Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	1234
ensemblid	ENSG00000160791.14
hgncid	1606
symbol	CCR5
name	C-C motif chemokine receptor 5
refseq_nuc	NM_001394783.1
refseq_prot	NP_001381712.1
ensembl_nuc	ENST00000292303.5
ensembl_prot	ENSP00000292303.4
mane_status	MANE Select
chr	chr3
start	46370946
end	46376206
strand	+
ver	v1.2
region	chr3:46370946-46376206
region5000	chr3:46365946-46381206
regionname0	CCR5_chr3_46370946_46376206
regionname5000	CCR5_chr3_46365946_46381206

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	352	390	84	69	181	12	42	149	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0002	0/0	352	18	0	0	18	0	0	17	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0003	0/0	352	5	4	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0004	0/0	215	4	0	2	0	2	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0005	0/0	67	1	0	0	1	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0006	0/0	352	1	0	0	1	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0007	0/0	352	1	0	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0008	0/0	352	1	0	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0009	0/0	352	1	0	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1059	387	82	69	180	12	42	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0002	0/0	1059	18	0	0	18	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0003	0/0	1059	5	4	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0004	0/0	1027	4	0	2	0	2	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0005	0/0	1059	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0006	0/0	1059	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0007	0/0	1059	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0008	0/0	1059	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0009	0/0	1059	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0010	0/0	1059	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0011	0/0	1059	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
c0012	0/0	1059	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	2300	201	30	44	101	7	17	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0002	0/0	2300	122	5	16	86	6	9	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0003	0/0	2300	26	24	1	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0004	0/0	2300	22	0	6	7	0	9	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0005	0/0	2300	17	15	2	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0006	0/0	2300	4	4	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0007	0/0	2300	3	0	1	0	0	2	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0008	0/0	2300	3	0	2	0	1	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0009	0/0	2300	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0010	0/0	2300	2	0	0	1	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0011	0/0	2300	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0012	0/0	2300	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0013	0/0	2300	2	0	1	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0014	0/0	2300	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0015	0/0	2300	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0016	0/0	2300	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0017	0/0	2300	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0018	0/0	2300	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0019	0/0	2300	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0020	0/0	2300	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0021	0/0	2300	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0022	0/0	2300	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0023	0/0	2300	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0024	0/0	2300	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0025	0/0	2300	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0026	0/0	2300	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
t0027	0/0	2284	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	132	10	19	84	7	12	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0002	1/1	122	44	19	42	6	9	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0003	0/0	103	12	21	61	1	8	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0004	0/0	23	0	6	7	0	10	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0005	0/0	21	18	3	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0006	0/0	4	0	4	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0007	0/0	3	3	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0008	0/0	2	0	0	2	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0009	0/0	2	0	0	2	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0010	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0011	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0012	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0013	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0014	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0015	0/0	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0016	0/0	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0017	0/0	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0018	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
g0019	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1059	387	82	69	180	12	42	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0006	0/0	1059	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0008	0/0	1059	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0009	0/0	1059	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0002c0002	0/0	1059	18	0	0	18	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0003c0003	0/0	1059	5	4	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0004c0004	0/0	1027	4	0	2	0	2	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0005c0012	0/0	1059	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0006c0005	0/0	1059	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0007c0011	0/0	1059	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0008c0010	0/0	1059	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0009c0007	0/0	1059	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	3358	171	25	41	81	5	17	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0002	0/0	3358	120	5	15	85	6	9	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0003	0/0	3358	26	24	1	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0004	0/0	3358	22	0	6	7	0	9	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0005	0/0	3358	17	15	2	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0006	0/0	3358	4	4	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0007	0/0	3358	3	0	1	0	0	2	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0008	0/0	3358	3	0	2	0	1	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0009	0/0	3358	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0010	0/0	3358	2	0	0	1	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0011	0/0	3358	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0012	0/0	3358	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0013	0/0	3358	2	0	1	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0014	0/0	3358	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0015	0/0	3358	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0017	0/0	3358	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0018	0/0	3358	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0019	0/0	3358	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0020	0/0	3358	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0021	0/0	3358	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0022	0/0	3358	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0023	0/0	3358	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0025	0/0	3358	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0001t0026	0/0	3358	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0006t0001	0/0	3358	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0008t0001	0/0	3358	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0001c0009t0024	0/0	3358	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0002c0002t0001	0/0	3358	18	0	0	18	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0003c0003t0001	0/0	3358	5	4	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0004c0004t0001	0/0	3326	4	0	2	0	2	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0005c0012t0027	0/0	3342	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0006c0005t0002	0/0	3358	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0007c0011t0016	0/0	3358	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0008c0010t0002	0/0	3358	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206
