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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   ATG16L1_chr2_233246673_233300669  ATG16L1_chr2_233246673_233300669 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 55054
ensemblid ENSG00000085978.22
hgncid 21498
symbol ATG16L1
name autophagy related 16 like 1
refseq_nuc NM_030803.7
refseq_prot NP_110430.5
ensembl_nuc ENST00000392017.9
ensembl_prot ENSP00000375872.4
mane_status MANE Select
chr chr2
start 233251673
end 233295669
strand +
ver v1.2
region chr2:233251673-233295669
region5000 chr2:233246673-233300669
regionname0 ATG16L1_chr2_233251673_233295669
regionname5000 ATG16L1_chr2_233246673_233300669

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 607 228 61 30 105 8 22 85 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002 0/0 607 118 33 24 42 6 13 29 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0003 0/0 607 6 0 0 6 0 0 5 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0004 0/0 607 1 0 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0005 0/0 607 1 0 0 1 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 1824 223 57 30 105 8 21 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
c0002 0/0 1824 111 31 21 41 5 13 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
c0003 0/0 1824 6 0 0 6 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
c0004 0/0 1824 6 2 3 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
c0005 0/0 1824 4 4 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
c0006 0/0 1824 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
c0007 0/0 1824 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
c0008 0/0 1824 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
c0009 0/0 1824 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 1/1 1475 106 9 20 67 1 7 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0002 0/0 1474 74 19 23 14 6 12 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0003 0/0 1475 72 32 8 19 6 7 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0004 0/0 1475 31 8 2 15 1 5 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0005 0/0 1474 29 0 0 28 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0006 0/0 1475 9 9 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0007 0/0 1475 9 0 0 8 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0008 0/0 1475 4 4 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0009 0/0 1475 3 3 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0010 0/0 1474 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0011 0/0 1475 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0012 0/0 1475 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0013 0/0 1474 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0014 0/0 1474 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0015 0/0 1475 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0016 0/0 1475 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0017 0/0 1475 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0018 0/0 1474 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0019 0/0 1475 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0020 0/0 1475 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0021 0/0 1475 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0022 0/0 1475 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
t0023 0/0 1475 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 16 0 2 9 0 5 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0002 0/0 6 1 2 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0003 0/0 5 0 0 5 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0004 0/0 4 0 4 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0005 0/1 4 0 1 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0006 0/0 4 0 0 4 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0007 0/0 4 4 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0008 0/0 3 0 0 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0009 0/0 3 3 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0010 0/0 3 0 0 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0011 0/0 3 0 0 2 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0012 0/0 3 0 0 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0013 0/0 3 0 0 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0014 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0015 0/0 2 0 1 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0016 0/0 2 0 0 0 1 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0017 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0018 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0019 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0020 0/0 2 0 0 0 2 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0021 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0022 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0023 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0024 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0025 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0026 0/0 2 0 2 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0027 0/0 2 0 1 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0028 0/0 2 0 2 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0029 0/0 2 0 1 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0030 0/0 2 0 0 1 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0031 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0032 0/0 2 0 0 0 1 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0033 0/0 2 0 0 0 0 2 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0034 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0035 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0036 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0037 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0038 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0039 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0040 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0041 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0042 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0043 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0044 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0045 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0046 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0047 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0048 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0049 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0050 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0051 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0052 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0053 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0054 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0055 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0056 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0057 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0058 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0059 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0060 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0061 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0062 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0063 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0064 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0065 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0066 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0067 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0068 1/0 1 0 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0069 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0070 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0071 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0072 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0073 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0074 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0075 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0076 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0077 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0078 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0079 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0080 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0081 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0082 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0083 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0084 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0085 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0086 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0087 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0088 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0089 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0090 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0091 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0092 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0093 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0094 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0095 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0096 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0097 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0098 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0099 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0100 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0101 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0102 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0103 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0104 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0105 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0106 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0107 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0108 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0109 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0110 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0111 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0112 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0113 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0114 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0115 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0116 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0117 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0118 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0119 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0120 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0121 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0122 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0123 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0124 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0125 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0126 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0127 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0128 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0129 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0130 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0131 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0132 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0133 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0134 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0135 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0136 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0137 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0138 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0139 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0140 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0141 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0142 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0143 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0144 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0145 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0146 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0147 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0148 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0149 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0150 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0151 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0152 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0153 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0154 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0155 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0156 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0157 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0158 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0159 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0160 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0161 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0162 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0163 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0164 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0165 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0166 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0167 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0168 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0169 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0170 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0171 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0172 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0173 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0174 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0175 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0176 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0177 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0178 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0179 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0180 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0181 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0182 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0183 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0184 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0185 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0186 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0187 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0188 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0189 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0190 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0191 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0192 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0193 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0194 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0195 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0196 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0197 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0198 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0199 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0200 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0201 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0202 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0203 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0204 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0205 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0206 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0207 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0208 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0209 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0210 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0211 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0212 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0213 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0214 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0215 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0216 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0217 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0218 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0219 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0220 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0221 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0222 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0223 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0224 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0225 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0226 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0227 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0228 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0229 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0230 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0231 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0232 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0233 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0234 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0235 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0236 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0237 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0238 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0239 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0240 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0241 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0242 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0243 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0244 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0245 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0246 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0247 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0248 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0249 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0250 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0251 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0252 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0253 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0254 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0255 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0256 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0257 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0258 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0259 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0260 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0261 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0262 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0263 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0264 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0265 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0266 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0267 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0268 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0269 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0270 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0271 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0272 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0273 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0274 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0275 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0276 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0277 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0278 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0279 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0280 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0281 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0282 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0283 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
g0284 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/1 1824 223 57 30 105 8 21 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0005 0/0 1824 4 4 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0007 0/0 1824 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002 0/0 1824 111 31 21 41 5 13 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0004 0/0 1824 6 2 3 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0008 0/0 1824 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0003c0003 0/0 1824 6 0 0 6 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0004c0009 0/0 1824 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0005c0006 0/0 1824 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 1/1 3298 106 9 20 67 1 7 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0003 0/0 3298 66 28 8 18 6 6 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0004 0/0 3298 31 8 2 15 1 5 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0007 0/0 3298 3 0 0 2 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0008 0/0 3298 4 4 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0009 0/0 3298 3 3 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0011 0/0 3298 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0012 0/0 3298 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0017 0/0 3298 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0019 0/0 3298 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0020 0/0 3298 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0021 0/0 3298 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0022 0/0 3298 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0001t0023 0/0 3298 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0005t0003 0/0 3298 4 4 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0001c0007t0003 0/0 3298 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0002 0/0 3297 67 17 20 14 5 11 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0005 0/0 3297 28 0 0 27 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0006 0/0 3298 9 9 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0010 0/0 3297 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0013 0/0 3297 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0014 0/0 3297 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0015 0/0 3298 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0016 0/0 3298 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0002t0018 0/0 3297 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0004t0002 0/0 3297 6 2 3 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0002c0008t0005 0/0 3297 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0003c0003t0007 0/0 3298 6 0 0 6 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0004c0009t0002 0/0 3297 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669
a0005c0006t0003 0/0 3298 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 copy fasta chr2 233246673 233300669

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 16 0 2 9 0 5 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0002 0/0 5 1 2 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0004 0/0 4 0 4 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0005 0/1 4 0 1 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0006 0/0 4 0 0 4 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0008 0/0 3 0 0 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0010 0/0 3 0 0 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0015 0/0 2 0 1 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0017 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0018 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0021 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0022 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0036 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0037 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0038 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0041 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0042 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0043 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0049 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0050 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0051 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0052 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0053 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0054 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0057 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0058 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0059 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0062 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0063 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0064 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0065 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0066 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0067 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0068 1/0 1 0 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0069 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0070 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0071 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0073 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0074 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0075 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0076 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0077 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0078 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0079 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0080 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0081 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0082 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0083 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0084 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0085 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0088 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0123 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0124 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0125 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0126 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0127 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0128 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0129 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0130 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0131 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0132 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0134 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0135 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0136 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0137 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0139 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0152 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0196 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0001g0197 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0007 0/0 4 4 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0009 0/0 3 3 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0011 0/0 3 0 0 2 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0016 0/0 2 0 0 0 1 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0019 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0020 0/0 2 0 0 0 2 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0045 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0046 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0047 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0048 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0055 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0091 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0093 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0094 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0095 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0096 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0098 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0099 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0100 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0101 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0115 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0119 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0120 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0121 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0122 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0141 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0147 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0150 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0153 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0158 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0159 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0160 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0161 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0163 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0164 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0165 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0166 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0167 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0168 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0169 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0171 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0174 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0175 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0176 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0177 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0178 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0179 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0180 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0181 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0185 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0186 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0187 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0188 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0190 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0191 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0003g0198 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0044 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0061 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0086 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0087 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0089 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0090 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0102 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0104 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0105 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0106 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0107 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0108 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0109 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0111 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0112 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0114 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0117 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0118 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0138 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0140 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0143 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0145 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0146 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0154 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0155 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0172 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0173 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0192 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0193 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0194 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0004g0195 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0007g0003 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0007g0148 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0007g0156 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0008g0039 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0008g0040 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0008g0103 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0008g0113 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0009g0060 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0009g0072 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0009g0133 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0011g0014 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0012g0116 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0012g0142 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0017g0002 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0019g0170 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0020g0151 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0021g0144 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0022g0056 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0001t0023g0110 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0005t0003g0092 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0005t0003g0182 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0005t0003g0183 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0005t0003g0184 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0001c0007t0003g0097 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0023 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0024 0/0 2 2 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0026 0/0 2 0 2 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0027 0/0 2 0 1 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0028 0/0 2 0 2 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0029 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0030 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0032 0/0 2 0 0 0 1 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0033 0/0 2 0 0 0 0 2 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0034 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0199 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0200 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0201 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0210 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0213 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0215 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0216 