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geneid	353133
ensemblid	ENSG00000197084.6
hgncid	29464
symbol	LCE1C
name	late cornified envelope 1C
refseq_nuc	NM_178351.4
refseq_prot	NP_848128.1
ensembl_nuc	ENST00000607093.2
ensembl_prot	ENSP00000475270.1
mane_status	MANE Select
chr	chr1
start	152804832
end	152806651
strand	-
ver	v1.2
region	chr1:152804832-152806651
region5000	chr1:152799832-152811651
regionname0	LCE1C_chr1_152804832_152806651
regionname5000	LCE1C_chr1_152799832_152811651

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	118	309	70	51	145	13	28	117	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0002	0/0	118	109	21	18	55	1	14	35	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0003	0/0	118	3	3	0	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0004	0/0	118	1	0	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	357	253	52	32	135	7	25	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
c0002	0/0	357	107	21	18	53	1	14	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
c0003	0/0	357	56	18	19	10	6	3	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
c0004	0/0	357	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
c0005	0/0	357	2	0	0	2	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
c0006	0/0	357	1	0	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	362	255	54	32	135	7	25	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
t0002	0/0	362	105	16	19	55	1	14	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
t0003	0/0	362	47	9	19	10	6	3	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
t0004	0/0	362	9	9	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
t0005	0/0	362	4	4	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
t0006	0/0	362	2	2	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	190	15	29	119	6	20	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0002	0/0	53	0	9	37	0	7	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0003	0/0	39	3	18	9	6	3	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0004	0/0	32	9	6	11	1	5	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0005	0/0	15	2	0	10	0	3	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0006	0/0	14	14	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0007	0/0	5	5	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0008	0/0	5	0	2	3	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0009	0/0	5	0	0	3	1	1	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0010	0/0	4	0	1	2	0	1	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0011	0/0	4	4	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0012	0/0	4	4	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0013	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0014	0/0	3	0	2	0	0	1	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0015	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0016	0/0	3	2	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0017	0/0	3	0	0	3	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0018	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0019	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0020	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0021	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0022	0/0	2	2	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0023	0/0	2	0	0	2	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0024	0/0	2	2	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0025	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0026	0/0	1	0	0	1	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0027	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0028	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0029	0/0	1	0	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0030	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0031	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0032	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0033	0/0	1	0	0	0	0	1	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0034	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0035	0/1	1	0	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0036	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0037	0/0	1	0	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0038	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0039	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0040	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0041	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0042	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
g0043	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	357	253	52	32	135	7	25	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0001c0003	0/0	357	56	18	19	10	6	3	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0002c0002	0/0	357	107	21	18	53	1	14	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0002c0005	0/0	357	2	0	0	2	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0003c0004	0/0	357	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0004c0006	0/0	357	1	0	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	718	252	51	32	135	7	25	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0001c0001t0006	0/0	718	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0001c0003t0003	0/0	718	47	9	19	10	6	3	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0001c0003t0004	0/0	718	9	9	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0002c0002t0002	0/0	718	102	16	18	53	1	14	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0002c0002t0005	0/0	718	4	4	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0002c0002t0006	0/0	718	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0002c0005t0002	0/0	718	2	0	0	2	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0003c0004t0001	0/0	718	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651
a0004c0006t0002	0/0	718	1	0	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	copy fasta	chr1	152799832	152811651

