Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	55997
ensemblid	ENSG00000136698.10
hgncid	18292
symbol	CFC1
name	cripto, FRL-1, cryptic family 1
refseq_nuc	NM_032545.4
refseq_prot	NP_115934.1
ensembl_nuc	ENST00000259216.6
ensembl_prot	ENSP00000259216.5
mane_status	MANE Select
chr	chr2
start	130592165
end	130599575
strand	-
ver	v1.2
region	chr2:130592165-130599575
region5000	chr2:130587165-130604575
regionname0	CFC1_chr2_130592165_130599575
regionname5000	CFC1_chr2_130587165_130604575

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	223	227	28	38	126	9	26	98	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0002	0/0	223	4	0	2	1	1	0	1	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0003	0/0	223	3	1	2	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0004	0/0	223	2	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0005	0/0	223	2	2	0	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0006	0/0	223	2	0	2	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0007	0/0	223	1	0	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0008	0/0	223	1	0	0	1	0	0	1	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	672	218	24	38	121	9	26	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0002	0/0	672	4	0	2	1	1	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0003	0/0	672	3	1	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0004	0/0	672	3	3	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0005	0/0	672	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0006	0/0	672	2	0	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0007	0/0	672	2	1	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0008	0/0	672	2	2	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0009	0/0	672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0010	0/0	672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0011	0/0	672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0012	0/0	672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0013	0/0	672	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
c0014	0/0	672	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	1001	221	23	40	123	9	26	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
t0002	0/0	1001	11	4	5	1	1	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
t0003	0/0	1001	2	2	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
t0004	0/0	1001	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
t0005	0/0	1001	2	1	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
t0006	0/0	1001	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
t0007	0/0	1001	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
t0008	0/0	1001	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
t0009	0/0	1001	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	128	12	28	61	7	20	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0002	0/0	24	3	3	17	0	1	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0003	0/0	10	0	0	9	0	1	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0004	0/0	10	0	0	8	0	2	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0005	0/0	7	3	0	3	1	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0006	0/0	6	0	0	6	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0007	0/0	3	0	2	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0008	0/0	2	1	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0009	0/0	2	2	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0010	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0011	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0012	0/0	2	0	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0013	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0014	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0015	0/0	2	0	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0016	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0017	0/0	2	1	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0018	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0019	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0020	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0021	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0022	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0023	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0024	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0025	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0026	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0027	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0028	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0029	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0030	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0031	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0032	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0033	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0034	0/0	1	0	0	0	1	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0035	0/0	1	0	0	0	0	1	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0036	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0037	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0038	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0039	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0040	0/0	1	0	0	0	0	1	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0041	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0042	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0043	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0044	0/0	1	0	0	0	1	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0045	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0046	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0047	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0048	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0049	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0050	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
g0051	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	672	218	24	38	121	9	26	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0004	0/0	672	3	3	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0005	0/0	672	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0009	0/0	672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0011	0/0	672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0012	0/0	672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0014	0/0	672	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0002c0002	0/0	672	4	0	2	1	1	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0003c0003	0/0	672	3	1	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0004c0007	0/0	672	2	1	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0005c0008	0/0	672	2	2	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0006c0006	0/0	672	2	0	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0007c0013	0/0	672	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0008c0010	0/0	672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1672	211	22	37	117	9	26	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0001t0002	0/0	1672	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0001t0004	0/0	1672	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0001t0006	0/0	1672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0001t0007	0/0	1672	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0001t0008	0/0	1672	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0001t0009	0/0	1672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0004t0002	0/0	1672	3	3	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0005t0001	0/0	1672	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0009t0001	0/0	1672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0011t0001	0/0	1672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0012t0001	0/0	1672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0001c0014t0001	0/0	1672	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0002c0002t0002	0/0	1672	4	0	2	1	1	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0003c0003t0002	0/0	1672	3	1	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0004c0007t0005	0/0	1672	2	1	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0005c0008t0003	0/0	1672	2	2	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0006c0006t0001	0/0	1672	2	0	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0007c0013t0001	0/0	1672	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575
a0008c0010t0001	0/0	1672	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	copy fasta	chr2	130587165	130604575