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0218 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0219 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0220 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0221 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0222 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0223 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0224 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0225 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0226 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0227 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0228 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0229 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0231 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0232 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0233 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0234 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0236 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0237 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0238 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0239 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0242 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0243 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0244 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0245 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0246 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0247 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0249 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0250 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0251 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0258 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0261 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0262 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0263 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0264 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0267 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0268 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0269 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0270 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0271 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0276 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0280 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0002g0281 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0012 0/0 3 0 0 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0013 0/0 3 0 0 3 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0025 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0029 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0030 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0031 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0035 0/0 2 0 0 2 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0211 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0212 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0214 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0230 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0235 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0240 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0241 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0248 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0256 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0257 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0259 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0260 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0277 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0278 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0005g0279 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0203 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0252 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0253 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0254 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0272 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0273 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0274 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0275 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0006g0282 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0010g0217 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0010g0283 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0013g0265 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0014g0255 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0015g0202 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0016g0284 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0002t0018g0189 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0004t0002g0204 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0004t0002g0205 0/0 1 1 0 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0004t0002g0206 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0004t0002g0207 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0004t0002g0208 0/0 1 0 0 0 1 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0004t0002g0209 0/0 1 0 1 0 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0002c0008t0005g0031 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0003c0003t0007g0003 0/0 4 0 0 4 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0003c0003t0007g0149 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0003c0003t0007g0157 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0004c0009t0002g0266 0/0 1 0 0 0 0 1 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
a0005c0006t0003g0162 0/0 1 0 0 1 0 0 ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0002 c0004 t0002 g0208 EUR GBR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00099 hp2 a0002 c0002 t0002 g0251 EUR GBR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00140 hp1 a0002 c0002 t0002 g0232 EUR GBR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00140 hp2 a0001 c0001 t0003 g0016 EUR GBR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00280 hp1 a0001 c0001 t0003 g0011 EUR FIN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00280 hp2 a0002 c0002 t0002 g0030 EUR FIN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00323 hp1 a0001 c0001 t0003 g0055 EUR FIN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00323 hp2 a0001 c0001 t0003 g0101 EUR FIN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00408 hp1 a0002 c0002 t0002 g0234 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00408 hp2 a0001 c0001 t0001 g0076 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00423 hp1 a0001 c0001 t0001 g0074 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00423 hp2 a0001 c0001 t0003 g0174 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00558 hp1 a0002 c0002 t0005 g0230 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00558 hp2 a0001 c0001 t0001 g0002 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00621 hp1 a0003 c0003 t0007 g0003 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00621 hp2 a0001 c0001 t0001 g0002 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00639 hp1 a0002 c0004 t0002 g0206 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00639 hp2 a0001 c0001 t0001 g0057 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00642 hp1 a0002 c0002 t0002 g0262 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00642 hp2 a0002 c0002 t0002 g0213 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00673 hp1 a0002 c0002 t0005 g0035 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00673 hp2 a0001 c0001 t0001 g0052 EAS CHS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00733 hp1 a0001 c0001 t0001 g0001 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00733 hp2 a0001 c0001 t0004 g0107 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00735 hp1 a0002 c0002 t0002 g0029 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00735 hp2 a0001 c0001 t0001 g0005 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00738 hp1 a0001 c0001 t0001 g0036 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00738 hp2 a0001 c0001 t0003 g0091 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00741 hp1 a0001 c0001 t0004 g0109 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG00741 hp2 a0002 c0002 t0002 g0269 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01069 hp1 a0002 c0002 t0002 g0028 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01069 hp2 a0002 c0002 t0002 g0026 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01070 hp1 a0002 c0002 t0002 g0224 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01070 hp2 a0001 c0001 t0001 g0127 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01071 hp1 a0002 c0002 t0002 g0225 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01071 hp2 a0002 c0002 t0002 g0028 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01081 hp1 a0001 c0001 t0001 g0002 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01081 hp2 a0001 c0001 t0003 g0153 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01099 hp1 a0001 c0001 t0001 g0079 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01099 hp2 a0002 c0002 t0002 g0233 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01109 hp1 a0001 c0001 t0003 g0120 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01109 hp2 a0002 c0002 t0002 g0228 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01168 hp1 a0001 c0001 t0001 g0050 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01168 hp2 a0001 c0001 t0003 g0175 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01169 hp1 a0001 c0001 t0001 g0004 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01169 hp2 a0001 c0001 t0001 g0082 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01175 hp1 a0002 c0004 t0002 g0207 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01175 hp2 a0002 c0002 t0002 g0250 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01192 hp1 a0001 c0001 t0001 g0004 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01192 hp2 a0002 c0002 t0002 g0271 AMR PUR ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01255 hp1 a0002 c0002 t0002 g0238 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01255 hp2 a0001 c0001 t0003 g0163 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01256 hp1 a0002 c0002 t0002 g0231 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01256 hp2 a0001 c0001 t0001 g0001 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01257 hp1 a0002 c0002 t0002 g0026 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01257 hp2 a0001 c0001 t0001 g0002 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01261 hp1 a0001 c0001 t0003 g0100 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01261 hp2 a0002 c0002 t0002 g0270 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01346 hp1 a0001 c0001 t0001 g0066 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01346 hp2 a0002 c0002 t0002 g0276 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01358 hp1 a0002 c0002 t0016 g0284 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01358 hp2 a0001 c0001 t0001 g0131 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01496 hp1 a0001 c0001 t0001 g0015 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01496 hp2 a0002 c0004 t0002 g0209 AMR CLM ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01516 hp1 a0001 c0001 t0003 g0020 EUR IBS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01516 hp2 a0002 c0002 t0002 g0032 EUR IBS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01517 hp1 a0001 c0001 t0003 g0020 EUR IBS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01517 hp2 a0002 c0002 t0002 g0245 EUR IBS ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01884 hp1 a0001 c0001 t0001 g0002 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01884 hp2 a0002 c0002 t0002 g0222 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01891 hp1 a0001 c0001 t0003 g0094 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01891 hp2 a0002 c0002 t0002 g0242 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01943 hp1 a0001 c0001 t0003 g0160 AMR PEL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01943 hp2 a0001 c0001 t0001 g0004 AMR PEL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01978 hp1 a0001 c0001 t0003 g0180 AMR PEL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01978 hp2 a0002 c0002 t0002 g0227 AMR PEL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01981 hp1 a0001 c0001 t0001 g0004 AMR PEL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG01981 hp2 a0001 c0001 t0001 g0085 AMR PEL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02040 hp1 a0001 c0001 t0001 g0001 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02040 hp2 a0002 c0002 t0005 g0235 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02055 hp1 a0001 c0001 t0011 g0014 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02055 hp2 a0001 c0001 t0001 g0042 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02071 hp1 a0001 c0001 t0001 g0059 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02071 hp2 a0002 c0002 t0005 g0013 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02074 hp1 a0001 c0001 t0020 g0151 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02074 hp2 a0001 c0001 t0001 g0067 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02080 hp1 a0001 c0001 t0003 g0185 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02080 hp2 a0001 c0001 t0001 g0065 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02083 hp1 a0002 c0002 t0002 g0263 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02083 hp2 a0001 c0001 t0007 g0148 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02129 hp1 a0001 c0001 t0001 g0078 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02129 hp2 a0002 c0008 t0005 g0031 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02132 hp1 a0001 c0001 t0007 g0003 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02132 hp2 a0002 c0002 t0002 g0243 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02135 hp1 a0001 c0001 t0003 g0187 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02135 hp2 a0002 c0002 t0005 g0012 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02145 hp1 a0002 c0002 t0006 g0273 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02145 hp2 a0001 c0001 t0012 g0142 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02155 hp1 a0001 c0001 t0001 g0005 EAS CDX ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02155 hp2 a0002 c0002 t0002 g0280 EAS CDX ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02165 hp1 a0001 c0001 t0001 g0041 EAS CDX ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02165 hp2 a0002 c0002 t0005 g0248 EAS CDX ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02257 hp1 a0002 c0002 t0010 g0217 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02257 hp2 a0002 c0002 t0002 g0023 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02258 hp1 a0002 c0004 t0002 g0204 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02258 hp2 a0001 c0001 t0003 g0171 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02280 hp1 a0001 c0001 t0001 g0196 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02280 hp2 a0002 c0002 t0006 g0253 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02300 hp1 a0002 c0002 t0002 g0027 AMR PEL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02300 hp2 a0001 c0001 t0001 g0137 AMR PEL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02523 hp1 a0002 c0002 t0002 g0034 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02523 hp2 a0002 c0002 t0002 g0258 EAS KHV ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02615 hp1 a0002 c0002 t0002 g0229 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02615 hp2 a0001 c0001 t0004 g0112 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02622 hp1 a0001 c0001 t0001 g0022 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02622 hp2 a0002 c0002 t0002 g0220 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02630 hp1 a0002 c0002 t0013 g0265 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02630 hp2 a0002 c0002 t0006 g0252 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02647 hp1 a0001 c0001 t0003 g0122 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02647 hp2 a0001 c0001 t0008 g0113 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02683 hp1 a0001 c0001 t0003 g0198 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02683 hp2 a0001 c0001 t0001 g0038 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02698 hp1 a0001 c0001 t0001 g0001 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02698 hp2 a0002 c0002 t0002 g0244 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02717 hp1 a0001 c0001 t0021 g0144 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02717 hp2 a0002 c0002 t0002 g0199 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02723 hp1 a0002 c0002 t0006 g0203 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02723 hp2 a0002 c0002 t0002 g0237 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02735 hp1 a0001 c0001 t0001 g0001 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02735 hp2 a0002 c0002 t0002 g0033 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02809 hp1 a0002 c0002 t0018 g0189 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02809 hp2 a0001 c0001 t0003 g0190 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02818 hp1 a0001 c0001 t0004 g0145 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02818 hp2 a0001 c0001 t0003 g0099 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02886 hp1 a0001 c0001 t0003 g0119 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02886 hp2 a0002 c0002 t0006 g0275 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02895 hp1 a0002 c0002 t0006 g0272 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02895 hp2 a0001 c0001 t0003 g0047 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02896 hp1 a0001 c0001 t0009 g0133 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02896 hp2 a0002 c0002 t0002 g0219 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02897 hp1 a0001 c0001 t0009 g0072 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02897 hp2 a0001 c0001 t0003 g0048 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02922 hp1 a0001 c0001 t0003 g0009 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02922 hp2 a0001 c0001 t0012 g0116 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02965 hp1 a0001 c0001 t0004 g0194 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02965 hp2 a0001 c0005 t0003 g0092 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02970 hp1 a0001 c0001 t0003 g0141 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02970 hp2 a0002 c0002 t0002 g0221 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02976 hp1 a0001 c0001 t0003 g0009 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02976 hp2 a0001 c0001 t0004 g0044 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03017 hp1 a0001 c0001 t0003 g0169 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03017 hp2 a0001 c0001 t0001 g0001 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03041 hp1 a0002 c0002 t0002 g0024 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03041 hp2 a0001 c0001 t0001 g0021 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03098 hp1 a0001 c0001 t0011 g0014 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03098 hp2 a0002 c0002 t0006 g0274 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03130 hp1 a0001 c0001 t0003 g0009 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03130 hp2 a0001 c0001 t0004 g0143 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03139 hp1 a0001 c0001 t0003 g0095 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03139 hp2 a0001 c0001 t0001 g0021 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03195 hp1 a0001 c0001 t0004 g0111 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03195 hp2 a0002 c0002 t0002 g0024 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03209 hp1 a0002 c0002 t0002 g0200 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03209 hp2 a0002 c0002 t0010 g0283 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03225 hp1 a0001 c0001 t0003 g0093 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03225 hp2 a0002 c0002 t0002 g0201 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03239 hp1 a0001 c0001 t0004 g0118 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03239 hp2 a0002 c0002 t0002 g0246 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03453 hp1 a0001 c0001 t0003 g0115 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03453 hp2 a0001 c0001 t0003 g0007 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03486 hp1 a0001 c0001 t0003 g0007 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03486 hp2 a0002 c0002 t0015 g0202 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03490 hp1 a0002 c0002 t0002 g0027 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03490 hp2 a0001 c0001 t0004 g0117 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03491 hp1 a0001 c0001 t0023 g0110 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03491 hp2 a0002 c0002 t0002 g0236 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03516 hp1 a0001 c0001 t0008 g0040 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03516 hp2 a0001 c0001 t0008 g0103 AFR ESN ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03540 hp1 a0001 c0001 t0003 g0121 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03540 hp2 a0001 c0001 t0004 g0114 AFR GWD ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03579 hp1 a0001 c0001 t0004 g0105 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03579 hp2 a0002 c0002 t0002 g0023 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03654 hp1 a0001 c0001 t0001 g0001 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03654 hp2 a0002 c0002 t0002 g0226 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03669 hp1 a0001 c0001 t0004 g0106 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03669 hp2 a0001 c0001 t0007 g0156 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03688 hp1 a0004 c0009 t0002 g0266 SAS STU ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03688 hp2 a0002 c0002 t0002 g0261 SAS STU ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03704 hp1 a0001 c0001 t0003 g0165 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03704 hp2 a0001 c0001 t0004 g0192 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03710 hp1 a0001 c0001 t0003 g0016 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03710 hp2 a0002 c0002 t0002 g0239 SAS PJL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03831 hp1 a0002 c0002 t0005 g0212 SAS BEB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03831 hp2 a0002 c0002 t0002 g0210 SAS BEB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG04115 hp1 a0001 c0001 t0003 g0177 SAS STU ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG04115 hp2 a0002 c0002 t0002 g0032 SAS STU ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG04184 hp1 a0001 c0001 t0003 g0176 SAS BEB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG04184 hp2 a0002 c0002 t0014 g0255 SAS BEB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG04199 hp1 a0001 c0007 t0003 g0097 SAS STU ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG04199 hp2 a0001 c0001 t0001 g0124 SAS STU ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG04228 hp1 a0002 c0002 t0002 g0033 SAS STU ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG04228 hp2 a0001 c0001 t0004 g0102 SAS STU ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18522 hp1 a0001 c0001 t0003 g0147 AFR YRI ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18522 hp2 a0001 c0001 t0003 g0007 AFR YRI ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18612 hp1 a0001 c0001 t0001 g0017 EAS CHB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18612 hp2 a0001 c0001 t0001 g0081 EAS CHB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18906 hp1 a0001 c0001 t0003 g0046 AFR YRI ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18906 hp2 a0001 c0001 t0008 g0039 AFR YRI ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18939 hp1 a0002 c0002 t0002 g0034 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18939 hp2 a0001 c0001 t0001 g0132 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18940 hp1 a0001 c0001 t0003 g0011 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18940 hp2 a0001 c0001 t0001 g0070 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18944 hp1 a0001 c0001 t0004 g0104 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18944 hp2 a0001 c0001 t0001 g0001 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18946 hp1 a0001 c0001 t0004 g0146 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18946 hp2 a0001 c0001 t0001 g0001 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18947 hp1 a0002 c0002 t0005 g0260 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18947 hp2 a0001 c0001 t0003 g0166 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18948 hp1 a0002 c0002 t0005 g0013 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18948 hp2 a0001 c0001 t0001 g0006 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18950 hp1 a0001 c0001 t0001 g0125 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18950 hp2 a0002 c0002 t0005 g0012 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18951 hp1 a0002 c0002 t0005 g0012 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18951 hp2 a0001 c0001 t0001 g0001 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18952 hp1 a0001 c0001 t0003 g0164 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18952 hp2 a0001 c0001 t0001 g0018 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18953 hp1 a0001 c0001 t0003 g0186 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18953 hp2 a0001 c0001 t0017 g0002 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18954 hp1 a0001 c0001 t0001 g0008 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18954 hp2 a0002 c0002 t0002 g0281 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18956 hp1 a0001 c0001 t0003 g0179 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18956 hp2 a0001 c0001 t0001 g0136 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18957 hp1 a0002 c0002 t0005 g0279 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18957 hp2 a0001 c0001 t0001 g0073 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18959 hp1 a0001 c0001 t0004 g0089 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18959 hp2 a0001 c0001 t0001 g0049 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18963 hp1 a0001 c0001 t0001 g0083 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18963 hp2 a0002 c0002 t0005 g0029 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18966 hp1 a0001 c0001 t0001 g0001 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18966 hp2 a0001 c0001 t0004 g0172 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18968 hp1 a0001 c0001 t0004 g0173 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18968 hp2 a0001 c0001 t0003 g0188 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18969 hp1 a0002 c0002 t0002 g0264 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18969 hp2 a0001 c0001 t0001 g0001 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18971 hp1 a0002 c0002 t0005 g0030 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18971 hp2 a0001 c0001 t0001 g0001 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18972 hp1 a0002 c0002 t0005 g0214 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18972 hp2 a0001 c0001 t0001 g0152 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18974 hp1 a0001 c0001 t0004 g0090 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18974 hp2 a0003 c0003 t0007 g0003 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18977 hp1 a0001 c0001 t0004 g0138 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18977 hp2 a0001 c0001 t0001 g0010 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18979 hp1 a0001 c0001 t0004 g0155 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18979 hp2 a0001 c0001 t0004 g0087 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18981 hp1 a0001 c0001 t0004 g0193 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18981 hp2 a0002 c0002 t0005 g0259 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18982 hp1 a0001 c0001 t0001 g0130 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18982 hp2 a0001 c0001 t0001 g0053 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18983 hp1 a0001 c0001 t0001 g0063 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18983 hp2 a0002 c0002 t0002 g0216 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18984 hp1 a0001 c0001 t0001 g0084 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18984 hp2 a0001 c0001 t0001 g0069 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18985 hp1 a0001 c0001 t0004 g0086 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18985 hp2 a0001 c0001 t0022 g0056 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18986 hp1 a0001 c0001 t0003 g0019 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18986 hp2 a0001 c0001 t0001 g0008 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18987 hp1 a0002 c0002 t0005 g0013 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18987 hp2 a0001 c0001 t0001 g0054 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18989 hp1 a0001 c0001 t0004 g0140 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18989 hp2 a0002 c0002 t0002 g0247 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18990 hp1 a0001 c0001 t0003 g0161 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18990 hp2 a0002 c0002 t0005 g0025 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18991 hp1 a0001 c0001 t0001 g0006 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18991 hp2 a0003 c0003 t0007 g0149 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18992 hp1 a0002 c0002 t0002 g0267 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18992 hp2 a0001 c0001 t0001 g0017 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18994 hp1 a0001 c0001 t0003 g0158 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18994 hp2 a0001 c0001 t0001 g0010 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18999 hp1 a0001 c0001 t0001 g0077 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA18999 hp2 a0001 c0001 t0001 g0058 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19000 hp1 a0002 c0002 t0005 g0241 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19000 hp2 a0001 c0001 t0001 g0010 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19001 hp1 a0005 c0006 t0003 g0162 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19001 hp2 a0003 c0003 t0007 g0003 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19004 hp1 a0001 c0001 t0003 g0167 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19004 hp2 a0001 c0001 t0001 g0018 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19005 hp1 a0001 c0001 t0001 g0008 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19005 hp2 a0002 c0002 t0005 g0278 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19010 hp1 a0001 c0001 t0001 g0062 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19010 hp2 a0002 c0002 t0005 g0211 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19011 hp1 a0001 c0001 t0001 g0006 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19011 hp2 a0001 c0001 t0001 g0080 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19012 hp1 a0001 c0001 t0001 g0135 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19012 hp2 a0001 c0001 t0001 g0134 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19030 hp1 a0002 c0002 t0006 g0282 AFR LWK ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19030 hp2 a0001 c0001 t0003 g0150 AFR LWK ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19043 hp1 a0001 c0001 t0001 g0197 AFR LWK ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19043 hp2 a0001 c0005 t0003 g0184 AFR LWK ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19056 hp1 a0001 c0001 t0004 g0061 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19056 hp2 a0001 c0001 t0001 g0088 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19058 hp1 a0001 c0001 t0003 g0019 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19058 hp2 a0003 c0003 t0007 g0003 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19060 hp1 a0001 c0001 t0001 g0126 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19060 hp2 a0002 c0002 t0005 g0035 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19063 hp1 a0001 c0001 t0001 g0071 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19063 hp2 a0001 c0001 t0003 g0011 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19065 hp1 a0001 c0001 t0001 g0015 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19065 hp2 a0002 c0002 t0005 g0025 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19070 hp1 a0002 c0002 t0005 g0240 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19070 hp2 a0001 c0001 t0001 g0001 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19072 hp1 a0001 c0001 t0001 g0051 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19072 hp2 a0002 c0002 t0005 g0031 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19077 hp1 a0002 c0002 t0005 g0257 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19077 hp2 a0001 c0001 t0001 g0129 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19078 hp1 a0001 c0001 t0003 g0178 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19078 hp2 a0001 c0001 t0001 g0123 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19079 hp1 a0001 c0001 t0001 g0064 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19079 hp2 a0002 c0002 t0005 g0256 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19081 hp1 a0001 c0001 t0004 g0154 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19081 hp2 a0002 c0002 t0002 g0215 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19082 hp1 a0001 c0001 t0001 g0001 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19082 hp2 a0003 c0003 t0007 g0157 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19086 hp1 a0001 c0001 t0001 g0005 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19086 hp2 a0001 c0001 t0004 g0195 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19087 hp1 a0001 c0001 t0001 g0139 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19087 hp2 a0001 c0001 t0003 g0159 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19088 hp1 a0001 c0001 t0001 g0006 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19088 hp2 a0002 c0002 t0005 g0277 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19089 hp1 a0002 c0002 t0002 g0249 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19089 hp2 a0001 c0001 t0001 g0043 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19090 hp1 a0001 c0001 t0003 g0168 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19090 hp2 a0001 c0001 t0001 g0075 EAS JPT ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19240 hp1 a0001 c0001 t0003 g0007 AFR YRI ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA19240 hp2 a0002 c0002 t0002 g0218 AFR YRI ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA20129 hp1 a0001 c0001 t0001 g0128 AFR ASW ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA20129 hp2 a0001 c0005 t0003 g0183 AFR ASW ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA20752 hp1 a0001 c0001 t0004 g0108 EUR TSI ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA20752 hp2 a0001 c0001 t0001 g0037 EUR TSI ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA20905 hp1 a0001 c0001 t0001 g0001 SAS GIH ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA20905 hp2 a0001 c0001 t0019 g0170 SAS GIH ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02486 hp1 a0001 c0001 t0009 g0060 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02486 hp2 a0001 c0001 t0003 g0098 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02559 hp1 a0002 c0002 t0002 g0268 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG02559 hp2 a0001 c0001 t0003 g0191 AFR ACB ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03471 hp1 a0001 c0005 t0003 g0182 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG03471 hp2 a0002 c0002 t0002 g0223 AFR MSL ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG06807 hp1 a0001 c0001 t0003 g0045 AFR USA ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