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	190	15	29	119	6	20	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0005	0/0	15	2	0	10	0	3	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0006	0/0	14	14	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0009	0/0	5	0	0	3	1	1	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0013	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0014	0/0	3	0	2	0	0	1	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0016	0/0	3	2	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0017	0/0	3	0	0	3	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0018	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0019	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0022	0/0	2	2	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0025	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0030	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0034	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0035	0/1	1	0	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0038	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0041	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0001g0042	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0001t0006g0028	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0003g0003	0/0	39	3	18	9	6	3	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0003g0007	0/0	5	5	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0003g0026	0/0	1	0	0	1	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0003g0029	0/0	1	0	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0003g0043	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0004g0011	0/0	4	4	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0004g0021	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0004g0032	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0001c0003t0004g0039	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0002g0002	0/0	53	0	9	37	0	7	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0002g0004	0/0	32	9	6	11	1	5	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0002g0008	0/0	5	0	2	3	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0002g0010	0/0	4	0	1	2	0	1	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0002g0012	0/0	4	4	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0002g0024	0/0	2	2	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0002g0031	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0002g0033	0/0	1	0	0	0	0	1	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0005g0020	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0005g0040	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0002t0006g0027	0/0	1	1	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0002c0005t0002g0023	0/0	2	0	0	2	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0003c0004t0001g0015	0/0	3	3	0	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
a0004c0006t0002g0037	0/0	1	0	1	0	0	0	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00099	hp2	a0001	c0003	t0003	g0003	EUR	GBR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00140	hp1	a0001	c0001	t0001	g0009	EUR	GBR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00140	hp2	a0001	c0003	t0003	g0003	EUR	GBR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00280	hp1	a0001	c0003	t0003	g0003	EUR	FIN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00408	hp1	a0002	c0002	t0002	g0002	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00544	hp2	a0002	c0002	t0002	g0004	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00558	hp1	a0001	c0003	t0003	g0003	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00597	hp1	a0002	c0002	t0002	g0004	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00609	hp2	a0001	c0001	t0001	g0005	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00642	hp1	a0004	c0006	t0002	g0037	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00673	hp1	a0002	c0002	t0002	g0010	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00673	hp2	a0002	c0002	t0002	g0002	EAS	CHS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00733	hp1	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00735	hp2	a0002	c0002	t0002	g0004	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00738	hp2	a0001	c0001	t0001	g0014	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG00741	hp2	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01070	hp2	a0002	c0002	t0002	g0008	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01071	hp1	a0002	c0002	t0002	g0008	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01071	hp2	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01074	hp1	a0002	c0002	t0002	g0004	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01106	hp1	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01106	hp2	a0002	c0002	t0002	g0002	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01109	hp2	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01167	hp1	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01167	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01168	hp1	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01175	hp1	a0001	c0003	t0003	g0029	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01175	hp2	a0002	c0002	t0002	g0004	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01192	hp2	a0002	c0002	t0002	g0004	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01243	hp1	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01243	hp2	a0001	c0003	t0003	g0003	AMR	PUR	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01255	hp2	a0001	c0003	t0003	g0003	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01256	hp1	a0002	c0002	t0002	g0002	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01257	hp1	a0001	c0003	t0003	g0003	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01258	hp1	a0001	c0003	t0003	g0003	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01258	hp2	a0002	c0002	t0002	g0002	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01261	hp1	a0002	c0002	t0002	g0004	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01261	hp2	a0001	c0003	t0003	g0003	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01361	hp1	a0001	c0001	t0001	g0014	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01361	hp2	a0002	c0002	t0002	g0002	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01433	hp1	a0002	c0002	t0002	g0004	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01496	hp2	a0001	c0003	t0003	g0003	AMR	CLM	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01515	hp2	a0001	c0003	t0003	g0003	EUR	IBS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01516	hp2	a0002	c0002	t0002	g0004	EUR	IBS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01517	hp2	a0001	c0003	t0003	g0003	EUR	IBS	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01884	hp2	a0001	c0003	t0003	g0003	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01891	hp1	a0001	c0003	t0003	g0007	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01934	hp2	a0001	c0003	t0003	g0003	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01952	hp1	a0002	c0002	t0002	g0002	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01952	hp2	a0002	c0002	t0002	g0002	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01975	hp1	a0001	c0001	t0001	g0016	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01993	hp1	a0002	c0002	t0002	g0010	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02004	hp1	a0001	c0003	t0003	g0003	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02004	hp2	a0001	c0003	t0003	g0003	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02015	hp1	a0001	c0003	t0003	g0003	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02027	hp1	a0002	c0002	t0002	g0004	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02027	hp2	a0002	c0002	t0002	g0002	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02040	hp1	a0002	c0002	t0002	g0004	