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	128	12	28	61	7	20	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0002	0/0	24	3	3	17	0	1	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0003	0/0	10	0	0	9	0	1	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0004	0/0	10	0	0	8	0	2	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0005	0/0	7	3	0	3	1	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0006	0/0	6	0	0	6	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0013	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0014	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0015	0/0	2	0	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0016	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0023	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0024	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0025	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0026	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0027	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0029	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0031	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0032	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0033	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0034	0/0	1	0	0	0	1	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0035	0/0	1	0	0	0	0	1	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0036	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0037	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0040	0/0	1	0	0	0	0	1	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0041	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0042	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0046	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0002g0038	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0004g0011	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0006g0045	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0007g0047	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0008g0050	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0001t0009g0051	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0004t0002g0020	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0004t0002g0021	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0004t0002g0022	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0005t0001g0010	0/0	2	0	0	2	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0009t0001g0018	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0011t0001g0030	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0012t0001g0028	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0001c0014t0001g0049	0/0	1	1	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0002c0002t0002g0007	0/0	3	0	2	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0002c0002t0002g0044	0/0	1	0	0	0	1	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0003c0003t0002g0008	0/0	2	1	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0003c0003t0002g0019	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0004c0007t0005g0017	0/0	2	1	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0005c0008t0003g0009	0/0	2	2	0	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0006c0006t0001g0012	0/0	2	0	2	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0007c0013t0001g0039	0/0	1	0	1	0	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
a0008c0010t0001g0043	0/0	1	0	0	1	0	0	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00438	hp1	a0001	c0001	t0001	g0003	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00438	hp2	a0001	c0001	t0001	g0004	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00558	hp1	a0001	c0001	t0001	g0032	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00558	hp2	a0001	c0001	t0001	g0006	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00621	hp2	a0001	c0001	t0001	g0042	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00639	hp2	a0001	c0001	t0001	g0031	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01069	hp1	a0002	c0002	t0002	g0007	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01069	hp2	a0006	c0006	t0001	g0012	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01071	hp2	a0006	c0006	t0001	g0012	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01106	hp1	a0002	c0002	t0002	g0007	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01169	hp2	a0007	c0013	t0001	g0039	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01175	hp1	a0003	c0003	t0002	g0008	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01175	hp2	a0001	c0001	t0001	g0015	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01192	hp2	a0001	c0001	t0001	g0036	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01243	hp1	a0003	c0003	t0002	g0019	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01257	hp2	a0004	c0007	t0005	g0017	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01261	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01346	hp1	a0001	c0001	t0001	g0015	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01346	hp2	a0001	c0001	t0002	g0038	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01496	hp1	a0001	c0001	t0001	g0027	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01517	hp1	a0002	c0002	t0002	g0044	EUR	IBS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG01981	hp2	a0001	c0001	t0001	g0029	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02015	hp1	a0001	c0001	t0001	g0037	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02027	hp1	a0001	c0001	t0001	g0006	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02027	hp2	a0001	c0001	t0001	g0004	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02071	hp1	a0001	c0001	t0001	g0013	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02071	hp2	a0001	c0001	t0001	g0004	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02074	hp2	a0001	c0001	t0001	g0016	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02132	hp2	a0001	c0001	t0001	g0003	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02135	hp1	a0001	c0001	t0001	g0004	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02148	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02165	hp1	a0001	c0001	t0001	g0006	EAS	CDX	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02523	hp1	a0001	c0001	t0001	g0002	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02572	hp1	a0001	c0001	t0001	g0048	AFR	GWD	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02572	hp2	a0001	c0001	t0001	g0046	AFR	GWD	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02602	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02615	hp1	a0001	c0001	t0001	g0023	AFR	GWD	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02615	hp2	a0001	c0001	t0001	g0005	AFR	GWD	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02622	hp2	a0004	c0007	t0005	g0017	AFR	GWD	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02895	hp2	a0005	c0008	t0003	g0009	AFR	GWD	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02970	hp1	a0001	c0001	t0007	g0047	AFR	ESN	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02970	hp2	a0001	c0014	t0001	g0049	AFR	ESN	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03098	hp1	a0005	c0008	t0003	g0009	AFR	MSL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03098	hp2	a0001	c0004	t0002	g0021	AFR	MSL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03139	hp1	a0001	c0001	t0001	g0005	AFR	ESN	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03139	hp2	a0001	c0004	t0002	g0020	AFR	ESN	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03486	hp2	a0001	c0001	t0001	g0002	AFR	MSL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03579	hp1	a0001	c0001	t0001	g0024	AFR	MSL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03579	hp2	a0001	c0001	t0001	g0002	AFR	MSL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03654	hp1	a0001	c0001	t0001	g0035	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03834	hp1	a0001	c0001	t0001	g0003	SAS	BEB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03834	hp2	a0001	c0001	t0001	g0004	SAS	BEB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG04199	hp1	a0001	c0001	t0001	g0040	SAS	STU	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG04199	hp2	a0001	c0001	t0001	g0004	SAS	STU	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18612	hp1	a0001	c0001	t0001	g0013	EAS	CHB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18612	hp2	a0001	c0001	t0001	g0006	EAS	CHB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18946	hp1	a0001	c0001	t0001	g0006	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18946	hp2	a0001	c0001	t0001	g0016	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18947	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18948	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18954	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18956	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18960	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18966	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18971	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18979	hp2	a0001	c0001	t0001	g0033	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18981	hp1	a0001	c0005	t0001	g0010	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18982	hp2	a0001	c0001	t0001	g0041	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18984	hp1	a0001	c0001	t0009	g0051	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18986	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18994	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18995	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18995	hp2	a0001	c0001	t0001	g0004	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18997	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18997	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18998	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18998	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18999	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19000	hp2	a0001	c0001	t0001	g0025	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19003	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19007	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19007	hp2	a0001	c0012	t0001	g0028	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19010	hp1	a0001	c0001	t0006	g0045	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19012	hp1	a0001	c0009	t0001	g0018	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19057	hp1	a0001	c0001	t0001	g0026	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19057	hp2	a0001	c0001	t0001	g0004	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19058	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19060	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19062	hp1	a0002	c0002	t0002	g0007	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19062	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19065	hp2	a0001	c0001	t0001	g0014	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19066	hp2	a0001	c0011	t0001	g0030	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19067	hp1	a0001	c0001	t0001	g0006	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19067	hp2	a0001	c0001	t0001	g0014	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19068	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19070	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19072	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19072	hp2	a0001	c0001	t0001	g0004	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19075	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19075	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19078	hp1	a0001	c0001	t0004	g0011	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19078	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19080	hp1	a0001	c0001	t0001	g0004	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19080	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19082	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19082	hp2	a0008	c0010	t0001	g0043	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19087	hp2	a0001	c0005	t0001	g0010	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19090	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19091	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA19091	hp2	a0001	c0001	t0004	g0011	EAS	JPT	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA20129	hp1	a0003	c0003	t0002	g0008	AFR	ASW	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA20129	hp2	a0001	c0001	t0008	g0050	AFR	ASW	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA20805	hp1	a0001	c0001	t0001	g0005	EUR	TSI	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA20805	hp2	a0001	c0001	t0001	g0034	EUR	TSI	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02109	hp2	a0001	c0001	t0001	g0005	AFR	ACB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02486	hp1	a0001	c0004	t0002	g0022	AFR	ACB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03471	hp1	a0001	c0001	t0001	g0002	AFR	MSL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	CFC1_chr2_130587165_130604575	CFC1	chr2	130587165	130604575