a0009c0007t0001	0/0	3358	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	copy fasta	chr3	46365946	46381206

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0002	1/1	85	16	15	40	4	8	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0001g0003	0/0	77	9	20	41	1	6	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0001g0006	0/0	4	0	4	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0001g0013	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0001g0014	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0001g0016	0/0	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0001g0017	0/0	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0001g0018	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0002g0001	0/0	113	5	15	78	6	9	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0002g0008	0/0	2	0	0	2	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0002g0009	0/0	2	0	0	2	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0002g0010	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0002g0011	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0002g0012	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0003g0001	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0003g0002	0/0	25	24	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0004g0004	0/0	22	0	6	7	0	9	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0005g0005	0/0	14	12	2	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0005g0007	0/0	3	3	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0006g0001	0/0	4	4	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0007g0003	0/0	3	0	1	0	0	2	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0008g0001	0/0	3	0	2	0	1	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0009g0003	0/0	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0010g0001	0/0	2	0	0	1	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0011g0005	0/0	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0012g0005	0/0	2	2	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0013g0001	0/0	2	0	1	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0014g0003	0/0	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0015g0001	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0017g0002	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0018g0003	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0019g0003	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0020g0001	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0021g0001	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0022g0001	0/0	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0023g0004	0/0	1	0	0	0	0	1	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0025g0001	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0001t0026g0005	0/0	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0006t0001g0002	0/0	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0008t0001g0002	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0001c0009t0024g0005	0/0	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0002c0002t0001g0003	0/0	18	0	0	18	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0003c0003t0001g0002	0/0	4	3	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0003c0003t0001g0015	0/0	1	1	0	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0004c0004t0001g0002	0/0	4	0	2	0	2	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0005c0012t0027g0019	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0006c0005t0002g0001	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0007c0011t0016g0005	0/0	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0008c0010t0002g0001	0/0	1	0	1	0	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
a0009c0007t0001g0002	0/0	1	0	0	1	0	0	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0002	EUR	GBR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00099	hp2	a0001	c0001	t0002	g0001	EUR	GBR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00140	hp1	a0004	c0004	t0001	g0002	EUR	GBR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00140	hp2	a0001	c0001	t0008	g0001	EUR	GBR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00280	hp1	a0004	c0004	t0001	g0002	EUR	FIN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00280	hp2	a0001	c0001	t0001	g0002	EUR	FIN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00438	hp1	a0001	c0001	t0025	g0001	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00438	hp2	a0001	c0001	t0001	g0003	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00544	hp1	a0001	c0001	t0002	g0001	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00544	hp2	a0001	c0001	t0002	g0001	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00558	hp1	a0001	c0001	t0002	g0001	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00558	hp2	a0001	c0001	t0002	g0001	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00609	hp1	a0001	c0001	t0001	g0002	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00609	hp2	a0001	c0001	t0002	g0001	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00621	hp1	a0001	c0001	t0001	g0003	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00621	hp2	a0001	c0001	t0019	g0003	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00639	hp1	a0001	c0001	t0001	g0016	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00639	hp2	a0001	c0001	t0002	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00642	hp1	a0001	c0001	t0008	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00642	hp2	a0001	c0001	t0002	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00673	hp1	a0001	c0001	t0002	g0001	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00673	hp2	a0002	c0002	t0001	g0003	EAS	CHS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00738	hp1	a0001	c0001	t0002	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG00738	hp2	a0001	c0001	t0002	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01069	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01069	hp2	a0001	c0001	t0002	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01070	hp1	a0001	c0001	t0001	g0006	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01070	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01071	hp1	a0001	c0001	t0002	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01071	hp2	a0001	c0001	t0001	g0006	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01074	hp1	a0001	c0001	t0001	g0006	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01074	hp2	a0003	c0003	t0001	g0002	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01081	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01081	hp2	a0001	c0001	t0008	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01099	hp1	a0001	c0001	t0001	g0006	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01099	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01106	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01106	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01109	hp1	a0001	c0001	t0003	g0002	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01109	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01167	hp1	a0001	c0001	t0013	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01167	hp2	a0001	c0001	t0005	g0005	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01168	hp1	a0001	c0001	t0002	g0001	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01168	hp2	a0001	c0001	t0004	g0004	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01169	hp1	a0001	c0001	t0004	g0004	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01169	hp2	a0001	c0001	t0005	g0005	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01175	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01175	hp2	a0004	c0004	t0001	g0002	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01192	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01255	hp1	a0001	c0001	t0002	g0001	