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02055	hp1	a0001	c0001	t0001	g0013	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02055	hp2	a0001	c0001	t0001	g0006	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02056	hp1	a0002	c0002	t0002	g0004	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02071	hp2	a0002	c0002	t0002	g0002	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02080	hp1	a0002	c0002	t0002	g0002	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02080	hp2	a0002	c0002	t0002	g0002	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02083	hp1	a0001	c0001	t0001	g0005	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02083	hp2	a0001	c0003	t0003	g0003	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02129	hp1	a0002	c0002	t0002	g0002	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02132	hp1	a0002	c0002	t0002	g0002	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02132	hp2	a0002	c0002	t0002	g0004	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02135	hp1	a0001	c0001	t0001	g0009	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02135	hp2	a0002	c0002	t0002	g0010	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02145	hp1	a0002	c0002	t0002	g0012	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02148	hp2	a0002	c0002	t0002	g0002	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02155	hp1	a0001	c0001	t0001	g0009	EAS	CDX	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02165	hp1	a0002	c0002	t0002	g0008	EAS	CDX	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02165	hp2	a0002	c0002	t0002	g0002	EAS	CDX	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02257	hp1	a0002	c0002	t0002	g0004	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02257	hp2	a0002	c0002	t0002	g0012	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02258	hp1	a0001	c0003	t0004	g0032	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02258	hp2	a0003	c0004	t0001	g0015	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02280	hp1	a0001	c0001	t0001	g0022	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02280	hp2	a0001	c0001	t0001	g0006	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02293	hp1	a0002	c0002	t0002	g0002	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02300	hp1	a0001	c0003	t0003	g0003	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02300	hp2	a0002	c0002	t0002	g0002	AMR	PEL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02451	hp1	a0001	c0001	t0001	g0041	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02451	hp2	a0001	c0001	t0001	g0006	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02572	hp1	a0001	c0003	t0004	g0011	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02572	hp2	a0002	c0002	t0005	g0020	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02602	hp2	a0002	c0002	t0002	g0002	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02615	hp1	a0001	c0001	t0001	g0038	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02615	hp2	a0002	c0002	t0002	g0004	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02622	hp1	a0001	c0001	t0001	g0006	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02622	hp2	a0001	c0001	t0001	g0006	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02630	hp1	a0001	c0003	t0004	g0021	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02630	hp2	a0001	c0001	t0001	g0006	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02647	hp1	a0001	c0003	t0003	g0043	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02647	hp2	a0001	c0001	t0001	g0016	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02683	hp1	a0001	c0003	t0003	g0003	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02717	hp2	a0002	c0002	t0005	g0040	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02723	hp1	a0001	c0003	t0003	g0007	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02723	hp2	a0002	c0002	t0002	g0004	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02735	hp2	a0002	c0002	t0002	g0033	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02738	hp2	a0002	c0002	t0002	g0002	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02809	hp2	a0001	c0001	t0001	g0006	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02818	hp1	a0002	c0002	t0002	g0004	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02818	hp2	a0002	c0002	t0005	g0020	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02886	hp1	a0001	c0001	t0001	g0036	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02886	hp2	a0003	c0004	t0001	g0015	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02895	hp1	a0001	c0001	t0001	g0019	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02895	hp2	a0001	c0001	t0001	g0013	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02896	hp1	a0002	c0002	t0002	g0024	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02896	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02897	hp1	a0002	c0002	t0002	g0024	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02897	hp2	a0001	c0001	t0001	g0013	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02922	hp1	a0001	c0001	t0001	g0006	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02922	hp2	a0001	c0001	t0001	g0042	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02965	hp1	a0002	c0002	t0002	g0031	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02965	hp2	a0001	c0003	t0003	g0007	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02976	hp1	a0001	c0001	t0001	g0006	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02976	hp2	a0001	c0001	t0001	g0005	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03041	hp1	a0001	c0003	t0004	g0011	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03041	hp2	a0002	c0002	t0002	g0012	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03098	hp1	a0001	c0001	t0001	g0030	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03098	hp2	a0001	c0001	t0001	g0018	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03130	hp2	a0001	c0003	t0003	g0007	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03139	hp1	a0001	c0001	t0001	g0006	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03139	hp2	a0003	c0004	t0001	g0015	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03195	hp1	a0002	c0002	t0002	g0004	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03195	hp2	a0001	c0001	t0001	g0006	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03225	hp1	a0001	c0001	t0001	g0018	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03225	hp2	a0001	c0001	t0001	g0019	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03239	hp2	a0002	c0002	t0002	g0004	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03453	hp1	a0001	c0001	t0001	g0022	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03453	hp2	a0002	c0002	t0002	g0004	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03486	hp1	a0001	c0001	t0001	g0006	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03486	hp2	a0002	c0002	t0002	g0004	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03490	hp1	a0001	c0001	t0001	g0014	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03491	hp2	a0002	c0002	t0002	g0002	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03492	hp1	a0002	c0002	t0002	g0002	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03516	hp1	a0001	c0003	t0004	g0021	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03516	hp2	a0001	c0003	t0003	g0003	AFR	ESN	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03540	hp2	a0001	c0003	t0004	g0021	AFR	GWD	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03579	hp2	a0001	c0003	t0004	g0011	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03669	hp1	a0001	c0003	t0003	g0003	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03669	hp2	a0001	c0001	t0001	g0005	SAS	PJL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03688	hp2	a0002	c0002	t0002	g0002	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03831	hp2	a0002	c0002	t0002	g0004	