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr2:130592918	G G	A A	1	a0006 a0006	2	HG01069.hp2 HG01071.hp2 HG01069.hp2 HG01071.hp2	missense_variant	MODERATE	c.631C>T c.631C>T	p.Arg211Trp p.Arg211Trp	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	919/1672	631/672	211/223	chr2	130592918
chr2:130597515	G G	A A	1	a0007 a0007	1	HG01169.hp2 HG01169.hp2	missense_variant	MODERATE	c.451C>T c.451C>T	p.Leu151Phe p.Leu151Phe	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/6	739/1672	451/672	151/223	chr2	130597515
chr2:130597533	C C	T T	1	a0002 a0002	4	HG01069.hp1 HG01106.hp1 HG01517.hp1 others(1): Show HG01069.hp1 HG01106.hp1 HG01517.hp1 NA19062.hp1	missense_variant	MODERATE	c.433G>A c.433G>A	p.Ala145Thr p.Ala145Thr	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/6	721/1672	433/672	145/223	chr2	130597533
chr2:130597536	C C	G G	1	a0008 a0008	1	NA19082.hp2 NA19082.hp2	missense_variant	MODERATE	c.430G>C c.430G>C	p.Gly144Arg p.Gly144Arg	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/6	718/1672	430/672	144/223	chr2	130597536
chr2:130598749	C C	T T	2	a0003 a0004 a0003 a0004	5	HG01175.hp1 HG01243.hp1 HG01257.hp2 others(2): Show HG01175.hp1 HG01243.hp1 HG01257.hp2 HG02622.hp2 NA20129.hp1	missense_variant	MODERATE	c.140G>A c.140G>A	p.Arg47Gln p.Arg47Gln	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/6	428/1672	140/672	47/223	chr2	130598749
chr2:130598922	T T	G G	2	a0004 a0005 a0004 a0005	4	HG01257.hp2 HG02622.hp2 HG02895.hp2 others(1): Show HG01257.hp2 HG02622.hp2 HG02895.hp2 HG03098.hp1	missense_variant	MODERATE	c.61A>C c.61A>C	p.Asn21His p.Asn21His	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	2/6	349/1672	61/672	21/223	chr2	130598922

