 intron_variant MODIFIER c.815-1621C>G
c.815-1621C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108148531
chrX:108148562 G
G
 A
A
 1 a0001c0001t0002g0174
a0001c0001t0002g0174
 1 HG00558.hp1
HG00558.hp1
 intron_variant MODIFIER c.815-1590G>A
c.815-1590G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108148562
chrX:108149358 G
G
 C
C
 84 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(81): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 96 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(93): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-794G>C
c.815-794G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108149358
chrX:108149736 C
C
 G
G
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.815-416C>G
c.815-416C>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108149736
chrX:108149917 G
G
 T
T
 213 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(210): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0027
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0044
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0086
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0095
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0133
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0136
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0004g0052
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0004t0001g0021
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 241 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(238): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00423.hp2
HG00558.hp1
HG00558.hp2
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01358.hp1
HG01361.hp1
HG01361.hp2
HG01515.hp1
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02602.hp1
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03710.hp1
HG03831.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18975.hp1
NA18975.hp2
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18999.hp1
NA18999.hp2
NA19000.hp1
NA19003.hp1
NA19003.hp2
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp1
NA20129.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.815-235G>T
c.815-235G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108149917
chrX:108150100 T
T
 TG
TG
 84 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(81): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 96 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(93): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.815-49dupG
c.815-49dupG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 INFO_REALIGN_3_PRIME chrX 108150100
chrX:108150112 G
G
 A
A
 7 a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
others(4): Show 
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
 7 HG01106.hp1
HG01884.hp1
HG02258.hp1
others(4): Show 
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02895.hp1
HG02897.hp2
HG02965.hp1
NA19030.hp1
 intron_variant MODIFIER c.815-40G>A
c.815-40G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 9/12 chrX 108150112
chrX:108150695 A
A
 G
G
 1 a0001c0001t0001g0124
a0001c0001t0001g0124
 1 HG01981.hp1
HG01981.hp1
 intron_variant MODIFIER c.960+398A>G
c.960+398A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108150695
chrX:108150697 A
A
 G
G
 2 a0001c0001t0001g0107
a0001c0001t0001g0117
a0001c0001t0001g0107
a0001c0001t0001g0117
 2 HG00621.hp1
NA18940.hp1
HG00621.hp1
NA18940.hp1
 intron_variant MODIFIER c.960+400A>G
c.960+400A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108150697
chrX:108151010 A
A
 G
G
 1 a0001c0001t0001g0130
a0001c0001t0001g0130
 1 HG03239.hp1
HG03239.hp1
 intron_variant MODIFIER c.960+713A>G
c.960+713A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108151010
chrX:108151069 G
G
 C
C
 1 a0001c0001t0002g0176
a0001c0001t0002g0176
 1 NA18984.hp1
NA18984.hp1
 intron_variant MODIFIER c.961-733G>C
c.961-733G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108151069
chrX:108151085 G
G
 C
C
 1 a0001c0001t0001g0098
a0001c0001t0001g0098
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.961-717G>C
c.961-717G>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108151085
chrX:108151141 G
G
 A
A
 34 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(31): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 44 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(41): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01516.hp1
HG01517.hp1
HG02056.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02280.hp1
HG02451.hp1
HG02559.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02809.hp2
HG02970.hp2
HG03209.hp1
HG03453.hp2
HG03486.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03669.hp2
HG03688.hp1
HG03831.hp2
HG04228.hp1
NA19082.hp1
NA19088.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.961-661G>A
c.961-661G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108151141
chrX:108151241 C
C
 T
T
 2 a0001c0001t0002g0178
a0001c0001t0002g0187
a0001c0001t0002g0178
a0001c0001t0002g0187
 2 HG01361.hp2
HG01884.hp2
HG01361.hp2
HG01884.hp2
 intron_variant MODIFIER c.961-561C>T
c.961-561C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108151241
chrX:108151335 A
A
 C
C
 84 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(81): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 96 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(93): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.961-467A>C
c.961-467A>C
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108151335
chrX:108151712 AG
AG
 A
A
 1 a0001c0001t0001g0055
a0001c0001t0001g0055
 1 HG02630.hp1
HG02630.hp1
