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geneid	30813
ensemblid	ENSG00000100987.15
hgncid	12723
symbol	VSX1
name	visual system homeobox 1
refseq_nuc	NM_014588.6
refseq_prot	NP_055403.2
ensembl_nuc	ENST00000376709.9
ensembl_prot	ENSP00000365899.3
mane_status	MANE Select
chr	chr20
start	25075463
end	25082141
strand	-
ver	v1.2
region	chr20:25075463-25082141
region5000	chr20:25070463-25087141
regionname0	VSX1_chr20_25075463_25082141
regionname5000	VSX1_chr20_25070463_25087141

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	365	330	77	66	125	14	46	98	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0002	0/0	365	19	19	0	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0003	0/0	365	8	4	4	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0004	0/0	365	4	0	0	4	0	0	3	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0005	0/0	365	3	0	0	3	0	0	3	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0006	0/0	365	1	0	0	1	0	0	1	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0007	0/0	365	1	0	0	1	0	0	1	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0008	0/0	365	1	0	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0009	0/0	365	1	0	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1098	247	41	44	121	9	30	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0002	0/0	1098	75	31	21	3	4	16	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0003	0/0	1098	19	19	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0004	0/0	1098	8	4	4	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0005	0/0	1098	5	5	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0006	0/0	1098	4	0	0	4	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0007	0/0	1098	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0008	0/0	1098	2	0	1	0	1	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0009	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0010	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0011	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0012	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
c0013	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	844	316	65	59	132	14	44	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
t0002	0/0	843	28	27	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
t0003	0/0	844	8	0	7	0	0	1	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
t0004	0/0	843	7	7	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
t0005	0/0	844	4	0	3	0	0	1	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
t0006	0/0	844	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
t0007	0/0	844	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
t0008	0/0	843	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	130	34	16	54	4	21	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0002	0/0	67	1	6	54	0	6	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0003	0/0	47	11	15	3	4	14	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0004	1/0	15	1	8	0	5	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0005	0/0	13	13	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0006	0/0	9	9	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0007	0/0	8	4	4	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0008	0/0	7	7	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0009	0/0	6	0	5	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0010	0/0	5	2	3	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0011	0/0	4	0	3	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0012	0/0	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0013	0/0	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0014	0/0	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0015	0/0	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0016	0/0	2	2	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0017	0/0	2	1	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0018	0/0	2	0	0	2	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0019	0/0	2	0	2	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0020	0/0	2	2	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0021	0/0	2	2	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0022	0/0	2	2	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0023	0/0	2	0	1	0	1	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0024	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0025	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0026	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0027	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0028	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0029	0/0	1	0	0	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0030	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0031	0/0	1	0	0	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0032	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0033	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0034	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0035	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0036	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0037	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0038	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0039	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0040	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0041	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0042	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0043	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0044	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0045	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0046	0/0	1	0	0	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0047	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0048	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0049	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0050	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0051	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
g0052	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1098	247	41	44	121	9	30	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0002	0/0	1098	75	31	21	3	4	16	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0005	0/0	1098	5	5	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0008	0/0	1098	2	0	1	0	1	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0010	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0002c0003	0/0	1098	19	19	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0003c0004	0/0	1098	8	4	4	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0004c0006	0/0	1098	4	0	0	4	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0005c0007	0/0	1098	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0006c0013	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0007c0011	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0008c0012	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0009c0009	0/0	1098	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1941	231	41	34	117	9	28	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0001t0003	0/0	1941	8	0	7	0	0	1	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0001t0005	0/0	1941	4	0	3	0	0	1	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0001t0006	0/0	1941	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0001t0007	0/0	1941	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0002t0001	0/0	1941	58	15	20	3	4	16	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0002t0002	0/0	1940	16	15	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0002t0008	0/0	1940	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0005t0001	0/0	1941	5	5	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0008t0001	0/0	1941	2	0	1	0	1	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0001c0010t0001	0/0	1941	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0002c0003t0002	0/0	1940	12	12	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0002c0003t0004	0/0	1940	7	7	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0003c0004t0001	0/0	1941	8	4	4	0	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0004c0006t0001	0/0	1941	4	0	0	4	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0005c0007t0001	0/0	1941	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0006c0013t0001	0/0	1941	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0007c0011t0001	0/0	1941	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0008c0012t0001	0/0	1941	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141
a0009c0009t0001	0/0	1941	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	copy fasta	chr20	25070463	25087141