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01255	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01256	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01256	hp2	a0001	c0001	t0001	g0003	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01257	hp1	a0001	c0001	t0001	g0003	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01257	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01261	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01261	hp2	a0001	c0001	t0001	g0003	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01346	hp1	a0001	c0001	t0007	g0003	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01346	hp2	a0001	c0001	t0001	g0003	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01358	hp1	a0001	c0001	t0002	g0001	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01358	hp2	a0001	c0001	t0002	g0001	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01361	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01361	hp2	a0001	c0001	t0002	g0001	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01433	hp1	a0001	c0001	t0002	g0001	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01433	hp2	a0001	c0001	t0002	g0001	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01496	hp1	a0001	c0001	t0004	g0004	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01496	hp2	a0001	c0001	t0001	g0003	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01515	hp1	a0001	c0001	t0002	g0001	EUR	IBS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01515	hp2	a0001	c0001	t0001	g0002	EUR	IBS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01516	hp1	a0001	c0001	t0002	g0001	EUR	IBS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01516	hp2	a0001	c0001	t0002	g0001	EUR	IBS	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01884	hp1	a0001	c0001	t0003	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01884	hp2	a0001	c0001	t0001	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01891	hp1	a0001	c0001	t0001	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01891	hp2	a0001	c0001	t0003	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01934	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01934	hp2	a0007	c0011	t0016	g0005	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01943	hp1	a0001	c0001	t0001	g0017	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01943	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01975	hp1	a0001	c0001	t0002	g0001	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01975	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01978	hp1	a0001	c0001	t0004	g0004	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01978	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01981	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01981	hp2	a0001	c0001	t0004	g0004	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01993	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01993	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02004	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02004	hp2	a0008	c0010	t0002	g0001	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02015	hp1	a0001	c0001	t0020	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02015	hp2	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02027	hp1	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02027	hp2	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02040	hp1	a0001	c0008	t0001	g0002	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02040	hp2	a0001	c0001	t0010	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02055	hp1	a0001	c0001	t0005	g0005	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02055	hp2	a0001	c0001	t0001	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02056	hp1	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02056	hp2	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02074	hp1	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02074	hp2	a0001	c0001	t0001	g0002	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02080	hp1	a0001	c0001	t0002	g0011	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02080	hp2	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02083	hp1	a0009	c0007	t0001	g0002	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02083	hp2	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02145	hp1	a0001	c0001	t0003	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02145	hp2	a0001	c0001	t0001	g0003	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02148	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02148	hp2	a0001	c0001	t0002	g0001	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02165	hp1	a0001	c0001	t0002	g0001	EAS	CDX	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02165	hp2	a0001	c0001	t0002	g0001	EAS	CDX	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02257	hp1	a0001	c0001	t0002	g0001	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02257	hp2	a0001	c0001	t0001	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02258	hp1	a0001	c0001	t0003	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02258	hp2	a0001	c0001	t0012	g0005	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02273	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02273	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02280	hp1	a0001	c0001	t0001	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02280	hp2	a0001	c0001	t0001	g0003	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02293	hp1	a0001	c0001	t0004	g0004	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02293	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02300	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02300	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02451	hp1	a0001	c0001	t0003	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02451	hp2	a0001	c0001	t0003	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02523	hp1	a0001	c0001	t0002	g0010	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02523	hp2	a0001	c0001	t0002	g0001	EAS	KHV	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02572	hp1	a0001	c0001	t0005	g0005	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02572	hp2	a0001	c0001	t0006	g0001	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02615	hp1	a0003	c0003	t0001	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02615	hp2	a0001	c0001	t0002	g0001	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02622	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02622	hp2	a0001	c0001	t0003	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02630	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02630	hp2	a0001	c0001	t0003	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02683	hp1	a0001	c0001	t0007	g0003	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02683	hp2	a0001	c0001	t0004	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02698	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02698	hp2	a0001	c0001	t0002	g0001	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02717	hp1	a0001	c0001	t0003	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02717	hp2	a0001	c0001	t0009	g0003	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02735	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02735	hp2	a0001	c0001	t0004	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02738	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02738	hp2	a0001	c0001	t0002	g0001	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02809	hp1	a0001	c0001	t0003	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02809	hp2	a0001	c0001	t0005	g0007	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02818	hp1	a0003	c0003	t0001	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02818	hp2	a0001	c0001	t0001	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02886	hp1	a0001	c0001	t0001	g0003	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02886	hp2	a0001	c0001	t0002	g0001	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02897	hp1	a0001	c0001	t0003	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02897	hp2	a0001	c0001	t0003	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02922	hp1	a0001	c0001	t0001	g0003	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02922	hp2	a0001	c0001	t0005	g0005	