HG06807 hp2 a0002 c0004 t0002 g0205 AFR USA ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA20300 hp1 a0001 c0001 t0003 g0181 AFR USA ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA20300 hp2 a0001 c0001 t0001 g0022 AFR USA ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA21309 hp1 a0002 c0002 t0006 g0254 AFR LWK ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
NA21309 hp2 a0001 c0001 t0003 g0096 AFR LWK ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
homoSapiens_chm13v2 hp1 a0001 c0001 t0001 g0005 REF REF ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669
homoSapiens_grch38 hp1 a0001 c0001 t0001 g0068 REF REF ATG16L1_chr2_233246673_233300669 ATG16L1 chr2 233246673 233300669

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr2:233270049 A
A
 G
G
 1 a0005
a0005
 1 NA19001.hp1
NA19001.hp1
 missense_variant MODERATE c.689A>G
c.689A>G
 p.Glu230Gly
p.Glu230Gly
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/18 844/3298 689/1824 230/607 chr2 233270049
chr2:233274722 A
A
 G
G
 2 a0002
a0004
a0002
a0004
 119 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(116): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 missense_variant MODERATE c.898A>G
c.898A>G
 p.Thr300Ala
p.Thr300Ala
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/18 1053/3298 898/1824 300/607 chr2 233274722
chr2:233290320 A
A
 G
G
 1 a0004
a0004
 1 HG03688.hp1
HG03688.hp1
 missense_variant MODERATE c.1397A>G
c.1397A>G
 p.His466Arg
p.His466Arg
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/18 1552/3298 1397/1824 466/607 chr2 233290320
chr2:233293276 C
C
 T
T
 1 a0003
a0003
 6 HG00621.hp1
NA18974.hp2
NA18991.hp2
others(3): Show 
HG00621.hp1
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 missense_variant MODERATE c.1649C>T
c.1649C>T
 p.Ala550Val
p.Ala550Val
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/18 1804/3298 1649/1824 550/607 chr2 233293276

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr2:233263166 A
A
 G
G
 1 a0002c0004
a0002c0004
 6 HG00099.hp1
HG00639.hp1
HG01175.hp1
others(3): Show 
HG00099.hp1
HG00639.hp1
HG01175.hp1
HG01496.hp2
HG02258.hp1
HG06807.hp2
 synonymous_variant LOW c.246A>G
c.246A>G
 p.Leu82Leu
p.Leu82Leu
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 3/18 401/3298 246/1824 82/607 chr2 233263166
chr2:233270047 G
G
 A
A
 1 a0005c0006
a0005c0006
 1 NA19001.hp1
NA19001.hp1
 synonymous_variant LOW c.687G>A
c.687G>A
 p.Lys229Lys
p.Lys229Lys
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/18 842/3298 687/1824 229/607 chr2 233270047
chr2:233290264 T
T
 C
C
 1 a0002c0008
a0002c0008
 1 HG02129.hp2
HG02129.hp2
 synonymous_variant LOW c.1341T>C
c.1341T>C
 p.Phe447Phe
p.Phe447Phe
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/18 1496/3298 1341/1824 447/607 chr2 233290264
chr2:233293301 G
G
 A
A
 1 a0001c0007
a0001c0007
 1 HG04199.hp1
HG04199.hp1
 synonymous_variant LOW c.1674G>A
c.1674G>A
 p.Leu558Leu
p.Leu558Leu
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/18 1829/3298 1674/1824 558/607 chr2 233293301
chr2:233294314 C
C
 T
T
 1 a0001c0005
a0001c0005
 4 HG02965.hp2
HG03471.hp1
NA19043.hp2
others(1): Show 
HG02965.hp2
HG03471.hp1
NA19043.hp2
NA20129.hp2
 synonymous_variant LOW c.1788C>T
c.1788C>T
 p.Asp596Asp
p.Asp596Asp
 ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 1943/3298 1788/1824 596/607 chr2 233294314

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr2:233251690 C
C
 G
G
 1 a0001c0001t0009
a0001c0001t0009
 3 HG02486.hp1
HG02896.hp1
HG02897.hp1
HG02486.hp1
HG02896.hp1
HG02897.hp1
 5_prime_UTR_variant MODIFIER c.-138C>G
c.-138C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/18 138 chr2 233251690
chr2:233251699 T
T
 G
G
 11 a0002c0002t0002
a0002c0002t0005
a0002c0002t0006
others(8): Show 
a0002c0002t0002
a0002c0002t0005
a0002c0002t0006
a0002c0002t0010
a0002c0002t0013
a0002c0002t0014
a0002c0002t0015
a0002c0002t0016
a0002c0004t0002
a0002c0008t0005
a0004c0009t0002
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 5_prime_UTR_variant MODIFIER c.-129T>G
c.-129T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/18 129 chr2 233251699
chr2:233251732 G
G
 C
C
 1 a0002c0002t0010
a0002c0002t0010
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 5_prime_UTR_variant MODIFIER c.-96G>C
c.-96G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/18 96 chr2 233251732
chr2:233294522 G
G
 A
A
 1 a0001c0001t0017
a0001c0001t0017
 1 NA18953.hp2
NA18953.hp2
 3_prime_UTR_variant MODIFIER c.*172G>A
c.*172G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 172 chr2 233294522
chr2:233294587 C
C
 A
A
 2 a0002c0002t0005
a0002c0008t0005
a0002c0002t0005
a0002c0008t0005
 29 HG00558.hp1
HG00673.hp1
HG02040.hp2
others(26): Show 
HG00558.hp1
HG00673.hp1
HG02040.hp2
HG02071.hp2
HG02129.hp2
HG02135.hp2
HG02165.hp2
HG03831.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18957.hp1
NA18963.hp2
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18987.hp1
NA18990.hp2
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19088.hp2
 3_prime_UTR_variant MODIFIER c.*237C>A
c.*237C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 237 chr2 233294587
chr2:233294610 A
A
 G
G
 1 a0001c0001t0023
a0001c0001t0023
 1 HG03491.hp1
HG03491.hp1
 3_prime_UTR_variant MODIFIER c.*260A>G
c.*260A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 260 chr2 233294610
chr2:233294745 C
C
 T
T
 1 a0001c0001t0022
a0001c0001t0022
 1 NA18985.hp2
NA18985.hp2
 3_prime_UTR_variant MODIFIER c.*395C>T
c.*395C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 395 chr2 233294745
chr2:233294772 A
A
 C
C
 1 a0001c0001t0021
a0001c0001t0021
 1 HG02717.hp1
HG02717.hp1
 3_prime_UTR_variant MODIFIER c.*422A>C
c.*422A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 422 chr2 233294772
chr2:233294829 C
C
 T
T
 1 a0001c0001t0012
a0001c0001t0012
 2 HG02145.hp2
HG02922.hp2
HG02145.hp2
HG02922.hp2
 3_prime_UTR_variant MODIFIER c.*479C>T
c.*479C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 479 chr2 233294829
chr2:233294836 C
C
 A
A
 1 a0002c0002t0013
a0002c0002t0013
 1 HG02630.hp1
HG02630.hp1
 3_prime_UTR_variant MODIFIER c.*486C>A
c.*486C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 486 chr2 233294836
chr2:233294897 T
T
 C
C
 3 a0001c0001t0004
a0001c0001t0021
a0001c0001t0023
a0001c0001t0004
a0001c0001t0021
a0001c0001t0023
 33 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(30): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02965.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA19086.hp2
NA20752.hp1
 3_prime_UTR_variant MODIFIER c.*547T>C
c.*547T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 547 chr2 233294897
chr2:233294901 T
T
 C
C
 26 a0001c0001t0003
a0001c0001t0004
a0001c0001t0007
others(23): Show 
a0001c0001t0003
a0001c0001t0004
a0001c0001t0007
a0001c0001t0008
a0001c0001t0009
a0001c0001t0011
a0001c0001t0012
a0001c0001t0019
a0001c0001t0021
a0001c0001t0023
a0001c0005t0003
a0001c0007t0003
a0002c0002t0002
a0002c0002t0005
a0002c0002t0006
a0002c0002t0010
a0002c0002t0013
a0002c0002t0014
a0002c0002t0015
a0002c0002t0016
a0002c0002t0018
a0002c0004t0002
a0002c0008t0005
a0003c0003t0007
a0004c0009t0002
a0005c0006t0003
 245 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(242): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00621.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02083.hp2
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18906.hp2
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19058.hp2
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*551T>C
c.*551T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 551 chr2 233294901
chr2:233294932 TC
TC
 T
T
 9 a0002c0002t0002
a0002c0002t0005
a0002c0002t0010
others(6): Show 
a0002c0002t0002
a0002c0002t0005
a0002c0002t0010
a0002c0002t0013
a0002c0002t0014
a0002c0002t0018
a0002c0004t0002
a0002c0008t0005
a0004c0009t0002
 108 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(105): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*587delC
c.*587delC
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 587 INFO_REALIGN_3_PRIME chr2 233294932
chr2:233294937 C
C
 T
T
 1 a0001c0001t0019
a0001c0001t0019
 1 NA20905.hp2
NA20905.hp2
 3_prime_UTR_variant MODIFIER c.*587C>T
c.*587C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 587 chr2 233294937
chr2:233294951 T
T
 C
C
 9 a0002c0002t0002
a0002c0002t0005
a0002c0002t0010
others(6): Show 
a0002c0002t0002
a0002c0002t0005
a0002c0002t0010
a0002c0002t0013
a0002c0002t0014
a0002c0002t0018
a0002c0004t0002
a0002c0008t0005
a0004c0009t0002
 108 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(105): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*601T>C
c.*601T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 601 chr2 233294951
chr2:233295094 A
A
 G
G
 4 a0001c0001t0004
a0001c0001t0021
a0001c0001t0023
others(1): Show 
a0001c0001t0004
a0001c0001t0021
a0001c0001t0023
a0002c0002t0016
 34 HG00733.hp2
HG00741.hp1
HG01358.hp1
others(31): Show 
HG00733.hp2
HG00741.hp1
HG01358.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02965.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA19086.hp2
NA20752.hp1
 3_prime_UTR_variant MODIFIER c.*744A>G
c.*744A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 744 chr2 233295094
chr2:233295154 A
A
 G
G
 3 a0001c0001t0007
a0001c0001t0020
a0003c0003t0007
a0001c0001t0007
a0001c0001t0020
a0003c0003t0007
 10 HG00621.hp1
HG02074.hp1
HG02083.hp2
others(7): Show 
HG00621.hp1
HG02074.hp1
HG02083.hp2
HG02132.hp1
HG03669.hp2
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 3_prime_UTR_variant MODIFIER c.*804A>G
c.*804A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 804 chr2 233295154
chr2:233295230 C
C
 T
T
 3 a0001c0001t0004
a0001c0001t0021
a0001c0001t0023
a0001c0001t0004
a0001c0001t0021
a0001c0001t0023
 33 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(30): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02965.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA19086.hp2
NA20752.hp1
 3_prime_UTR_variant MODIFIER c.*880C>T
c.*880C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 880 chr2 233295230
chr2:233295251 C
C
 T
T
 1 a0002c0002t0015
a0002c0002t0015
 1 HG03486.hp2
HG03486.hp2
 3_prime_UTR_variant MODIFIER c.*901C>T
c.*901C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 901 chr2 233295251
chr2:233295456 G
G
 A
A
 1 a0002c0002t0014
a0002c0002t0014
 1 HG04184.hp2
HG04184.hp2
 3_prime_UTR_variant MODIFIER c.*1106G>A
c.*1106G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 1106 chr2 233295456
chr2:233295467 T
T
 C
C
 22 a0001c0001t0003
a0001c0001t0004
a0001c0001t0011
others(19): Show 
a0001c0001t0003
a0001c0001t0004
a0001c0001t0011
a0001c0001t0012
a0001c0001t0019
a0001c0001t0021
a0001c0001t0023
a0001c0005t0003
a0001c0007t0003
a0002c0002t0002
a0002c0002t0005
a0002c0002t0006
a0002c0002t0010
a0002c0002t0013
a0002c0002t0014
a0002c0002t0015
a0002c0002t0016
a0002c0002t0018
a0002c0004t0002
a0002c0008t0005
a0004c0009t0002
a0005c0006t0003
 229 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(226): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*1117T>C
c.*1117T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 1117 chr2 233295467
chr2:233295549 A
A
 C
C
 1 a0001c0001t0011
a0001c0001t0011
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 3_prime_UTR_variant MODIFIER c.*1199A>C
c.*1199A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 1199 chr2 233295549
chr2:233295583 G
G
 C
C
 1 a0001c0001t0011
a0001c0001t0011
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 3_prime_UTR_variant MODIFIER c.*1233G>C
c.*1233G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 18/18 1233 chr2 233295583

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr2:233251975 C
C
 T
T
 1 a0002c0002t0016g0284
a0002c0002t0016g0284
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.115+33C>T
c.115+33C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233251975
chr2:233252023 C
C
 G
G
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.115+81C>G
c.115+81C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233252023
chr2:233252556 T
T
 A
A
 5 a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
others(2): Show 
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0008g0039
a0001c0001t0008g0040
 5 HG00738.hp1
HG02683.hp2
HG03516.hp1
others(2): Show 
HG00738.hp1
HG02683.hp2
HG03516.hp1
NA18906.hp2
NA20752.hp2
 intron_variant MODIFIER c.115+614T>A
c.115+614T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233252556
chr2:233252557 A
A
 T
T
 1 a0001c0001t0003g0198
a0001c0001t0003g0198
 1 HG02683.hp1
HG02683.hp1
 intron_variant MODIFIER c.115+615A>T
c.115+615A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233252557
chr2:233252565 A
A
 T
T
 100 a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
others(97): Show 
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 113 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(110): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.115+623A>T
c.115+623A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233252565
chr2:233252802 G
G
 A
A
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.115+860G>A
c.115+860G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233252802
chr2:233252937 T
T
 C
C
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.115+995T>C
c.115+995T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233252937
chr2:233252946 A
A
 G
G
 4 a0001c0001t0001g0021
a0001c0001t0001g0022
a0001c0001t0001g0196
others(1): Show 
a0001c0001t0001g0021
a0001c0001t0001g0022
a0001c0001t0001g0196
a0001c0001t0001g0197
 6 HG02280.hp1
HG02622.hp1
HG03041.hp2
others(3): Show 
HG02280.hp1
HG02622.hp1
HG03041.hp2
HG03139.hp2
NA19043.hp1
NA20300.hp2
 intron_variant MODIFIER c.115+1004A>G
c.115+1004A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233252946
chr2:233252991 C
C
 T
T
 3 a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
 3 HG02965.hp1
NA18981.hp1
NA19086.hp2
HG02965.hp1
NA18981.hp1
NA19086.hp2
 intron_variant MODIFIER c.115+1049C>T
c.115+1049C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233252991
chr2:233253123 C
C
 T
T
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.115+1181C>T
c.115+1181C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253123
chr2:233253218 C
C
 T
T
 1 a0001c0001t0004g0192
a0001c0001t0004g0192
 1 HG03704.hp2
HG03704.hp2
 intron_variant MODIFIER c.115+1276C>T
c.115+1276C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253218
chr2:233253310 A
A
 C
C
 2 a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0190
a0001c0001t0003g0191
 2 HG02559.hp2
HG02809.hp2
HG02559.hp2
HG02809.hp2
 intron_variant MODIFIER c.115+1368A>C
c.115+1368A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253310
chr2:233253332 G
G
 GT
GT
 8 a0002c0002t0002g0024
a0002c0002t0002g0199
a0002c0002t0002g0200
others(5): Show 
a0002c0002t0002g0024
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
 9 HG02622.hp2
HG02717.hp2
HG02896.hp2
others(6): Show 
HG02622.hp2
HG02717.hp2
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp2
NA19240.hp2
 intron_variant MODIFIER c.115+1397dupT
c.115+1397dupT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253332
chr2:233253332 G
G
 GTT
GTT
 37 a0002c0002t0002g0023
a0002c0002t0002g0026
a0002c0002t0002g0027
others(34): Show 
a0002c0002t0002g0023
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0005g0025
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
 41 HG00099.hp2
HG00140.hp1
HG00408.hp1
others(38): Show 
HG00099.hp2
HG00140.hp1
HG00408.hp1
HG00558.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01099.hp2
HG01109.hp2
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02132.hp2
HG02165.hp2
HG02257.hp2
HG02280.hp2
HG02300.hp1
HG02615.hp1
HG02630.hp2
HG02698.hp2
HG02723.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03710.hp2
NA18989.hp2
NA18990.hp2
NA19000.hp1
NA19065.hp2
NA19070.hp1
NA19089.hp1
NA21309.hp1
 intron_variant MODIFIER c.115+1396_115+1397d
others(4): Show 
c.115+1396_115+1397dupTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253332
chr2:233253332 G
G
 GTTT
GTTT
 32 a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
others(29): Show 
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0005g0012
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0008t0005g0031
a0004c0009t0002g0266
 38 HG00280.hp2
HG00642.hp1
HG00735.hp1
others(35): Show 
HG00280.hp2
HG00642.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01192.hp2
HG01261.hp2
HG01516.hp2
HG02083.hp1
HG02129.hp2
HG02135.hp2
HG02145.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02630.hp1
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG03098.hp2
HG03688.hp1
HG03688.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
NA18939.hp1
NA18947.hp1
NA18950.hp2
NA18951.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18981.hp2
NA18992.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
 intron_variant MODIFIER c.115+1395_115+1397d
others(5): Show 
c.115+1395_115+1397dupTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253332
chr2:233253332 G
G
 GTTTT
GTTTT
 9 a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
others(6): Show 
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0013
a0002c0002t0005g0035
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0282
 12 HG00673.hp1
HG01346.hp2
HG02071.hp2
others(9): Show 
HG00673.hp1
HG01346.hp2
HG02071.hp2
HG02155.hp2
NA18948.hp1
NA18954.hp2
NA18957.hp1
NA18987.hp1
NA19005.hp2
NA19030.hp1
NA19060.hp2
NA19088.hp2
 intron_variant MODIFIER c.115+1394_115+1397d
others(6): Show 
c.115+1394_115+1397dupTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253332
chr2:233253332 G
G
 GTTTTTTT
others(3): Show 
GTTTTTTTTTT
 1 a0002c0002t0010g0283
a0002c0002t0010g0283
 1 HG03209.hp2
HG03209.hp2
 intron_variant MODIFIER c.115+1397_115+1398i
others(12): Show 
c.115+1397_115+1398insTTTTTTTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253332
chr2:233253332 G
G
 T
T
 1 a0002c0002t0018g0189
a0002c0002t0018g0189
 1 HG02809.hp1
HG02809.hp1
 intron_variant MODIFIER c.115+1390G>T
c.115+1390G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253332
chr2:233253332 GTTTTTTT
others(3): Show 
GTTTTTTTGTT
 G
G
 1 a0002c0002t0002g0210
a0002c0002t0002g0210
 1 HG03831.hp2
HG03831.hp2
 intron_variant MODIFIER c.115+1398_115+1407d
others(12): Show 
c.115+1398_115+1407delGTTTTTTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253332
chr2:233253340 G
G
 GT
GT
 41 a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0010
others(38): Show 
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0010
a0001c0001t0001g0017
a0001c0001t0001g0022
a0001c0001t0001g0038
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0136
a0001c0001t0001g0137
a0001c0001t0001g0139
a0001c0001t0003g0011
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0008g0039
a0001c0001t0008g0040
a0001c0001t0009g0133
a0001c0001t0012g0142
a0001c0001t0020g0151
a0001c0001t0021g0144
a0003c0003t0007g0003
a0003c0003t0007g0149
 56 HG00280.hp1
HG00621.hp1
HG00735.hp2
others(53): Show 
HG00280.hp1
HG00621.hp1
HG00735.hp2
HG01070.hp2
HG01358.hp2
HG02074.hp1
HG02083.hp2
HG02132.hp1
HG02145.hp2
HG02155.hp1
HG02300.hp2
HG02622.hp1
HG02683.hp2
HG02717.hp1
HG02818.hp1
HG02896.hp1
HG02970.hp1
HG03130.hp2
HG03516.hp1
HG03704.hp2
HG04199.hp2
NA18522.hp1
NA18612.hp1
NA18906.hp2
NA18939.hp2
NA18940.hp1
NA18946.hp1
NA18948.hp2
NA18950.hp1
NA18956.hp2
NA18974.hp2
NA18977.hp1
NA18977.hp2
NA18981.hp1
NA18982.hp1
NA18989.hp1
NA18991.hp1
NA18991.hp2
NA18992.hp2
NA18994.hp2
NA19000.hp2
NA19001.hp2
NA19011.hp1
NA19012.hp1
NA19012.hp2
NA19030.hp2
NA19058.hp2
NA19060.hp1
NA19063.hp2
NA19077.hp2
NA19086.hp1
NA19087.hp1
NA19088.hp1
NA20129.hp1
NA20300.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.115+1419dupT
c.115+1419dupT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253340
chr2:233253340 G
G
 GTT
GTT
 8 a0001c0001t0001g0018
a0001c0001t0001g0152
a0001c0001t0003g0153
others(5): Show 
a0001c0001t0001g0018
a0001c0001t0001g0152
a0001c0001t0003g0153
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0194
a0001c0001t0007g0156
a0003c0003t0007g0157
 9 HG01081.hp2
HG02965.hp1
HG03669.hp2
others(6): Show 
HG01081.hp2
HG02965.hp1
HG03669.hp2
NA18952.hp2
NA18972.hp2
NA18979.hp1
NA19004.hp2
NA19081.hp1
NA19082.hp2
 intron_variant MODIFIER c.115+1418_115+1419d
others(4): Show 
c.115+1418_115+1419dupTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253340
chr2:233253340 G
G
 GTTT
GTTT
 22 a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0158
others(19): Show 
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0195
a0001c0001t0019g0170
a0005c0006t0003g0162
 24 HG00423.hp2
HG01255.hp2
HG01516.hp1
others(21): Show 
HG00423.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG02258.hp2
HG02559.hp2
HG02809.hp2
HG03017.hp1
HG03704.hp1
NA18947.hp2
NA18952.hp1
NA18966.hp2
NA18968.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19058.hp1
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA20905.hp2
 intron_variant MODIFIER c.115+1417_115+1419d
others(5): Show 
c.115+1417_115+1419dupTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253340
chr2:233253340 G
G
 GTTTT
GTTTT
 15 a0001c0001t0003g0007
a0001c0001t0003g0175
a0001c0001t0003g0176
others(12): Show 
a0001c0001t0003g0007
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 18 HG01168.hp2
HG01978.hp1
HG02080.hp1
others(15): Show 
HG01168.hp2
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG04115.hp1
HG04184.hp1
NA18522.hp2
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA19043.hp2
NA19078.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
 intron_variant MODIFIER c.115+1416_115+1419d
others(6): Show 
c.115+1416_115+1419dupTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253340
chr2:233253340 G
G
 T
T
 101 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(98): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 115 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(112): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.115+1398G>T
c.115+1398G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253340
chr2:233253340 GT
GT
 G
G
 6 a0001c0001t0001g0043
a0001c0001t0003g0045
a0001c0001t0003g0046
others(3): Show 
a0001c0001t0001g0043
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0004g0044
 6 HG02895.hp2
HG02897.hp2
HG02976.hp2
others(3): Show 
HG02895.hp2
HG02897.hp2
HG02976.hp2
HG06807.hp1
NA18906.hp1
NA19089.hp2
 intron_variant MODIFIER c.115+1419delT
c.115+1419delT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253340
chr2:233253343 T
T
 TTG
TTG
 6 a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
others(3): Show 
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
 6 HG00099.hp1
HG00639.hp1
HG01175.hp1
others(3): Show 
HG00099.hp1
HG00639.hp1
HG01175.hp1
HG01496.hp2
HG02258.hp1
HG06807.hp2
 intron_variant MODIFIER c.115+1402_115+1403i
others(4): Show 
c.115+1402_115+1403insGT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233253343
chr2:233253345 T
T
 G
G
 1 a0001c0001t0001g0041
a0001c0001t0001g0041
 1 HG02165.hp1
HG02165.hp1
 intron_variant MODIFIER c.115+1403T>G
c.115+1403T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253345
chr2:233253347 T
T
 TG
TG
 2 a0001c0001t0001g0042
a0001c0001t0011g0014
a0001c0001t0001g0042
a0001c0001t0011g0014
 3 HG02055.hp1
HG02055.hp2
HG03098.hp1
HG02055.hp1
HG02055.hp2
HG03098.hp1
 intron_variant MODIFIER c.115+1405_115+1406i
others(3): Show 
c.115+1405_115+1406insG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253347
chr2:233253404 G
G
 T
T
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.115+1462G>T
c.115+1462G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253404
chr2:233253406 C
C
 G
G
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.115+1464C>G
c.115+1464C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253406
chr2:233253446 A
A
 G
G
 1 a0001c0001t0001g0123
a0001c0001t0001g0123
 1 NA19078.hp2
NA19078.hp2
 intron_variant MODIFIER c.115+1504A>G
c.115+1504A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253446
chr2:233253507 A
A
 G
G
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.115+1565A>G
c.115+1565A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253507
chr2:233253664 T
T
 G
G
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 NA18959.hp2
NA18959.hp2
 intron_variant MODIFIER c.115+1722T>G
c.115+1722T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253664
chr2:233253769 A
A
 G
G
 205 a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
others(202): Show 
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0020g0151
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
a0005c0006t0003g0162
 233 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(230): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00621.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02083.hp2
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp2
NA18979.hp1
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19058.hp1
NA19058.hp2
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.115+1827A>G
c.115+1827A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253769
chr2:233253772 A
A
 G
G
 8 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(5): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0004g0044
 8 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(5): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02976.hp2
HG03540.hp1
HG06807.hp1
NA18906.hp1
 intron_variant MODIFIER c.115+1830A>G
c.115+1830A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233253772
chr2:233254024 A
A
 T
T
 3 a0001c0001t0001g0021
a0001c0001t0001g0022
a0001c0001t0001g0197
a0001c0001t0001g0021
a0001c0001t0001g0022
a0001c0001t0001g0197
 5 HG02622.hp1
HG03041.hp2
HG03139.hp2
others(2): Show 
HG02622.hp1
HG03041.hp2
HG03139.hp2
NA19043.hp1
NA20300.hp2
 intron_variant MODIFIER c.116-2078A>T
c.116-2078A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254024
chr2:233254056 G
G
 A
A
 1 a0001c0001t0003g0091
a0001c0001t0003g0091
 1 HG00738.hp2
HG00738.hp2
 intron_variant MODIFIER c.116-2046G>A
c.116-2046G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254056
chr2:233254094 A
A
 G
G
 1 a0001c0001t0003g0119
a0001c0001t0003g0119
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.116-2008A>G
c.116-2008A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254094
chr2:233254121 CTT
CTT
 C
C
 8 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(5): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0004g0044
 8 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(5): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02976.hp2
HG03540.hp1
HG06807.hp1
NA18906.hp1
 intron_variant MODIFIER c.116-1979_116-1978d
others(4): Show 
c.116-1979_116-1978delTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233254121
chr2:233254137 AT
AT
 A
A
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.116-1964delT
c.116-1964delT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254137
chr2:233254271 C
C
 T
T
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.116-1831C>T
c.116-1831C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254271
chr2:233254285 G
G
 A
A
 1 a0001c0001t0004g0044
a0001c0001t0004g0044
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.116-1817G>A
c.116-1817G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254285
chr2:233254338 A
A
 G
G
 1 a0001c0001t0001g0037
a0001c0001t0001g0037
 1 NA20752.hp2
NA20752.hp2
 intron_variant MODIFIER c.116-1764A>G
c.116-1764A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254338
chr2:233254442 C
C
 T
T
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.116-1660C>T
c.116-1660C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254442
chr2:233254485 G
G
 A
A
 1 a0001c0001t0001g0124
a0001c0001t0001g0124
 1 HG04199.hp2
HG04199.hp2
 intron_variant MODIFIER c.116-1617G>A
c.116-1617G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254485
chr2:233254536 A
A
 G
G
 5 a0001c0001t0003g0174
a0001c0001t0003g0185
a0001c0001t0003g0186
others(2): Show 
a0001c0001t0003g0174
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
 5 HG00423.hp2
HG02080.hp1
HG02135.hp1
others(2): Show 
HG00423.hp2
HG02080.hp1
HG02135.hp1
NA18953.hp1
NA18968.hp2
 intron_variant MODIFIER c.116-1566A>G
c.116-1566A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254536
chr2:233254549 T
T
 C
C
 3 a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0050
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0050
 9 HG00735.hp2
HG01168.hp1
HG01169.hp1
others(6): Show 
HG00735.hp2
HG01168.hp1
HG01169.hp1
HG01192.hp1
HG01943.hp2
HG01981.hp1
HG02155.hp1
NA19086.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.116-1553T>C
c.116-1553T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254549
chr2:233254585 G
G
 C
C
 1 a0002c0002t0016g0284
a0002c0002t0016g0284
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.116-1517G>C
c.116-1517G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254585
chr2:233254608 T
T
 G
G
 1 a0002c0002t0006g0203
a0002c0002t0006g0203
 1 HG02723.hp1
HG02723.hp1
 intron_variant MODIFIER c.116-1494T>G
c.116-1494T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254608
chr2:233254690 G
G
 T
T
 2 a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0010g0217
a0002c0002t0010g0283
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 intron_variant MODIFIER c.116-1412G>T
c.116-1412G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254690
chr2:233254786 C
C
 CT
CT
 4 a0001c0001t0001g0043
a0001c0001t0004g0089
a0001c0001t0004g0090
others(1): Show 
a0001c0001t0001g0043
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0140
 4 NA18959.hp1
NA18974.hp1
NA18989.hp1
others(1): Show 
NA18959.hp1
NA18974.hp1
NA18989.hp1
NA19089.hp2
 intron_variant MODIFIER c.116-1312dupT
c.116-1312dupT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233254786
chr2:233254931 G
G
 A
A
 5 a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
others(2): Show 
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0125
a0001c0001t0001g0126
 5 HG00673.hp2
NA18950.hp1
NA18982.hp2
others(2): Show 
HG00673.hp2
NA18950.hp1
NA18982.hp2
NA19060.hp1
NA19072.hp1
 intron_variant MODIFIER c.116-1171G>A
c.116-1171G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233254931
chr2:233254969 GTTTA
GTTTA
 G
G
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.116-1112_116-1109d
others(6): Show 
c.116-1112_116-1109delTTTA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 INFO_REALIGN_3_PRIME chr2 233254969
chr2:233255037 G
G
 C
C
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.116-1065G>C
c.116-1065G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255037
chr2:233255185 C
C
 G
G
 2 a0002c0002t0002g0027
a0002c0002t0002g0251
a0002c0002t0002g0027
a0002c0002t0002g0251
 3 HG00099.hp2
HG02300.hp1
HG03490.hp1
HG00099.hp2
HG02300.hp1
HG03490.hp1
 intron_variant MODIFIER c.116-917C>G
c.116-917C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255185
chr2:233255334 C
C
 T
T
 1 a0001c0001t0020g0151
a0001c0001t0020g0151
 1 HG02074.hp1
HG02074.hp1
 intron_variant MODIFIER c.116-768C>T
c.116-768C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255334
chr2:233255431 T
T
 C
C
 2 a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0190
a0001c0001t0003g0191
 2 HG02559.hp2
HG02809.hp2
HG02559.hp2
HG02809.hp2
 intron_variant MODIFIER c.116-671T>C
c.116-671T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255431
chr2:233255518 T
T
 A
A
 62 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(59): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0005c0006t0003g0162
 71 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(68): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00738.hp2
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02486.hp2
HG02559.hp2
HG02647.hp1
HG02683.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp1
HG03139.hp1
HG03225.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03704.hp1
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19063.hp2
NA19078.hp1
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp2
 intron_variant MODIFIER c.116-584T>A
c.116-584T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255518
chr2:233255581 T
T
 C
C
 2 a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0010g0217
a0002c0002t0010g0283
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 intron_variant MODIFIER c.116-521T>C
c.116-521T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255581
chr2:233255643 G
G
 C
C
 1 a0002c0002t0016g0284
a0002c0002t0016g0284
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.116-459G>C
c.116-459G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255643
chr2:233255770 C
C
 G
G
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.116-332C>G
c.116-332C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255770
chr2:233255783 C
C
 G
G
 9 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(6): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0004g0044
a0001c0001t0011g0014
 10 HG01109.hp1
HG02055.hp1
HG02647.hp1
others(7): Show 
HG01109.hp1
HG02055.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02976.hp2
HG03098.hp1
HG03540.hp1
HG06807.hp1
NA18906.hp1
 intron_variant MODIFIER c.116-319C>G
c.116-319C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255783
chr2:233255846 G
G
 A
A
 36 a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