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	130	34	16	54	4	21	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0002	0/0	67	1	6	54	0	6	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0004	1/0	15	1	8	0	5	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0012	0/0	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0018	0/0	2	0	0	2	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0020	0/0	2	2	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0034	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0037	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0038	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0039	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0040	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0041	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0043	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0045	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0046	0/0	1	0	0	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0049	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0001g0050	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0003g0009	0/0	6	0	5	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0003g0019	0/0	2	0	2	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0005g0011	0/0	4	0	3	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0006g0013	0/0	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0001t0007g0035	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0001g0003	0/0	47	11	15	3	4	14	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0001g0010	0/0	5	2	3	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0001g0026	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0001g0027	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0001g0028	0/0	1	0	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0001g0029	0/0	1	0	0	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0001g0030	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0001g0031	0/0	1	0	0	0	0	1	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0002g0005	0/0	13	13	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0002g0017	0/0	2	1	1	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0002g0033	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0002t0008g0032	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0005t0001g0021	0/0	2	2	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0005t0001g0022	0/0	2	2	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0005t0001g0051	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0008t0001g0023	0/0	2	0	1	0	1	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0001c0010t0001g0036	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0002c0003t0002g0006	0/0	9	9	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0002c0003t0002g0016	0/0	2	2	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0002c0003t0002g0025	0/0	1	1	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0002c0003t0004g0008	0/0	7	7	0	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0003c0004t0001g0007	0/0	8	4	4	0	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0004c0006t0001g0014	0/0	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0004c0006t0001g0047	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0005c0007t0001g0015	0/0	3	0	0	3	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0006c0013t0001g0052	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0007c0011t0001g0042	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0008c0012t0001g0044	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
a0009c0009t0001g0024	0/0	1	0	0	1	0	0	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00099	hp2	a0001	c0002	t0001	g0003	EUR	GBR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00140	hp2	a0001	c0008	t0001	g0023	EUR	GBR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00280	hp1	a0001	c0001	t0001	g0004	EUR	FIN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00323	hp1	a0001	c0002	t0001	g0003	EUR	FIN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00323	hp2	a0001	c0001	t0001	g0004	EUR	FIN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00408	hp1	a0001	c0001	t0001	g0002	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00408	hp2	a0001	c0001	t0001	g0002	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00423	hp1	a0001	c0001	t0001	g0012	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00423	hp2	a0001	c0001	t0001	g0002	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00544	hp2	a0001	c0001	t0001	g0018	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00558	hp1	a0009	c0009	t0001	g0024	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00558	hp2	a0001	c0001	t0001	g0002	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00597	hp2	a0004	c0006	t0001	g0014	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00621	hp1	a0001	c0001	t0006	g0013	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00621	hp2	a0001	c0001	t0001	g0002	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00639	hp1	a0001	c0001	t0001	g0002	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00642	hp1	a0001	c0001	t0001	g0004	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00642	hp2	a0001	c0001	t0003	g0019	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00673	hp1	a0001	c0001	t0001	g0002	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00733	hp2	a0001	c0002	t0001	g0003	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00735	hp1	a0001	c0002	t0001	g0003	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00735	hp2	a0001	c0002	t0001	g0010	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00738	hp1	a0001	c0002	t0001	g0003	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00738	hp2	a0003	c0004	t0001	g0007	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG00741	hp2	a0001	c0002	t0002	g0017	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01069	hp1	a0001	c0001	t0005	g0011	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01069	hp2	a0001	c0001	t0001	g0004	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01070	hp2	a0001	c0001	t0001	g0002	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01071	hp1	a0001	c0001	t0001	g0004	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01071	hp2	a0001	c0001	t0001	g0002	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01081	hp1	a0001	c0002	t0001	g0003	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01081	hp2	a0001	c0001	t0001	g0038	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01099	hp2	a0001	c0001	t0001	g0004	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01106	hp1	a0001	c0001	t0001	g0004	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01106	hp2	a0001	c0002	t0001	g0003	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01167	hp2	a0003	c0004	t0001	g0007	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01168	hp2	a0001	c0001	t0003	g0009	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01169	hp1	a0003	c0004	t0001	g0007	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01169	hp2	a0001	c0001	t0003	g0009	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01175	hp1	a0001	c0001	t0003	g0009	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01175	hp2	a0001	c0002	t0001	g0028	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01243	hp2	a0003	c0004	t0001	g0007	AMR	PUR	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01255	hp1	a0001	c0002	t0001	g0003	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01255	hp2	a0001	c0001	t0001	g0043	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01256	hp1	a0001	c0008	t0001	g0023	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01256	hp2	a0001	c0001	t0001	g0004	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01261	hp1	a0001	c0001	t0001	g0050	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01261	hp2	a0001	c0002	t0001	g0003	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01346	hp1	a0001	c0002	t0001	g0003	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01346	hp2	a0001	c0001	t0005	g0011	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01361	hp1	a0001	c0001	t0003	g0009	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01433	hp1	a0001	c0001	t0001	g0004	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01496	hp2	a0001	c0002	t0001	g0003	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01515	hp1	a0001	c0001	t0001	g0004	EUR	IBS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01515	hp2	a0001	c0001	t0001	g0004	EUR	IBS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01517	hp1	a0001	c0001	t0001	g0004	EUR	IBS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01517	hp2	a0001	c0002	t0001	g0003	EUR	IBS	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01884	hp2	a0001	c0002	t0002	g0017	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01891	hp1	a0001	c0001	t0001	g0020	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01891	hp2	a0001	c0005	t0001	g0021	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01928	hp1	a0001	c0002	t0001	g0026	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01928	hp2	a0001	c0002	t0001	g0003	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01934	hp1	a0001	c0002	t0001	g0010	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01934	hp2	a0001	c0001	t0001	g0004	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01975	hp1	a0001	c0002	t0001	g0003	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01975	hp2	a0001	c0001	t0001	g0037	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01993	hp2	a0001	c0001	t0003	g0009	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02004	hp2	a0001	c0001	t0001	g0002	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02040	hp2	a0001	c0001	t0001	g0002	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02056	hp1	a0001	c0001	t0001	g0002	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02056	hp2	a0001	c0001	t0001	g0002	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02071	hp1	a0001	c0001	t0001	g0012	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02071	hp2	a0001	c0001	t0001	g0002	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02083	hp1	a0001	c0001	t0001	g0049	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02145	hp1	a0002	c0003	t0002	g0016	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02148	hp1	a0001	c0002	t0001	g0003	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02148	hp2	a0001	c0002	t0001	g0010	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02155	hp1	a0001	c0001	t0007	g0035	EAS	CDX	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02165	hp2	a0001	c0001	t0001	g0002	EAS	CDX	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02257	hp2	a0002	c0003	t0002	g0006	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02258	hp1	a0002	c0003	t0002	g0006	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02258	hp2	a0001	c0002	t0002	g0005	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02273	hp1	a0001	c0001	t0001	g0002	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02273	hp2	a0001	c0002	t0001	g0003	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02280	hp1	a0001	c0001	t0001	g0045	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02300	hp1	a0001	c0002	t0001	g0003	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02300	hp2	a0001	c0001	t0005	g0011	AMR	PEL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02451	hp2	a0003	c0004	t0001	g0007	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02523	hp1	a0001	c0001	t0001	g0002	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02523	hp2	a0008	c0012	t0001	g0044	EAS	KHV	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02572	hp2	a0001	c0005	t0001	g0022	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02602	hp1	a0001	c0002	t0001	g0003	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02602	hp2	a0001	c0001	t0001	g0002	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02615	hp1	a0001	c0002	t0001	g0003	