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03927	hp1	a0002	c0002	t0002	g0004	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03927	hp2	a0002	c0002	t0002	g0010	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03942	hp1	a0001	c0001	t0001	g0005	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03942	hp2	a0002	c0002	t0002	g0002	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04115	hp2	a0001	c0003	t0003	g0003	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04184	hp1	a0002	c0002	t0002	g0004	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04204	hp1	a0001	c0001	t0001	g0009	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04204	hp2	a0001	c0001	t0001	g0005	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04228	hp1	a0002	c0002	t0002	g0002	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG04228	hp2	a0002	c0002	t0002	g0004	SAS	STU	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18522	hp1	a0001	c0001	t0001	g0006	AFR	YRI	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18522	hp2	a0001	c0001	t0006	g0028	AFR	YRI	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18612	hp2	a0002	c0002	t0002	g0002	EAS	CHB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18747	hp1	a0002	c0002	t0002	g0002	EAS	CHB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18906	hp1	a0001	c0003	t0004	g0011	AFR	YRI	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18940	hp2	a0001	c0001	t0001	g0005	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18941	hp1	a0001	c0001	t0001	g0005	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18942	hp1	a0002	c0002	t0002	g0004	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18943	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18945	hp2	a0001	c0003	t0003	g0003	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18947	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18949	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18951	hp1	a0001	c0001	t0001	g0005	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18951	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18952	hp1	a0001	c0001	t0001	g0009	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18954	hp1	a0001	c0003	t0003	g0026	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18956	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18957	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18961	hp2	a0002	c0002	t0002	g0008	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18963	hp1	a0001	c0001	t0001	g0005	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18965	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18965	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18966	hp1	a0001	c0003	t0003	g0003	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18967	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18970	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18971	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18973	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18977	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18984	hp2	a0001	c0001	t0001	g0005	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18985	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18985	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18986	hp2	a0001	c0003	t0003	g0003	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18987	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18993	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18994	hp1	a0001	c0003	t0003	g0003	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18994	hp2	a0002	c0002	t0002	g0004	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18997	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18997	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18998	hp1	a0001	c0003	t0003	g0003	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18999	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19000	hp1	a0002	c0002	t0002	g0004	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19003	hp2	a0001	c0001	t0001	g0017	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19004	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19007	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19011	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19012	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19030	hp1	a0001	c0001	t0001	g0006	AFR	LWK	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19030	hp2	a0002	c0002	t0002	g0012	AFR	LWK	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19054	hp2	a0002	c0005	t0002	g0023	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19055	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19057	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19059	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19059	hp2	a0001	c0001	t0001	g0017	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19060	hp2	a0002	c0002	t0002	g0004	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19063	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19063	hp2	a0001	c0001	t0001	g0005	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19072	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19072	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19074	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19075	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19076	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19078	hp1	a0001	c0003	t0003	g0003	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19078	hp2	a0001	c0001	t0001	g0017	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19079	hp1	a0001	c0001	t0001	g0005	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19081	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19082	hp2	a0002	c0002	t0002	g0008	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19083	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19083	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19084	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19085	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19086	hp2	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19087	hp1	a0001	c0001	t0001	g0005	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19089	hp1	a0002	c0002	t0002	g0002	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19090	hp1	a0002	c0005	t0002	g0023	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19240	hp1	a0001	c0001	t0001	g0018	AFR	YRI	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA19240	hp2	a0002	c0002	t0005	g0020	AFR	YRI	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA20129	hp1	a0001	c0003	t0003	g0007	AFR	ASW	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA20129	hp2	a0002	c0002	t0002	g0004	AFR	ASW	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA20752	hp2	a0001	c0003	t0003	g0003	EUR	TSI	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02109	hp2	a0002	c0002	t0006	g0027	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02486	hp2	a0001	c0001	t0001	g0005	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02559	hp1	a0001	c0001	t0001	g0016	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG02559	hp2	a0001	c0003	t0003	g0003	AFR	ACB	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03471	hp1	a0001	c0001	t0001	g0034	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG03471	hp2	a0001	c0001	t0001	g0025	AFR	MSL	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG06807	hp1	a0002	c0002	t0002	g0004	AFR	USA	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA18955	hp2	a0002	c0002	t0002	g0004	EAS	JPT	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA21309	hp1	a0001	c0001	t0001	g0019	AFR	LWK	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
NA21309	hp2	a0001	c0003	t0004	g0039	AFR	LWK	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0035	REF	REF	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	LCE1C_chr1_152799832_152811651	LCE1C	chr1	152799832	152811651