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr2:130592883	G G	T T	1	a0001c0011 a0001c0011	1	NA19066.hp2 NA19066.hp2	synonymous_variant	LOW	c.666C>A c.666C>A	p.Arg222Arg p.Arg222Arg	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	954/1672	666/672	222/223	chr2	130592883
chr2:130592943	C C	G G	2	a0001c0004 a0003c0003 a0001c0004 a0003c0003	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	synonymous_variant	LOW	c.606G>C c.606G>C	p.Leu202Leu p.Leu202Leu	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	894/1672	606/672	202/223	chr2	130592943
chr2:130592961	G G	T T	2	a0004c0007 a0005c0008 a0004c0007 a0005c0008	4	HG01257.hp2 HG02622.hp2 HG02895.hp2 others(1): Show HG01257.hp2 HG02622.hp2 HG02895.hp2 HG03098.hp1	synonymous_variant	LOW	c.588C>A c.588C>A	p.Pro196Pro p.Pro196Pro	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	876/1672	588/672	196/223	chr2	130592961
chr2:130593057	G G	C C	1	a0001c0012 a0001c0012	1	NA19007.hp2 NA19007.hp2	synonymous_variant	LOW	c.492C>G c.492C>G	p.Ala164Ala p.Ala164Ala	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	780/1672	492/672	164/223	chr2	130593057
chr2:130598658	G G	A A	1	a0001c0014 a0001c0014	1	HG02970.hp2 HG02970.hp2	synonymous_variant	LOW	c.231C>T c.231C>T	p.Ser77Ser p.Ser77Ser	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/6	519/1672	231/672	77/223	chr2	130598658
chr2:130598920	A A	G G	2	a0001c0004 a0003c0003 a0001c0004 a0003c0003	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	synonymous_variant	LOW	c.63T>C c.63T>C	p.Asn21Asn p.Asn21Asn	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	2/6	351/1672	63/672	21/223	chr2	130598920
chr2:130598959	C C	T T	1	a0001c0005 a0001c0005	2	NA18981.hp1 NA19087.hp2 NA18981.hp1 NA19087.hp2	splice_region_variant&synonymous_variant	LOW	c.24G>A c.24G>A	p.Arg8Arg p.Arg8Arg	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	2/6	312/1672	24/672	8/223	chr2	130598959
chr2:130599270	A A	G G	1	a0001c0009 a0001c0009	1	NA19012.hp1 NA19012.hp1	synonymous_variant	LOW	c.18T>C c.18T>C	p.His6His p.His6His	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	1/6	306/1672	18/672	6/223	chr2	130599270

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr2:130592298	T T	C C	2	a0004c0007t0005 a0005c0008t0003 a0004c0007t0005 a0005c0008t0003	4	HG01257.hp2 HG02622.hp2 HG02895.hp2 others(1): Show HG01257.hp2 HG02622.hp2 HG02895.hp2 HG03098.hp1	3_prime_UTR_variant	MODIFIER	c.579A>G c.579A>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	579	chr2	130592298
chr2:130592299	A A	G G	6	a0001c0001t0002 a0001c0004t0002 a0002c0002t0002 others(3): Show a0001c0001t0002 a0001c0004t0002 a0002c0002t0002 a0003c0003t0002 a0004c0007t0005 a0005c0008t0003	15	HG01069.hp1 HG01106.hp1 HG01175.hp1 others(12): Show HG01069.hp1 HG01106.hp1 HG01175.hp1 HG01243.hp1 HG01257.hp2 HG01346.hp2 HG01517.hp1 HG02486.hp1 HG02622.hp2 HG02895.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 NA19062.hp1 NA20129.hp1	3_prime_UTR_variant	MODIFIER	c.578T>C c.578T>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	578	chr2	130592299
chr2:130592314	A A	G G	2	a0004c0007t0005 a0005c0008t0003 a0004c0007t0005 a0005c0008t0003	4	HG01257.hp2 HG02622.hp2 HG02895.hp2 others(1): Show HG01257.hp2 HG02622.hp2 HG02895.hp2 HG03098.hp1	3_prime_UTR_variant	MODIFIER	c.563T>C c.563T>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	563	chr2	130592314
chr2:130592326	G G	A A	1	a0001c0001t0004 a0001c0001t0004	2	NA19078.hp1 NA19091.hp2 NA19078.hp1 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.551C>T c.551C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	551	chr2	130592326
chr2:130592467	G G	C C	2	a0001c0001t0007 a0004c0007t0005 a0001c0001t0007 a0004c0007t0005	3	HG01257.hp2 HG02622.hp2 HG02970.hp1 HG01257.hp2 HG02622.hp2 HG02970.hp1	3_prime_UTR_variant	MODIFIER	c.410C>G c.410C>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	410	chr2	130592467
chr2:130592768	C C	G G	1	a0001c0001t0006 a0001c0001t0006	1	NA19010.hp1 NA19010.hp1	3_prime_UTR_variant	MODIFIER	c.109G>C c.109G>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	6/6	109	chr2	130592768
chr2:130599297	G G	C C	1	a0001c0001t0008 a0001c0001t0008	1	NA20129.hp2 NA20129.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-10C>G c.-10C>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	1/6		chr2	130599297
chr2:130599526	G G	A A	1	a0001c0001t0009 a0001c0001t0009	1	NA18984.hp1 NA18984.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-239C>T c.-239C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	1/6		chr2	130599526