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02622	hp1	a0001	c0001	t0001	g0020	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02630	hp1	a0002	c0003	t0002	g0006	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02647	hp1	a0001	c0002	t0002	g0005	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02647	hp2	a0001	c0002	t0001	g0003	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02683	hp1	a0001	c0002	t0001	g0003	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02698	hp2	a0001	c0001	t0001	g0002	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02723	hp2	a0003	c0004	t0001	g0007	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02735	hp1	a0001	c0001	t0001	g0002	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02735	hp2	a0001	c0001	t0001	g0046	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02809	hp2	a0001	c0002	t0008	g0032	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02818	hp2	a0001	c0002	t0002	g0005	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02886	hp1	a0001	c0002	t0001	g0010	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02886	hp2	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02895	hp2	a0001	c0002	t0001	g0030	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02896	hp1	a0002	c0003	t0004	g0008	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02896	hp2	a0001	c0002	t0002	g0005	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02897	hp1	a0002	c0003	t0004	g0008	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02922	hp1	a0002	c0003	t0002	g0006	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02965	hp1	a0001	c0005	t0001	g0051	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02970	hp2	a0001	c0002	t0002	g0005	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02976	hp1	a0002	c0003	t0002	g0006	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03017	hp1	a0001	c0002	t0001	g0003	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03041	hp1	a0003	c0004	t0001	g0007	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03098	hp1	a0001	c0002	t0002	g0005	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03098	hp2	a0001	c0002	t0001	g0027	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03130	hp1	a0002	c0003	t0002	g0006	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03130	hp2	a0002	c0003	t0004	g0008	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03139	hp1	a0002	c0003	t0002	g0006	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03195	hp1	a0001	c0005	t0001	g0021	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03195	hp2	a0001	c0002	t0002	g0005	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03209	hp1	a0001	c0002	t0001	g0003	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03209	hp2	a0001	c0001	t0001	g0001	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03225	hp2	a0001	c0002	t0002	g0005	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03239	hp1	a0001	c0002	t0001	g0003	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03453	hp1	a0001	c0002	t0002	g0005	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03453	hp2	a0001	c0005	t0001	g0022	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03486	hp2	a0001	c0002	t0002	g0005	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03490	hp1	a0001	c0002	t0001	g0003	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03490	hp2	a0001	c0001	t0001	g0002	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03492	hp2	a0001	c0002	t0001	g0003	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03516	hp1	a0001	c0002	t0002	g0033	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03540	hp1	a0001	c0002	t0001	g0003	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03540	hp2	a0001	c0001	t0001	g0039	AFR	GWD	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03579	hp1	a0001	c0002	t0001	g0003	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03579	hp2	a0001	c0001	t0001	g0001	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03654	hp1	a0001	c0002	t0001	g0003	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03654	hp2	a0001	c0001	t0001	g0002	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03688	hp1	a0001	c0002	t0001	g0031	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03688	hp2	a0001	c0002	t0001	g0003	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03704	hp1	a0001	c0001	t0005	g0011	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03710	hp1	a0001	c0002	t0001	g0029	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03710	hp2	a0001	c0002	t0001	g0003	SAS	PJL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03831	hp2	a0001	c0002	t0001	g0003	SAS	BEB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04184	hp1	a0001	c0001	t0003	g0009	SAS	BEB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04184	hp2	a0001	c0002	t0001	g0003	SAS	BEB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04199	hp1	a0001	c0002	t0001	g0003	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04204	hp1	a0001	c0002	t0001	g0003	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04228	hp1	a0001	c0002	t0001	g0003	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG04228	hp2	a0001	c0001	t0001	g0002	SAS	STU	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18522	hp1	a0002	c0003	t0002	g0025	AFR	YRI	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18522	hp2	a0001	c0002	t0001	g0003	AFR	YRI	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18906	hp1	a0001	c0001	t0001	g0048	AFR	YRI	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18906	hp2	a0001	c0002	t0002	g0005	AFR	YRI	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18940	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18941	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18943	hp1	a0001	c0002	t0001	g0003	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18944	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18945	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18946	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18947	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18948	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18949	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18949	hp2	a0001	c0001	t0001	g0040	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18961	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18962	hp2	a0001	c0002	t0001	g0003	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18965	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18965	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18966	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18969	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18970	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18971	hp2	a0004	c0006	t0001	g0014	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18976	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18976	hp2	a0007	c0011	t0001	g0042	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18978	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18978	hp2	a0001	c0001	t0006	g0013	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18984	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18986	hp1	a0005	c0007	t0001	g0015	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18986	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18989	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18989	hp2	a0001	c0001	t0006	g0013	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18990	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18990	hp2	a0001	c0001	t0001	g0012	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18992	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18994	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18997	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18997	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18999	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA18999	hp2	a0004	c0006	t0001	g0014	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19002	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19002	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19004	hp1	a0006	c0013	t0001	g0052	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19004	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19005	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19005	hp2	a0004	c0006	t0001	g0047	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19006	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19007	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19007	hp2	a0001	c0002	t0001	g0003	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19010	hp1	a0001	c0010	t0001	g0036	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19011	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19030	hp1	a0002	c0003	t0004	g0008	AFR	LWK	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19030	hp2	a0002	c0003	t0004	g0008	AFR	LWK	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19043	hp2	a0002	c0003	t0002	g0016	AFR	LWK	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19055	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19057	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19060	hp1	a0005	c0007	t0001	g0015	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19063	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19064	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19066	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19067	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19068	hp1	a0001	c0001	t0001	g0018	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19070	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19070	hp2	a0001	c0001	t0001	g0034	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19074	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19079	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19080	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19082	hp2	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19083	hp1	a0001	c0001	t0001	g0002	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19083	hp2	a0001	c0001	t0001	g0041	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19090	hp1	a0005	c0007	t0001	g0015	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19240	hp1	a0002	c0003	t0002	g0006	AFR	YRI	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA19240	hp2	a0001	c0002	t0002	g0005	AFR	YRI	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA20129	hp1	a0001	c0002	t0001	g0003	AFR	ASW	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA20129	hp2	a0001	c0001	t0001	g0002	AFR	ASW	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA20805	hp1	a0001	c0002	t0001	g0003	EUR	TSI	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01123	hp1	a0001	c0002	t0001	g0003	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG01123	hp2	a0001	c0001	t0003	g0019	AMR	CLM	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02109	hp1	a0001	c0002	t0002	g0005	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02109	hp2	a0001	c0001	t0001	g0004	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02486	hp1	a0001	c0002	t0001	g0003	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02486	hp2	a0003	c0004	t0001	g0007	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02559	hp1	a0001	c0002	t0001	g0010	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG02559	hp2	a0001	c0002	t0001	g0003	AFR	ACB	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03471	hp1	a0001	c0002	t0001	g0003	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG03471	hp2	a0002	c0003	t0004	g0008	AFR	MSL	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA20300	hp1	a0001	c0002	t0001	g0003	AFR	USA	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA21309	hp1	a0002	c0003	t0004	g0008	AFR	LWK	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
NA21309	hp2	a0002	c0003	t0002	g0006	AFR	LWK	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0004	REF	REF	VSX1_chr20_25070463_25087141	VSX1	chr20	25070463	25087141