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:152805162	C C	T T	1	a0003 a0003	3	HG02258.hp2 HG02886.hp2 HG03139.hp2 HG02258.hp2 HG02886.hp2 HG03139.hp2	missense_variant	MODERATE	c.317G>A c.317G>A	p.Cys106Tyr p.Cys106Tyr	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	388/718	317/357	106/118	chr1	152805162
chr1:152805180	G G	A A	1	a0004 a0004	1	HG00642.hp1 HG00642.hp1	missense_variant	MODERATE	c.299C>T c.299C>T	p.Ser100Leu p.Ser100Leu	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	370/718	299/357	100/118	chr1	152805180
chr1:152805432	C C	T T	2	a0002 a0004 a0002 a0004	110	HG00408.hp1 HG00544.hp2 HG00597.hp1 others(107): Show HG00408.hp1 HG00544.hp2 HG00597.hp1 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01106.hp2 HG01175.hp2 HG01192.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG01993.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02293.hp1 HG02300.hp2 HG02572.hp2 HG02602.hp2 HG02615.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG03041.hp2 HG03195.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp2 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04184.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18747.hp1 NA18942.hp1 NA18943.hp1 NA18947.hp1 NA18949.hp1 NA18951.hp2 NA18955.hp2 NA18956.hp2 NA18957.hp2 NA18961.hp2 NA18965.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18985.hp1 NA18987.hp1 NA18994.hp2 NA18999.hp1 NA19000.hp1 NA19007.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp2 NA19063.hp1 NA19074.hp1 NA19075.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19089.hp1 NA19090.hp1 NA19240.hp2 NA20129.hp2	missense_variant	MODERATE	c.47G>A c.47G>A	p.Cys16Tyr p.Cys16Tyr	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	118/718	47/357	16/118	chr1	152805432