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr2:130593150	G G	C C	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	HG03579.hp1 HG03579.hp1	intron_variant	MODIFIER	c.473-74C>G c.473-74C>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593150
chr2:130593209	G G	A A	5	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(2): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.473-133C>T c.473-133C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593209
chr2:130593326	AG AG	A A	5	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(2): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.473-251delC c.473-251delC	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593326
chr2:130593329	G G	T T	1	a0001c0004t0002g0022 a0001c0004t0002g0022	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.473-253C>A c.473-253C>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593329
chr2:130593349	C C	T T	5	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(2): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.473-273G>A c.473-273G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593349
chr2:130593388	C C	T T	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	NA19057.hp1 NA19057.hp1	intron_variant	MODIFIER	c.473-312G>A c.473-312G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593388
chr2:130593465	G G	A A	7	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0004t0002g0020 others(4): Show a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019	8	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(5): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG02572.hp1 HG02572.hp2 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.473-389C>T c.473-389C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593465
chr2:130593507	C C	T T	3	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047	3	HG02572.hp1 HG02572.hp2 HG02970.hp1 HG02572.hp1 HG02572.hp2 HG02970.hp1	intron_variant	MODIFIER	c.473-431G>A c.473-431G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593507
chr2:130593604	C C	T T	5	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(2): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.473-528G>A c.473-528G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593604
chr2:130593608	G G	A A	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG01981.hp2 HG01981.hp2	intron_variant	MODIFIER	c.473-532C>T c.473-532C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593608
chr2:130593689	G G	A A	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG01496.hp1 HG01496.hp1	intron_variant	MODIFIER	c.473-613C>T c.473-613C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593689
chr2:130593787	C C	T T	3	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047	3	HG02572.hp1 HG02572.hp2 HG02970.hp1 HG02572.hp1 HG02572.hp2 HG02970.hp1	intron_variant	MODIFIER	c.473-711G>A c.473-711G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593787
chr2:130593822	G G	C C	11	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0015 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0002g0038 a0001c0001t0008g0050 a0001c0011t0001g0030 a0001c0014t0001g0049 a0002c0002t0002g0007 a0007c0013t0001g0039	43	HG01069.hp1 HG01106.hp1 HG01169.hp2 others(40): Show HG01069.hp1 HG01106.hp1 HG01169.hp2 HG01175.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01496.hp1 HG01975.hp1 HG02109.hp2 HG02148.hp2 HG02523.hp1 HG02602.hp1 HG02615.hp2 HG02970.hp2 HG03139.hp1 HG03471.hp1 HG03486.hp2 HG03579.hp2 NA18947.hp2 NA18948.hp1 NA18954.hp1 NA18960.hp2 NA18966.hp1 NA18971.hp2 NA18986.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA19000.hp2 NA19003.hp2 NA19007.hp1 NA19058.hp1 NA19060.hp2 NA19062.hp1 NA19066.hp2 NA19068.hp1 NA19072.hp1 NA19075.hp1 NA19080.hp2 NA19090.hp1 NA20129.hp2 NA20805.hp1	intron_variant	MODIFIER	c.473-746C>G c.473-746C>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593822
chr2:130593869	A A	G G	2	a0001c0001t0001g0006 a0001c0001t0004g0011 a0001c0001t0001g0006 a0001c0001t0004g0011	8	HG00558.hp2 HG02027.hp1 HG02165.hp1 others(5): Show HG00558.hp2 HG02027.hp1 HG02165.hp1 NA18612.hp2 NA18946.hp1 NA19067.hp1 NA19078.hp1 NA19091.hp2	intron_variant	MODIFIER	c.473-793T>C c.473-793T>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593869
chr2:130593945	G G	A A	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.473-869C>T c.473-869C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130593945