 intron_variant MODIFIER c.961-89delG
c.961-89delG
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 10/12 chrX 108151712
chrX:108151871 G
G
 T
T
 1 a0001c0001t0001g0095
a0001c0001t0001g0095
 1 NA19004.hp1
NA19004.hp1
 intron_variant MODIFIER c.1017+13G>T
c.1017+13G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 11/12 chrX 108151871
chrX:108151888 A
A
 G
G
 1 a0001c0001t0001g0183
a0001c0001t0001g0183
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.1017+30A>G
c.1017+30A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 11/12 chrX 108151888
chrX:108152017 T
T
 G
G
 1 a0001c0001t0001g0047
a0001c0001t0001g0047
 1 NA19006.hp1
NA19006.hp1
 intron_variant MODIFIER c.1017+159T>G
c.1017+159T>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 11/12 chrX 108152017
chrX:108152029 C
C
 T
T
 4 a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
others(1): Show 
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
 4 HG02723.hp2
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02723.hp2
HG03041.hp1
HG03579.hp1
NA19043.hp1
 intron_variant MODIFIER c.1017+171C>T
c.1017+171C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 11/12 chrX 108152029
chrX:108152030 G
G
 A
A
 1 a0001c0001t0001g0124
a0001c0001t0001g0124
 1 HG01981.hp1
HG01981.hp1
 intron_variant MODIFIER c.1017+172G>A
c.1017+172G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 11/12 chrX 108152030
chrX:108152034 A
A
 G
G
 84 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(81): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 96 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(93): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1017+176A>G
c.1017+176A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 11/12 chrX 108152034
chrX:108152271 G
G
 A
A
 1 a0002c0003t0001g0205
a0002c0003t0001g0205
 1 HG02280.hp1
HG02280.hp1
 intron_variant MODIFIER c.1017+413G>A
c.1017+413G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 11/12 chrX 108152271
chrX:108152752 C
C
 T
T
 1 a0001c0001t0001g0004
a0001c0001t0001g0004
 3 HG01255.hp1
HG01358.hp1
HG03669.hp1
HG01255.hp1
HG01358.hp1
HG03669.hp1
 intron_variant MODIFIER c.1018-227C>T
c.1018-227C>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 11/12 chrX 108152752
chrX:108153135 G
G
 A
A
 83 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(80): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0154
a0001c0001t0001g0155
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0002g0017
a0001c0001t0002g0018
a0001c0001t0002g0170
a0001c0001t0002g0171
a0001c0001t0002g0172
a0001c0001t0002g0173
a0001c0001t0002g0174
a0001c0001t0002g0175
a0001c0001t0002g0176
a0001c0001t0002g0177
a0001c0001t0002g0178
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0187
a0001c0001t0002g0188
a0001c0001t0002g0189
a0001c0001t0002g0190
a0001c0001t0003g0149
a0001c0001t0003g0150
a0001c0001t0003g0151
a0001c0001t0003g0185
a0001c0001t0005g0163
a0001c0002t0001g0142
a0001c0002t0001g0143
a0001c0002t0001g0144
a0001c0002t0001g0145
a0001c0002t0001g0146
a0001c0002t0001g0147
a0001c0002t0001g0148
a0001c0005t0001g0219
a0002c0003t0001g0204
a0002c0003t0001g0205
a0002c0003t0001g0213
a0002c0003t0001g0214
 95 HG00099.hp2
HG00140.hp1
HG00280.hp1
others(92): Show 
HG00099.hp2
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00423.hp1
HG00558.hp1
HG00639.hp1
HG00733.hp2
HG00738.hp1
HG00741.hp1
HG01081.hp2
HG01106.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01175.hp1
HG01243.hp1
HG01257.hp1
HG01361.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01975.hp2
HG01978.hp1
HG02055.hp1
HG02056.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02135.hp1
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03831.hp1
HG03831.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18944.hp1
NA18975.hp2
NA18984.hp1
NA19003.hp2
NA19007.hp1
NA19010.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19056.hp1
NA19077.hp2
NA19082.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1126+48G>A
c.1126+48G>A
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 12/12 chrX 108153135
chrX:108153310 A
A
 G
G
 2 a0001c0001t0001g0116
a0001c0001t0001g0130
a0001c0001t0001g0116
a0001c0001t0001g0130
 2 HG01192.hp1
HG03239.hp1
HG01192.hp1
HG03239.hp1
 intron_variant MODIFIER c.1126+223A>G
c.1126+223A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 12/12 chrX 108153310
chrX:108153552 G
G
 T
T
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG04184.hp2
HG04184.hp2
 intron_variant MODIFIER c.1127-90G>T
c.1127-90G>T
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 12/12 chrX 108153552
chrX:108153599 A
A
 G
G
 7 a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
others(4): Show 
a0001c0001t0002g0179
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0182
a0001c0001t0002g0184
a0001c0001t0002g0186
a0001c0001t0002g0189
 7 HG02109.hp1
HG02486.hp1
HG02723.hp1
others(4): Show 
HG02109.hp1
HG02486.hp1
HG02723.hp1
HG02922.hp1
HG03471.hp1
HG06807.hp1
NA18522.hp1
 intron_variant MODIFIER c.1127-43A>G
c.1127-43A>G
ATG4A ENSG00000101844.18 transcript ENST00000372232.8 protein_coding 12/12 chrX 108153599

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

IGV Connection Help

IGV must be running on your computer before clicking the button.

If your browser shows the "cannot open the page" error, launch IGV and allow access via port 60151:

  1. Open IGV on your computer
  2. In IGV's menu bar: View → Preferences…
  3. Click on the "Advanced" tab
  4. Check "Enable port"
  5. Set the port number to 60151
  6. Click OK to save

For more details, please refer to Information → FAQ.