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr1:152805179	C C	T T	1	a0002c0005 a0002c0005	2	NA19054.hp2 NA19090.hp1 NA19054.hp2 NA19090.hp1	synonymous_variant	LOW	c.300G>A c.300G>A	p.Ser100Ser p.Ser100Ser	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	371/718	300/357	100/118			chr1	152805179
chr1:152805392	A A	G G	1	a0001c0003 a0001c0003	56	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(53): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00558.hp1 HG00733.hp1 HG00741.hp2 HG01071.hp2 HG01106.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01175.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02083.hp2 HG02258.hp1 HG02300.hp1 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02723.hp1 HG02965.hp2 HG03041.hp1 HG03130.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03669.hp1 HG04115.hp2 NA18906.hp1 NA18945.hp2 NA18954.hp1 NA18966.hp1 NA18986.hp2 NA18994.hp1 NA18998.hp1 NA19078.hp1 NA20129.hp1 NA20752.hp2 NA21309.hp2	synonymous_variant	LOW	c.87T>C c.87T>C	p.Cys29Cys p.Cys29Cys	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	158/718	87/357	29/118			chr1	152805392

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:152804865	C C	T T	5	a0001c0001t0006 a0002c0002t0002 a0002c0002t0006 others(2): Show a0001c0001t0006 a0002c0002t0002 a0002c0002t0006 a0002c0005t0002 a0004c0006t0002	107	HG00408.hp1 HG00544.hp2 HG00597.hp1 others(104): Show HG00408.hp1 HG00544.hp2 HG00597.hp1 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01106.hp2 HG01175.hp2 HG01192.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG01993.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02293.hp1 HG02300.hp2 HG02602.hp2 HG02615.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02818.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG03041.hp2 HG03195.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp2 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04184.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18942.hp1 NA18943.hp1 NA18947.hp1 NA18949.hp1 NA18951.hp2 NA18955.hp2 NA18956.hp2 NA18957.hp2 NA18961.hp2 NA18965.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18985.hp1 NA18987.hp1 NA18994.hp2 NA18999.hp1 NA19000.hp1 NA19007.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp2 NA19063.hp1 NA19074.hp1 NA19075.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19089.hp1 NA19090.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.257G>A c.257G>A	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	257	chr1	152804865
chr1:152804989	A A	G G	2	a0001c0003t0003 a0001c0003t0004 a0001c0003t0003 a0001c0003t0004	56	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(53): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00558.hp1 HG00733.hp1 HG00741.hp2 HG01071.hp2 HG01106.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01175.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02083.hp2 HG02258.hp1 HG02300.hp1 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02723.hp1 HG02965.hp2 HG03041.hp1 HG03130.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03669.hp1 HG04115.hp2 NA18906.hp1 NA18945.hp2 NA18954.hp1 NA18966.hp1 NA18986.hp2 NA18994.hp1 NA18998.hp1 NA19078.hp1 NA20129.hp1 NA20752.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.133T>C c.133T>C	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	133	chr1	152804989
chr1:152805098	G G	A A	3	a0002c0002t0002 a0002c0005t0002 a0004c0006t0002 a0002c0002t0002 a0002c0005t0002 a0004c0006t0002	105	HG00408.hp1 HG00544.hp2 HG00597.hp1 others(102): Show HG00408.hp1 HG00544.hp2 HG00597.hp1 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01106.hp2 HG01175.hp2 HG01192.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG01993.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02293.hp1 HG02300.hp2 HG02602.hp2 HG02615.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02818.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG03041.hp2 HG03195.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp2 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04184.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18747.hp1 NA18942.hp1 NA18943.hp1 NA18947.hp1 NA18949.hp1 NA18951.hp2 NA18955.hp2 NA18956.hp2 NA18957.hp2 NA18961.hp2 NA18965.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18985.hp1 NA18987.hp1 NA18994.hp2 NA18999.hp1 NA19000.hp1 NA19007.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp2 NA19063.hp1 NA19074.hp1 NA19075.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19089.hp1 NA19090.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.24C>T c.24C>T	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	24	chr1	152805098
chr1:152805109	C C	T T	1	a0002c0002t0005 a0002c0002t0005	4	HG02572.hp2 HG02717.hp2 HG02818.hp2 others(1): Show HG02572.hp2 HG02717.hp2 HG02818.hp2 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.13G>A c.13G>A	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	13	chr1	152805109
chr1:152805488	G G	A A	1	a0001c0003t0003 a0001c0003t0003	47	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(44): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00558.hp1 HG00733.hp1 HG00741.hp2 HG01071.hp2 HG01106.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01175.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02083.hp2 HG02300.hp1 HG02559.hp2 HG02647.hp1 HG02683.hp1 HG02723.hp1 HG02965.hp2 HG03130.hp2 HG03516.hp2 HG03669.hp1 HG04115.hp2 NA18945.hp2 NA18954.hp1 NA18966.hp1 NA18986.hp2 NA18994.hp1 NA18998.hp1 NA19078.hp1 NA20129.hp1 NA20752.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-10C>T c.-10C>T	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2		chr1	152805488