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr20:25078861	C C	A A	1	a0007 a0007	1	NA18976.hp2 NA18976.hp2	missense_variant	MODERATE	c.595G>T c.595G>T	p.Val199Leu p.Val199Leu	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/5	640/1941	595/1098	199/365	chr20	25078861
chr20:25079460	C C	A A	1	a0004 a0004	4	HG00597.hp2 NA18971.hp2 NA18999.hp2 others(1): Show HG00597.hp2 NA18971.hp2 NA18999.hp2 NA19005.hp2	missense_variant	MODERATE	c.479G>T c.479G>T	p.Gly160Val p.Gly160Val	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/5	524/1941	479/1098	160/365	chr20	25079460
chr20:25079487	T T	C C	1	a0005 a0005	3	NA18986.hp1 NA19060.hp1 NA19090.hp1 NA18986.hp1 NA19060.hp1 NA19090.hp1	missense_variant	MODERATE	c.452A>G c.452A>G	p.Asn151Ser p.Asn151Ser	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/5	497/1941	452/1098	151/365	chr20	25079487
chr20:25079507	G G	C C	1	a0008 a0008	1	HG02523.hp2 HG02523.hp2	missense_variant	MODERATE	c.432C>G c.432C>G	p.Asp144Glu p.Asp144Glu	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/5	477/1941	432/1098	144/365	chr20	25079507
chr20:25081706	G G	T T	1	a0002 a0002	19	HG02145.hp1 HG02257.hp2 HG02258.hp1 others(16): Show HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02630.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03471.hp2 NA18522.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA21309.hp1 NA21309.hp2	missense_variant	MODERATE	c.391C>A c.391C>A	p.Arg131Ser p.Arg131Ser	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/5	436/1941	391/1098	131/365	chr20	25081706
chr20:25081782	G G	T T	1	a0003 a0003	8	HG00738.hp2 HG01167.hp2 HG01169.hp1 others(5): Show HG00738.hp2 HG01167.hp2 HG01169.hp1 HG01243.hp2 HG02451.hp2 HG02486.hp2 HG02723.hp2 HG03041.hp1	missense_variant	MODERATE	c.315C>A c.315C>A	p.Asp105Glu p.Asp105Glu	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/5	360/1941	315/1098	105/365	chr20	25081782
chr20:25082057	T T	G G	1	a0006 a0006	1	NA19004.hp1 NA19004.hp1	missense_variant	MODERATE	c.40A>C c.40A>C	p.Ser14Arg p.Ser14Arg	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/5	85/1941	40/1098	14/365	chr20	25082057
chr20:25082084	C C	T T	1	a0009 a0009	1	HG00558.hp1 HG00558.hp1	missense_variant	MODERATE	c.13G>A c.13G>A	p.Asp5Asn p.Asp5Asn	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/5	58/1941	13/1098	5/365	chr20	25082084