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02965	hp1	a0001	c0001	t0001	g0002	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02965	hp2	a0003	c0003	t0001	g0015	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02970	hp1	a0001	c0001	t0001	g0003	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02970	hp2	a0001	c0001	t0026	g0005	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02976	hp1	a0001	c0001	t0005	g0005	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02976	hp2	a0001	c0001	t0003	g0002	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03017	hp1	a0001	c0001	t0002	g0001	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03017	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03041	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03041	hp2	a0001	c0001	t0003	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03130	hp1	a0001	c0001	t0005	g0005	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03130	hp2	a0001	c0001	t0005	g0005	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03139	hp1	a0001	c0001	t0003	g0002	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03139	hp2	a0001	c0001	t0011	g0005	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03195	hp1	a0003	c0003	t0001	g0002	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03195	hp2	a0001	c0001	t0001	g0002	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03225	hp1	a0001	c0001	t0003	g0002	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03225	hp2	a0001	c0001	t0014	g0003	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03239	hp1	a0001	c0001	t0004	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03239	hp2	a0001	c0001	t0001	g0003	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03453	hp1	a0001	c0001	t0012	g0005	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03453	hp2	a0001	c0001	t0005	g0005	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03486	hp1	a0001	c0001	t0003	g0002	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03486	hp2	a0001	c0001	t0001	g0002	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03490	hp1	a0001	c0001	t0004	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03490	hp2	a0001	c0001	t0002	g0001	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03491	hp1	a0001	c0001	t0007	g0003	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03491	hp2	a0001	c0001	t0004	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03516	hp1	a0001	c0001	t0009	g0003	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03516	hp2	a0001	c0001	t0005	g0005	AFR	ESN	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03540	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03540	hp2	a0001	c0001	t0001	g0003	AFR	GWD	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03579	hp1	a0001	c0001	t0001	g0003	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03579	hp2	a0001	c0001	t0003	g0002	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03654	hp1	a0001	c0001	t0004	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03654	hp2	a0001	c0001	t0001	g0003	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03669	hp1	a0001	c0001	t0017	g0002	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03669	hp2	a0001	c0001	t0001	g0013	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03688	hp1	a0001	c0001	t0001	g0002	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03688	hp2	a0001	c0001	t0002	g0001	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03704	hp1	a0001	c0001	t0013	g0001	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03704	hp2	a0001	c0001	t0023	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03710	hp1	a0001	c0001	t0004	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03710	hp2	a0001	c0001	t0004	g0004	SAS	PJL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03834	hp1	a0001	c0001	t0001	g0003	SAS	BEB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03834	hp2	a0001	c0001	t0002	g0001	SAS	BEB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03927	hp1	a0001	c0001	t0001	g0018	SAS	BEB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03927	hp2	a0001	c0001	t0001	g0014	SAS	BEB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04115	hp1	a0001	c0001	t0004	g0004	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04115	hp2	a0001	c0001	t0002	g0001	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04184	hp1	a0001	c0001	t0001	g0003	SAS	BEB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04184	hp2	a0001	c0001	t0001	g0002	SAS	BEB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04199	hp1	a0001	c0001	t0002	g0001	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04199	hp2	a0001	c0001	t0001	g0002	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04204	hp1	a0001	c0001	t0021	g0001	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04204	hp2	a0001	c0001	t0002	g0001	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04228	hp1	a0001	c0001	t0010	g0001	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG04228	hp2	a0001	c0001	t0001	g0002	SAS	STU	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18522	hp1	a0001	c0001	t0005	g0007	AFR	YRI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18522	hp2	a0001	c0001	t0011	g0005	AFR	YRI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18612	hp1	a0001	c0001	t0002	g0001	EAS	CHB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18612	hp2	a0001	c0001	t0004	g0004	EAS	CHB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18747	hp1	a0001	c0001	t0001	g0003	EAS	CHB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18747	hp2	a0001	c0001	t0002	g0001	EAS	CHB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18906	hp1	a0001	c0001	t0001	g0002	AFR	YRI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18906	hp2	a0001	c0001	t0003	g0002	AFR	YRI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18939	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18939	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18940	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18940	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18941	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18941	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18942	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18942	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18943	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18943	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18944	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18944	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18945	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18945	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18946	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18946	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18947	hp1	a0001	c0001	t0002	g0008	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18947	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18948	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18948	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18951	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18951	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18952	hp1	a0001	c0001	t0004	g0004	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18952	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18953	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18953	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18954	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18954	hp2	a0001	c0001	t0004	g0004	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18956	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18956	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18957	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18957	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18959	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18959	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18960	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18960	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18962	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18962	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18963	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18963	