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr1:152805625	T T	C C	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.-20-127A>G c.-20-127A>G	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152805625
chr1:152805642	G G	A A	16	a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0022 others(13): Show a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0042 a0001c0003t0003g0003 a0001c0003t0003g0007 a0001c0003t0003g0026 a0001c0003t0003g0029 a0001c0003t0003g0043 a0001c0003t0004g0011 a0001c0003t0004g0021 a0001c0003t0004g0032 a0001c0003t0004g0039	80	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(77): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00558.hp1 HG00609.hp2 HG00733.hp1 HG00741.hp2 HG01071.hp2 HG01106.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01175.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG01975.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02083.hp1 HG02083.hp2 HG02258.hp1 HG02280.hp1 HG02300.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02723.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03942.hp1 HG04115.hp2 HG04204.hp2 NA18906.hp1 NA18940.hp2 NA18941.hp1 NA18945.hp2 NA18951.hp1 NA18954.hp1 NA18963.hp1 NA18966.hp1 NA18984.hp2 NA18986.hp2 NA18994.hp1 NA18998.hp1 NA19063.hp2 NA19078.hp1 NA19079.hp1 NA19087.hp1 NA20129.hp1 NA20752.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-20-144C>T c.-20-144C>T	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152805642
chr1:152805877	T T	C C	1	a0002c0002t0002g0008 a0002c0002t0002g0008	5	HG01070.hp2 HG01071.hp1 HG02165.hp1 others(2): Show HG01070.hp2 HG01071.hp1 HG02165.hp1 NA18961.hp2 NA19082.hp2	intron_variant	MODIFIER	c.-20-379A>G c.-20-379A>G	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152805877
chr1:152805880	T T	C C	1	a0001c0001t0001g0017 a0001c0001t0001g0017	3	NA19003.hp2 NA19059.hp2 NA19078.hp2 NA19003.hp2 NA19059.hp2 NA19078.hp2	intron_variant	MODIFIER	c.-20-382A>G c.-20-382A>G	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152805880
chr1:152805967	G G	T T	19	a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0001t0001g0035 others(16): Show a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0003t0003g0007 a0001c0003t0004g0011 a0001c0003t0004g0021 a0001c0003t0004g0032 a0001c0003t0004g0039 a0002c0002t0002g0002 a0002c0002t0002g0004 a0002c0002t0002g0008 a0002c0002t0002g0012 a0002c0002t0002g0024 a0002c0002t0002g0031 a0002c0002t0002g0033 a0002c0005t0002g0023 a0004c0006t0002g0037	135	HG00408.hp1 HG00544.hp2 HG00597.hp1 others(132): Show HG00408.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01106.hp2 HG01175.hp2 HG01192.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp2 HG01891.hp1 HG01952.hp1 HG01952.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02300.hp2 HG02486.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02818.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp2 HG03195.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp2 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp1 NA18943.hp1 NA18947.hp1 NA18949.hp1 NA18951.hp1 NA18951.hp2 NA18955.hp2 NA18956.hp2 NA18957.hp2 NA18961.hp2 NA18963.hp1 NA18965.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18984.hp2 NA18985.hp1 NA18987.hp1 NA18994.hp2 NA18999.hp1 NA19000.hp1 NA19007.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19074.hp1 NA19075.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp1 NA19090.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-20-469C>A c.-20-469C>A	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152805967
chr1:152805968	G G	A A	3	a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0030 a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0030	7	HG02055.hp1 HG02895.hp2 HG02897.hp2 others(4): Show HG02055.hp1 HG02895.hp2 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03225.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-20-470C>T c.-20-470C>T	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152805968
chr1:152805986	T T	A A	2	a0001c0001t0001g0022 a0001c0003t0004g0011 a0001c0001t0001g0022 a0001c0003t0004g0011	6	HG02280.hp1 HG02572.hp1 HG03041.hp1 others(3): Show HG02280.hp1 HG02572.hp1 HG03041.hp1 HG03453.hp1 HG03579.hp2 NA18906.hp1	intron_variant	MODIFIER	c.-20-488A>T c.-20-488A>T	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152805986
chr1:152806010	A A	G G	1	a0002c0002t0005g0040 a0002c0002t0005g0040	1	HG02717.hp2 HG02717.hp2	intron_variant	MODIFIER	c.-20-512T>C c.-20-512T>C	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806010
chr1:152806050	C C	T T	16	a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0001t0001g0025 others(13): Show a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0003t0004g0011 a0001c0003t0004g0021 a0001c0003t0004g0032 a0001c0003t0004g0039 a0002c0002t0002g0002 a0002c0002t0002g0004 a0002c0002t0002g0008 a0002c0002t0002g0012 a0002c0002t0002g0031 a0002c0005t0002g0023 a0004c0006t0002g0037	127	HG00408.hp1 HG00544.hp2 HG00597.hp1 others(124): Show HG00408.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01106.hp2 HG01175.hp2 HG01192.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02300.hp2 HG02486.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02723.hp2 HG02738.hp2 HG02818.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03195.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp2 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp1 NA18943.hp1 NA18947.hp1 NA18949.hp1 NA18951.hp1 NA18951.hp2 NA18955.hp2 NA18956.hp2 NA18957.hp2 NA18961.hp2 NA18963.hp1 NA18965.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18984.hp2 NA18985.hp1 NA18987.hp1 NA18994.hp2 NA18999.hp1 NA19000.hp1 NA19007.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19074.hp1 NA19075.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp1 NA19090.hp1 NA20129.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-21+551G>A c.-21+551G>A	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806050