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr20:25077776	C C	T T	1	a0001c0010 a0001c0010	1	NA19010.hp1 NA19010.hp1	synonymous_variant	LOW	c.717G>A c.717G>A	p.Gly239Gly p.Gly239Gly	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/5	762/1941	717/1098	239/365	chr20	25077776
chr20:25078910	T T	C C	2	a0001c0002 a0002c0003 a0001c0002 a0002c0003	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	synonymous_variant	LOW	c.546A>G c.546A>G	p.Ala182Ala p.Ala182Ala	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/5	591/1941	546/1098	182/365	chr20	25078910
chr20:25081758	G G	A A	1	a0001c0005 a0001c0005	5	HG01891.hp2 HG02572.hp2 HG02965.hp1 others(2): Show HG01891.hp2 HG02572.hp2 HG02965.hp1 HG03195.hp1 HG03453.hp2	synonymous_variant	LOW	c.339C>T c.339C>T	p.Gly113Gly p.Gly113Gly	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/5	384/1941	339/1098	113/365	chr20	25081758
chr20:25082079	C C	A A	1	a0001c0008 a0001c0008	2	HG00140.hp2 HG01256.hp1 HG00140.hp2 HG01256.hp1	synonymous_variant	LOW	c.18G>T c.18G>T	p.Ser6Ser p.Ser6Ser	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/5	63/1941	18/1098	6/365	chr20	25082079