others(33): Show 
a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0005c0006t0003g0162
 41 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(38): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02559.hp2
HG02809.hp2
HG02965.hp2
HG03017.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18522.hp2
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
 intron_variant MODIFIER c.116-256G>A
c.116-256G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233255846
chr2:233256037 G
G
 A
A
 8 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(5): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0004g0044
 8 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(5): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02976.hp2
HG03540.hp1
HG06807.hp1
NA18906.hp1
 intron_variant MODIFIER c.116-65G>A
c.116-65G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233256037
chr2:233256046 C
C
 T
T
 1 a0001c0001t0003g0171
a0001c0001t0003g0171
 1 HG02258.hp2
HG02258.hp2
 intron_variant MODIFIER c.116-56C>T
c.116-56C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 1/17 chr2 233256046
chr2:233256208 T
T
 C
C
 1 a0001c0001t0001g0054
a0001c0001t0001g0054
 1 NA18987.hp2
NA18987.hp2
 intron_variant MODIFIER c.209+13T>C
c.209+13T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256208
chr2:233256377 A
A
 G
G
 1 a0001c0001t0004g0118
a0001c0001t0004g0118
 1 HG03239.hp1
HG03239.hp1
 intron_variant MODIFIER c.209+182A>G
c.209+182A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256377
chr2:233256511 A
A
 T
T
 63 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(60): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0005c0006t0003g0162
 72 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(69): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00738.hp2
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02486.hp2
HG02559.hp2
HG02647.hp1
HG02683.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp1
HG03139.hp1
HG03225.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03704.hp1
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19030.hp2
NA19043.hp2
NA19058.hp1
NA19063.hp2
NA19078.hp1
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp2
 intron_variant MODIFIER c.209+316A>T
c.209+316A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256511
chr2:233256719 C
C
 T
T
 7 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(4): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0188
a0001c0001t0003g0198
 10 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(7): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG02683.hp1
HG03710.hp1
NA18940.hp1
NA18968.hp2
NA19063.hp2
 intron_variant MODIFIER c.209+524C>T
c.209+524C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256719
chr2:233256727 C
C
 T
T
 1 a0001c0001t0004g0117
a0001c0001t0004g0117
 1 HG03490.hp2
HG03490.hp2
 intron_variant MODIFIER c.209+532C>T
c.209+532C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256727
chr2:233256749 C
C
 T
T
 1 a0002c0002t0016g0284
a0002c0002t0016g0284
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.209+554C>T
c.209+554C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256749
chr2:233256839 C
C
 T
T
 1 a0002c0002t0002g0250
a0002c0002t0002g0250
 1 HG01175.hp2
HG01175.hp2
 intron_variant MODIFIER c.209+644C>T
c.209+644C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256839
chr2:233256868 G
G
 T
T
 1 a0002c0002t0002g0249
a0002c0002t0002g0249
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.209+673G>T
c.209+673G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256868
chr2:233256961 G
G
 A
A
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.209+766G>A
c.209+766G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233256961
chr2:233257013 T
T
 TTTTTG
TTTTTG
 7 a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
others(4): Show 
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0020g0151
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 10 HG00621.hp1
HG02074.hp1
HG02083.hp2
others(7): Show 
HG00621.hp1
HG02074.hp1
HG02083.hp2
HG02132.hp1
HG03669.hp2
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 intron_variant MODIFIER c.209+849_209+853dup
others(5): Show 
c.209+849_209+853dupTTTTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233257013
chr2:233257013 TTTTTG
TTTTTG
 T
T
 128 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(125): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0171
a0001c0001t0003g0181
a0001c0001t0003g0188
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 149 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(146): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp2
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03490.hp1
HG03491.hp2
HG03540.hp1
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19043.hp2
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19086.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA21309.hp2
 intron_variant MODIFIER c.209+849_209+853del
others(5): Show 
c.209+849_209+853delTTTTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233257013
chr2:233257013 TTTTTGTT
others(3): Show 
TTTTTGTTTTG
 T
T
 36 a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
others(33): Show 
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0005c0006t0003g0162
 38 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(35): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02145.hp1
HG02280.hp2
HG02559.hp2
HG02630.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp1
HG03017.hp1
HG03098.hp2
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19030.hp1
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA20905.hp2
NA21309.hp1
 intron_variant MODIFIER c.209+844_209+853del
others(10): Show 
c.209+844_209+853delTTTTGTTTTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233257013
chr2:233257060 C
C
 T
T
 7 a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0003g0181
others(4): Show 
a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0003g0181
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 10 HG02258.hp2
HG02965.hp2
HG03453.hp2
others(7): Show 
HG02258.hp2
HG02965.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
NA18522.hp2
NA19043.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
 intron_variant MODIFIER c.209+865C>T
c.209+865C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257060
chr2:233257131 G
G
 A
A
 62 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(59): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0005c0006t0003g0162
 71 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(68): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00738.hp2
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02486.hp2
HG02559.hp2
HG02647.hp1
HG02683.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp1
HG03139.hp1
HG03225.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03704.hp1
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19063.hp2
NA19078.hp1
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp2
 intron_variant MODIFIER c.209+936G>A
c.209+936G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257131
chr2:233257154 C
C
 T
T
 3 a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0139
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0139
 5 NA18612.hp1
NA18952.hp2
NA18992.hp2
others(2): Show 
NA18612.hp1
NA18952.hp2
NA18992.hp2
NA19004.hp2
NA19087.hp1
 intron_variant MODIFIER c.209+959C>T
c.209+959C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257154
chr2:233257205 A
A
 G
G
 1 a0001c0001t0003g0180
a0001c0001t0003g0180
 1 HG01978.hp1
HG01978.hp1
 intron_variant MODIFIER c.209+1010A>G
c.209+1010A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257205
chr2:233257223 G
G
 A
A
 7 a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0200
others(4): Show 
a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0222
 8 HG01884.hp2
HG02257.hp2
HG02717.hp2
others(5): Show 
HG01884.hp2
HG02257.hp2
HG02717.hp2
HG02896.hp2
HG03209.hp1
HG03225.hp2
HG03579.hp2
NA19240.hp2
 intron_variant MODIFIER c.209+1028G>A
c.209+1028G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257223
chr2:233257250 T
T
 C
C
 1 a0001c0001t0003g0055
a0001c0001t0003g0055
 1 HG00323.hp1
HG00323.hp1
 intron_variant MODIFIER c.209+1055T>C
c.209+1055T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257250
chr2:233257276 G
G
 A
A
 1 a0002c0002t0002g0223
a0002c0002t0002g0223
 1 HG03471.hp2
HG03471.hp2
 intron_variant MODIFIER c.209+1081G>A
c.209+1081G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257276
chr2:233257361 A
A
 G
G
 28 a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
others(25): Show 
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0005c0006t0003g0162
 30 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(27): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02559.hp2
HG02809.hp2
HG03017.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA20905.hp2
 intron_variant MODIFIER c.209+1166A>G
c.209+1166A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257361
chr2:233257399 T
T
 C
C
 1 a0002c0002t0006g0252
a0002c0002t0006g0252
 1 HG02630.hp2
HG02630.hp2
 intron_variant MODIFIER c.209+1204T>C
c.209+1204T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257399
chr2:233257536 T
T
 C
C
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.209+1341T>C
c.209+1341T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257536
chr2:233257671 T
T
 C
C
 1 a0001c0001t0001g0127
a0001c0001t0001g0127
 1 HG01070.hp2
HG01070.hp2
 intron_variant MODIFIER c.209+1476T>C
c.209+1476T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257671
chr2:233257676 G
G
 A
A
 156 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(153): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 178 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(175): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp2
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp2
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG06807.hp2
NA18522.hp2
NA18939.hp1
NA18940.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19043.hp2
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.209+1481G>A
c.209+1481G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257676
chr2:233257721 T
T
 C
C
 2 a0001c0001t0003g0007
a0001c0001t0003g0181
a0001c0001t0003g0007
a0001c0001t0003g0181
 5 HG03453.hp2
HG03486.hp1
NA18522.hp2
others(2): Show 
HG03453.hp2
HG03486.hp1
NA18522.hp2
NA19240.hp1
NA20300.hp1
 intron_variant MODIFIER c.209+1526T>C
c.209+1526T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257721
chr2:233257778 G
G
 A
A
 1 a0002c0002t0018g0189
a0002c0002t0018g0189
 1 HG02809.hp1
HG02809.hp1
 intron_variant MODIFIER c.209+1583G>A
c.209+1583G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257778
chr2:233257861 C
C
 T
T
 4 a0001c0001t0001g0088
a0001c0001t0004g0086
a0001c0001t0004g0087
others(1): Show 
a0001c0001t0001g0088
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0138
 4 NA18977.hp1
NA18979.hp2
NA18985.hp1
others(1): Show 
NA18977.hp1
NA18979.hp2
NA18985.hp1
NA19056.hp2
 intron_variant MODIFIER c.209+1666C>T
c.209+1666C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257861
chr2:233257862 G
G
 C
C
 1 a0002c0002t0002g0249
a0002c0002t0002g0249
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.209+1667G>C
c.209+1667G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257862
chr2:233257878 G
G
 A
A
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.209+1683G>A
c.209+1683G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257878
chr2:233257989 G
G
 A
A
 1 a0002c0002t0006g0272
a0002c0002t0006g0272
 1 HG02895.hp1
HG02895.hp1
 intron_variant MODIFIER c.209+1794G>A
c.209+1794G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257989
chr2:233257996 C
C
 T
T
 1 a0001c0001t0003g0119
a0001c0001t0003g0119
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.209+1801C>T
c.209+1801C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233257996
chr2:233258001 C
C
 CA
CA
 44 a0001c0001t0001g0043
a0001c0001t0001g0088
a0001c0001t0001g0139
others(41): Show 
a0001c0001t0001g0043
a0001c0001t0001g0088
a0001c0001t0001g0139
a0001c0001t0003g0150
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0021g0144
a0001c0001t0023g0110
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0015g0202
a0002c0002t0016g0284
 44 HG00733.hp2
HG00741.hp1
HG01358.hp1
others(41): Show 
HG00733.hp2
HG00741.hp1
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02615.hp2
HG02630.hp2
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02818.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03486.hp2
HG03490.hp2
HG03491.hp1
HG03516.hp2
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19030.hp1
NA19030.hp2
NA19056.hp2
NA19081.hp1
NA19087.hp1
NA19089.hp2
NA20752.hp1
NA21309.hp1
 intron_variant MODIFIER c.209+1822dupA
c.209+1822dupA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233258001
chr2:233258001 C
C
 CAA
CAA
 7 a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0020g0151
others(4): Show 
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0020g0151
a0002c0002t0018g0189
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 10 HG00621.hp1
HG02074.hp1
HG02083.hp2
others(7): Show 
HG00621.hp1
HG02074.hp1
HG02083.hp2
HG02132.hp1
HG02809.hp1
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 intron_variant MODIFIER c.209+1821_209+1822d
others(4): Show 
c.209+1821_209+1822dupAA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233258001
chr2:233258001 CAAAA
CAAAA
 C
C
 26 a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0160
others(23): Show 
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0005c0006t0003g0162
 28 HG00423.hp2
HG01168.hp2
HG01255.hp2
others(25): Show 
HG00423.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02559.hp2
HG02809.hp2
HG03017.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA19001.hp1
NA19004.hp1
NA19058.hp1
NA19078.hp1
NA19090.hp1
NA20905.hp2
 intron_variant MODIFIER c.209+1819_209+1822d
others(6): Show 
c.209+1819_209+1822delAAAA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233258001
chr2:233258001 CAAAAAA
CAAAAAA
 C
C
 8 a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0003g0181
others(5): Show 
a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0003g0181
a0001c0001t0011g0014
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 12 HG02055.hp1
HG02258.hp2
HG02965.hp2
others(9): Show 
HG02055.hp1
HG02258.hp2
HG02965.hp2
HG03098.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
NA18522.hp2
NA19043.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
 intron_variant MODIFIER c.209+1817_209+1822d
others(8): Show 
c.209+1817_209+1822delAAAAAA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233258001
chr2:233258011 AAAAAAAT
AAAAAAAT
 A
A
 14 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(11): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0198
a0001c0007t0003g0097
 17 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(14): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01891.hp1
HG02486.hp2
HG02683.hp1
HG02818.hp2
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.209+1818_209+1824d
others(9): Show 
c.209+1818_209+1824delAAAAATA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233258011
chr2:233258012 AAAAAAT
AAAAAAT
 A
A
 8 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(5): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0004g0044
 8 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(5): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02976.hp2
HG03540.hp1
HG06807.hp1
NA18906.hp1
 intron_variant MODIFIER c.209+1819_209+1824d
others(8): Show 
c.209+1819_209+1824delAAAATA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233258012
chr2:233258014 A
A
 T
T
 8 a0001c0001t0003g0007
a0001c0001t0003g0153
a0001c0001t0003g0159
others(5): Show 
a0001c0001t0003g0007
a0001c0001t0003g0153
a0001c0001t0003g0159
a0001c0001t0003g0181
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 11 HG01081.hp2
HG02965.hp2
HG03453.hp2
others(8): Show 
HG01081.hp2
HG02965.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
NA18522.hp2
NA19043.hp2
NA19087.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
 intron_variant MODIFIER c.209+1819A>T
c.209+1819A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258014
chr2:233258016 A
A
 T
T
 31 a0001c0001t0003g0007
a0001c0001t0003g0020
a0001c0001t0003g0153
others(28): Show 
a0001c0001t0003g0007
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0159
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0005c0006t0003g0162
 35 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(32): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG02080.hp1
HG02135.hp1
HG02559.hp2
HG02809.hp2
HG02965.hp2
HG03017.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18522.hp2
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18990.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
 intron_variant MODIFIER c.209+1821A>T
c.209+1821A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258016
chr2:233258016 AATATCTA
others(1): Show 
AATATCTAT
 A
A
 95 a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0020g0151
others(92): Show 
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0020g0151
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
 112 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(109): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00621.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02074.hp1
HG02083.hp1
HG02083.hp2
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp2
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18991.hp2
NA18992.hp1
NA19000.hp1
NA19001.hp2
NA19005.hp2
NA19058.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19082.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.209+1848_209+1855d
others(10): Show 
c.209+1848_209+1855delATCTATAT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233258016
chr2:233258017 ATATCTAT
ATATCTAT
 A
A
 3 a0001c0001t0007g0156
a0002c0002t0005g0211
a0002c0004t0002g0204
a0001c0001t0007g0156
a0002c0002t0005g0211
a0002c0004t0002g0204
 3 HG02258.hp1
HG03669.hp2
NA19010.hp2
HG02258.hp1
HG03669.hp2
NA19010.hp2
 intron_variant MODIFIER c.209+1823_209+1829d
others(9): Show 
c.209+1823_209+1829delTATCTAT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258017
chr2:233258017 ATATCTAT
others(2): Show 
ATATCTATAT
 A
A
 3 a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0271
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0271
 3 HG01070.hp1
HG01071.hp1
HG01192.hp2
HG01070.hp1
HG01071.hp1
HG01192.hp2
 intron_variant MODIFIER c.209+1823_209+1831d
others(11): Show 
c.209+1823_209+1831delTATCTATAT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258017
chr2:233258018 T
T
 A
A
 10 a0001c0001t0012g0142
a0002c0002t0005g0212
a0002c0002t0006g0252
others(7): Show 
a0001c0001t0012g0142
a0002c0002t0005g0212
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
 10 HG02145.hp1
HG02145.hp2
HG02280.hp2
others(7): Show 
HG02145.hp1
HG02145.hp2
HG02280.hp2
HG02630.hp2
HG02886.hp2
HG02895.hp1
HG03098.hp2
HG03831.hp1
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.209+1823T>A
c.209+1823T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258018
chr2:233258019 ATCTATAT
others(3): Show 
ATCTATATATC
 A
A
 1 a0002c0002t0005g0212
a0002c0002t0005g0212
 1 HG03831.hp1
HG03831.hp1
 intron_variant MODIFIER c.209+1826_209+1835d
others(12): Show 
c.209+1826_209+1835delCTATATATCT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 INFO_REALIGN_3_PRIME chr2 233258019
chr2:233258021 C
C
 A
A
 59 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(56): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0005c0006t0003g0162
 68 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(65): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00738.hp2
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02486.hp2
HG02559.hp2
HG02647.hp1
HG02683.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp1
HG03139.hp1
HG03225.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03704.hp1
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19063.hp2
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp2
 intron_variant MODIFIER c.209+1826C>A
c.209+1826C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258021
chr2:233258026 T
T
 A
A
 90 a0001c0001t0007g0156
a0002c0002t0002g0023
a0002c0002t0002g0024
others(87): Show 
a0001c0001t0007g0156
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 104 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(101): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.209+1831T>A
c.209+1831T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258026
chr2:233258028 T
T
 A
A
 2 a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0224
a0002c0002t0002g0225
 2 HG01070.hp1
HG01071.hp1
HG01070.hp1
HG01071.hp1
 intron_variant MODIFIER c.209+1833T>A
c.209+1833T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258028
chr2:233258029 C
C
 A
A
 61 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(58): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0005c0006t0003g0162
 70 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(67): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00738.hp2
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02486.hp2
HG02559.hp2
HG02647.hp1
HG02683.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp1
HG03139.hp1
HG03225.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03704.hp1
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19063.hp2
NA19078.hp1
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA21309.hp2
 intron_variant MODIFIER c.209+1834C>A
c.209+1834C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258029
chr2:233258039 A
A
 G
G
 1 a0001c0001t0004g0114
a0001c0001t0004g0114
 1 HG03540.hp2
HG03540.hp2
 intron_variant MODIFIER c.209+1844A>G
c.209+1844A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258039
chr2:233258057 C
C
 G
G
 1 a0002c0002t0015g0202
a0002c0002t0015g0202
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.209+1862C>G
c.209+1862C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258057
chr2:233258107 G
G
 A
A
 2 a0001c0001t0001g0042
a0001c0001t0001g0128
a0001c0001t0001g0042
a0001c0001t0001g0128
 2 HG02055.hp2
NA20129.hp1
HG02055.hp2
NA20129.hp1
 intron_variant MODIFIER c.209+1912G>A
c.209+1912G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258107
chr2:233258118 G
G
 T
T
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.209+1923G>T
c.209+1923G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258118
chr2:233258374 A
A
 G
G
 166 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(163): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 189 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(186): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp2
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03540.hp1
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19043.hp2
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.209+2179A>G
c.209+2179A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258374
chr2:233258588 A
A
 G
G
 91 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(88): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 105 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(102): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.209+2393A>G
c.209+2393A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258588
chr2:233258677 C
C
 T
T
 1 a0001c0001t0008g0113
a0001c0001t0008g0113
 1 HG02647.hp2
HG02647.hp2
 intron_variant MODIFIER c.209+2482C>T
c.209+2482C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258677
chr2:233258706 G
G
 T
T
 1 a0003c0003t0007g0149
a0003c0003t0007g0149
 1 NA18991.hp2
NA18991.hp2
 intron_variant MODIFIER c.209+2511G>T
c.209+2511G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258706
chr2:233258775 C
C
 T
T
 93 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(90): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 107 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(104): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.209+2580C>T
c.209+2580C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258775
chr2:233258802 T
T
 A
A
 1 a0001c0001t0004g0089
a0001c0001t0004g0089
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.209+2607T>A
c.209+2607T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258802
chr2:233258952 A
A
 G
G
 1 a0001c0001t0001g0042
a0001c0001t0001g0042
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.209+2757A>G
c.209+2757A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233258952
chr2:233259123 A
A
 G
G
 3 a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0137
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0137
 3 HG01981.hp2
HG02300.hp2
NA18984.hp1
HG01981.hp2
HG02300.hp2
NA18984.hp1
 intron_variant MODIFIER c.209+2928A>G
c.209+2928A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259123
chr2:233259199 A
A
 G
G
 4 a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
others(1): Show 
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 4 HG02965.hp2
HG03471.hp1
NA19043.hp2
others(1): Show 
HG02965.hp2
HG03471.hp1
NA19043.hp2
NA20129.hp2
 intron_variant MODIFIER c.209+3004A>G
c.209+3004A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259199
chr2:233259235 T
T
 A
A
 93 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(90): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 107 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(104): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.209+3040T>A
c.209+3040T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259235
chr2:233259291 C
C
 G
G
 2 a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0010g0217
a0002c0002t0010g0283
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 intron_variant MODIFIER c.209+3096C>G
c.209+3096C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259291
chr2:233259315 G
G
 A
A
 1 a0001c0001t0022g0056
a0001c0001t0022g0056
 1 NA18985.hp2
NA18985.hp2
 intron_variant MODIFIER c.209+3120G>A
c.209+3120G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259315
chr2:233259396 G
G
 A
A
 35 a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
others(32): Show 
a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0005c0006t0003g0162
 40 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(37): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02559.hp2
HG02809.hp2
HG02965.hp2
HG03017.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18522.hp2
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
 intron_variant MODIFIER c.209+3201G>A
c.209+3201G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259396
chr2:233259420 T
T
 A
A
 2 a0002c0002t0002g0226
a0002c0002t0005g0212
a0002c0002t0002g0226
a0002c0002t0005g0212
 2 HG03654.hp2
HG03831.hp1
HG03654.hp2
HG03831.hp1
 intron_variant MODIFIER c.209+3225T>A
c.209+3225T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259420
chr2:233259528 G
G
 A
A
 1 a0002c0002t0016g0284
a0002c0002t0016g0284
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.209+3333G>A
c.209+3333G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259528
chr2:233259609 G
G
 A
A
 1 a0001c0001t0004g0102
a0001c0001t0004g0102
 1 HG04228.hp2
HG04228.hp2
 intron_variant MODIFIER c.209+3414G>A
c.209+3414G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259609
chr2:233259710 C
C
 T
T
 2 a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0010g0217
a0002c0002t0010g0283
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 intron_variant MODIFIER c.210-3420C>T
c.210-3420C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259710
chr2:233259711 G
G
 T
T
 10 a0001c0001t0001g0008
a0001c0001t0001g0010
a0001c0001t0001g0015
others(7): Show 
a0001c0001t0001g0008
a0001c0001t0001g0010
a0001c0001t0001g0015
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0137
 15 HG01169.hp2
HG01496.hp1
HG01981.hp2
others(12): Show 
HG01169.hp2
HG01496.hp1
HG01981.hp2
HG02300.hp2
NA18612.hp2
NA18954.hp1
NA18963.hp1
NA18977.hp2
NA18984.hp1
NA18986.hp2
NA18994.hp2
NA19000.hp2
NA19005.hp1
NA19011.hp2
NA19065.hp1
 intron_variant MODIFIER c.210-3419G>T
c.210-3419G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259711
chr2:233259959 G
G
 A
A
 1 a0001c0001t0003g0175
a0001c0001t0003g0175
 1 HG01168.hp2
HG01168.hp2
 intron_variant MODIFIER c.210-3171G>A
c.210-3171G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233259959
chr2:233260144 G
G
 A
A
 92 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(89): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 106 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(103): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.210-2986G>A
c.210-2986G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260144
chr2:233260144 G
G
 C
C
 1 a0001c0001t0001g0057
a0001c0001t0001g0057
 1 HG00639.hp2
HG00639.hp2
 intron_variant MODIFIER c.210-2986G>C
c.210-2986G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260144
chr2:233260253 G
G
 A
A
 1 a0002c0002t0002g0276
a0002c0002t0002g0276
 1 HG01346.hp2
HG01346.hp2
 intron_variant MODIFIER c.210-2877G>A
c.210-2877G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260253
chr2:233260273 C
C
 T
T
 1 a0002c0002t0006g0203
a0002c0002t0006g0203
 1 HG02723.hp1
HG02723.hp1
 intron_variant MODIFIER c.210-2857C>T
c.210-2857C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260273
chr2:233260305 C
C
 T
T
 88 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(85): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0005c0006t0003g0162
 97 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(94): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00733.hp2
HG00738.hp2
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02135.hp1
HG02145.hp2
HG02258.hp2
HG02486.hp2
HG02559.hp2
HG02615.hp2
HG02647.hp1
HG02683.hp1
HG02717.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03225.hp1
HG03239.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG04228.hp2
HG06807.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18979.hp1
NA18981.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19030.hp2
NA19043.hp2
NA19058.hp1
NA19063.hp2
NA19078.hp1
NA19081.hp1
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp2
 intron_variant MODIFIER c.210-2825C>T
c.210-2825C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260305
chr2:233260466 A
A
 T
T
 1 a0001c0001t0004g0112
a0001c0001t0004g0112
 1 HG02615.hp2
HG02615.hp2
 intron_variant MODIFIER c.210-2664A>T
c.210-2664A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260466
chr2:233260491 C
C
 T
T
 1 a0002c0002t0005g0248
a0002c0002t0005g0248
 1 HG02165.hp2
HG02165.hp2
 intron_variant MODIFIER c.210-2639C>T
c.210-2639C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260491
chr2:233260649 A
A
 G
G
 1 a0002c0002t0002g0247
a0002c0002t0002g0247
 1 NA18989.hp2
NA18989.hp2
 intron_variant MODIFIER c.210-2481A>G
c.210-2481A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260649
chr2:233260656 C
C
 T
T
 26 a0002c0002t0002g0026
a0002c0002t0002g0033
a0002c0002t0002g0034
others(23): Show 
a0002c0002t0002g0026
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0249
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0212
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0004c0009t0002g0266
 29 HG00099.hp1
HG00639.hp1
HG00741.hp2
others(26): Show 
HG00099.hp1
HG00639.hp1
HG00741.hp2
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01175.hp1
HG01257.hp1
HG01261.hp2
HG01496.hp2
HG01517.hp2
HG02155.hp2
HG02258.hp1
HG02523.hp1
HG02559.hp1
HG02698.hp2
HG02735.hp2
HG03239.hp2
HG03654.hp2
HG03688.hp1
HG03831.hp1
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18954.hp2
NA18983.hp2
NA18992.hp1
NA19081.hp2
NA19089.hp1
 intron_variant MODIFIER c.210-2474C>T
c.210-2474C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260656
chr2:233260705 C
C
 T
T
 1 a0002c0002t0016g0284
a0002c0002t0016g0284
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.210-2425C>T
c.210-2425C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233260705
chr2:233261016 C
C
 T
T
 1 a0001c0001t0001g0079
a0001c0001t0001g0079
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.210-2114C>T
c.210-2114C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261016
chr2:233261120 T
T
 G
G
 1 a0001c0001t0004g0114
a0001c0001t0004g0114
 1 HG03540.hp2
HG03540.hp2
 intron_variant MODIFIER c.210-2010T>G
c.210-2010T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261120
chr2:233261176 C
C
 T
T
 84 a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
others(81): Show 
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 97 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(94): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02723.hp2
HG02735.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
 intron_variant MODIFIER c.210-1954C>T
c.210-1954C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261176
chr2:233261193 G
G
 C
C
 1 a0001c0001t0003g0093
a0001c0001t0003g0093
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.210-1937G>C
c.210-1937G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261193
chr2:233261373 A
A
 C
C
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.210-1757A>C
c.210-1757A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261373
chr2:233261382 C
C
 T
T
 1 a0001c0001t0003g0101
a0001c0001t0003g0101
 1 HG00323.hp2
HG00323.hp2
 intron_variant MODIFIER c.210-1748C>T
c.210-1748C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261382
chr2:233261399 G
G
 A
A
 14 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(11): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0198
a0001c0007t0003g0097
 17 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(14): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01891.hp1
HG02486.hp2
HG02683.hp1
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.210-1731G>A
c.210-1731G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261399
chr2:233261668 G
G
 GT
GT
 106 a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
others(103): Show 
a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 120 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(117): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.210-1462_210-1461i
others(3): Show 
c.210-1462_210-1461insT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261668
chr2:233261670 TGAGAGGA
TGAGAGGA
 T
T
 106 a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
others(103): Show 
a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 120 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(117): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.210-1459_210-1453d
others(9): Show 
c.210-1459_210-1453delGAGAGGA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261670
chr2:233261678 A
A
 C
C
 106 a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
others(103): Show 