chr2:130594232	ACC ACC	A A	12	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 others(9): Show a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0002c0002t0002g0007 a0002c0002t0002g0044 a0003c0003t0002g0008 a0003c0003t0002g0019 a0004c0007t0005g0017 a0005c0008t0003g0009	17	HG01069.hp1 HG01106.hp1 HG01175.hp1 others(14): Show HG01069.hp1 HG01106.hp1 HG01175.hp1 HG01243.hp1 HG01257.hp2 HG01517.hp1 HG02486.hp1 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02895.hp2 HG02970.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp2 NA19062.hp1 NA20129.hp1	intron_variant	MODIFIER	c.473-1158_473-1157d others(4): Show c.473-1158_473-1157delGG	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130594232
chr2:130594368	T T	C C	7	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(4): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019 a0004c0007t0005g0017 a0005c0008t0003g0009	10	HG01175.hp1 HG01243.hp1 HG01257.hp2 others(7): Show HG01175.hp1 HG01243.hp1 HG01257.hp2 HG02486.hp1 HG02622.hp2 HG02895.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.473-1292A>G c.473-1292A>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130594368
chr2:130594614	G G	A A	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG00558.hp1 HG00558.hp1	intron_variant	MODIFIER	c.473-1538C>T c.473-1538C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130594614
chr2:130594686	A A	G G	5	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 others(2): Show a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 a0002c0002t0002g0007 a0002c0002t0002g0044	7	HG01069.hp1 HG01106.hp1 HG01517.hp1 others(4): Show HG01069.hp1 HG01106.hp1 HG01517.hp1 HG02572.hp1 HG02572.hp2 HG02970.hp1 NA19062.hp1	intron_variant	MODIFIER	c.473-1610T>C c.473-1610T>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130594686
chr2:130594717	T T	G G	1	a0005c0008t0003g0009 a0005c0008t0003g0009	2	HG02895.hp2 HG03098.hp1 HG02895.hp2 HG03098.hp1	intron_variant	MODIFIER	c.473-1641A>C c.473-1641A>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130594717
chr2:130594833	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	NA19000.hp2 NA19000.hp2	intron_variant	MODIFIER	c.473-1757G>A c.473-1757G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130594833
chr2:130594875	T T	C C	10	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 others(7): Show a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019 a0004c0007t0005g0017 a0005c0008t0003g0009	13	HG01175.hp1 HG01243.hp1 HG01257.hp2 others(10): Show HG01175.hp1 HG01243.hp1 HG01257.hp2 HG02486.hp1 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02895.hp2 HG02970.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.473-1799A>G c.473-1799A>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130594875
chr2:130595121	T T	C C	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	NA18979.hp2 NA18979.hp2	intron_variant	MODIFIER	c.473-2045A>G c.473-2045A>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595121
chr2:130595152	T T	C C	1	a0001c0001t0001g0013 a0001c0001t0001g0013	2	HG02071.hp1 NA18612.hp1 HG02071.hp1 NA18612.hp1	intron_variant	MODIFIER	c.473-2076A>G c.473-2076A>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595152
chr2:130595287	A A	AT AT	3	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047	3	HG02572.hp1 HG02572.hp2 HG02970.hp1 HG02572.hp1 HG02572.hp2 HG02970.hp1	intron_variant	MODIFIER	c.472+2206dupA c.472+2206dupA	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595287
chr2:130595325	C C	T T	6	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(3): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019 a0004c0007t0005g0017	8	HG01175.hp1 HG01243.hp1 HG01257.hp2 others(5): Show HG01175.hp1 HG01243.hp1 HG01257.hp2 HG02486.hp1 HG02622.hp2 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.472+2169G>A c.472+2169G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595325
chr2:130595381	G G	A A	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	NA20805.hp2 NA20805.hp2	intron_variant	MODIFIER	c.472+2113C>T c.472+2113C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595381
chr2:130595414	A A	T T	9	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0025 others(6): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0008g0050 a0007c0013t0001g0039	41	HG00438.hp1 HG01169.hp2 HG01261.hp2 others(38): Show HG00438.hp1 HG01169.hp2 HG01261.hp2 HG01496.hp1 HG01975.hp1 HG02132.hp2 HG02148.hp2 HG02523.hp1 HG02602.hp1 HG03471.hp1 HG03486.hp2 HG03579.hp2 HG03834.hp1 HG04199.hp1 NA18947.hp2 NA18948.hp1 NA18956.hp1 NA18966.hp1 NA18971.hp2 NA18982.hp2 NA18986.hp2 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19003.hp2 NA19007.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp2 NA19068.hp1 NA19070.hp2 NA19072.hp1 NA19075.hp1 NA19080.hp2 NA19082.hp1 NA19090.hp1 NA19091.hp1 NA20129.hp2	intron_variant	MODIFIER	c.472+2080T>A c.472+2080T>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595414
chr2:130595469	C C	G G	3	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047	3	HG02572.hp1 HG02572.hp2 HG02970.hp1 HG02572.hp1 HG02572.hp2 HG02970.hp1	intron_variant	MODIFIER	c.472+2025G>C c.472+2025G>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595469