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr20:25075516	C C	T T	1	a0002c0003t0004 a0002c0003t0004	7	HG02896.hp1 HG02897.hp1 HG03130.hp2 others(4): Show HG02896.hp1 HG02897.hp1 HG03130.hp2 HG03471.hp2 NA19030.hp1 NA19030.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.745G>A c.745G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	5/5	745	chr20	25075516
chr20:25075517	G G	T T	1	a0001c0001t0006 a0001c0001t0006	3	HG00621.hp1 NA18978.hp2 NA18989.hp2 HG00621.hp1 NA18978.hp2 NA18989.hp2	3_prime_UTR_variant	MODIFIER	c.744C>A c.744C>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	5/5	744	chr20	25075517
chr20:25075625	A A	T T	1	a0001c0001t0007 a0001c0001t0007	1	HG02155.hp1 HG02155.hp1	3_prime_UTR_variant	MODIFIER	c.636T>A c.636T>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	5/5	636	chr20	25075625
chr20:25075765	T T	C C	1	a0001c0001t0003 a0001c0001t0003	8	HG00642.hp2 HG01123.hp2 HG01168.hp2 others(5): Show HG00642.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01361.hp1 HG01993.hp2 HG04184.hp1	3_prime_UTR_variant	MODIFIER	c.496A>G c.496A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	5/5	496	chr20	25075765
chr20:25075807	TC TC	T T	4	a0001c0002t0002 a0001c0002t0008 a0002c0003t0002 others(1): Show a0001c0002t0002 a0001c0002t0008 a0002c0003t0002 a0002c0003t0004	36	HG00741.hp2 HG01884.hp2 HG02109.hp1 others(33): Show HG00741.hp2 HG01884.hp2 HG02109.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02630.hp1 HG02647.hp1 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 NA18522.hp1 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.453delG c.453delG	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	5/5	453	chr20	25075807
chr20:25076061	C C	A A	1	a0001c0001t0005 a0001c0001t0005	4	HG01069.hp1 HG01346.hp2 HG02300.hp2 others(1): Show HG01069.hp1 HG01346.hp2 HG02300.hp2 HG03704.hp1	3_prime_UTR_variant	MODIFIER	c.200G>T c.200G>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	5/5	200	chr20	25076061
chr20:25076157	G G	A A	1	a0001c0002t0008 a0001c0002t0008	1	HG02809.hp2 HG02809.hp2	3_prime_UTR_variant	MODIFIER	c.104C>T c.104C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	5/5	104	chr20	25076157