a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 120 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(117): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.210-1452A>C
c.210-1452A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261678
chr2:233261680 A
A
 T
T
 106 a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
others(103): Show 
a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 120 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(117): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.210-1450A>T
c.210-1450A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261680
chr2:233261723 T
T
 C
C
 106 a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
others(103): Show 
a0001c0001t0003g0099
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 120 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(117): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.210-1407T>C
c.210-1407T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261723
chr2:233261751 G
G
 A
A
 167 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(164): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 190 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(187): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp2
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03540.hp1
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19043.hp2
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.210-1379G>A
c.210-1379G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261751
chr2:233261790 A
A
 G
G
 2 a0001c0001t0003g0007
a0001c0001t0003g0181
a0001c0001t0003g0007
a0001c0001t0003g0181
 5 HG03453.hp2
HG03486.hp1
NA18522.hp2
others(2): Show 
HG03453.hp2
HG03486.hp1
NA18522.hp2
NA19240.hp1
NA20300.hp1
 intron_variant MODIFIER c.210-1340A>G
c.210-1340A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261790
chr2:233261818 C
C
 T
T
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.210-1312C>T
c.210-1312C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233261818
chr2:233262390 A
A
 G
G
 2 a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0047
a0001c0001t0003g0048
 2 HG02895.hp2
HG02897.hp2
HG02895.hp2
HG02897.hp2
 intron_variant MODIFIER c.210-740A>G
c.210-740A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233262390
chr2:233262767 T
T
 C
C
 2 a0002c0002t0002g0213
a0002c0002t0002g0227
a0002c0002t0002g0213
a0002c0002t0002g0227
 2 HG00642.hp2
HG01978.hp2
HG00642.hp2
HG01978.hp2
 intron_variant MODIFIER c.210-363T>C
c.210-363T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233262767
chr2:233262800 C
C
 G
G
 1 a0001c0001t0003g0171
a0001c0001t0003g0171
 1 HG02258.hp2
HG02258.hp2
 intron_variant MODIFIER c.210-330C>G
c.210-330C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233262800
chr2:233262813 G
G
 A
A
 36 a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
others(33): Show 
a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0005c0006t0003g0162
 41 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(38): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02559.hp2
HG02809.hp2
HG02965.hp2
HG03017.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18522.hp2
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
 intron_variant MODIFIER c.210-317G>A
c.210-317G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233262813
chr2:233262836 A
A
 T
T
 9 a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
others(6): Show 
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0135
a0001c0001t0001g0136
a0001c0001t0001g0152
 9 HG00408.hp2
HG00423.hp1
HG02129.hp1
others(6): Show 
HG00408.hp2
HG00423.hp1
HG02129.hp1
NA18956.hp2
NA18957.hp2
NA18972.hp2
NA18999.hp1
NA19012.hp1
NA19090.hp2
 intron_variant MODIFIER c.210-294A>T
c.210-294A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233262836
chr2:233262997 C
C
 T
T
 1 a0001c0001t0001g0134
a0001c0001t0001g0134
 1 NA19012.hp2
NA19012.hp2
 intron_variant MODIFIER c.210-133C>T
c.210-133C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 2/17 chr2 233262997
chr2:233263248 C
C
 T
T
 1 a0001c0001t0001g0128
a0001c0001t0001g0128
 1 NA20129.hp1
NA20129.hp1
 intron_variant MODIFIER c.315+13C>T
c.315+13C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 3/17 chr2 233263248
chr2:233263322 A
A
 G
G
 2 a0001c0001t0009g0072
a0001c0001t0009g0133
a0001c0001t0009g0072
a0001c0001t0009g0133
 2 HG02896.hp1
HG02897.hp1
HG02896.hp1
HG02897.hp1
 intron_variant MODIFIER c.315+87A>G
c.315+87A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 3/17 chr2 233263322
chr2:233263475 A
A
 T
T
 1 a0001c0001t0003g0122
a0001c0001t0003g0122
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.315+240A>T
c.315+240A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 3/17 chr2 233263475
chr2:233263533 G
G
 A
A
 1 a0001c0001t0003g0176
a0001c0001t0003g0176
 1 HG04184.hp1
HG04184.hp1
 intron_variant MODIFIER c.315+298G>A
c.315+298G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 3/17 chr2 233263533
chr2:233263542 C
C
 G
G
 103 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(100): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 117 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(114): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.315+307C>G
c.315+307C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 3/17 chr2 233263542
chr2:233264151 G
G
 T
T
 1 a0002c0002t0013g0265
a0002c0002t0013g0265
 1 HG02630.hp1
HG02630.hp1
 intron_variant MODIFIER c.389+86G>T
c.389+86G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264151
chr2:233264200 A
A
 G
G
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.389+135A>G
c.389+135A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264200
chr2:233264263 C
C
 G
G
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.389+198C>G
c.389+198C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264263
chr2:233264269 G
G
 C
C
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.389+204G>C
c.389+204G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264269
chr2:233264322 C
C
 A
A
 1 a0001c0001t0003g0171
a0001c0001t0003g0171
 1 HG02258.hp2
HG02258.hp2
 intron_variant MODIFIER c.389+257C>A
c.389+257C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264322
chr2:233264336 C
C
 G
G
 2 a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0008g0103
a0001c0001t0008g0113
 2 HG02647.hp2
HG03516.hp2
HG02647.hp2
HG03516.hp2
 intron_variant MODIFIER c.389+271C>G
c.389+271C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264336
chr2:233264338 G
G
 A
A
 2 a0001c0001t0001g0042
a0001c0001t0001g0128
a0001c0001t0001g0042
a0001c0001t0001g0128
 2 HG02055.hp2
NA20129.hp1
HG02055.hp2
NA20129.hp1
 intron_variant MODIFIER c.389+273G>A
c.389+273G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264338
chr2:233264431 G
G
 A
A
 1 a0002c0002t0014g0255
a0002c0002t0014g0255
 1 HG04184.hp2
HG04184.hp2
 intron_variant MODIFIER c.389+366G>A
c.389+366G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264431
chr2:233264575 G
G
 T
T
 1 a0001c0001t0003g0100
a0001c0001t0003g0100
 1 HG01261.hp1
HG01261.hp1
 intron_variant MODIFIER c.390-317G>T
c.390-317G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264575
chr2:233264624 C
C
 G
G
 167 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(164): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 190 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(187): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp2
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03540.hp1
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.390-268C>G
c.390-268C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264624
chr2:233264857 G
G
 A
A
 103 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(100): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 117 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(114): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.390-35G>A
c.390-35G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 4/17 chr2 233264857
chr2:233265241 G
G
 A
A
 3 a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0021g0144
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0021g0144
 3 HG02717.hp1
HG02818.hp1
HG03130.hp2
HG02717.hp1
HG02818.hp1
HG03130.hp2
 intron_variant MODIFIER c.641+98G>A
c.641+98G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233265241
chr2:233265279 G
G
 A
A
 2 a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0010g0217
a0002c0002t0010g0283
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 intron_variant MODIFIER c.641+136G>A
c.641+136G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233265279
chr2:233265435 A
A
 G
G
 1 a0001c0001t0001g0139
a0001c0001t0001g0139
 1 NA19087.hp1
NA19087.hp1
 intron_variant MODIFIER c.641+292A>G
c.641+292A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233265435
chr2:233265488 G
G
 C
C
 3 a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0021g0144
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0021g0144
 3 HG02717.hp1
HG02818.hp1
HG03130.hp2
HG02717.hp1
HG02818.hp1
HG03130.hp2
 intron_variant MODIFIER c.641+345G>C
c.641+345G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233265488
chr2:233265584 C
C
 T
T
 2 a0001c0001t0008g0039
a0001c0001t0008g0040
a0001c0001t0008g0039
a0001c0001t0008g0040
 2 HG03516.hp1
NA18906.hp2
HG03516.hp1
NA18906.hp2
 intron_variant MODIFIER c.641+441C>T
c.641+441C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233265584
chr2:233265905 G
G
 A
A
 9 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(6): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
 9 HG02145.hp1
HG02280.hp2
HG02630.hp2
others(6): Show 
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.641+762G>A
c.641+762G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233265905
chr2:233265934 C
C
 G
G
 1 a0001c0001t0003g0147
a0001c0001t0003g0147
 1 NA18522.hp1
NA18522.hp1
 intron_variant MODIFIER c.641+791C>G
c.641+791C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233265934
chr2:233266050 C
C
 T
T
 1 a0001c0001t0003g0171
a0001c0001t0003g0171
 1 HG02258.hp2
HG02258.hp2
 intron_variant MODIFIER c.641+907C>T
c.641+907C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266050
chr2:233266072 C
C
 G
G
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.641+929C>G
c.641+929C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266072
chr2:233266139 C
C
 T
T
 2 a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0010g0217
a0002c0002t0010g0283
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 intron_variant MODIFIER c.641+996C>T
c.641+996C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266139
chr2:233266198 G
G
 GGGAGGC
GGGAGGC
 25 a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0094
others(22): Show 
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0094
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0019g0170
a0005c0006t0003g0162
 27 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(24): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19058.hp1
NA19087.hp2
NA19090.hp1
NA20905.hp2
 intron_variant MODIFIER c.641+1082_641+1087d
others(8): Show 
c.641+1082_641+1087dupAGGCGG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 INFO_REALIGN_3_PRIME chr2 233266198
chr2:233266198 GGGAGGC
GGGAGGC
 G
G
 114 a0001c0001t0003g0009
a0001c0001t0003g0045
a0001c0001t0003g0046
others(111): Show 
a0001c0001t0003g0009
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0115
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0147
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0275
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 131 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(128): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03540.hp1
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18906.hp1
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19043.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19086.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA20129.hp2
 intron_variant MODIFIER c.641+1082_641+1087d
others(8): Show 
c.641+1082_641+1087delAGGCGG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 INFO_REALIGN_3_PRIME chr2 233266198
chr2:233266198 GGGAGGCG
others(5): Show 
GGGAGGCGGAGGC
 G
G
 2 a0001c0005t0003g0092
a0002c0002t0016g0284
a0001c0005t0003g0092
a0002c0002t0016g0284
 2 HG01358.hp1
HG02965.hp2
HG01358.hp1
HG02965.hp2
 intron_variant MODIFIER c.641+1076_641+1087d
others(14): Show 
c.641+1076_641+1087delAGGCGGAGGCGG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 INFO_REALIGN_3_PRIME chr2 233266198
chr2:233266217 G
G
 A
A
 1 a0001c0001t0003g0120
a0001c0001t0003g0120
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.641+1074G>A
c.641+1074G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266217
chr2:233266223 G
G
 A
A
 1 a0001c0001t0003g0190
a0001c0001t0003g0190
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.641+1080G>A
c.641+1080G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266223
chr2:233266474 G
G
 A
A
 1 a0001c0001t0001g0058
a0001c0001t0001g0058
 1 NA18999.hp2
NA18999.hp2
 intron_variant MODIFIER c.641+1331G>A
c.641+1331G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266474
chr2:233266584 C
C
 T
T
 8 a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
others(5): Show 
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
 8 HG02145.hp1
HG02280.hp2
HG02630.hp2
others(5): Show 
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.641+1441C>T
c.641+1441C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266584
chr2:233266670 G
G
 A
A
 1 a0001c0001t0003g0171
a0001c0001t0003g0171
 1 HG02258.hp2
HG02258.hp2
 intron_variant MODIFIER c.641+1527G>A
c.641+1527G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266670
chr2:233266837 A
A
 G
G
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 NA18959.hp2
NA18959.hp2
 intron_variant MODIFIER c.641+1694A>G
c.641+1694A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266837
chr2:233266883 A
A
 C
C
 1 a0002c0002t0002g0243
a0002c0002t0002g0243
 1 HG02132.hp2
HG02132.hp2
 intron_variant MODIFIER c.641+1740A>C
c.641+1740A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266883
chr2:233266896 C
C
 T
T
 1 a0001c0001t0001g0134
a0001c0001t0001g0134
 1 NA19012.hp2
NA19012.hp2
 intron_variant MODIFIER c.641+1753C>T
c.641+1753C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233266896
chr2:233267060 G
G
 T
T
 94 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(91): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 108 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(105): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.641+1917G>T
c.641+1917G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233267060
chr2:233267070 C
C
 T
T
 1 a0001c0001t0001g0071
a0001c0001t0001g0071
 1 NA19063.hp1
NA19063.hp1
 intron_variant MODIFIER c.641+1927C>T
c.641+1927C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233267070
chr2:233267083 C
C
 T
T
 1 a0002c0004t0002g0209
a0002c0004t0002g0209
 1 HG01496.hp2
HG01496.hp2
 intron_variant MODIFIER c.641+1940C>T
c.641+1940C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233267083
chr2:233267237 T
T
 C
C
 6 a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
others(3): Show 
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 9 HG00621.hp1
HG02083.hp2
HG02132.hp1
others(6): Show 
HG00621.hp1
HG02083.hp2
HG02132.hp1
HG03669.hp2
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 intron_variant MODIFIER c.641+2094T>C
c.641+2094T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233267237
chr2:233267327 C
C
 T
T
 1 a0002c0002t0002g0270
a0002c0002t0002g0270
 1 HG01261.hp2
HG01261.hp2
 intron_variant MODIFIER c.641+2184C>T
c.641+2184C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233267327
chr2:233267343 T
T
 C
C
 16 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(13): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0188
a0001c0001t0003g0198
a0001c0007t0003g0097
 19 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(16): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01891.hp1
HG02486.hp2
HG02683.hp1
HG02818.hp2
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA18968.hp2
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.641+2200T>C
c.641+2200T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233267343
chr2:233267462 T
T
 TA
TA
 105 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(102): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 119 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(116): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.641+2326dupA
c.641+2326dupA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 INFO_REALIGN_3_PRIME chr2 233267462
chr2:233267814 A
A
 AC
AC
 9 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(6): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
a0001c0001t0011g0014
 10 HG01109.hp1
HG02055.hp1
HG02647.hp1
others(7): Show 
HG01109.hp1
HG02055.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG03098.hp1
HG03540.hp1
HG06807.hp1
NA18906.hp1
NA19030.hp2
 intron_variant MODIFIER c.642-2187dupC
c.642-2187dupC
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 INFO_REALIGN_3_PRIME chr2 233267814
chr2:233267963 C
C
 T
T
 103 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(100): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 116 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(113): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01099.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.642-2039C>T
c.642-2039C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233267963
chr2:233268811 C
C
 T
T
 3 a0001c0001t0003g0009
a0001c0001t0003g0115
a0001c0001t0003g0147
a0001c0001t0003g0009
a0001c0001t0003g0115
a0001c0001t0003g0147
 5 HG02922.hp1
HG02976.hp1
HG03130.hp1
others(2): Show 
HG02922.hp1
HG02976.hp1
HG03130.hp1
HG03453.hp1
NA18522.hp1
 intron_variant MODIFIER c.642-1191C>T
c.642-1191C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233268811
chr2:233268851 T
T
 A
A
 1 a0001c0001t0004g0086
a0001c0001t0004g0086
 1 NA18985.hp1
NA18985.hp1
 intron_variant MODIFIER c.642-1151T>A
c.642-1151T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233268851
chr2:233268964 T
T
 C
C
 1 a0001c0001t0003g0161
a0001c0001t0003g0161
 1 NA18990.hp1
NA18990.hp1
 intron_variant MODIFIER c.642-1038T>C
c.642-1038T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233268964
chr2:233269110 C
C
 T
T
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.642-892C>T
c.642-892C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269110
chr2:233269140 T
T
 C
C
 2 a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0010g0217
a0002c0002t0010g0283
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 intron_variant MODIFIER c.642-862T>C
c.642-862T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269140
chr2:233269356 G
G
 T
T
 2 a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0008g0103
a0001c0001t0008g0113
 2 HG02647.hp2
HG03516.hp2
HG02647.hp2
HG03516.hp2
 intron_variant MODIFIER c.642-646G>T
c.642-646G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269356
chr2:233269393 C
C
 T
T
 2 a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0263
a0002c0002t0002g0264
 2 HG02083.hp1
NA18969.hp1
HG02083.hp1
NA18969.hp1
 intron_variant MODIFIER c.642-609C>T
c.642-609C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269393
chr2:233269399 C
C
 G
G
 2 a0002c0002t0002g0213
a0002c0002t0002g0227
a0002c0002t0002g0213
a0002c0002t0002g0227
 2 HG00642.hp2
HG01978.hp2
HG00642.hp2
HG01978.hp2
 intron_variant MODIFIER c.642-603C>G
c.642-603C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269399
chr2:233269410 T
T
 A
A
 1 a0001c0001t0001g0059
a0001c0001t0001g0059
 1 HG02071.hp1
HG02071.hp1
 intron_variant MODIFIER c.642-592T>A
c.642-592T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269410
chr2:233269689 G
G
 A
A
 3 a0001c0001t0003g0009
a0001c0001t0003g0115
a0001c0001t0003g0147
a0001c0001t0003g0009
a0001c0001t0003g0115
a0001c0001t0003g0147
 5 HG02922.hp1
HG02976.hp1
HG03130.hp1
others(2): Show 
HG02922.hp1
HG02976.hp1
HG03130.hp1
HG03453.hp1
NA18522.hp1
 intron_variant MODIFIER c.642-313G>A
c.642-313G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269689
chr2:233269794 T
T
 A
A
 1 a0005c0006t0003g0162
a0005c0006t0003g0162
 1 NA19001.hp1
NA19001.hp1
 intron_variant MODIFIER c.642-208T>A
c.642-208T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269794
chr2:233269807 C
C
 T
T
 94 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(91): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 108 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(105): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.642-195C>T
c.642-195C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269807
chr2:233269868 T
T
 A
A
 1 a0005c0006t0003g0162
a0005c0006t0003g0162
 1 NA19001.hp1
NA19001.hp1
 intron_variant MODIFIER c.642-134T>A
c.642-134T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269868
chr2:233269869 A
A
 T
T
 1 a0005c0006t0003g0162
a0005c0006t0003g0162
 1 NA19001.hp1
NA19001.hp1
 intron_variant MODIFIER c.642-133A>T
c.642-133A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269869
chr2:233269907 T
T
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG02145.hp2
HG02145.hp2
 intron_variant MODIFIER c.642-95T>C
c.642-95T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269907
chr2:233269914 T
T
 C
C
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.642-88T>C
c.642-88T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269914
chr2:233269947 C
C
 T
T
 1 a0002c0002t0002g0242
a0002c0002t0002g0242
 1 HG01891.hp2
HG01891.hp2
 intron_variant MODIFIER c.642-55C>T
c.642-55C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 chr2 233269947
chr2:233269978 CT
CT
 C
C
 65 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(62): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
a0005c0006t0003g0162
 73 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(70): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00738.hp2
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01358.hp1
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp2
HG02280.hp2
HG02559.hp2
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02723.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp2
HG03139.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03704.hp1
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG06807.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19030.hp1
NA19043.hp2
NA19058.hp1
NA19063.hp2
NA19078.hp1
NA19086.hp2
NA19087.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.642-9delT
c.642-9delT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 5/17 INFO_REALIGN_3_PRIME chr2 233269978
chr2:233270135 A
A
 AT
AT
 28 a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0048
others(25): Show 
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0048
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0019g0170
a0005c0006t0003g0162
 30 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(27): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02897.hp2
HG03017.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA20905.hp2
 intron_variant MODIFIER c.707+79dupT
c.707+79dupT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 INFO_REALIGN_3_PRIME chr2 233270135
chr2:233270152 G
G
 T
T
 2 a0001c0001t0007g0156
a0002c0002t0002g0281
a0001c0001t0007g0156
a0002c0002t0002g0281
 2 HG03669.hp2
NA18954.hp2
HG03669.hp2
NA18954.hp2
 intron_variant MODIFIER c.707+85G>T
c.707+85G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270152
chr2:233270175 C
C
 T
T
 1 a0002c0002t0015g0202
a0002c0002t0015g0202
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.707+108C>T
c.707+108C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270175
chr2:233270293 C
C
 T
T
 10 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(7): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
 11 HG01109.hp1
HG02055.hp1
HG02647.hp1
others(8): Show 
HG01109.hp1
HG02055.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG03098.hp1
HG03540.hp1
HG06807.hp1
NA18906.hp1
NA19086.hp2
 intron_variant MODIFIER c.707+226C>T
c.707+226C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270293
chr2:233270322 C
C
 T
T
 6 a0001c0001t0003g0007
a0001c0001t0003g0181
a0001c0005t0003g0092
others(3): Show 
a0001c0001t0003g0007
a0001c0001t0003g0181
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 9 HG02965.hp2
HG03453.hp2
HG03471.hp1
others(6): Show 
HG02965.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
NA18522.hp2
NA19043.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
 intron_variant MODIFIER c.707+255C>T
c.707+255C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270322
chr2:233270382 C
C
 T
T
 10 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(7): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
 11 HG01109.hp1
HG02055.hp1
HG02647.hp1
others(8): Show 
HG01109.hp1
HG02055.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG03098.hp1
HG03540.hp1
HG06807.hp1
NA18906.hp1
NA19086.hp2
 intron_variant MODIFIER c.707+315C>T
c.707+315C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270382
chr2:233270398 T
T
 G
G
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 NA19011.hp2
NA19011.hp2
 intron_variant MODIFIER c.707+331T>G
c.707+331T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270398
chr2:233270474 C
C
 T
T
 1 a0005c0006t0003g0162
a0005c0006t0003g0162
 1 NA19001.hp1
NA19001.hp1
 intron_variant MODIFIER c.707+407C>T
c.707+407C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270474
chr2:233270538 G
G
 C
C
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.707+471G>C
c.707+471G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270538
chr2:233270813 G
G
 A
A
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.707+746G>A
c.707+746G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270813
chr2:233270828 C
C
 T
T
 1 a0001c0001t0004g0111
a0001c0001t0004g0111
 1 HG03195.hp1
HG03195.hp1
 intron_variant MODIFIER c.707+761C>T
c.707+761C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233270828
chr2:233271044 C
C
 T
T
 92 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(89): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 106 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(103): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.707+977C>T
c.707+977C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233271044
chr2:233271511 C
C
 G
G
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.707+1444C>G
c.707+1444C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233271511
chr2:233271525 G
G
 A
A
 1 a0004c0009t0002g0266
a0004c0009t0002g0266
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.708-1441G>A
c.708-1441G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233271525
chr2:233271632 A
A
 G
G
 1 a0002c0002t0015g0202
a0002c0002t0015g0202
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.708-1334A>G
c.708-1334A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233271632
chr2:233271748 G
G
 A
A
 1 a0001c0001t0019g0170
a0001c0001t0019g0170
 1 NA20905.hp2
NA20905.hp2
 intron_variant MODIFIER c.708-1218G>A
c.708-1218G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233271748
chr2:233271764 A
A
 G
G
 94 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(91): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 108 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(105): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.708-1202A>G
c.708-1202A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233271764
chr2:233271889 C
C
 T
T
 8 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(5): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0011g0014
 9 HG01109.hp1
HG02055.hp1
HG02647.hp1
others(6): Show 
HG01109.hp1
HG02055.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG03098.hp1
HG03540.hp1
HG06807.hp1
NA18906.hp1
 intron_variant MODIFIER c.708-1077C>T
c.708-1077C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233271889
chr2:233271992 A
A
 T
T
 200 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(197): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0020g0151
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
a0005c0006t0003g0162
 226 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(223): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00621.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02083.hp2
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp2
NA18979.hp1
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19058.hp1
NA19058.hp2
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.708-974A>T
c.708-974A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233271992
chr2:233272263 C
C
 T
T
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.708-703C>T
c.708-703C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272263
chr2:233272264 G
G
 A
A
 1 a0001c0001t0004g0089
a0001c0001t0004g0089
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.708-702G>A
c.708-702G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272264
chr2:233272333 C
C
 T
T
 37 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(34): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
a0001c0001t0004g0044
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
 38 HG00733.hp2
HG00741.hp1
HG01109.hp1
others(35): Show 
HG00733.hp2
HG00741.hp1
HG01109.hp1
HG02055.hp1
HG02145.hp2
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02818.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02976.hp2
HG03098.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
HG06807.hp1
NA18906.hp1
NA18944.hp1
NA18946.hp1
NA18966.hp2
NA18968.hp1
NA18979.hp1
NA18981.hp1
NA19030.hp2
NA19081.hp1
NA19086.hp2
NA20752.hp1
 intron_variant MODIFIER c.708-633C>T
c.708-633C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272333
chr2:233272551 A
A
 C
C
 2 a0002c0004t0002g0204
a0002c0004t0002g0208
a0002c0004t0002g0204
a0002c0004t0002g0208
 2 HG00099.hp1
HG02258.hp1
HG00099.hp1
HG02258.hp1
 intron_variant MODIFIER c.708-415A>C
c.708-415A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272551
chr2:233272588 G
G
 A
A
 1 a0001c0001t0001g0128
a0001c0001t0001g0128
 1 NA20129.hp1
NA20129.hp1
 intron_variant MODIFIER c.708-378G>A
c.708-378G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272588
chr2:233272624 G
G
 A
A
 1 a0001c0001t0001g0129
a0001c0001t0001g0129
 1 NA19077.hp2
NA19077.hp2
 intron_variant MODIFIER c.708-342G>A
c.708-342G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272624
chr2:233272800 G
G
 T
T
 1 a0001c0001t0007g0148
a0001c0001t0007g0148
 1 HG02083.hp2
HG02083.hp2
 intron_variant MODIFIER c.708-166G>T
c.708-166G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272800
chr2:233272905 G
G
 T
T
 1 a0001c0001t0001g0126
a0001c0001t0001g0126
 1 NA19060.hp1
NA19060.hp1
 intron_variant MODIFIER c.708-61G>T
c.708-61G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272905
chr2:233272910 C
C
 A
A
 37 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(34): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
a0001c0001t0004g0044
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
 38 HG00733.hp2
HG00741.hp1
HG01109.hp1
others(35): Show 
HG00733.hp2
HG00741.hp1
HG01109.hp1
HG02055.hp1
HG02145.hp2
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02818.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02976.hp2
HG03098.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
HG06807.hp1
NA18906.hp1
NA18944.hp1
NA18946.hp1
NA18966.hp2
NA18968.hp1
NA18979.hp1
NA18981.hp1
NA19030.hp2
NA19081.hp1
NA19086.hp2
NA20752.hp1
 intron_variant MODIFIER c.708-56C>A
c.708-56C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272910
chr2:233272947 G
G
 C
C
 193 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(190): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 216 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(213): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18979.hp1
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.708-19G>C
c.708-19G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 6/17 chr2 233272947
chr2:233273120 A
A
 G
G
 1 a0001c0001t0001g0070
a0001c0001t0001g0070
 1 NA18940.hp2
NA18940.hp2
 intron_variant MODIFIER c.794+68A>G
c.794+68A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 7/17 chr2 233273120
chr2:233273124 C
C
 G
G
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.794+72C>G
c.794+72C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 7/17 chr2 233273124
chr2:233273197 G
G
 A
A
 1 a0001c0001t0001g0128
a0001c0001t0001g0128
 1 NA20129.hp1
NA20129.hp1
 intron_variant MODIFIER c.794+145G>A
c.794+145G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 7/17 chr2 233273197
chr2:233273202 C
C
 T
T
 105 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(102): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 119 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(116): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.794+150C>T
c.794+150C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 7/17 chr2 233273202
chr2:233273379 C
C
 T
T
 15 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(12): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0198
a0001c0007t0003g0097
 18 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(15): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01891.hp1
HG02486.hp2
HG02683.hp1
HG02818.hp2
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.794+327C>T
c.794+327C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 7/17 chr2 233273379
chr2:233273397 A
A
 G
G
 1 a0002c0002t0005g0241
a0002c0002t0005g0241
 1 NA19000.hp1
NA19000.hp1
 intron_variant MODIFIER c.795-324A>G
c.795-324A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 7/17 chr2 233273397
chr2:233273432 G
G
 C
C
 2 a0001c0001t0008g0039
a0001c0001t0008g0040
a0001c0001t0008g0039
a0001c0001t0008g0040
 2 HG03516.hp1
NA18906.hp2
HG03516.hp1
NA18906.hp2
 intron_variant MODIFIER c.795-289G>C
c.795-289G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 7/17 chr2 233273432
chr2:233273594 C
C
 T
T
 105 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(102): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 119 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(116): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.795-127C>T
c.795-127C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 7/17 chr2 233273594
chr2:233273818 T
T
 TA
TA
 9 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(6): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
a0001c0001t0004g0044
 9 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(6): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02976.hp2
HG03540.hp1
HG06807.hp1
NA18906.hp1
NA19030.hp2
 intron_variant MODIFIER c.851+42dupA
c.851+42dupA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 8/17 INFO_REALIGN_3_PRIME chr2 233273818
chr2:233273972 C
C
 A
A
 1 a0002c0002t0006g0203
a0002c0002t0006g0203
 1 HG02723.hp1
HG02723.hp1
 intron_variant MODIFIER c.851+195C>A