chr2:130595559	G G	A A	1	a0001c0001t0001g0014 a0001c0001t0001g0014	2	NA19065.hp2 NA19067.hp2 NA19065.hp2 NA19067.hp2	intron_variant	MODIFIER	c.472+1935C>T c.472+1935C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595559
chr2:130595587	A A	G G	2	a0002c0002t0002g0007 a0002c0002t0002g0044 a0002c0002t0002g0007 a0002c0002t0002g0044	4	HG01069.hp1 HG01106.hp1 HG01517.hp1 others(1): Show HG01069.hp1 HG01106.hp1 HG01517.hp1 NA19062.hp1	intron_variant	MODIFIER	c.472+1907T>C c.472+1907T>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130595587
chr2:130596512	G G	A A	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	HG03654.hp1 HG03654.hp1	intron_variant	MODIFIER	c.472+982C>T c.472+982C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596512
chr2:130596518	C C	G G	7	a0001c0001t0001g0046 a0001c0004t0002g0020 a0001c0004t0002g0021 others(4): Show a0001c0001t0001g0046 a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0002c0002t0002g0007 a0002c0002t0002g0044 a0003c0003t0002g0008	10	HG01069.hp1 HG01106.hp1 HG01175.hp1 others(7): Show HG01069.hp1 HG01106.hp1 HG01175.hp1 HG01517.hp1 HG02486.hp1 HG02572.hp2 HG03098.hp2 HG03139.hp2 NA19062.hp1 NA20129.hp1	intron_variant	MODIFIER	c.472+976G>C c.472+976G>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596518
chr2:130596518	C C	T T	3	a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0002g0038 a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0002g0038	4	HG01175.hp2 HG01346.hp1 HG01346.hp2 others(1): Show HG01175.hp2 HG01346.hp1 HG01346.hp2 HG03579.hp1	intron_variant	MODIFIER	c.472+976G>A c.472+976G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596518
chr2:130596598	G G	A A	1	a0001c0004t0002g0021 a0001c0004t0002g0021	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.472+896C>T c.472+896C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596598
chr2:130596741	T T	C C	2	a0002c0002t0002g0007 a0002c0002t0002g0044 a0002c0002t0002g0007 a0002c0002t0002g0044	4	HG01069.hp1 HG01106.hp1 HG01517.hp1 others(1): Show HG01069.hp1 HG01106.hp1 HG01517.hp1 NA19062.hp1	intron_variant	MODIFIER	c.472+753A>G c.472+753A>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596741
chr2:130596803	G G	C C	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG01192.hp2 HG01192.hp2	intron_variant	MODIFIER	c.472+691C>G c.472+691C>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596803
chr2:130596813	A A	C C	2	a0003c0003t0002g0008 a0003c0003t0002g0019 a0003c0003t0002g0008 a0003c0003t0002g0019	3	HG01175.hp1 HG01243.hp1 NA20129.hp1 HG01175.hp1 HG01243.hp1 NA20129.hp1	intron_variant	MODIFIER	c.472+681T>G c.472+681T>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596813
chr2:130596853	G G	A A	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	HG02015.hp1 HG02015.hp1	intron_variant	MODIFIER	c.472+641C>T c.472+641C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596853
chr2:130596952	G G	A A	10	a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 others(7): Show a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0007g0047 a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019 a0004c0007t0005g0017 a0005c0008t0003g0009	13	HG01175.hp1 HG01243.hp1 HG01257.hp2 others(10): Show HG01175.hp1 HG01243.hp1 HG01257.hp2 HG02486.hp1 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02895.hp2 HG02970.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.472+542C>T c.472+542C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130596952
chr2:130597091	C C	A A	1	a0001c0004t0002g0022 a0001c0004t0002g0022	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.472+403G>T c.472+403G>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130597091
chr2:130597416	C C	A A	2	a0001c0001t0001g0015 a0001c0001t0002g0038 a0001c0001t0001g0015 a0001c0001t0002g0038	3	HG01175.hp2 HG01346.hp1 HG01346.hp2 HG01175.hp2 HG01346.hp1 HG01346.hp2	intron_variant	MODIFIER	c.472+78G>T c.472+78G>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130597416
chr2:130597421	T T	C C	1	a0005c0008t0003g0009 a0005c0008t0003g0009	2	HG02895.hp2 HG03098.hp1 HG02895.hp2 HG03098.hp1	intron_variant	MODIFIER	c.472+73A>G c.472+73A>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	5/5	chr2	130597421
chr2:130597700	G G	A A	1	a0001c0001t0001g0016 a0001c0001t0001g0016	2	HG02074.hp2 NA18946.hp2 HG02074.hp2 NA18946.hp2	intron_variant	MODIFIER	c.363-97C>T c.363-97C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	4/5	chr2	130597700
chr2:130597777	C C	G G	4	a0001c0004t0002g0020 a0001c0004t0002g0021 a0003c0003t0002g0008 others(1): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0003c0003t0002g0008 a0003c0003t0002g0019	5	HG01175.hp1 HG01243.hp1 HG03098.hp2 others(2): Show HG01175.hp1 HG01243.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.362+91G>C c.362+91G>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	4/5	chr2	130597777