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr20:25076555	T T	TA TA	7	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0027 others(4): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031	57	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(54): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02148.hp1 HG02148.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02886.hp1 HG02895.hp2 HG03017.hp1 HG03098.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1	splice_region_variant&intron_variant	LOW	c.809-6dupT c.809-6dupT	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25076555
chr20:25076555	T T	TAA TAA	2	a0001c0002t0002g0005 a0001c0002t0002g0033 a0001c0002t0002g0005 a0001c0002t0002g0033	14	HG02109.hp1 HG02258.hp2 HG02647.hp1 others(11): Show HG02109.hp1 HG02258.hp2 HG02647.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03516.hp1 NA18906.hp2 NA19240.hp2	splice_region_variant&intron_variant	LOW	c.809-7_809-6dupTT c.809-7_809-6dupTT	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25076555
chr20:25076647	G G	C C	3	a0001c0005t0001g0021 a0001c0005t0001g0022 a0001c0005t0001g0051 a0001c0005t0001g0021 a0001c0005t0001g0022 a0001c0005t0001g0051	5	HG01891.hp2 HG02572.hp2 HG02965.hp1 others(2): Show HG01891.hp2 HG02572.hp2 HG02965.hp1 HG03195.hp1 HG03453.hp2	intron_variant	MODIFIER	c.809-97C>G c.809-97C>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25076647
chr20:25076726	G G	A A	2	a0001c0002t0002g0005 a0001c0002t0002g0033 a0001c0002t0002g0005 a0001c0002t0002g0033	14	HG02109.hp1 HG02258.hp2 HG02647.hp1 others(11): Show HG02109.hp1 HG02258.hp2 HG02647.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03516.hp1 NA18906.hp2 NA19240.hp2	intron_variant	MODIFIER	c.809-176C>T c.809-176C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25076726
chr20:25076739	G G	A A	33	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0012 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0003g0009 a0001c0001t0003g0019 a0001c0001t0005g0011 a0001c0001t0006g0013 a0001c0001t0007g0035 a0001c0005t0001g0021 a0001c0005t0001g0022 a0001c0005t0001g0051 a0001c0008t0001g0023 a0001c0010t0001g0036 a0003c0004t0001g0007 a0004c0006t0001g0014 a0004c0006t0001g0047 a0005c0007t0001g0015 a0006c0013t0001g0052 a0007c0011t0001g0042 a0008c0012t0001g0044 a0009c0009t0001g0024	257	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(254): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01099.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01261.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02083.hp1 HG02083.hp2 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18976.hp1 NA18976.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.809-189C>T c.809-189C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25076739
chr20:25076809	G G	A A	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	NA18949.hp2 NA18949.hp2	intron_variant	MODIFIER	c.809-259C>T c.809-259C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25076809
chr20:25076814	C C	G G	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	HG01081.hp2 HG01081.hp2	intron_variant	MODIFIER	c.809-264G>C c.809-264G>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25076814
chr20:25077004	A A	G G	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	HG03540.hp2 HG03540.hp2	intron_variant	MODIFIER	c.809-454T>C c.809-454T>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25077004
chr20:25077061	C C	G G	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	HG01975.hp2 HG01975.hp2	intron_variant	MODIFIER	c.809-511G>C c.809-511G>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25077061
chr20:25077062	G G	A A	33	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0012 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0003g0009 a0001c0001t0003g0019 a0001c0001t0005g0011 a0001c0001t0006g0013 a0001c0001t0007g0035 a0001c0005t0001g0021 a0001c0005t0001g0022 a0001c0005t0001g0051 a0001c0008t0001g0023 a0001c0010t0001g0036 a0003c0004t0001g0007 a0004c0006t0001g0014 a0004c0006t0001g0047 a0005c0007t0001g0015 a0006c0013t0001g0052 a0007c0011t0001g0042 a0008c0012t0001g0044 a0009c0009t0001g0024	257	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(254): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01099.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01261.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02083.hp1 HG02083.hp2 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18976.hp1 NA18976.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.809-512C>T c.809-512C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25077062
chr20:25077184	G G	A A	8	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(5): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031	58	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(55): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02148.hp1 HG02148.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02886.hp1 HG02895.hp2 HG03017.hp1 HG03098.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1	intron_variant	MODIFIER	c.808+501C>T c.808+501C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25077184
chr20:25077191	C C	T T	1	a0001c0002t0008g0032 a0001c0002t0008g0032	1	HG02809.hp2 HG02809.hp2	intron_variant	MODIFIER	c.808+494G>A c.808+494G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25077191
chr20:25077352	T T	C C	1	a0001c0002t0001g0027 a0001c0002t0001g0027	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.808+333A>G c.808+333A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25077352
chr20:25077499	T T	C C	8	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(5): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031	58	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(55): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02148.hp1 HG02148.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02886.hp1 HG02895.hp2 HG03017.hp1 HG03098.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1	intron_variant	MODIFIER	c.808+186A>G c.808+186A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	4/4	chr20	25077499
chr20:25078002	T T	G G	1	a0001c0001t0001g0020 a0001c0001t0001g0020	2	HG01891.hp1 HG02622.hp1 HG01891.hp1 HG02622.hp1	intron_variant	MODIFIER	c.628-137A>C c.628-137A>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078002
chr20:25078075	TCA TCA	T T	3	a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033	16	HG00741.hp2 HG01884.hp2 HG02109.hp1 others(13): Show HG00741.hp2 HG01884.hp2 HG02109.hp1 HG02258.hp2 HG02647.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03516.hp1 NA18906.hp2 NA19240.hp2	intron_variant	MODIFIER	c.628-212_628-211del others(2): Show c.628-212_628-211delTG	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078075
chr20:25078143	GA GA	G G	8	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(5): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031	58	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(55): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02148.hp1 HG02148.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02886.hp1 HG02895.hp2 HG03017.hp1 HG03098.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1	intron_variant	MODIFIER	c.628-279delT c.628-279delT	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078143
chr20:25078157	A A	T T	3	a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033	16	HG00741.hp2 HG01884.hp2 HG02109.hp1 others(13): Show HG00741.hp2 HG01884.hp2 HG02109.hp1 HG02258.hp2 HG02647.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03516.hp1 NA18906.hp2 NA19240.hp2	intron_variant	MODIFIER	c.628-292T>A c.628-292T>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078157
chr20:25078165	T T	C C	1	a0001c0002t0001g0030 a0001c0002t0001g0030	1	HG02895.hp2 HG02895.hp2	intron_variant	MODIFIER	c.628-300A>G c.628-300A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078165
chr20:25078235	C C	T T	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.628-370G>A c.628-370G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078235
chr20:25078273	G G	A A	1	a0001c0002t0001g0028 a0001c0002t0001g0028	1	HG01175.hp2 HG01175.hp2	intron_variant	MODIFIER	c.628-408C>T c.628-408C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078273
chr20:25078483	A A	G G	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.627+346T>C c.627+346T>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078483
chr20:25078547	C C	CT CT	7	a0001c0001t0001g0018 a0001c0002t0002g0005 a0001c0002t0002g0017 others(4): Show a0001c0001t0001g0018 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0016 a0002c0003t0002g0025	22	HG00544.hp2 HG00741.hp2 HG01884.hp2 others(19): Show HG00544.hp2 HG00741.hp2 HG01884.hp2 HG02109.hp1 HG02145.hp1 HG02258.hp2 HG02647.hp1 HG02809.hp2 HG02818.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03516.hp1 NA18522.hp1 NA18906.hp2 NA19043.hp2 NA19068.hp1 NA19240.hp2	intron_variant	MODIFIER	c.627+281dupA c.627+281dupA	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078547
chr20:25078547	CT CT	C C	10	a0001c0001t0001g0041 a0001c0002t0001g0003 a0001c0002t0001g0010 others(7): Show a0001c0001t0001g0041 a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0005t0001g0051	60	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(57): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02148.hp1 HG02148.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02886.hp1 HG02895.hp2 HG02965.hp1 HG03017.hp1 HG03098.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19083.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1	intron_variant	MODIFIER	c.627+281delA c.627+281delA	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078547
chr20:25078702	G G	A A	1	a0001c0002t0001g0029 a0001c0002t0001g0029	1	HG03710.hp1 HG03710.hp1	intron_variant	MODIFIER	c.627+127C>T c.627+127C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078702
chr20:25078745	A A	T T	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.627+84T>A c.627+84T>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078745
chr20:25078778	T T	C C	1	a0001c0002t0002g0033 a0001c0002t0002g0033	1	HG03516.hp1 HG03516.hp1	intron_variant	MODIFIER	c.627+51A>G c.627+51A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078778
chr20:25078806	C C	T T	12	a0001c0001t0001g0002 a0001c0001t0001g0018 a0001c0001t0003g0009 others(9): Show a0001c0001t0001g0002 a0001c0001t0001g0018 a0001c0001t0003g0009 a0001c0001t0003g0019 a0001c0001t0005g0011 a0001c0001t0006g0013 a0001c0001t0007g0035 a0004c0006t0001g0014 a0004c0006t0001g0047 a0005c0007t0001g0015 a0007c0011t0001g0042 a0008c0012t0001g0044	94	HG00408.hp1 HG00408.hp2 HG00423.hp2 others(91): Show HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp2 HG00673.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01346.hp2 HG01361.hp1 HG01993.hp2 HG02004.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02155.hp1 HG02165.hp2 HG02273.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp2 HG02698.hp2 HG02735.hp1 HG03490.hp2 HG03654.hp2 HG03704.hp1 HG04184.hp1 HG04228.hp2 NA18940.hp1 NA18941.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18961.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp2 NA18976.hp2 NA18978.hp1 NA18978.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18992.hp1 NA18994.hp2 NA18997.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp2 NA19007.hp1 NA19011.hp1 NA19055.hp1 NA19057.hp1 NA19060.hp1 NA19063.hp1 NA19064.hp1 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19074.hp2 NA19079.hp1 NA19080.hp1 NA19082.hp2 NA19083.hp1 NA19090.hp1 NA20129.hp2	intron_variant	MODIFIER	c.627+23G>A c.627+23G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	3/4	chr20	25078806