c.851+195C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 8/17 chr2 233273972
chr2:233274083 G
G
 A
A
 6 a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
others(3): Show 
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 9 HG00621.hp1
HG02083.hp2
HG02132.hp1
others(6): Show 
HG00621.hp1
HG02083.hp2
HG02132.hp1
HG03669.hp2
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 intron_variant MODIFIER c.851+306G>A
c.851+306G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 8/17 chr2 233274083
chr2:233274215 G
G
 C
C
 1 a0002c0002t0016g0284
a0002c0002t0016g0284
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.851+438G>C
c.851+438G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 8/17 chr2 233274215
chr2:233274219 A
A
 G
G
 1 a0001c0001t0004g0192
a0001c0001t0004g0192
 1 HG03704.hp2
HG03704.hp2
 intron_variant MODIFIER c.851+442A>G
c.851+442A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 8/17 chr2 233274219
chr2:233274317 T
T
 C
C
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.852-359T>C
c.852-359T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 8/17 chr2 233274317
chr2:233274793 G
G
 A
A
 1 a0001c0001t0009g0060
a0001c0001t0009g0060
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.954+15G>A
c.954+15G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233274793
chr2:233274822 G
G
 A
A
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.954+44G>A
c.954+44G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233274822
chr2:233274843 G
G
 C
C
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.954+65G>C
c.954+65G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233274843
chr2:233274846 C
C
 T
T
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.954+68C>T
c.954+68C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233274846
chr2:233274911 T
T
 A
A
 1 a0001c0001t0001g0081
a0001c0001t0001g0081
 1 NA18612.hp2
NA18612.hp2
 intron_variant MODIFIER c.954+133T>A
c.954+133T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233274911
chr2:233275023 A
A
 G
G
 1 a0001c0001t0008g0103
a0001c0001t0008g0103
 1 HG03516.hp2
HG03516.hp2
 intron_variant MODIFIER c.954+245A>G
c.954+245A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275023
chr2:233275072 T
T
 C
C
 105 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(102): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 119 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(116): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.954+294T>C
c.954+294T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275072
chr2:233275092 A
A
 G
G
 26 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(23): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0188
a0001c0001t0003g0198
a0001c0007t0003g0097
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 29 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(26): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01358.hp1
HG01891.hp1
HG02145.hp1
HG02280.hp2
HG02486.hp2
HG02630.hp2
HG02683.hp1
HG02723.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02970.hp1
HG03098.hp2
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA18968.hp2
NA19030.hp1
NA19063.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.954+314A>G
c.954+314A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275092
chr2:233275176 C
C
 T
T
 1 a0001c0001t0003g0098
a0001c0001t0003g0098
 1 HG02486.hp2
HG02486.hp2
 intron_variant MODIFIER c.954+398C>T
c.954+398C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275176
chr2:233275319 G
G
 A
A
 11 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(8): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0015g0202
a0002c0002t0016g0284
 11 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(8): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
HG03486.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.954+541G>A
c.954+541G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275319
chr2:233275520 G
G
 T
T
 1 a0001c0001t0023g0110
a0001c0001t0023g0110
 1 HG03491.hp1
HG03491.hp1
 intron_variant MODIFIER c.954+742G>T
c.954+742G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275520
chr2:233275634 G
G
 A
A
 1 a0002c0002t0015g0202
a0002c0002t0015g0202
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.954+856G>A
c.954+856G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275634
chr2:233275771 G
G
 A
A
 93 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(90): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 107 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(104): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.954+993G>A
c.954+993G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275771
chr2:233275818 G
G
 C
C
 5 a0002c0002t0002g0024
a0002c0002t0002g0220
a0002c0002t0002g0221
others(2): Show 
a0002c0002t0002g0024
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0223
a0002c0002t0002g0229
 6 HG02615.hp1
HG02622.hp2
HG02970.hp2
others(3): Show 
HG02615.hp1
HG02622.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03471.hp2
 intron_variant MODIFIER c.954+1040G>C
c.954+1040G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233275818
chr2:233276072 A
A
 G
G
 1 a0001c0001t0019g0170
a0001c0001t0019g0170
 1 NA20905.hp2
NA20905.hp2
 intron_variant MODIFIER c.954+1294A>G
c.954+1294A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233276072
chr2:233276306 T
T
 C
C
 105 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(102): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 119 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(116): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.955-1262T>C
c.955-1262T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233276306
chr2:233276621 C
C
 T
T
 104 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(101): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 118 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(115): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.955-947C>T
c.955-947C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233276621
chr2:233276673 C
C
 T
T
 6 a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
others(3): Show 
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 9 HG00621.hp1
HG02083.hp2
HG02132.hp1
others(6): Show 
HG00621.hp1
HG02083.hp2
HG02132.hp1
HG03669.hp2
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 intron_variant MODIFIER c.955-895C>T
c.955-895C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233276673
chr2:233276674 G
G
 A
A
 2 a0001c0001t0008g0039
a0001c0001t0008g0040
a0001c0001t0008g0039
a0001c0001t0008g0040
 2 HG03516.hp1
NA18906.hp2
HG03516.hp1
NA18906.hp2
 intron_variant MODIFIER c.955-894G>A
c.955-894G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233276674
chr2:233276712 T
T
 C
C
 23 a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
others(20): Show 
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
 23 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(20): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18966.hp2
NA18968.hp1
NA18979.hp1
NA18981.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.955-856T>C
c.955-856T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233276712
chr2:233276827 CT
CT
 C
C
 25 a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
others(22): Show 
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
 25 HG00733.hp2
HG00741.hp1
HG02145.hp2
others(22): Show 
HG00733.hp2
HG00741.hp1
HG02145.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18966.hp2
NA18968.hp1
NA18979.hp1
NA18981.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.955-737delT
c.955-737delT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 INFO_REALIGN_3_PRIME chr2 233276827
chr2:233276875 T
T
 C
C
 1 a0001c0001t0001g0058
a0001c0001t0001g0058
 1 NA18999.hp2
NA18999.hp2
 intron_variant MODIFIER c.955-693T>C
c.955-693T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233276875
chr2:233276893 C
C
 T
T
 25 a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
others(22): Show 
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
 25 HG00733.hp2
HG00741.hp1
HG02145.hp2
others(22): Show 
HG00733.hp2
HG00741.hp1
HG02145.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18966.hp2
NA18968.hp1
NA18979.hp1
NA18981.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.955-675C>T
c.955-675C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233276893
chr2:233277047 A
A
 C
C
 1 a0001c0001t0003g0180
a0001c0001t0003g0180
 1 HG01978.hp1
HG01978.hp1
 intron_variant MODIFIER c.955-521A>C
c.955-521A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277047
chr2:233277113 G
G
 A
A
 35 a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
others(32): Show 
a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0005c0006t0003g0162
 40 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(37): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02559.hp2
HG02809.hp2
HG02965.hp2
HG03017.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18522.hp2
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
 intron_variant MODIFIER c.955-455G>A
c.955-455G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277113
chr2:233277135 G
G
 A
A
 1 a0001c0001t0003g0181
a0001c0001t0003g0181
 1 NA20300.hp1
NA20300.hp1
 intron_variant MODIFIER c.955-433G>A
c.955-433G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277135
chr2:233277180 T
T
 G
G
 34 a0001c0001t0003g0150
a0001c0001t0004g0044
a0001c0001t0004g0061
others(31): Show 
a0001c0001t0003g0150
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
 34 HG00733.hp2
HG00741.hp1
HG02145.hp2
others(31): Show 
HG00733.hp2
HG00741.hp1
HG02145.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19030.hp2
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.955-388T>G
c.955-388T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277180
chr2:233277353 G
G
 A
A
 105 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(102): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 119 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(116): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03098.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA21309.hp1
 intron_variant MODIFIER c.955-215G>A
c.955-215G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277353
chr2:233277382 C
C
 T
T
 1 a0001c0001t0004g0194
a0001c0001t0004g0194
 1 HG02965.hp1
HG02965.hp1
 intron_variant MODIFIER c.955-186C>T
c.955-186C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277382
chr2:233277427 G
G
 A
A
 1 a0002c0002t0015g0202
a0002c0002t0015g0202
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.955-141G>A
c.955-141G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277427
chr2:233277523 T
T
 G
G
 1 a0001c0001t0004g0192
a0001c0001t0004g0192
 1 HG03704.hp2
HG03704.hp2
 intron_variant MODIFIER c.955-45T>G
c.955-45T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277523
chr2:233277540 G
G
 C
C
 1 a0001c0005t0003g0182
a0001c0005t0003g0182
 1 HG03471.hp1
HG03471.hp1
 intron_variant MODIFIER c.955-28G>C
c.955-28G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 9/17 chr2 233277540
chr2:233277707 C
C
 T
T
 1 a0001c0001t0003g0176
a0001c0001t0003g0176
 1 HG04184.hp1
HG04184.hp1
 intron_variant MODIFIER c.1060+34C>T
c.1060+34C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233277707
chr2:233277832 A
A
 G
G
 9 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(6): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
 9 HG02145.hp1
HG02280.hp2
HG02630.hp2
others(6): Show 
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.1060+159A>G
c.1060+159A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233277832
chr2:233277843 A
A
 G
G
 202 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(199): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0020g0151
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
a0005c0006t0003g0162
 228 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(225): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00621.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02083.hp2
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp2
NA18979.hp1
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19058.hp1
NA19058.hp2
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1060+170A>G
c.1060+170A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233277843
chr2:233277924 T
T
 C
C
 1 a0001c0005t0003g0183
a0001c0005t0003g0183
 1 NA20129.hp2
NA20129.hp2
 intron_variant MODIFIER c.1060+251T>C
c.1060+251T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233277924
chr2:233278044 A
A
 G
G
 1 a0001c0001t0003g0120
a0001c0001t0003g0120
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.1060+371A>G
c.1060+371A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233278044
chr2:233278056 A
A
 G
G
 2 a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0069
a0001c0001t0001g0071
 2 NA18984.hp2
NA19063.hp1
NA18984.hp2
NA19063.hp1
 intron_variant MODIFIER c.1060+383A>G
c.1060+383A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233278056
chr2:233278067 G
G
 A
A
 2 a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0224
a0002c0002t0002g0225
 2 HG01070.hp1
HG01071.hp1
HG01070.hp1
HG01071.hp1
 intron_variant MODIFIER c.1060+394G>A
c.1060+394G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233278067
chr2:233278088 T
T
 G
G
 200 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(197): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 223 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(220): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1060+415T>G
c.1060+415T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233278088
chr2:233278297 C
C
 T
T
 1 a0002c0002t0015g0202
a0002c0002t0015g0202
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.1060+624C>T
c.1060+624C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233278297
chr2:233278484 C
C
 G
G
 1 a0002c0002t0005g0240
a0002c0002t0005g0240
 1 NA19070.hp1
NA19070.hp1
 intron_variant MODIFIER c.1060+811C>G
c.1060+811C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233278484
chr2:233278563 G
G
 A
A
 9 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(6): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
 9 HG02145.hp1
HG02280.hp2
HG02630.hp2
others(6): Show 
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.1060+890G>A
c.1060+890G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233278563
chr2:233279120 G
G
 A
A
 1 a0001c0001t0001g0073
a0001c0001t0001g0073
 1 NA18957.hp2
NA18957.hp2
 intron_variant MODIFIER c.1060+1447G>A
c.1060+1447G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279120
chr2:233279353 C
C
 G
G
 1 a0002c0002t0002g0201
a0002c0002t0002g0201
 1 HG03225.hp2
HG03225.hp2
 intron_variant MODIFIER c.1060+1680C>G
c.1060+1680C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279353
chr2:233279369 A
A
 AG
AG
 203 a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
others(200): Show 
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 228 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(225): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1060+1697dupG
c.1060+1697dupG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 INFO_REALIGN_3_PRIME chr2 233279369
chr2:233279460 A
A
 AGATTAGG
others(15): Show 
AGATTAGGTAGAAACTTGATTTT
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1645_1061-164
others(26): Show 
c.1061-1645_1061-1644insGATTAGGTAGAAACTTGATTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279460
chr2:233279462 A
A
 T
T
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1643A>T
c.1061-1643A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279462
chr2:233279465 G
G
 A
A
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1640G>A
c.1061-1640G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279465
chr2:233279468 G
G
 C
C
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1637G>C
c.1061-1637G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279468
chr2:233279472 G
G
 T
T
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1633G>T
c.1061-1633G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279472
chr2:233279497 G
G
 A
A
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1608G>A
c.1061-1608G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279497
chr2:233279501 A
A
 C
C
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1604A>C
c.1061-1604A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279501
chr2:233279502 G
G
 A
A
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1603G>A
c.1061-1603G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279502
chr2:233279508 T
T
 A
A
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1597T>A
c.1061-1597T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279508
chr2:233279524 T
T
 G
G
 1 a0002c0002t0002g0280
a0002c0002t0002g0280
 1 HG02155.hp2
HG02155.hp2
 intron_variant MODIFIER c.1061-1581T>G
c.1061-1581T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279524
chr2:233279537 A
A
 T
T
 1 a0001c0001t0001g0136
a0001c0001t0001g0136
 1 NA18956.hp2
NA18956.hp2
 intron_variant MODIFIER c.1061-1568A>T
c.1061-1568A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279537
chr2:233279550 T
T
 G
G
 4 a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0200
others(1): Show 
a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
 5 HG02257.hp2
HG02717.hp2
HG03209.hp1
others(2): Show 
HG02257.hp2
HG02717.hp2
HG03209.hp1
HG03225.hp2
HG03579.hp2
 intron_variant MODIFIER c.1061-1555T>G
c.1061-1555T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279550
chr2:233279621 G
G
 T
T
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.1061-1484G>T
c.1061-1484G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279621
chr2:233279934 T
T
 C
C
 6 a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0062
others(3): Show 
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0062
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0130
 6 HG00673.hp2
NA18950.hp1
NA18982.hp1
others(3): Show 
HG00673.hp2
NA18950.hp1
NA18982.hp1
NA19010.hp1
NA19060.hp1
NA19072.hp1
 intron_variant MODIFIER c.1061-1171T>C
c.1061-1171T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279934
chr2:233279936 G
G
 A
A
 1 a0002c0002t0006g0252
a0002c0002t0006g0252
 1 HG02630.hp2
HG02630.hp2
 intron_variant MODIFIER c.1061-1169G>A
c.1061-1169G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279936
chr2:233279964 A
A
 G
G
 1 a0002c0002t0002g0221
a0002c0002t0002g0221
 1 HG02970.hp2
HG02970.hp2
 intron_variant MODIFIER c.1061-1141A>G
c.1061-1141A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233279964
chr2:233280379 C
C
 A
A
 8 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(5): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0011g0014
 9 HG01109.hp1
HG02055.hp1
HG02647.hp1
others(6): Show 
HG01109.hp1
HG02055.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG03098.hp1
HG03540.hp1
HG06807.hp1
NA18906.hp1
 intron_variant MODIFIER c.1061-726C>A
c.1061-726C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233280379
chr2:233280441 A
A
 G
G
 1 a0002c0002t0002g0239
a0002c0002t0002g0239
 1 HG03710.hp2
HG03710.hp2
 intron_variant MODIFIER c.1061-664A>G
c.1061-664A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233280441
chr2:233280713 A
A
 G
G
 40 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(37): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0020g0151
a0001c0001t0021g0144
a0001c0001t0023g0110
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 43 HG00621.hp1
HG00733.hp2
HG00741.hp1
others(40): Show 
HG00621.hp1
HG00733.hp2
HG00741.hp1
HG02074.hp1
HG02083.hp2
HG02132.hp1
HG02145.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA18991.hp2
NA19001.hp2
NA19056.hp1
NA19058.hp2
NA19081.hp1
NA19082.hp2
NA20752.hp1
 intron_variant MODIFIER c.1061-392A>G
c.1061-392A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233280713
chr2:233280741 T
T
 A
A
 4 a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
others(1): Show 
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 4 HG02965.hp2
HG03471.hp1
NA19043.hp2
others(1): Show 
HG02965.hp2
HG03471.hp1
NA19043.hp2
NA20129.hp2
 intron_variant MODIFIER c.1061-364T>A
c.1061-364T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233280741
chr2:233280760 G
G
 A
A
 31 a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
others(28): Show 
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
 31 HG02145.hp2
HG02615.hp2
HG02717.hp1
others(28): Show 
HG02145.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG02965.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA19086.hp2
 intron_variant MODIFIER c.1061-345G>A
c.1061-345G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 10/17 chr2 233280760
chr2:233281315 A
A
 G
G
 6 a0002c0002t0002g0027
a0002c0002t0002g0236
a0002c0002t0002g0237
others(3): Show 
a0002c0002t0002g0027
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0251
a0002c0002t0002g0262
 7 HG00099.hp2
HG00642.hp1
HG01255.hp1
others(4): Show 
HG00099.hp2
HG00642.hp1
HG01255.hp1
HG02300.hp1
HG02723.hp2
HG03490.hp1
HG03491.hp2
 intron_variant MODIFIER c.1131+140A>G
c.1131+140A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233281315
chr2:233281340 A
A
 T
T
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.1131+165A>T
c.1131+165A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233281340
chr2:233281403 T
T
 C
C
 203 a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
others(200): Show 
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 228 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(225): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1131+228T>C
c.1131+228T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233281403
chr2:233281452 T
T
 C
C
 2 a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0190
a0001c0001t0003g0191
 2 HG02559.hp2
HG02809.hp2
HG02559.hp2
HG02809.hp2
 intron_variant MODIFIER c.1131+277T>C
c.1131+277T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233281452
chr2:233281465 G
G
 A
A
 1 a0001c0001t0003g0095
a0001c0001t0003g0095
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1131+290G>A
c.1131+290G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233281465
chr2:233281716 G
G
 C
C
 33 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(30): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
 33 HG00733.hp2
HG00741.hp1
HG02145.hp2
others(30): Show 
HG00733.hp2
HG00741.hp1
HG02145.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1131+541G>C
c.1131+541G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233281716
chr2:233281973 C
C
 T
T
 1 a0001c0001t0004g0192
a0001c0001t0004g0192
 1 HG03704.hp2
HG03704.hp2
 intron_variant MODIFIER c.1132-709C>T
c.1132-709C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233281973
chr2:233281997 A
A
 G
G
 1 a0001c0001t0003g0150
a0001c0001t0003g0150
 1 NA19030.hp2
NA19030.hp2
 intron_variant MODIFIER c.1132-685A>G
c.1132-685A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233281997
chr2:233282094 T
T
 C
C
 148 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(145): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 163 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(160): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02818.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp2
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18906.hp1
NA18939.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19056.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA20752.hp1
NA21309.hp1
 intron_variant MODIFIER c.1132-588T>C
c.1132-588T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282094
chr2:233282135 G
G
 A
A
 1 a0001c0001t0001g0063
a0001c0001t0001g0063
 1 NA18983.hp1
NA18983.hp1
 intron_variant MODIFIER c.1132-547G>A
c.1132-547G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282135
chr2:233282148 T
T
 C
C
 10 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(7): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0016g0284
 10 HG01358.hp1
HG02145.hp1
HG02280.hp2
others(7): Show 
HG01358.hp1
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.1132-534T>C
c.1132-534T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282148
chr2:233282457 T
T
 A
A
 3 a0002c0002t0005g0230
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0230
a0002c0002t0005g0256
a0002c0002t0005g0257
 3 HG00558.hp1
NA19077.hp1
NA19079.hp2
HG00558.hp1
NA19077.hp1
NA19079.hp2
 intron_variant MODIFIER c.1132-225T>A
c.1132-225T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282457
chr2:233282500 T
T
 C
C
 7 a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0200
others(4): Show 
a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0222
 8 HG01884.hp2
HG02257.hp2
HG02717.hp2
others(5): Show 
HG01884.hp2
HG02257.hp2
HG02717.hp2
HG02896.hp2
HG03209.hp1
HG03225.hp2
HG03579.hp2
NA19240.hp2
 intron_variant MODIFIER c.1132-182T>C
c.1132-182T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282500
chr2:233282521 C
C
 T
T
 1 a0001c0001t0001g0083
a0001c0001t0001g0083
 1 NA18963.hp1
NA18963.hp1
 intron_variant MODIFIER c.1132-161C>T
c.1132-161C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282521
chr2:233282578 G
G
 A
A
 1 a0002c0002t0002g0251
a0002c0002t0002g0251
 1 HG00099.hp2
HG00099.hp2
 intron_variant MODIFIER c.1132-104G>A
c.1132-104G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282578
chr2:233282586 A
A
 T
T
 3 a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0140
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0140
 3 NA18959.hp1
NA18974.hp1
NA18989.hp1
NA18959.hp1
NA18974.hp1
NA18989.hp1
 intron_variant MODIFIER c.1132-96A>T
c.1132-96A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282586
chr2:233282663 C
C
 T
T
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.1132-19C>T
c.1132-19C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 11/17 chr2 233282663
chr2:233282884 T
T
 A
A
 39 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(36): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 42 HG00621.hp1
HG00733.hp2
HG00741.hp1
others(39): Show 
HG00621.hp1
HG00733.hp2
HG00741.hp1
HG02083.hp2
HG02132.hp1
HG02145.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA18991.hp2
NA19001.hp2
NA19056.hp1
NA19058.hp2
NA19081.hp1
NA19082.hp2
NA20752.hp1
 intron_variant MODIFIER c.1203+131T>A
c.1203+131T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233282884
chr2:233282967 C
C
 T
T
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.1203+214C>T
c.1203+214C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233282967
chr2:233283327 G
G
 A
A
 1 a0002c0002t0002g0236
a0002c0002t0002g0236
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.1203+574G>A
c.1203+574G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283327
chr2:233283352 A
A
 T
T
 4 a0001c0001t0003g0098
a0001c0001t0009g0060
a0001c0001t0009g0072
others(1): Show 
a0001c0001t0003g0098
a0001c0001t0009g0060
a0001c0001t0009g0072
a0001c0001t0009g0133
 4 HG02486.hp1
HG02486.hp2
HG02896.hp1
others(1): Show 
HG02486.hp1
HG02486.hp2
HG02896.hp1
HG02897.hp1
 intron_variant MODIFIER c.1203+599A>T
c.1203+599A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283352
chr2:233283457 T
T
 TA
TA
 5 a0001c0001t0003g0009
a0001c0001t0003g0048
a0002c0002t0002g0215
others(2): Show 
a0001c0001t0003g0009
a0001c0001t0003g0048
a0002c0002t0002g0215
a0002c0002t0002g0258
a0002c0002t0005g0241
 7 HG02523.hp2
HG02897.hp2
HG02922.hp1
others(4): Show 
HG02523.hp2
HG02897.hp2
HG02922.hp1
HG02976.hp1
HG03130.hp1
NA19000.hp1
NA19081.hp2
 intron_variant MODIFIER c.1203+718dupA
c.1203+718dupA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233283457
chr2:233283457 T
T
 TAA
TAA
 64 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(61): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0090
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0005c0006t0003g0162
 73 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(70): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00738.hp2
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02486.hp2
HG02559.hp2
HG02647.hp1
HG02683.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG03017.hp1
HG03098.hp1
HG03139.hp1
HG03225.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03704.hp1
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18974.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19030.hp2
NA19043.hp2
NA19058.hp1
NA19063.hp2
NA19078.hp1
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
NA21309.hp2
 intron_variant MODIFIER c.1203+717_1203+718d
others(4): Show 
c.1203+717_1203+718dupAA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233283457
chr2:233283457 T
T
 TAAA
TAAA
 37 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(34): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0021g0144
a0001c0001t0023g0110
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 40 HG00621.hp1
HG00733.hp2
HG00741.hp1
others(37): Show 
HG00621.hp1
HG00733.hp2
HG00741.hp1
HG02083.hp2
HG02132.hp1
HG02145.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02922.hp2
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp2
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp2
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA18991.hp2
NA19001.hp2
NA19056.hp1
NA19058.hp2
NA19081.hp1
NA19082.hp2
NA20752.hp1
 intron_variant MODIFIER c.1203+716_1203+718d
others(5): Show 
c.1203+716_1203+718dupAAA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233283457
chr2:233283472 T
T
 A
A
 1 a0001c0001t0003g0048
a0001c0001t0003g0048
 1 HG02897.hp2
HG02897.hp2
 intron_variant MODIFIER c.1203+719T>A
c.1203+719T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283472
chr2:233283499 G
G
 A
A
 6 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(3): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0198
 9 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(6): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG02683.hp1
HG03710.hp1
NA18940.hp1
NA19063.hp2
 intron_variant MODIFIER c.1203+746G>A
c.1203+746G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283499
chr2:233283605 C
C
 T
T
 104 a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
others(101): Show 
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0005c0006t0003g0162
 118 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(115): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00621.hp1
HG00733.hp2
HG00738.hp2
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02083.hp2
HG02132.hp1
HG02135.hp1
HG02145.hp2
HG02258.hp2
HG02486.hp2
HG02559.hp2
HG02615.hp2
HG02647.hp1
HG02683.hp1
HG02717.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp1
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03225.hp1
HG03239.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG04228.hp2
HG06807.hp1
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18986.hp1
NA18989.hp1
NA18990.hp1
NA18991.hp2
NA18994.hp1
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19058.hp2
NA19063.hp2
NA19078.hp1
NA19081.hp1
NA19082.hp2
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp2
 intron_variant MODIFIER c.1203+852C>T
c.1203+852C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283605
chr2:233283655 A
A
 G
G
 1 a0001c0005t0003g0183
a0001c0005t0003g0183
 1 NA20129.hp2
NA20129.hp2
 intron_variant MODIFIER c.1203+902A>G
c.1203+902A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283655
chr2:233283734 A
A
 G
G
 1 a0002c0002t0006g0203
a0002c0002t0006g0203
 1 HG02723.hp1
HG02723.hp1
 intron_variant MODIFIER c.1203+981A>G
c.1203+981A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283734
chr2:233283905 C
C
 T
T
 2 a0001c0001t0003g0046
a0001c0001t0003g0122
a0001c0001t0003g0046
a0001c0001t0003g0122
 2 HG02647.hp1
NA18906.hp1
HG02647.hp1
NA18906.hp1
 intron_variant MODIFIER c.1203+1152C>T
c.1203+1152C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283905
chr2:233283970 G
G
 A
A
 94 a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
others(91): Show 
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
 108 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(105): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02896.hp2
HG02970.hp2
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18947.hp1
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18954.hp2
NA18957.hp1
NA18963.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp2
NA18992.hp1
NA19000.hp1
NA19005.hp2
NA19010.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19079.hp2
NA19081.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
 intron_variant MODIFIER c.1203+1217G>A
c.1203+1217G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233283970
chr2:233284158 CT
CT
 C
C
 288 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0004
others(285): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0008
a0001c0001t0001g0010
a0001c0001t0001g0015
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0021
a0001c0001t0001g0022
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0062
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0088
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0136
a0001c0001t0001g0137
a0001c0001t0001g0139
a0001c0001t0001g0152
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0055
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0008g0039
a0001c0001t0008g0040
a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0009g0060
a0001c0001t0009g0072
a0001c0001t0009g0133
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0017g0002
a0001c0001t0019g0170
a0001c0001t0020g0151
a0001c0001t0021g0144
a0001c0001t0022g0056
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
a0005c0006t0003g0162
 353 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(350): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00423.hp1
HG00423.hp2
HG00558.hp1
HG00558.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01256.hp2
HG01257.hp1
HG01257.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01358.hp2
HG01496.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02071.hp1
HG02071.hp2
HG02074.hp1
HG02074.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02129.hp1
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02300.hp2
HG02486.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18906.hp1
NA18906.hp2
NA18939.hp1
NA18939.hp2
NA18940.hp1
NA18940.hp2
NA18944.hp1
NA18944.hp2
NA18946.hp1
NA18946.hp2
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18953.hp1
NA18953.hp2
NA18954.hp1
NA18954.hp2
NA18956.hp1
NA18956.hp2
NA18957.hp1
NA18957.hp2
NA18959.hp1
NA18959.hp2
NA18963.hp1
NA18963.hp2
NA18966.hp1
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18972.hp1
NA18972.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18977.hp2
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18982.hp1
NA18982.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18985.hp1
NA18985.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA18999.hp1
NA18999.hp2
NA19000.hp1
NA19000.hp2
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19004.hp2
NA19005.hp1