chr1:152806082	C C	T T	14	a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0001t0001g0025 others(11): Show a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0003t0004g0011 a0001c0003t0004g0032 a0001c0003t0004g0039 a0002c0002t0002g0004 a0002c0002t0002g0012 a0002c0002t0002g0024 a0002c0002t0002g0031 a0002c0005t0002g0023 a0004c0006t0002g0037	68	HG00544.hp2 HG00597.hp1 HG00609.hp2 others(65): Show HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00642.hp1 HG00735.hp2 HG01074.hp1 HG01175.hp2 HG01192.hp2 HG01261.hp1 HG01433.hp1 HG01516.hp2 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02132.hp2 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02486.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02723.hp2 HG02818.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03195.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03579.hp2 HG03669.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18906.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp1 NA18951.hp1 NA18955.hp2 NA18963.hp1 NA18984.hp2 NA18994.hp2 NA19000.hp1 NA19030.hp2 NA19054.hp2 NA19060.hp2 NA19063.hp2 NA19079.hp1 NA19087.hp1 NA19090.hp1 NA20129.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-21+519G>A c.-21+519G>A	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806082
chr1:152806100	G G	A A	21	a0001c0001t0001g0005 a0001c0001t0001g0019 a0001c0001t0001g0022 others(18): Show a0001c0001t0001g0005 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0003t0003g0003 a0001c0003t0003g0007 a0001c0003t0003g0026 a0001c0003t0004g0011 a0001c0003t0004g0021 a0001c0003t0004g0032 a0001c0003t0004g0039 a0002c0002t0002g0004 a0002c0002t0002g0012 a0002c0002t0002g0024 a0002c0002t0002g0031 a0002c0002t0002g0033 a0002c0005t0002g0023 a0004c0006t0002g0037	121	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(118): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00609.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp2 HG00741.hp2 HG01071.hp2 HG01074.hp1 HG01106.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02083.hp2 HG02132.hp2 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02300.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02683.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp2 HG03195.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18906.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp1 NA18945.hp2 NA18951.hp1 NA18954.hp1 NA18955.hp2 NA18963.hp1 NA18966.hp1 NA18984.hp2 NA18986.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA19000.hp1 NA19030.hp2 NA19054.hp2 NA19060.hp2 NA19063.hp2 NA19078.hp1 NA19079.hp1 NA19087.hp1 NA19090.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-21+501C>T c.-21+501C>T	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806100
chr1:152806108	C C	T T	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-21+493G>A c.-21+493G>A	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806108
chr1:152806167	A A	C C	1	a0001c0003t0003g0026 a0001c0003t0003g0026	1	NA18954.hp1 NA18954.hp1	intron_variant	MODIFIER	c.-21+434T>G c.-21+434T>G	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806167
chr1:152806341	T T	A A	12	a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0035 others(9): Show a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0003t0004g0039 a0002c0002t0002g0002 a0002c0002t0002g0004 a0002c0002t0002g0008 a0002c0002t0002g0024 a0002c0005t0002g0023 a0004c0006t0002g0037	119	HG00140.hp1 HG00408.hp1 HG00544.hp2 others(116): Show HG00140.hp1 HG00408.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01106.hp2 HG01175.hp2 HG01192.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02293.hp1 HG02300.hp2 HG02486.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02723.hp2 HG02738.hp2 HG02818.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp1 HG02976.hp2 HG03195.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18747.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp1 NA18943.hp1 NA18947.hp1 NA18949.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18955.hp2 NA18956.hp2 NA18957.hp2 NA18961.hp2 NA18963.hp1 NA18965.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18984.hp2 NA18985.hp1 NA18987.hp1 NA18994.hp2 NA18999.hp1 NA19000.hp1 NA19007.hp1 NA19011.hp2 NA19012.hp1 NA19054.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19074.hp1 NA19075.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp1 NA19090.hp1 NA20129.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-21+260A>T c.-21+260A>T	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806341
chr1:152806374	TA TA	T T	9	a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0041 others(6): Show a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0003t0003g0043 a0001c0003t0004g0021 a0002c0002t0002g0012 a0002c0002t0005g0020 a0002c0002t0005g0040	31	HG02055.hp1 HG02055.hp2 HG02145.hp1 others(28): Show HG02055.hp1 HG02055.hp2 HG02145.hp1 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02809.hp2 HG02818.hp2 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03486.hp1 HG03516.hp1 HG03540.hp2 NA18522.hp1 NA19030.hp1 NA19030.hp2 NA19240.hp2	intron_variant	MODIFIER	c.-21+226delT c.-21+226delT	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806374
chr1:152806385	T T	C C	9	a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0041 others(6): Show a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0003t0003g0043 a0001c0003t0004g0021 a0002c0002t0002g0012 a0002c0002t0005g0020 a0002c0002t0005g0040	31	HG02055.hp1 HG02055.hp2 HG02145.hp1 others(28): Show HG02055.hp1 HG02055.hp2 HG02145.hp1 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02809.hp2 HG02818.hp2 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03486.hp1 HG03516.hp1 HG03540.hp2 NA18522.hp1 NA19030.hp1 NA19030.hp2 NA19240.hp2	intron_variant	MODIFIER	c.-21+216A>G c.-21+216A>G	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806385
chr1:152806409	A A	T T	1	a0001c0001t0001g0014 a0001c0001t0001g0014	3	HG00738.hp2 HG01361.hp1 HG03490.hp1 HG00738.hp2 HG01361.hp1 HG03490.hp1	intron_variant	MODIFIER	c.-21+192T>A c.-21+192T>A	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806409
chr1:152806558	C C	T T	2	a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0001g0013 a0001c0001t0001g0025	4	HG02055.hp1 HG02895.hp2 HG02897.hp2 others(1): Show HG02055.hp1 HG02895.hp2 HG02897.hp2 HG03471.hp2	intron_variant	MODIFIER	c.-21+43G>A c.-21+43G>A	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	1/1	chr1	152806558

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 4)

CCoding Level Haplotype Info (Total: 6)

TTranscript Level Haplotype Info (Total: 6)

GGenebody Level Haplotype Info (Total: 43)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 6)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 10)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 43)

Haplotype Details by Sample (Haploid Level) (Total: 422)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 3)

CCoding Level Variants (Synonymous Mutations) (Total: 2)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 5)

GGenebody Level Haplotype Variants (Intron) (Total: 18)

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Annotation (Repeats)

Annotation (SNP Array)