chr2:130598046	G G	C C	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.248-64C>G c.248-64C>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/5	chr2	130598046
chr2:130598139	C C	T T	5	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(2): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.248-157G>A c.248-157G>A	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/5	chr2	130598139
chr2:130598140	A A	G G	5	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(2): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.248-158T>C c.248-158T>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/5	chr2	130598140
chr2:130598243	T T	C C	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	NA18982.hp2 NA18982.hp2	intron_variant	MODIFIER	c.248-261A>G c.248-261A>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/5	chr2	130598243
chr2:130598290	G G	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG00621.hp2 HG00621.hp2	intron_variant	MODIFIER	c.248-308C>G c.248-308C>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/5	chr2	130598290
chr2:130598293	G G	A A	1	a0004c0007t0005g0017 a0004c0007t0005g0017	2	HG01257.hp2 HG02622.hp2 HG01257.hp2 HG02622.hp2	intron_variant	MODIFIER	c.248-311C>T c.248-311C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/5	chr2	130598293
chr2:130598429	C C	G G	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.247+213G>C c.247+213G>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/5	chr2	130598429
chr2:130598455	G G	A A	17	a0001c0001t0001g0004 a0001c0001t0001g0046 a0001c0001t0001g0048 others(14): Show a0001c0001t0001g0004 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0006g0045 a0001c0001t0007g0047 a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0001c0009t0001g0018 a0001c0014t0001g0049 a0002c0002t0002g0007 a0002c0002t0002g0044 a0003c0003t0002g0008 a0003c0003t0002g0019 a0004c0007t0005g0017 a0005c0008t0003g0009 a0008c0010t0001g0043	31	HG00438.hp2 HG01069.hp1 HG01106.hp1 others(28): Show HG00438.hp2 HG01069.hp1 HG01106.hp1 HG01175.hp1 HG01243.hp1 HG01257.hp2 HG01517.hp1 HG02027.hp2 HG02071.hp2 HG02135.hp1 HG02486.hp1 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02895.hp2 HG02970.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03834.hp2 HG04199.hp2 NA18995.hp2 NA19010.hp1 NA19012.hp1 NA19057.hp2 NA19062.hp1 NA19072.hp2 NA19080.hp1 NA19082.hp2 NA20129.hp1	intron_variant	MODIFIER	c.247+187C>T c.247+187C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	3/5	chr2	130598455
chr2:130598984	G G	A A	5	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(2): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0004c0007t0005g0017 a0005c0008t0003g0009	7	HG01257.hp2 HG02486.hp1 HG02622.hp2 others(4): Show HG01257.hp2 HG02486.hp1 HG02622.hp2 HG02895.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2	intron_variant	MODIFIER	c.24-25C>T c.24-25C>T	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	1/5	chr2	130598984
chr2:130599110	C C	G G	1	a0005c0008t0003g0009 a0005c0008t0003g0009	2	HG02895.hp2 HG03098.hp1 HG02895.hp2 HG03098.hp1	intron_variant	MODIFIER	c.24-151G>C c.24-151G>C	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	1/5	chr2	130599110
chr2:130599160	A A	C C	5	a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 others(2): Show a0001c0004t0002g0020 a0001c0004t0002g0021 a0001c0004t0002g0022 a0003c0003t0002g0008 a0003c0003t0002g0019	6	HG01175.hp1 HG01243.hp1 HG02486.hp1 others(3): Show HG01175.hp1 HG01243.hp1 HG02486.hp1 HG03098.hp2 HG03139.hp2 NA20129.hp1	intron_variant	MODIFIER	c.23+105T>G c.23+105T>G	CFC1	ENSG00000136698.10	transcript	ENST00000259216.6	protein_coding	1/5	chr2	130599160

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JoGo Online Haplotype Explorer CFC1_chr2_130587165_130604575

JoGo Local Haplotype Explorer (on iGV) CFC1_chr2_130587165_130604575

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 8)

CCoding Level Haplotype Info (Total: 14)

TTranscript Level Haplotype Info (Total: 9)

GGenebody Level Haplotype Info (Total: 51)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 14)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 20)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 51)

Haplotype Details by Sample (Haploid Level) (Total: 242)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 6)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 8)

TTranscript Level Haplotype Variants (Exon) (Total: 8)

GGenebody Level Haplotype Variants (Intron) (Total: 56)

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Annotation (Repeats)

Annotation (SNP Array)