chr20:25079094	AAT AAT	A A	2	a0002c0003t0002g0006 a0002c0003t0002g0025 a0002c0003t0002g0006 a0002c0003t0002g0025	10	HG02257.hp2 HG02258.hp1 HG02630.hp1 others(7): Show HG02257.hp2 HG02258.hp1 HG02630.hp1 HG02922.hp1 HG02976.hp1 HG03130.hp1 HG03139.hp1 NA18522.hp1 NA19240.hp1 NA21309.hp2	intron_variant	MODIFIER	c.504-144_504-143del others(2): Show c.504-144_504-143delAT	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/4	chr20	25079094
chr20:25079194	A A	G G	1	a0002c0003t0002g0016 a0002c0003t0002g0016	2	HG02145.hp1 NA19043.hp2 HG02145.hp1 NA19043.hp2	intron_variant	MODIFIER	c.503+242T>C c.503+242T>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/4	chr20	25079194
chr20:25079197	T T	G G	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG01255.hp2 HG01255.hp2	intron_variant	MODIFIER	c.503+239A>C c.503+239A>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/4	chr20	25079197
chr20:25079202	A A	C C	1	a0001c0002t0001g0010 a0001c0002t0001g0010	5	HG00735.hp2 HG01934.hp1 HG02148.hp2 others(2): Show HG00735.hp2 HG01934.hp1 HG02148.hp2 HG02559.hp1 HG02886.hp1	intron_variant	MODIFIER	c.503+234T>G c.503+234T>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/4	chr20	25079202
chr20:25079221	T T	C C	8	a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 others(5): Show a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	36	HG00741.hp2 HG01884.hp2 HG02109.hp1 others(33): Show HG00741.hp2 HG01884.hp2 HG02109.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02630.hp1 HG02647.hp1 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 NA18522.hp1 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.503+215A>G c.503+215A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/4	chr20	25079221
chr20:25079234	C C	T T	1	a0003c0004t0001g0007 a0003c0004t0001g0007	8	HG00738.hp2 HG01167.hp2 HG01169.hp1 others(5): Show HG00738.hp2 HG01167.hp2 HG01169.hp1 HG01243.hp2 HG02451.hp2 HG02486.hp2 HG02723.hp2 HG03041.hp1	intron_variant	MODIFIER	c.503+202G>A c.503+202G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	2/4	chr20	25079234
chr20:25079577	T T	G G	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	HG02280.hp1 HG02280.hp1	intron_variant	MODIFIER	c.425-63A>C c.425-63A>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25079577
chr20:25079629	G G	C C	1	a0005c0007t0001g0015 a0005c0007t0001g0015	3	NA18986.hp1 NA19060.hp1 NA19090.hp1 NA18986.hp1 NA19060.hp1 NA19090.hp1	intron_variant	MODIFIER	c.425-115C>G c.425-115C>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25079629
chr20:25079685	C C	T T	1	a0002c0003t0004g0008 a0002c0003t0004g0008	7	HG02896.hp1 HG02897.hp1 HG03130.hp2 others(4): Show HG02896.hp1 HG02897.hp1 HG03130.hp2 HG03471.hp2 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.425-171G>A c.425-171G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25079685
chr20:25079827	T T	C C	4	a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 others(1): Show a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	19	HG02145.hp1 HG02257.hp2 HG02258.hp1 others(16): Show HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02630.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03471.hp2 NA18522.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.425-313A>G c.425-313A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25079827
chr20:25080183	AAAG AAAG	A A	1	a0001c0001t0003g0009 a0001c0001t0003g0009	6	HG01168.hp2 HG01169.hp2 HG01175.hp1 others(3): Show HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01361.hp1 HG01993.hp2 HG04184.hp1	intron_variant	MODIFIER	c.425-672_425-670del others(3): Show c.425-672_425-670delCTT	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080183
chr20:25080191	T T	C C	1	a0002c0003t0002g0016 a0002c0003t0002g0016	2	HG02145.hp1 NA19043.hp2 HG02145.hp1 NA19043.hp2	intron_variant	MODIFIER	c.425-677A>G c.425-677A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080191
chr20:25080345	G G	A A	1	a0001c0002t0001g0030 a0001c0002t0001g0030	1	HG02895.hp2 HG02895.hp2	intron_variant	MODIFIER	c.425-831C>T c.425-831C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080345
chr20:25080396	A A	T T	1	a0001c0002t0001g0010 a0001c0002t0001g0010	5	HG00735.hp2 HG01934.hp1 HG02148.hp2 others(2): Show HG00735.hp2 HG01934.hp1 HG02148.hp2 HG02559.hp1 HG02886.hp1	intron_variant	MODIFIER	c.425-882T>A c.425-882T>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080396
chr20:25080532	T T	C C	1	a0001c0002t0001g0031 a0001c0002t0001g0031	1	HG03688.hp1 HG03688.hp1	intron_variant	MODIFIER	c.425-1018A>G c.425-1018A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080532
chr20:25080592	G G	A A	2	a0001c0001t0001g0046 a0004c0006t0001g0047 a0001c0001t0001g0046 a0004c0006t0001g0047	2	HG02735.hp2 NA19005.hp2 HG02735.hp2 NA19005.hp2	intron_variant	MODIFIER	c.425-1078C>T c.425-1078C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080592
chr20:25080672	C C	T T	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.424+1001G>A c.424+1001G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080672
chr20:25080774	A A	T T	1	a0001c0005t0001g0021 a0001c0005t0001g0021	2	HG01891.hp2 HG03195.hp1 HG01891.hp2 HG03195.hp1	intron_variant	MODIFIER	c.424+899T>A c.424+899T>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080774
chr20:25080862	T T	G G	1	a0001c0005t0001g0051 a0001c0005t0001g0051	1	HG02965.hp1 HG02965.hp1	intron_variant	MODIFIER	c.424+811A>C c.424+811A>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080862
chr20:25080872	G G	A A	4	a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 others(1): Show a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	19	HG02145.hp1 HG02257.hp2 HG02258.hp1 others(16): Show HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02630.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03471.hp2 NA18522.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.424+801C>T c.424+801C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080872
chr20:25080875	G G	A A	1	a0001c0002t0002g0017 a0001c0002t0002g0017	2	HG00741.hp2 HG01884.hp2 HG00741.hp2 HG01884.hp2	intron_variant	MODIFIER	c.424+798C>T c.424+798C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080875
chr20:25080894	G G	A A	7	a0001c0002t0001g0003 a0001c0002t0001g0026 a0001c0002t0001g0027 others(4): Show a0001c0002t0001g0003 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031	53	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(50): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01975.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02895.hp2 HG03017.hp1 HG03098.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1	intron_variant	MODIFIER	c.424+779C>T c.424+779C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080894
chr20:25080927	T T	A A	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	NA18906.hp1 NA18906.hp1	intron_variant	MODIFIER	c.424+746A>T c.424+746A>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080927
chr20:25080960	G G	T T	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	NA19070.hp2 NA19070.hp2	intron_variant	MODIFIER	c.424+713C>A c.424+713C>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25080960
chr20:25081162	C C	T T	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.424+511G>A c.424+511G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081162
chr20:25081177	A A	G G	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.424+496T>C c.424+496T>C	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081177
chr20:25081198	C C	T T	1	a0001c0001t0001g0012 a0001c0001t0001g0012	3	HG00423.hp1 HG02071.hp1 NA18990.hp2 HG00423.hp1 HG02071.hp1 NA18990.hp2	intron_variant	MODIFIER	c.424+475G>A c.424+475G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081198
chr20:25081229	AATC AATC	A A	8	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(5): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031	58	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(55): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02148.hp1 HG02148.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02886.hp1 HG02895.hp2 HG03017.hp1 HG03098.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1	intron_variant	MODIFIER	c.424+441_424+443del others(3): Show c.424+441_424+443delGAT	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081229
chr20:25081239	T T	C C	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.424+434A>G c.424+434A>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081239
chr20:25081343	C C	A A	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG02083.hp1 HG02083.hp1	intron_variant	MODIFIER	c.424+330G>T c.424+330G>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081343
chr20:25081344	G G	A A	8	a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 others(5): Show a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	36	HG00741.hp2 HG01884.hp2 HG02109.hp1 others(33): Show HG00741.hp2 HG01884.hp2 HG02109.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02630.hp1 HG02647.hp1 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 NA18522.hp1 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.424+329C>T c.424+329C>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081344
chr20:25081365	T T	A A	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.424+308A>T c.424+308A>T	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081365
chr20:25081411	G G	C C	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.424+262C>G c.424+262C>G	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081411
chr20:25081509	C C	T T	16	a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0010 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0002g0005 a0001c0002t0002g0017 a0001c0002t0002g0033 a0001c0002t0008g0032 a0002c0003t0002g0006 a0002c0003t0002g0016 a0002c0003t0002g0025 a0002c0003t0004g0008	94	HG00099.hp2 HG00323.hp1 HG00733.hp2 others(91): Show HG00099.hp2 HG00323.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18943.hp1 NA18962.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.424+164G>A c.424+164G>A	VSX1	ENSG00000100987.15	transcript	ENST00000376709.9	protein_coding	1/4	chr20	25081509

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🧬 JoGo Online Haplotype Explorer VSX1_chr20_25070463_25087141

JoGo Local Haplotype Explorer (on iGV) VSX1_chr20_25070463_25087141

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 13)

TTranscript Level Haplotype Info (Total: 8)

GGenebody Level Haplotype Info (Total: 52)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 13)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 20)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 52)

Haplotype Details by Sample (Haploid Level) (Total: 368)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 8)

CCoding Level Variants (Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 7)

GGenebody Level Haplotype Variants (Intron) (Total: 62)

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Annotation (Repeats)

Annotation (SNP Array)