NA19005.hp2
NA19010.hp1
NA19010.hp2
NA19011.hp1
NA19011.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19056.hp1
NA19056.hp2
NA19058.hp1
NA19058.hp2
NA19060.hp1
NA19060.hp2
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19070.hp1
NA19070.hp2
NA19072.hp1
NA19072.hp2
NA19077.hp1
NA19077.hp2
NA19078.hp1
NA19078.hp2
NA19079.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp1
NA19082.hp2
NA19086.hp1
NA19086.hp2
NA19087.hp1
NA19087.hp2
NA19088.hp1
NA19088.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp1
NA20129.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20752.hp2
NA20905.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1203+1417delT
c.1203+1417delT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233284158
chr2:233284233 C
C
 T
T
 1 a0001c0001t0003g0167
a0001c0001t0003g0167
 1 NA19004.hp1
NA19004.hp1
 intron_variant MODIFIER c.1203+1480C>T
c.1203+1480C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233284233
chr2:233284270 C
C
 A
A
 1 a0002c0002t0002g0227
a0002c0002t0002g0227
 1 HG01978.hp2
HG01978.hp2
 intron_variant MODIFIER c.1203+1517C>A
c.1203+1517C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233284270
chr2:233284401 G
G
 A
A
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.1203+1648G>A
c.1203+1648G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233284401
chr2:233284540 A
A
 G
G
 211 a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
others(208): Show 
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
a0005c0006t0003g0162
 239 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(236): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00621.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02083.hp2
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19058.hp2
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1203+1787A>G
c.1203+1787A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233284540
chr2:233284628 A
A
 G
G
 115 a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
others(112): Show 
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0015g0202
a0002c0002t0016g0284
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0005c0006t0003g0162
 129 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(126): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00423.hp2
HG00621.hp1
HG00733.hp2
HG00738.hp2
HG00741.hp1
HG01081.hp2
HG01109.hp1
HG01168.hp2
HG01255.hp2
HG01261.hp1
HG01358.hp1
HG01516.hp1
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01978.hp1
HG02055.hp1
HG02080.hp1
HG02083.hp2
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp2
HG02486.hp2
HG02559.hp2
HG02615.hp2
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02717.hp1
HG02723.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03225.hp1
HG03239.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp2
HG03491.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG04228.hp2
HG06807.hp1
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18986.hp1
NA18989.hp1
NA18990.hp1
NA18991.hp2
NA18994.hp1
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19058.hp2
NA19063.hp2
NA19078.hp1
NA19081.hp1
NA19082.hp2
NA19086.hp2
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1203+1875A>G
c.1203+1875A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233284628
chr2:233284962 C
C
 T
T
 1 a0002c0002t0002g0223
a0002c0002t0002g0223
 1 HG03471.hp2
HG03471.hp2
 intron_variant MODIFIER c.1203+2209C>T
c.1203+2209C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233284962
chr2:233285017 A
A
 T
T
 27 a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
others(24): Show 
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0019g0170
a0005c0006t0003g0162
 29 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(26): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG03017.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA20905.hp2
 intron_variant MODIFIER c.1203+2264A>T
c.1203+2264A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233285017
chr2:233285064 C
C
 T
T
 1 a0001c0001t0003g0095
a0001c0001t0003g0095
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1203+2311C>T
c.1203+2311C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233285064
chr2:233285262 CT
CT
 C
C
 42 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(39): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0021g0144
a0001c0001t0023g0110
 43 HG00733.hp2
HG00741.hp1
HG01109.hp1
others(40): Show 
HG00733.hp2
HG00741.hp1
HG01109.hp1
HG02055.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02818.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02976.hp2
HG03098.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
HG06807.hp1
NA18906.hp1
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19030.hp2
NA19056.hp1
NA19081.hp1
NA19086.hp2
NA20752.hp1
 intron_variant MODIFIER c.1203+2517delT
c.1203+2517delT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233285262
chr2:233285360 G
G
 T
T
 1 a0002c0002t0002g0281
a0002c0002t0002g0281
 1 NA18954.hp2
NA18954.hp2
 intron_variant MODIFIER c.1203+2607G>T
c.1203+2607G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233285360
chr2:233285370 A
A
 G
G
 4 a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0200
others(1): Show 
a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
 5 HG02257.hp2
HG02717.hp2
HG03209.hp1
others(2): Show 
HG02257.hp2
HG02717.hp2
HG03209.hp1
HG03225.hp2
HG03579.hp2
 intron_variant MODIFIER c.1203+2617A>G
c.1203+2617A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233285370
chr2:233285724 T
T
 C
C
 1 a0001c0001t0001g0059
a0001c0001t0001g0059
 1 HG02071.hp1
HG02071.hp1
 intron_variant MODIFIER c.1203+2971T>C
c.1203+2971T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233285724
chr2:233285872 A
A
 T
T
 1 a0001c0001t0001g0078
a0001c0001t0001g0078
 1 HG02129.hp1
HG02129.hp1
 intron_variant MODIFIER c.1203+3119A>T
c.1203+3119A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233285872
chr2:233286065 G
G
 A
A
 1 a0001c0001t0004g0104
a0001c0001t0004g0104
 1 NA18944.hp1
NA18944.hp1
 intron_variant MODIFIER c.1203+3312G>A
c.1203+3312G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286065
chr2:233286109 G
G
 C
C
 184 a0001c0001t0001g0002
a0001c0001t0001g0008
a0001c0001t0001g0036
others(181): Show 
a0001c0001t0001g0002
a0001c0001t0001g0008
a0001c0001t0001g0036
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0057
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0125
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0152
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0093
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0011g0014
a0001c0001t0017g0002
a0001c0001t0019g0170
a0001c0001t0020g0151
a0001c0001t0021g0144
a0001c0001t0022g0056
a0001c0001t0023g0110
a0001c0007t0003g0097
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
 209 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(206): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00423.hp1
HG00423.hp2
HG00558.hp1
HG00558.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00733.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01169.hp2
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01257.hp2
HG01346.hp2
HG01358.hp2
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02083.hp2
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02258.hp1
HG02258.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02886.hp1
HG02896.hp2
HG02965.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp1
HG03239.hp1
HG03239.hp2
HG03471.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp2
NA18612.hp2
NA18939.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18953.hp2
NA18954.hp1
NA18954.hp2
NA18956.hp1
NA18959.hp1
NA18963.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18972.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18982.hp1
NA18982.hp2
NA18983.hp2
NA18985.hp1
NA18985.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp2
NA19004.hp1
NA19005.hp1
NA19005.hp2
NA19010.hp2
NA19011.hp2
NA19030.hp2
NA19056.hp1
NA19058.hp1
NA19058.hp2
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19090.hp2
NA19240.hp2
NA20752.hp1
NA20905.hp2
 intron_variant MODIFIER c.1203+3356G>C
c.1203+3356G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286109
chr2:233286266 G
G
 A
A
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.1203+3513G>A
c.1203+3513G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286266
chr2:233286305 A
A
 G
G
 1 a0001c0001t0001g0067
a0001c0001t0001g0067
 1 HG02074.hp2
HG02074.hp2
 intron_variant MODIFIER c.1204-3549A>G
c.1204-3549A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286305
chr2:233286311 T
T
 G
G
 145 a0001c0001t0001g0124
a0001c0001t0003g0009
a0001c0001t0003g0011
others(142): Show 
a0001c0001t0001g0124
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0194
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0019g0170
a0001c0001t0020g0151
a0001c0007t0003g0097
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
a0005c0006t0003g0162
 168 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(165): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00621.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp2
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02074.hp1
HG02080.hp1
HG02083.hp1
HG02083.hp2
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02155.hp2
HG02165.hp2
HG02258.hp1
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02896.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp2
HG03225.hp1
HG03239.hp2
HG03453.hp1
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03654.hp2
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04228.hp1
HG06807.hp2
NA18522.hp1
NA18939.hp1
NA18940.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp2
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19058.hp1
NA19058.hp2
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp2
NA19082.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp2
NA20905.hp2
NA21309.hp2
 intron_variant MODIFIER c.1204-3543T>G
c.1204-3543T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286311
chr2:233286336 G
G
 A
A
 2 a0001c0001t0008g0039
a0001c0001t0008g0040
a0001c0001t0008g0039
a0001c0001t0008g0040
 2 HG03516.hp1
NA18906.hp2
HG03516.hp1
NA18906.hp2
 intron_variant MODIFIER c.1204-3518G>A
c.1204-3518G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286336
chr2:233286450 A
A
 C
C
 7 a0002c0002t0002g0034
a0002c0002t0002g0215
a0002c0002t0002g0216
others(4): Show 
a0002c0002t0002g0034
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0249
a0002c0002t0002g0267
a0002c0002t0002g0280
a0002c0002t0002g0281
 8 HG02155.hp2
HG02523.hp1
NA18939.hp1
others(5): Show 
HG02155.hp2
HG02523.hp1
NA18939.hp1
NA18954.hp2
NA18983.hp2
NA18992.hp1
NA19081.hp2
NA19089.hp1
 intron_variant MODIFIER c.1204-3404A>C
c.1204-3404A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286450
chr2:233286621 C
C
 CATTTTTT
others(6): Show 
CATTTTTTTTTTTT
 12 a0001c0001t0004g0061
a0001c0001t0004g0089
a0001c0001t0004g0104
others(9): Show 
a0001c0001t0004g0061
a0001c0001t0004g0089
a0001c0001t0004g0104
a0001c0001t0004g0107
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
 12 HG00733.hp2
HG03239.hp1
HG03490.hp2
others(9): Show 
HG00733.hp2
HG03239.hp1
HG03490.hp2
HG03704.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18977.hp1
NA19056.hp1
NA19081.hp1
 intron_variant MODIFIER c.1204-3233_1204-323
others(17): Show 
c.1204-3233_1204-3232insATTTTTTTTTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286621
chr2:233286621 C
C
 CATTTTTT
others(7): Show 
CATTTTTTTTTTTTT
 11 a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0090
others(8): Show 
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0106
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0155
a0001c0001t0004g0193
a0001c0001t0023g0110
a0002c0002t0002g0271
 11 HG01192.hp2
HG03130.hp2
HG03491.hp1
others(8): Show 
HG01192.hp2
HG03130.hp2
HG03491.hp1
HG03669.hp1
HG04228.hp2
NA18974.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
 intron_variant MODIFIER c.1204-3233_1204-323
others(18): Show 
c.1204-3233_1204-3232insATTTTTTTTTTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286621
chr2:233286621 C
C
 CATTTTTT
others(8): Show 
CATTTTTTTTTTTTTT
 5 a0001c0001t0003g0150
a0001c0001t0004g0108
a0001c0001t0004g0111
others(2): Show 
a0001c0001t0003g0150
a0001c0001t0004g0108
a0001c0001t0004g0111
a0001c0001t0004g0145
a0001c0001t0021g0144
 5 HG02717.hp1
HG02818.hp1
HG03195.hp1
others(2): Show 
HG02717.hp1
HG02818.hp1
HG03195.hp1
NA19030.hp2
NA20752.hp1
 intron_variant MODIFIER c.1204-3233_1204-323
others(19): Show 
c.1204-3233_1204-3232insATTTTTTTTTTTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286621
chr2:233286621 C
C
 CATTTTTT
others(9): Show 
CATTTTTTTTTTTTTTT
 3 a0001c0001t0004g0109
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0109
a0001c0001t0004g0112
a0001c0001t0004g0114
 3 HG00741.hp1
HG02615.hp2
HG03540.hp2
HG00741.hp1
HG02615.hp2
HG03540.hp2
 intron_variant MODIFIER c.1204-3233_1204-323
others(20): Show 
c.1204-3233_1204-3232insATTTTTTTTTTTTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286621
chr2:233286621 C
C
 CT
CT
 18 a0001c0001t0001g0038
a0001c0001t0001g0042
a0001c0001t0001g0057
others(15): Show 
a0001c0001t0001g0038
a0001c0001t0001g0042
a0001c0001t0001g0057
a0001c0001t0001g0066
a0001c0001t0001g0070
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0083
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0136
a0001c0001t0001g0152
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0008g0040
a0001c0001t0012g0142
a0002c0002t0002g0224
 18 HG00408.hp2
HG00639.hp2
HG01070.hp1
others(15): Show 
HG00408.hp2
HG00639.hp2
HG01070.hp1
HG01346.hp1
HG01358.hp2
HG02055.hp2
HG02145.hp2
HG02683.hp2
HG02818.hp2
HG03139.hp1
HG03516.hp1
NA18940.hp2
NA18956.hp2
NA18963.hp1
NA18972.hp2
NA19090.hp2
NA20129.hp1
NA21309.hp2
 intron_variant MODIFIER c.1204-3211dupT
c.1204-3211dupT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233286621
chr2:233286621 C
C
 CTT
CTT
 112 a0001c0001t0003g0009
a0001c0001t0003g0019
a0001c0001t0003g0020
others(109): Show 
a0001c0001t0003g0009
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0115
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0276
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0279
a0002c0002t0010g0217
a0002c0002t0013g0265
a0002c0002t0018g0189
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 130 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(127): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00280.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp2
HG01346.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02698.hp2
HG02717.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02896.hp2
HG02922.hp1
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03130.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp2
HG03239.hp2
HG03453.hp1
HG03471.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03704.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04228.hp1
HG06807.hp2
NA18522.hp1
NA18939.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19058.hp1
NA19060.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19240.hp2
NA20905.hp2
 intron_variant MODIFIER c.1204-3212_1204-321
others(6): Show 
c.1204-3212_1204-3211dupTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233286621
chr2:233286621 C
C
 CTTT
CTTT
 12 a0001c0001t0003g0168
a0001c0001t0003g0187
a0002c0002t0002g0238
others(9): Show 
a0001c0001t0003g0168
a0001c0001t0003g0187
a0002c0002t0002g0238
a0002c0002t0002g0261
a0002c0002t0002g0267
a0002c0002t0002g0280
a0002c0002t0005g0211
a0002c0002t0005g0278
a0002c0002t0010g0283
a0002c0002t0014g0255
a0002c0004t0002g0204
a0002c0004t0002g0209
 12 HG01255.hp1
HG01496.hp2
HG02135.hp1
others(9): Show 
HG01255.hp1
HG01496.hp2
HG02135.hp1
HG02155.hp2
HG02258.hp1
HG03209.hp2
HG03688.hp2
HG04184.hp2
NA18992.hp1
NA19005.hp2
NA19010.hp2
NA19090.hp1
 intron_variant MODIFIER c.1204-3213_1204-321
others(7): Show 
c.1204-3213_1204-3211dupTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233286621
chr2:233286621 C
C
 CTTTTTTT
others(10): Show 
CTTTTTTTTTTTTTTTTT
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.1204-3227_1204-321
others(21): Show 
c.1204-3227_1204-3211dupTTTTTTTTTTTTTTTTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233286621
chr2:233286621 CT
CT
 C
C
 6 a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0082
others(3): Show 
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0082
a0001c0001t0001g0127
a0001c0001t0001g0132
a0001c0001t0001g0197
 6 HG01070.hp2
HG01168.hp1
HG01169.hp2
others(3): Show 
HG01070.hp2
HG01168.hp1
HG01169.hp2
NA18939.hp2
NA19043.hp1
NA19072.hp1
 intron_variant MODIFIER c.1204-3211delT
c.1204-3211delT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233286621
chr2:233286643 T
T
 G
G
 31 a0001c0001t0003g0150
a0001c0001t0004g0061
a0001c0001t0004g0086
others(28): Show 
a0001c0001t0003g0150
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
a0002c0002t0002g0271
 31 HG00733.hp2
HG00741.hp1
HG01192.hp2
others(28): Show 
HG00733.hp2
HG00741.hp1
HG01192.hp2
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19030.hp2
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1204-3211T>G
c.1204-3211T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286643
chr2:233286643 T
T
 TTTTTTG
TTTTTTG
 6 a0001c0001t0003g0045
a0001c0001t0003g0047
a0001c0001t0003g0048
others(3): Show 
a0001c0001t0003g0045
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
 6 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(3): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG03540.hp1
HG06807.hp1
 intron_variant MODIFIER c.1204-3211_1204-321
others(10): Show 
c.1204-3211_1204-3210insTTTTTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286643
chr2:233286643 T
T
 TTTTTTTT
others(7): Show 
TTTTTTTTTTTTTTG
 1 a0001c0001t0004g0105
a0001c0001t0004g0105
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.1204-3211_1204-321
others(18): Show 
c.1204-3211_1204-3210insTTTTTTTTTTTTTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286643
chr2:233286877 G
G
 A
A
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.1204-2977G>A
c.1204-2977G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286877
chr2:233286915 G
G
 A
A
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.1204-2939G>A
c.1204-2939G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233286915
chr2:233287070 T
T
 G
G
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.1204-2784T>G
c.1204-2784T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287070
chr2:233287178 C
C
 T
T
 1 a0002c0002t0006g0254
a0002c0002t0006g0254
 1 NA21309.hp1
NA21309.hp1
 intron_variant MODIFIER c.1204-2676C>T
c.1204-2676C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287178
chr2:233287270 G
G
 A
A
 9 a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
others(6): Show 
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
 9 HG02145.hp1
HG02280.hp2
HG02630.hp2
others(6): Show 
HG02145.hp1
HG02280.hp2
HG02630.hp2
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG03098.hp2
NA19030.hp1
NA21309.hp1
 intron_variant MODIFIER c.1204-2584G>A
c.1204-2584G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287270
chr2:233287427 A
A
 G
G
 15 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(12): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0198
a0001c0007t0003g0097
 18 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(15): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01891.hp1
HG02486.hp2
HG02683.hp1
HG02818.hp2
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.1204-2427A>G
c.1204-2427A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287427
chr2:233287463 T
T
 G
G
 1 a0001c0001t0001g0075
a0001c0001t0001g0075
 1 NA19090.hp2
NA19090.hp2
 intron_variant MODIFIER c.1204-2391T>G
c.1204-2391T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287463
chr2:233287595 A
A
 G
G
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.1204-2259A>G
c.1204-2259A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287595
chr2:233287599 C
C
 T
T
 2 a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0010g0217
a0002c0002t0010g0283
 2 HG02257.hp1
HG03209.hp2
HG02257.hp1
HG03209.hp2
 intron_variant MODIFIER c.1204-2255C>T
c.1204-2255C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287599
chr2:233287643 C
C
 T
T
 42 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(39): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0021g0144
a0001c0001t0023g0110
 43 HG00733.hp2
HG00741.hp1
HG01109.hp1
others(40): Show 
HG00733.hp2
HG00741.hp1
HG01109.hp1
HG02055.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02818.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02976.hp2
HG03098.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
HG06807.hp1
NA18906.hp1
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19030.hp2
NA19056.hp1
NA19081.hp1
NA19086.hp2
NA20752.hp1
 intron_variant MODIFIER c.1204-2211C>T
c.1204-2211C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287643
chr2:233287692 A
A
 G
G
 1 a0001c0001t0004g0044
a0001c0001t0004g0044
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.1204-2162A>G
c.1204-2162A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287692
chr2:233287707 G
G
 A
A
 1 a0001c0001t0001g0041
a0001c0001t0001g0041
 1 HG02165.hp1
HG02165.hp1
 intron_variant MODIFIER c.1204-2147G>A
c.1204-2147G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287707
chr2:233287873 T
T
 C
C
 204 a0001c0001t0001g0078
a0001c0001t0003g0007
a0001c0001t0003g0009
others(201): Show 
a0001c0001t0001g0078
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 229 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(226): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1204-1981T>C
c.1204-1981T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287873
chr2:233287956 G
G
 A
A
 30 a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
others(27): Show 
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
 30 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(27): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1204-1898G>A
c.1204-1898G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233287956
chr2:233288077 C
C
 A
A
 6 a0001c0001t0003g0007
a0001c0001t0003g0181
a0001c0005t0003g0092
others(3): Show 
a0001c0001t0003g0007
a0001c0001t0003g0181
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 9 HG02965.hp2
HG03453.hp2
HG03471.hp1
others(6): Show 
HG02965.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
NA18522.hp2
NA19043.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
 intron_variant MODIFIER c.1204-1777C>A
c.1204-1777C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233288077
chr2:233288529 A
A
 G
G
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.1204-1325A>G
c.1204-1325A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233288529
chr2:233288657 T
T
 TGATCATG
others(9): Show 
TGATCATGCACTGCATA
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1204-1194_1204-117
others(20): Show 
c.1204-1194_1204-1179dupTCATGCACTGCATAGA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233288657
chr2:233288830 G
G
 A
A
 1 a0001c0001t0004g0172
a0001c0001t0004g0172
 1 NA18966.hp2
NA18966.hp2
 intron_variant MODIFIER c.1204-1024G>A
c.1204-1024G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233288830
chr2:233289071 C
C
 G
G
 188 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(185): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 210 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(207): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp2
NA18522.hp2
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1204-783C>G
c.1204-783C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289071
chr2:233289147 G
G
 T
T
 1 a0001c0001t0004g0192
a0001c0001t0004g0192
 1 HG03704.hp2
HG03704.hp2
 intron_variant MODIFIER c.1204-707G>T
c.1204-707G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289147
chr2:233289177 A
A
 C
C
 1 a0001c0001t0007g0156
a0001c0001t0007g0156
 1 HG03669.hp2
HG03669.hp2
 intron_variant MODIFIER c.1204-677A>C
c.1204-677A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289177
chr2:233289376 G
G
 GGTGTGTG
others(13): Show 
GGTGTGTGTGTGTGTGTGTGT
 1 a0002c0002t0002g0250
a0002c0002t0002g0250
 1 HG01175.hp2
HG01175.hp2
 intron_variant MODIFIER c.1204-478_1204-477i
others(22): Show 
c.1204-478_1204-477insGTGTGTGTGTGTGTGTGTGT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289376
chr2:233289377 A
A
 ATG
ATG
 4 a0001c0001t0001g0041
a0001c0001t0001g0071
a0001c0001t0001g0081
others(1): Show 
a0001c0001t0001g0041
a0001c0001t0001g0071
a0001c0001t0001g0081
a0001c0001t0001g0125
 4 HG02165.hp1
NA18612.hp2
NA18950.hp1
others(1): Show 
HG02165.hp1
NA18612.hp2
NA18950.hp1
NA19063.hp1
 intron_variant MODIFIER c.1204-446_1204-445d
others(4): Show 
c.1204-446_1204-445dupTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTG
ATGTG
 4 a0001c0001t0001g0051
a0001c0001t0001g0065
a0001c0001t0003g0098
others(1): Show 
a0001c0001t0001g0051
a0001c0001t0001g0065
a0001c0001t0003g0098
a0002c0002t0015g0202
 4 HG02080.hp2
HG02486.hp2
HG03486.hp2
others(1): Show 
HG02080.hp2
HG02486.hp2
HG03486.hp2
NA19072.hp1
 intron_variant MODIFIER c.1204-448_1204-445d
others(6): Show 
c.1204-448_1204-445dupTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTG
ATGTGTG
 4 a0001c0001t0003g0009
a0001c0001t0003g0115
a0001c0001t0003g0147
others(1): Show 
a0001c0001t0003g0009
a0001c0001t0003g0115
a0001c0001t0003g0147
a0001c0001t0003g0181
 6 HG02922.hp1
HG02976.hp1
HG03130.hp1
others(3): Show 
HG02922.hp1
HG02976.hp1
HG03130.hp1
HG03453.hp1
NA18522.hp1
NA20300.hp1
 intron_variant MODIFIER c.1204-450_1204-445d
others(8): Show 
c.1204-450_1204-445dupTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(3): Show 
ATGTGTGTGTG
 8 a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0201
others(5): Show 
a0002c0002t0002g0023
a0002c0002t0002g0199
a0002c0002t0002g0201
a0002c0002t0002g0251
a0002c0002t0005g0259
a0002c0002t0005g0277
a0002c0002t0006g0203
a0002c0002t0006g0252
 9 HG00099.hp2
HG02257.hp2
HG02630.hp2
others(6): Show 
HG00099.hp2
HG02257.hp2
HG02630.hp2
HG02717.hp2
HG02723.hp1
HG03225.hp2
HG03579.hp2
NA18981.hp2
NA19088.hp2
 intron_variant MODIFIER c.1204-454_1204-445d
others(12): Show 
c.1204-454_1204-445dupTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(5): Show 
ATGTGTGTGTGTG
 8 a0002c0002t0002g0029
a0002c0002t0002g0200
a0002c0002t0002g0218
others(5): Show 
a0002c0002t0002g0029
a0002c0002t0002g0200
a0002c0002t0002g0218
a0002c0002t0002g0222
a0002c0002t0002g0227
a0002c0002t0002g0231
a0002c0002t0002g0236
a0002c0002t0005g0029
 8 HG00735.hp1
HG01256.hp1
HG01884.hp2
others(5): Show 
HG00735.hp1
HG01256.hp1
HG01884.hp2
HG01978.hp2
HG03209.hp1
HG03491.hp2
NA18963.hp2
NA19240.hp2
 intron_variant MODIFIER c.1204-456_1204-445d
others(14): Show 
c.1204-456_1204-445dupTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(7): Show 
ATGTGTGTGTGTGTG
 18 a0001c0001t0003g0020
a0002c0002t0002g0027
a0002c0002t0002g0030
others(15): Show 
a0001c0001t0003g0020
a0002c0002t0002g0027
a0002c0002t0002g0030
a0002c0002t0002g0215
a0002c0002t0002g0221
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0232
a0002c0002t0005g0013
a0002c0002t0005g0030
a0002c0002t0005g0214
a0002c0002t0005g0256
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0014g0255
 22 HG00140.hp1
HG00280.hp2
HG01070.hp1
others(19): Show 
HG00140.hp1
HG00280.hp2
HG01070.hp1
HG01071.hp1
HG01516.hp1
HG01517.hp1
HG02071.hp2
HG02145.hp1
HG02300.hp1
HG02886.hp2
HG02895.hp1
HG02970.hp2
HG03098.hp2
HG03490.hp1
HG04184.hp2
NA18948.hp1
NA18971.hp1
NA18972.hp1
NA18987.hp1
NA19079.hp2
NA19081.hp2
NA21309.hp1
 intron_variant MODIFIER c.1204-458_1204-445d
others(16): Show 
c.1204-458_1204-445dupTGTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(9): Show 
ATGTGTGTGTGTGTGTG
 25 a0001c0001t0003g0169
a0001c0001t0003g0177
a0002c0002t0002g0028
others(22): Show 
a0001c0001t0003g0169
a0001c0001t0003g0177
a0002c0002t0002g0028
a0002c0002t0002g0033
a0002c0002t0002g0213
a0002c0002t0002g0219
a0002c0002t0002g0226
a0002c0002t0002g0228
a0002c0002t0002g0233
a0002c0002t0002g0238
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0281
a0002c0002t0005g0031
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0279
a0002c0002t0006g0253
a0002c0002t0013g0265
a0002c0008t0005g0031
 27 HG00642.hp1
HG00642.hp2
HG01069.hp1
others(24): Show 
HG00642.hp1
HG00642.hp2
HG01069.hp1
HG01071.hp2
HG01099.hp2
HG01109.hp2
HG01255.hp1
HG01891.hp2
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02165.hp2
HG02280.hp2
HG02523.hp2
HG02630.hp1
HG02698.hp2
HG02735.hp2
HG02896.hp2
HG03017.hp1
HG03654.hp2
HG03688.hp2
HG04115.hp1
HG04228.hp1
NA18954.hp2
NA18957.hp1
NA19000.hp1
NA19072.hp2
 intron_variant MODIFIER c.1204-460_1204-445d
others(18): Show 
c.1204-460_1204-445dupTGTGTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(11): Show 
ATGTGTGTGTGTGTGTGTG
 17 a0001c0001t0003g0163
a0001c0001t0003g0174
a0001c0001t0003g0175
others(14): Show 
a0001c0001t0003g0163
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0178
a0002c0002t0002g0024
a0002c0002t0002g0032
a0002c0002t0002g0229
a0002c0002t0002g0234
a0002c0002t0002g0237
a0002c0002t0002g0247
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0276
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0004t0002g0204
 19 HG00408.hp1
HG00423.hp2
HG01168.hp2
others(16): Show 
HG00408.hp1
HG00423.hp2
HG01168.hp2
HG01255.hp2
HG01346.hp2
HG01516.hp2
HG02257.hp1
HG02258.hp1
HG02559.hp1
HG02615.hp1
HG02723.hp2
HG03041.hp1
HG03195.hp2
HG04115.hp2
NA18969.hp1
NA18989.hp2
NA18992.hp1
NA19030.hp1
NA19078.hp1
 intron_variant MODIFIER c.1204-462_1204-445d
others(20): Show 
c.1204-462_1204-445dupTGTGTGTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(13): Show 
ATGTGTGTGTGTGTGTGTGTG
 23 a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0160
others(20): Show 
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0160
a0001c0001t0003g0167
a0001c0001t0003g0176
a0001c0001t0003g0180
a0001c0001t0019g0170
a0002c0002t0002g0034
a0002c0002t0002g0210
a0002c0002t0002g0216
a0002c0002t0002g0223
a0002c0002t0002g0239
a0002c0002t0002g0245
a0002c0002t0002g0249
a0002c0002t0002g0280
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0257
a0002c0002t0005g0260
a0002c0002t0005g0278
a0002c0004t0002g0208
a0004c0009t0002g0266
a0005c0006t0003g0162
 24 HG00099.hp1
HG00558.hp1
HG01081.hp2
others(21): Show 
HG00099.hp1
HG00558.hp1
HG01081.hp2
HG01517.hp2
HG01943.hp1
HG01978.hp1
HG02040.hp2
HG02155.hp2
HG02523.hp1
HG03471.hp2
HG03688.hp1
HG03710.hp2
HG03831.hp2
HG04184.hp1
NA18939.hp1
NA18947.hp1
NA18983.hp2
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19077.hp1
NA19089.hp1
NA20905.hp2
 intron_variant MODIFIER c.1204-464_1204-445d
others(22): Show 
c.1204-464_1204-445dupTGTGTGTGTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(15): Show 
ATGTGTGTGTGTGTGTGTGTGTG
 14 a0001c0001t0003g0019
a0001c0001t0003g0159
a0001c0001t0003g0161
others(11): Show 
a0001c0001t0003g0019
a0001c0001t0003g0159
a0001c0001t0003g0161
a0001c0001t0003g0164
a0001c0001t0003g0179
a0001c0001t0003g0186
a0002c0002t0002g0026
a0002c0002t0002g0246
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0005g0012
a0002c0002t0005g0025
a0002c0002t0005g0035
a0002c0002t0005g0212
 20 HG00673.hp1
HG00741.hp2
HG01069.hp2
others(17): Show 
HG00673.hp1
HG00741.hp2
HG01069.hp2
HG01257.hp1
HG01261.hp2
HG02135.hp2
HG03239.hp2
HG03831.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18986.hp1
NA18990.hp1
NA18990.hp2
NA19058.hp1
NA19060.hp2
NA19065.hp2
NA19087.hp2
 intron_variant MODIFIER c.1204-466_1204-445d
others(24): Show 
c.1204-466_1204-445dupTGTGTGTGTGTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(17): Show 
ATGTGTGTGTGTGTGTGTGTGTGTG
 6 a0001c0001t0003g0165
a0001c0001t0003g0188
a0002c0002t0005g0211
others(3): Show 
a0001c0001t0003g0165
a0001c0001t0003g0188
a0002c0002t0005g0211
a0002c0002t0005g0240
a0002c0004t0002g0205
a0002c0004t0002g0209
 6 HG01496.hp2
HG03704.hp1
HG06807.hp2
others(3): Show 
HG01496.hp2
HG03704.hp1
HG06807.hp2
NA18968.hp2
NA19010.hp2
NA19070.hp1
 intron_variant MODIFIER c.1204-468_1204-445d
others(26): Show 
c.1204-468_1204-445dupTGTGTGTGTGTGTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(19): Show 
ATGTGTGTGTGTGTGTGTGTGTGTGTG
 6 a0001c0001t0003g0168
a0001c0001t0003g0187
a0002c0002t0002g0271
others(3): Show 
a0001c0001t0003g0168
a0001c0001t0003g0187
a0002c0002t0002g0271
a0002c0002t0016g0284
a0002c0004t0002g0206
a0002c0004t0002g0207
 6 HG00639.hp1
HG01175.hp1
HG01192.hp2
others(3): Show 
HG00639.hp1
HG01175.hp1
HG01192.hp2
HG01358.hp1
HG02135.hp1
NA19090.hp1
 intron_variant MODIFIER c.1204-470_1204-445d
others(28): Show 
c.1204-470_1204-445dupTGTGTGTGTGTGTGTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(21): Show 
ATGTGTGTGTGTGTGTGTGTGTGTGTGTG
 2 a0001c0001t0003g0166
a0002c0002t0002g0220
a0001c0001t0003g0166
a0002c0002t0002g0220
 2 HG02622.hp2
NA18947.hp2
HG02622.hp2
NA18947.hp2
 intron_variant MODIFIER c.1204-472_1204-445d
others(30): Show 
c.1204-472_1204-445dupTGTGTGTGTGTGTGTGTGTGTGTGTGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 ATGTGTGT
others(25): Show 
ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
 1 a0002c0002t0010g0283
a0002c0002t0010g0283
 1 HG03209.hp2
HG03209.hp2
 intron_variant MODIFIER c.1204-476_1204-445d
others(34): Show 
c.1204-476_1204-445dupTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289377 A
A
 G
G
 1 a0002c0002t0002g0250
a0002c0002t0002g0250
 1 HG01175.hp2
HG01175.hp2
 intron_variant MODIFIER c.1204-477A>G
c.1204-477A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289377
chr2:233289377 ATG
ATG
 A
A
 15 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(12): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0185
a0001c0001t0003g0198
a0001c0007t0003g0097
 18 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(15): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01891.hp1
HG02080.hp1
HG02683.hp1
HG02818.hp2
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.1204-446_1204-445d
others(4): Show 
c.1204-446_1204-445delTG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289377
chr2:233289408 T
T
 A
A
 14 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(11): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0198
a0001c0007t0003g0097
 17 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(14): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01891.hp1
HG02683.hp1
HG02818.hp2
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.1204-446T>A
c.1204-446T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289408
chr2:233289408 T
T
 TGTGAGAG
others(3): Show 
TGTGAGAGAGA
 6 a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0004g0193
others(3): Show 
a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0004g0193
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0184
 9 HG02258.hp2
HG02965.hp2
HG03453.hp2
others(6): Show 
HG02258.hp2
HG02965.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
NA18522.hp2
NA18981.hp1
NA19043.hp2
NA19240.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(12): Show 
c.1204-445_1204-444insTGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGAGAG
others(5): Show 
TGTGAGAGAGAGA
 2 a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0120
a0001c0001t0003g0121
 2 HG01109.hp1
HG03540.hp1
HG01109.hp1
HG03540.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(14): Show 
c.1204-445_1204-444insTGAGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGAG
others(5): Show 
TGTGTGAGAGAGA
 4 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0122
others(1): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0122
a0001c0001t0003g0150
 4 HG02647.hp1
HG06807.hp1
NA18906.hp1
others(1): Show 
HG02647.hp1
HG06807.hp1
NA18906.hp1
NA19030.hp2
 intron_variant MODIFIER c.1204-445_1204-444i
others(14): Show 
c.1204-445_1204-444insTGTGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(7): Show 
TGTGTGTGAGAGAGA
 2 a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0047
a0001c0001t0003g0048
 2 HG02895.hp2
HG02897.hp2
HG02895.hp2
HG02897.hp2
 intron_variant MODIFIER c.1204-445_1204-444i
others(16): Show 
c.1204-445_1204-444insTGTGTGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(9): Show 
TGTGTGTGAGAGAGAGA
 1 a0001c0005t0003g0183
a0001c0005t0003g0183
 1 NA20129.hp2
NA20129.hp2
 intron_variant MODIFIER c.1204-445_1204-444i
others(18): Show 
c.1204-445_1204-444insTGTGTGAGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(11): Show 
TGTGTGTGTGTGAGAGAGA
 1 a0001c0001t0004g0118
a0001c0001t0004g0118
 1 HG03239.hp1
HG03239.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(20): Show 
c.1204-445_1204-444insTGTGTGTGTGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(13): Show 
TGTGTGTGTGTGAGAGAGAGA
 2 a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0190
a0001c0001t0003g0191
 2 HG02559.hp2
HG02809.hp2
HG02559.hp2
HG02809.hp2
 intron_variant MODIFIER c.1204-445_1204-444i
others(22): Show 
c.1204-445_1204-444insTGTGTGTGTGAGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(15): Show 
TGTGTGTGTGTGAGAGAGAGAGA
 1 a0001c0001t0004g0090
a0001c0001t0004g0090
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(24): Show 
c.1204-445_1204-444insTGTGTGTGTGAGAGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(13): Show 
TGTGTGTGTGTGTGAGAGAGA
 4 a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0114
others(1): Show 
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0114
a0001c0001t0023g0110
 4 HG03491.hp1
HG03540.hp2
HG03579.hp1
others(1): Show 
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(22): Show 
c.1204-445_1204-444insTGTGTGTGTGTGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(15): Show 
TGTGTGTGTGTGTGAGAGAGAGA
 8 a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
others(5): Show 
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0194
a0001c0001t0004g0195
 8 HG02965.hp1
NA18959.hp1
NA18977.hp1
others(5): Show 
HG02965.hp1
NA18959.hp1
NA18977.hp1
NA18979.hp2
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19086.hp2
 intron_variant MODIFIER c.1204-445_1204-444i
others(24): Show 
c.1204-445_1204-444insTGTGTGTGTGTGAGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(15): Show 
TGTGTGTGTGTGTGTGAGAGAGA
 12 a0001c0001t0004g0044
a0001c0001t0004g0104
a0001c0001t0004g0108
others(9): Show 
a0001c0001t0004g0044
a0001c0001t0004g0104
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0117
a0001c0001t0004g0143
a0001c0001t0004g0146
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0021g0144
 12 HG00741.hp1
HG02717.hp1
HG02976.hp2
others(9): Show 
HG00741.hp1
HG02717.hp1
HG02976.hp2
HG03130.hp2
HG03490.hp2
HG03704.hp2
NA18944.hp1
NA18946.hp1
NA18966.hp2
NA18968.hp1
NA18979.hp1
NA20752.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(24): Show 
c.1204-445_1204-444insTGTGTGTGTGTGTGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(17): Show 
TGTGTGTGTGTGTGTGTGAGAGAGA
 2 a0001c0001t0004g0111
a0001c0001t0004g0154
a0001c0001t0004g0111
a0001c0001t0004g0154
 2 HG03195.hp1
NA19081.hp1
HG03195.hp1
NA19081.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(26): Show 
c.1204-445_1204-444insTGTGTGTGTGTGTGTGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(19): Show 
TGTGTGTGTGTGTGTGTGAGAGAGAGA
 1 a0001c0001t0004g0102
a0001c0001t0004g0102
 1 HG04228.hp2
HG04228.hp2
 intron_variant MODIFIER c.1204-445_1204-444i
others(28): Show 
c.1204-445_1204-444insTGTGTGTGTGTGTGTGAGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(17): Show 
TGTGTGTGTGTGTGTGTGTGAGAGA
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(26): Show 
c.1204-445_1204-444insTGTGTGTGTGTGTGTGTGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289408 T
T
 TGTGTGTG
others(19): Show 
TGTGTGTGTGTGTGTGTGTGAGAGAGA
 3 a0001c0001t0004g0107
a0001c0001t0004g0112
a0001c0001t0004g0145
a0001c0001t0004g0107
a0001c0001t0004g0112
a0001c0001t0004g0145
 3 HG00733.hp2
HG02615.hp2
HG02818.hp1
HG00733.hp2
HG02615.hp2
HG02818.hp1
 intron_variant MODIFIER c.1204-445_1204-444i
others(28): Show 
c.1204-445_1204-444insTGTGTGTGTGTGTGTGTGAGAGAGAG
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 INFO_REALIGN_3_PRIME chr2 233289408
chr2:233289509 C
C
 T
T
 2 a0001c0001t0003g0046
a0001c0001t0003g0122
a0001c0001t0003g0046
a0001c0001t0003g0122
 2 HG02647.hp1
NA18906.hp1
HG02647.hp1
NA18906.hp1
 intron_variant MODIFIER c.1204-345C>T
c.1204-345C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289509
chr2:233289537 C
C
 T
T
 1 a0001c0001t0004g0044
a0001c0001t0004g0044
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.1204-317C>T
c.1204-317C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289537
chr2:233289564 A
A
 T
T
 14 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(11): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0198
a0001c0007t0003g0097
 17 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(14): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01891.hp1
HG02683.hp1
HG02818.hp2
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.1204-290A>T
c.1204-290A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289564
chr2:233289617 C
C
 A
A
 1 a0001c0005t0003g0183
a0001c0005t0003g0183
 1 NA20129.hp2
NA20129.hp2
 intron_variant MODIFIER c.1204-237C>A
c.1204-237C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289617
chr2:233289671 C
C
 T
T
 8 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(5): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
 8 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(5): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG03540.hp1
HG06807.hp1
NA18906.hp1
NA19030.hp2
 intron_variant MODIFIER c.1204-183C>T
c.1204-183C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289671
chr2:233289745 A
A
 G
G
 3 a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0021g0144
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0021g0144
 3 HG02717.hp1
HG02818.hp1
HG03130.hp2
HG02717.hp1
HG02818.hp1
HG03130.hp2
 intron_variant MODIFIER c.1204-109A>G
c.1204-109A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289745
chr2:233289828 C
C
 T
T
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.1204-26C>T
c.1204-26C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 12/17 chr2 233289828
chr2:233290145 T
T
 G
G
 1 a0001c0001t0001g0084
a0001c0001t0001g0084
 1 NA18984.hp1
NA18984.hp1
 intron_variant MODIFIER c.1325-103T>G
c.1325-103T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 13/17 chr2 233290145
chr2:233290206 T
T
 A
A
 31 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(28): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
 31 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(28): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1325-42T>A
c.1325-42T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 13/17 chr2 233290206
chr2:233290585 GA
GA
 G
G
 31 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(28): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
 31 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(28): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1430+236delA
c.1430+236delA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 INFO_REALIGN_3_PRIME chr2 233290585
chr2:233290646 GA
GA
 G
G
 197 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(194): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 219 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(216): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1430+295delA
c.1430+295delA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 INFO_REALIGN_3_PRIME chr2 233290646
chr2:233290755 C
C
 T
T
 31 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(28): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
 31 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(28): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1430+402C>T
c.1430+402C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233290755
chr2:233290757 G
G
 A
A
 1 a0001c0001t0001g0064
a0001c0001t0001g0064
 1 NA19079.hp1
NA19079.hp1
 intron_variant MODIFIER c.1430+404G>A
c.1430+404G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233290757
chr2:233290768 A
A
 T
T
 1 a0001c0001t0003g0147
a0001c0001t0003g0147
 1 NA18522.hp1
NA18522.hp1
 intron_variant MODIFIER c.1430+415A>T
c.1430+415A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233290768
chr2:233290815 G
G
 A
A
 144 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
others(141): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0198
a0001c0001t0019g0170
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 162 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(159): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp2
HG00741.hp2
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp2
HG01099.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02615.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02970.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp2
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp2
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03491.hp2
HG03579.hp2
HG03654.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG06807.hp2
NA18939.hp1
NA18940.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18963.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18981.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp2
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1430+462G>A
c.1430+462G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233290815
chr2:233290891 G
G
 T
T
 186 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(183): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 207 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(204): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp2
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp2
HG01099.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp2
NA18522.hp2
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1430+538G>T
c.1430+538G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233290891
chr2:233291119 A
A
 G
G
 7 a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
others(4): Show 
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0020g0151
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 10 HG00621.hp1
HG02074.hp1
HG02083.hp2
others(7): Show 
HG00621.hp1
HG02074.hp1
HG02083.hp2
HG02132.hp1
HG03669.hp2
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 intron_variant MODIFIER c.1430+766A>G
c.1430+766A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233291119
chr2:233291351 C
C
 T
T
 9 a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0003g0181
others(6): Show 
a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0003g0181
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 12 HG02258.hp2
HG02559.hp2
HG02809.hp2
others(9): Show 
HG02258.hp2
HG02559.hp2
HG02809.hp2
HG02965.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
NA18522.hp2
NA19043.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
 intron_variant MODIFIER c.1431-777C>T
c.1431-777C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233291351
chr2:233291366 C
C
 CATCCCAT
others(5): Show 
CATCCCATAATTT
 1 a0002c0002t0002g0246
a0002c0002t0002g0246
 1 HG03239.hp2
HG03239.hp2
 intron_variant MODIFIER c.1431-761_1431-750d
others(14): Show 
c.1431-761_1431-750dupATCCCATAATTT
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 INFO_REALIGN_3_PRIME chr2 233291366
chr2:233291501 C
C
 T
T
 6 a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
others(3): Show 
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
 9 HG00621.hp1
HG02083.hp2
HG02132.hp1
others(6): Show 
HG00621.hp1
HG02083.hp2
HG02132.hp1
HG03669.hp2
NA18974.hp2
NA18991.hp2
NA19001.hp2
NA19058.hp2
NA19082.hp2
 intron_variant MODIFIER c.1431-627C>T
c.1431-627C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233291501
chr2:233291607 A
A
 G
G
 11 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(8): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0141
a0001c0001t0003g0188
a0001c0001t0003g0198
 14 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(11): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG02683.hp1
HG02818.hp2
HG02970.hp1
HG03139.hp1
HG03710.hp1
NA18940.hp1
NA18968.hp2
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.1431-521A>G
c.1431-521A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233291607
chr2:233292107 C
C
 G
G
 7 a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0003g0181
others(4): Show 
a0001c0001t0003g0007
a0001c0001t0003g0171
a0001c0001t0003g0181
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 10 HG02258.hp2
HG02965.hp2
HG03453.hp2
others(7): Show 
HG02258.hp2
HG02965.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
NA18522.hp2
NA19043.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
 intron_variant MODIFIER c.1431-21C>G
c.1431-21C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 14/17 chr2 233292107
chr2:233292331 TA
TA
 T
T
 51 a0001c0001t0003g0007
a0001c0001t0003g0045
a0001c0001t0003g0046
others(48): Show 
a0001c0001t0003g0007
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
a0001c0001t0003g0171
a0001c0001t0003g0181
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
 55 HG00733.hp2
HG00741.hp1
HG01109.hp1
others(52): Show 
HG00733.hp2
HG00741.hp1
HG01109.hp1
HG02055.hp1
HG02258.hp2
HG02559.hp2
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp2
HG02818.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp2
HG03098.hp1
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
HG06807.hp1
NA18522.hp2
NA18906.hp1
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19081.hp1
NA19086.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20752.hp1
 intron_variant MODIFIER c.1581-54delA
c.1581-54delA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 15/17 INFO_REALIGN_3_PRIME chr2 233292331
chr2:233292353 T
T
 A
A
 31 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(28): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
 31 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(28): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1581-34T>A
c.1581-34T>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 15/17 chr2 233292353
chr2:233292484 G
G
 C
C
 1 a0002c0002t0015g0202
a0002c0002t0015g0202
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.1628+50G>C
c.1628+50G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233292484
chr2:233292540 A
A
 G
G
 11 a0001c0001t0003g0009
a0001c0001t0003g0045
a0001c0001t0003g0046
others(8): Show 
a0001c0001t0003g0009
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0115
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0147
a0001c0001t0003g0150
 13 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(10): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02976.hp1
HG03130.hp1
HG03453.hp1
HG03540.hp1
HG06807.hp1
NA18522.hp1
NA18906.hp1
NA19030.hp2
 intron_variant MODIFIER c.1628+106A>G
c.1628+106A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233292540
chr2:233292684 C
C
 T
T
 1 a0002c0002t0002g0219
a0002c0002t0002g0219
 1 HG02896.hp2
HG02896.hp2
 intron_variant MODIFIER c.1628+250C>T
c.1628+250C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233292684
chr2:233292772 G
G
 A
A
 1 a0001c0001t0001g0070
a0001c0001t0001g0070
 1 NA18940.hp2
NA18940.hp2
 intron_variant MODIFIER c.1628+338G>A
c.1628+338G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233292772
chr2:233292981 C
C
 T
T
 1 a0002c0002t0002g0221
a0002c0002t0002g0221
 1 HG02970.hp2
HG02970.hp2
 intron_variant MODIFIER c.1629-275C>T
c.1629-275C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233292981
chr2:233293011 A
A
 G
G
 31 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(28): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
 31 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(28): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1629-245A>G
c.1629-245A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233293011
chr2:233293012 T
T
 C
C
 26 a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
others(23): Show 
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0019g0170
a0005c0006t0003g0162
 28 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(25): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG03017.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA20905.hp2
 intron_variant MODIFIER c.1629-244T>C
c.1629-244T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233293012
chr2:233293054 G
G
 C
C
 36 a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
others(33): Show 
a0001c0001t0003g0007
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0019g0170
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0005c0006t0003g0162
 41 HG00423.hp2
HG01081.hp2
HG01168.hp2
others(38): Show 
HG00423.hp2
HG01081.hp2
HG01168.hp2
HG01255.hp2
HG01516.hp1
HG01517.hp1
HG01943.hp1
HG01978.hp1
HG02080.hp1
HG02135.hp1
HG02258.hp2
HG02559.hp2
HG02809.hp2
HG02965.hp2
HG03017.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03704.hp1
HG04115.hp1
HG04184.hp1
NA18522.hp2
NA18947.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18968.hp2
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19001.hp1
NA19004.hp1
NA19043.hp2
NA19058.hp1
NA19078.hp1
NA19087.hp2
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp1
NA20905.hp2
 intron_variant MODIFIER c.1629-202G>C
c.1629-202G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233293054
chr2:233293068 C
C
 A
A
 1 a0001c0001t0004g0114
a0001c0001t0004g0114
 1 HG03540.hp2
HG03540.hp2
 intron_variant MODIFIER c.1629-188C>A
c.1629-188C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233293068
chr2:233293121 A
A
 G
G
 16 a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
others(13): Show 
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0141
a0001c0001t0003g0188
a0001c0001t0003g0198
a0001c0007t0003g0097
 19 HG00140.hp2
HG00280.hp1
HG00323.hp2
others(16): Show 
HG00140.hp2
HG00280.hp1
HG00323.hp2
HG00738.hp2
HG01261.hp1
HG01891.hp1
HG02486.hp2
HG02683.hp1
HG02818.hp2
HG02886.hp1
HG02970.hp1
HG03139.hp1
HG03225.hp1
HG03710.hp1
HG04199.hp1
NA18940.hp1
NA18968.hp2
NA19063.hp2
NA21309.hp2
 intron_variant MODIFIER c.1629-135A>G
c.1629-135A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 16/17 chr2 233293121
chr2:233293390 G
G
 A
A
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.1730+33G>A
c.1730+33G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293390
chr2:233293427 T
T
 G
G
 1 a0001c0001t0003g0121
a0001c0001t0003g0121
 1 HG03540.hp1
HG03540.hp1
 intron_variant MODIFIER c.1730+70T>G
c.1730+70T>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293427
chr2:233293430 G
G
 A
A
 1 a0001c0001t0011g0014
a0001c0001t0011g0014
 2 HG02055.hp1
HG03098.hp1
HG02055.hp1
HG03098.hp1
 intron_variant MODIFIER c.1730+73G>A
c.1730+73G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293430
chr2:233293446 G
G
 A
A
 1 a0002c0002t0006g0273
a0002c0002t0006g0273
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1730+89G>A
c.1730+89G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293446
chr2:233293544 T
T
 C
C
 31 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(28): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0021g0144
a0001c0001t0023g0110
 31 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(28): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1730+187T>C
c.1730+187T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293544
chr2:233293628 T
T
 TC
TC
 288 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0004
others(285): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0008
a0001c0001t0001g0010
a0001c0001t0001g0015
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0021
a0001c0001t0001g0022
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0062
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0085
a0001c0001t0001g0088
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0001g0132
a0001c0001t0001g0134
a0001c0001t0001g0135
a0001c0001t0001g0136
a0001c0001t0001g0137
a0001c0001t0001g0139
a0001c0001t0001g0152
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0003g0007
a0001c0001t0003g0009
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0055
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0115
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0147
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0174
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0007g0003
a0001c0001t0007g0148
a0001c0001t0007g0156
a0001c0001t0008g0039
a0001c0001t0008g0040
a0001c0001t0008g0103
a0001c0001t0008g0113
a0001c0001t0009g0060
a0001c0001t0009g0072
a0001c0001t0009g0133
a0001c0001t0011g0014
a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0017g0002
a0001c0001t0019g0170
a0001c0001t0020g0151
a0001c0001t0021g0144
a0001c0001t0022g0056
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0003c0003t0007g0003
a0003c0003t0007g0149
a0003c0003t0007g0157
a0004c0009t0002g0266
a0005c0006t0003g0162
 353 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(350): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00423.hp1
HG00423.hp2
HG00558.hp1
HG00558.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01256.hp2
HG01257.hp1
HG01257.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01358.hp2
HG01496.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02071.hp1
HG02071.hp2
HG02074.hp1
HG02074.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02129.hp1
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02155.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02300.hp2
HG02486.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18906.hp1
NA18906.hp2
NA18939.hp1
NA18939.hp2
NA18940.hp1
NA18940.hp2
NA18944.hp1
NA18944.hp2
NA18946.hp1
NA18946.hp2
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18953.hp1
NA18953.hp2
NA18954.hp1
NA18954.hp2
NA18956.hp1
NA18956.hp2
NA18957.hp1
NA18957.hp2
NA18959.hp1
NA18959.hp2
NA18963.hp1
NA18963.hp2
NA18966.hp1
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18972.hp1
NA18972.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18977.hp2
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18982.hp1
NA18982.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18985.hp1
NA18985.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA18999.hp1
NA18999.hp2
NA19000.hp1
NA19000.hp2
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19004.hp2
NA19005.hp1
NA19005.hp2
NA19010.hp1
NA19010.hp2
NA19011.hp1
NA19011.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19056.hp1
NA19056.hp2
NA19058.hp1
NA19058.hp2
NA19060.hp1
NA19060.hp2
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19070.hp1
NA19070.hp2
NA19072.hp1
NA19072.hp2
NA19077.hp1
NA19077.hp2
NA19078.hp1
NA19078.hp2
NA19079.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp1
NA19082.hp2
NA19086.hp1
NA19086.hp2
NA19087.hp1
NA19087.hp2
NA19088.hp1
NA19088.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp1
NA20129.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20752.hp2
NA20905.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1730+273dupC
c.1730+273dupC
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 INFO_REALIGN_3_PRIME chr2 233293628
chr2:233293675 C
C
 T
T
 197 a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
others(194): Show 
a0001c0001t0003g0007
a0001c0001t0003g0011
a0001c0001t0003g0016
a0001c0001t0003g0019
a0001c0001t0003g0020
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0091
a0001c0001t0003g0093
a0001c0001t0003g0094
a0001c0001t0003g0095
a0001c0001t0003g0096
a0001c0001t0003g0098
a0001c0001t0003g0099
a0001c0001t0003g0100
a0001c0001t0003g0101
a0001c0001t0003g0119
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0141
a0001c0001t0003g0150
a0001c0001t0003g0153
a0001c0001t0003g0158
a0001c0001t0003g0159
a0001c0001t0003g0160
a0001c0001t0003g0161
a0001c0001t0003g0163
a0001c0001t0003g0164
a0001c0001t0003g0165
a0001c0001t0003g0166
a0001c0001t0003g0167
a0001c0001t0003g0168
a0001c0001t0003g0169
a0001c0001t0003g0171
a0001c0001t0003g0175
a0001c0001t0003g0176
a0001c0001t0003g0177
a0001c0001t0003g0178
a0001c0001t0003g0179
a0001c0001t0003g0180
a0001c0001t0003g0181
a0001c0001t0003g0185
a0001c0001t0003g0186
a0001c0001t0003g0187
a0001c0001t0003g0188
a0001c0001t0003g0190
a0001c0001t0003g0191
a0001c0001t0003g0198
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0004g0193
a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0011g0014
a0001c0001t0019g0170
a0001c0001t0021g0144
a0001c0001t0023g0110
a0001c0005t0003g0092
a0001c0005t0003g0182
a0001c0005t0003g0183
a0001c0005t0003g0184
a0001c0007t0003g0097
a0002c0002t0002g0023
a0002c0002t0002g0024
a0002c0002t0002g0026
a0002c0002t0002g0027
a0002c0002t0002g0028
a0002c0002t0002g0029
a0002c0002t0002g0030
a0002c0002t0002g0032
a0002c0002t0002g0033
a0002c0002t0002g0034
a0002c0002t0002g0199
a0002c0002t0002g0200
a0002c0002t0002g0201
a0002c0002t0002g0210
a0002c0002t0002g0213
a0002c0002t0002g0215
a0002c0002t0002g0216
a0002c0002t0002g0218
a0002c0002t0002g0219
a0002c0002t0002g0220
a0002c0002t0002g0221
a0002c0002t0002g0222
a0002c0002t0002g0223
a0002c0002t0002g0224
a0002c0002t0002g0225
a0002c0002t0002g0226
a0002c0002t0002g0227
a0002c0002t0002g0228
a0002c0002t0002g0229
a0002c0002t0002g0231
a0002c0002t0002g0232
a0002c0002t0002g0233
a0002c0002t0002g0234
a0002c0002t0002g0236
a0002c0002t0002g0237
a0002c0002t0002g0238
a0002c0002t0002g0239
a0002c0002t0002g0242
a0002c0002t0002g0243
a0002c0002t0002g0244
a0002c0002t0002g0245
a0002c0002t0002g0246
a0002c0002t0002g0247
a0002c0002t0002g0249
a0002c0002t0002g0250
a0002c0002t0002g0251
a0002c0002t0002g0258
a0002c0002t0002g0261
a0002c0002t0002g0262
a0002c0002t0002g0263
a0002c0002t0002g0264
a0002c0002t0002g0267
a0002c0002t0002g0268
a0002c0002t0002g0269
a0002c0002t0002g0270
a0002c0002t0002g0271
a0002c0002t0002g0276
a0002c0002t0002g0280
a0002c0002t0002g0281
a0002c0002t0005g0012
a0002c0002t0005g0013
a0002c0002t0005g0025
a0002c0002t0005g0029
a0002c0002t0005g0030
a0002c0002t0005g0031
a0002c0002t0005g0035
a0002c0002t0005g0211
a0002c0002t0005g0212
a0002c0002t0005g0214
a0002c0002t0005g0230
a0002c0002t0005g0235
a0002c0002t0005g0240
a0002c0002t0005g0241
a0002c0002t0005g0248
a0002c0002t0005g0256
a0002c0002t0005g0257
a0002c0002t0005g0259
a0002c0002t0005g0260
a0002c0002t0005g0277
a0002c0002t0005g0278
a0002c0002t0005g0279
a0002c0002t0006g0203
a0002c0002t0006g0252
a0002c0002t0006g0253
a0002c0002t0006g0254
a0002c0002t0006g0272
a0002c0002t0006g0273
a0002c0002t0006g0274
a0002c0002t0006g0275
a0002c0002t0006g0282
a0002c0002t0010g0217
a0002c0002t0010g0283
a0002c0002t0013g0265
a0002c0002t0014g0255
a0002c0002t0015g0202
a0002c0002t0016g0284
a0002c0002t0018g0189
a0002c0004t0002g0204
a0002c0004t0002g0205
a0002c0004t0002g0206
a0002c0004t0002g0207
a0002c0004t0002g0208
a0002c0004t0002g0209
a0002c0008t0005g0031
a0004c0009t0002g0266
a0005c0006t0003g0162
 220 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(217): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00558.hp1
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01109.hp1
HG01109.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01257.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01978.hp1
HG01978.hp2
HG02040.hp2
HG02055.hp1
HG02071.hp2
HG02080.hp1
HG02083.hp1
HG02129.hp2
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp2
HG02300.hp1
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02896.hp2
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03491.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18906.hp1
NA18939.hp1
NA18940.hp1
NA18944.hp1
NA18946.hp1
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18950.hp2
NA18951.hp1
NA18952.hp1
NA18953.hp1
NA18954.hp2
NA18956.hp1
NA18957.hp1
NA18959.hp1
NA18963.hp2
NA18966.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp1
NA18972.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18983.hp2
NA18985.hp1
NA18986.hp1
NA18987.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA19000.hp1
NA19001.hp1
NA19004.hp1
NA19005.hp2
NA19010.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19056.hp1
NA19058.hp1
NA19060.hp2
NA19063.hp2
NA19065.hp2
NA19070.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19079.hp2
NA19081.hp1
NA19081.hp2
NA19086.hp2
NA19087.hp2
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20752.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1730+318C>T
c.1730+318C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293675
chr2:233293772 A
A
 C
C
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1730+415A>C
c.1730+415A>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293772
chr2:233293777 A
A
 T
T
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1730+420A>T
c.1730+420A>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293777
chr2:233293781 G
G
 C
C
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1730+424G>C
c.1730+424G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293781
chr2:233293787 C
C
 T
T
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1730+430C>T
c.1730+430C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293787
chr2:233293788 C
C
 T
T
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1730+431C>T
c.1730+431C>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293788
chr2:233293792 A
A
 G
G
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1730+435A>G
c.1730+435A>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293792
chr2:233293796 C
C
 A
A
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1730+439C>A
c.1730+439C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293796
chr2:233293803 T
T
 C
C
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1730+446T>C
c.1730+446T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293803
chr2:233293820 C
C
 A
A
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1731-437C>A
c.1731-437C>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293820
chr2:233293836 G
G
 A
A
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1731-421G>A
c.1731-421G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293836
chr2:233293855 C
C
 G
G
 1 a0002c0002t0002g0216
a0002c0002t0002g0216
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.1731-402C>G
c.1731-402C>G
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293855
chr2:233293944 T
T
 C
C
 2 a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0047
a0001c0001t0003g0048
 2 HG02895.hp2
HG02897.hp2
HG02895.hp2
HG02897.hp2
 intron_variant MODIFIER c.1731-313T>C
c.1731-313T>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233293944
chr2:233294003 G
G
 GATAAGGC
others(35): Show 
GATAAGGCCTGACTGCCAGAGGGGCCAAACTCCCTTCATCCCA
 1 a0002c0002t0010g0283
a0002c0002t0010g0283
 1 HG03209.hp2
HG03209.hp2
 intron_variant MODIFIER c.1731-253_1731-212d
others(44): Show 
c.1731-253_1731-212dupATAAGGCCTGACTGCCAGAGGGGCCAAA
CTCCCTTCATCCCA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 INFO_REALIGN_3_PRIME chr2 233294003
chr2:233294008 G
G
 A
A
 2 a0001c0001t0004g0194
a0001c0001t0004g0195
a0001c0001t0004g0194
a0001c0001t0004g0195
 2 HG02965.hp1
NA19086.hp2
HG02965.hp1
NA19086.hp2
 intron_variant MODIFIER c.1731-249G>A
c.1731-249G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233294008
chr2:233294008 G
G
 T
T
 3 a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0119
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0119
 3 HG02886.hp1
HG02895.hp2
HG02897.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp2
 intron_variant MODIFIER c.1731-249G>T
c.1731-249G>T
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233294008
chr2:233294052 CTTAA
CTTAA
 C
C
 8 a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
others(5): Show 
a0001c0001t0003g0045
a0001c0001t0003g0046
a0001c0001t0003g0047
a0001c0001t0003g0048
a0001c0001t0003g0120
a0001c0001t0003g0121
a0001c0001t0003g0122
a0001c0001t0003g0150
 8 HG01109.hp1
HG02647.hp1
HG02895.hp2
others(5): Show 
HG01109.hp1
HG02647.hp1
HG02895.hp2
HG02897.hp2
HG03540.hp1
HG06807.hp1
NA18906.hp1
NA19030.hp2
 intron_variant MODIFIER c.1731-200_1731-197d
others(6): Show 
c.1731-200_1731-197delTTAA
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 INFO_REALIGN_3_PRIME chr2 233294052
chr2:233294118 G
G
 A
A
 2 a0001c0001t0012g0116
a0001c0001t0012g0142
a0001c0001t0012g0116
a0001c0001t0012g0142
 2 HG02145.hp2
HG02922.hp2
HG02145.hp2
HG02922.hp2
 intron_variant MODIFIER c.1731-139G>A
c.1731-139G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233294118
chr2:233294120 G
G
 A
A
 30 a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
others(27): Show 
a0001c0001t0004g0044
a0001c0001t0004g0061
a0001c0001t0004g0086
a0001c0001t0004g0087
a0001c0001t0004g0089
a0001c0001t0004g0090
a0001c0001t0004g0102
a0001c0001t0004g0104
a0001c0001t0004g0105
a0001c0001t0004g0106
a0001c0001t0004g0107
a0001c0001t0004g0108
a0001c0001t0004g0109
a0001c0001t0004g0111
a0001c0001t0004g0112
a0001c0001t0004g0114
a0001c0001t0004g0117
a0001c0001t0004g0118
a0001c0001t0004g0138
a0001c0001t0004g0140
a0001c0001t0004g0143
a0001c0001t0004g0145
a0001c0001t0004g0146
a0001c0001t0004g0154
a0001c0001t0004g0155
a0001c0001t0004g0172
a0001c0001t0004g0173
a0001c0001t0004g0192
a0001c0001t0021g0144
a0001c0001t0023g0110
 30 HG00733.hp2
HG00741.hp1
HG02615.hp2
others(27): Show 
HG00733.hp2
HG00741.hp1
HG02615.hp2
HG02717.hp1
HG02818.hp1
HG02976.hp2
HG03130.hp2
HG03195.hp1
HG03239.hp1
HG03490.hp2
HG03491.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03704.hp2
HG04228.hp2
NA18944.hp1
NA18946.hp1
NA18959.hp1
NA18966.hp2
NA18968.hp1
NA18974.hp1
NA18977.hp1
NA18979.hp1
NA18979.hp2
NA18985.hp1
NA18989.hp1
NA19056.hp1
NA19081.hp1
NA20752.hp1
 intron_variant MODIFIER c.1731-137G>A
c.1731-137G>A
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233294120
chr2:233294241 G
G
 C
C
 1 a0002c0002t0015g0202
a0002c0002t0015g0202
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.1731-16G>C
c.1731-16G>C
ATG16L1 ENSG00000085978.22 transcript ENST00000392017.9 protein_coding 17/17 chr2 233294241

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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