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18964	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18964	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18965	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18965	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18966	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18966	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18967	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18967	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18968	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18968	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18969	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18969	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18970	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18970	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18971	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18971	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18973	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18973	hp2	a0001	c0001	t0002	g0009	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18978	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18978	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18979	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18979	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18980	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18980	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18981	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18981	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18982	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18982	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18983	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18983	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18984	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18984	hp2	a0001	c0001	t0004	g0004	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18985	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18985	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18986	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18986	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18989	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18989	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18990	hp1	a0001	c0001	t0015	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18990	hp2	a0006	c0005	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18991	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18991	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18992	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18992	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18993	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18993	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18994	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18994	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18997	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18997	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18998	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18998	hp2	a0001	c0001	t0018	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18999	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18999	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19000	hp1	a0001	c0001	t0003	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19000	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19001	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19001	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19005	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19005	hp2	a0001	c0001	t0002	g0008	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19006	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19006	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19009	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19009	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19010	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19010	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19011	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19011	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19012	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19012	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19030	hp1	a0001	c0006	t0001	g0002	AFR	LWK	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19030	hp2	a0001	c0001	t0001	g0002	AFR	LWK	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19043	hp1	a0001	c0001	t0022	g0001	AFR	LWK	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19043	hp2	a0001	c0001	t0005	g0005	AFR	LWK	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19054	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19054	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19058	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19058	hp2	a0001	c0001	t0002	g0012	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19060	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19060	hp2	a0005	c0012	t0027	g0019	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19062	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19062	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19063	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19063	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19064	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19064	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19065	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19065	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19066	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19066	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19068	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19068	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19070	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19070	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19072	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19072	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19074	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19074	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19075	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19075	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19076	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19076	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19077	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19077	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19078	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19078	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19079	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19079	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19080	hp1	a0001	c0001	t0004	g0004	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19080	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19081	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19081	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19082	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19082	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19083	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19083	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19084	hp1	a0001	c0001	t0004	g0004	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19084	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19085	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19085	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19086	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19086	hp2	a0001	c0001	t0002	g0009	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19088	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19088	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19089	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19089	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19090	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19090	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19091	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19091	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19240	hp1	a0001	c0001	t0003	g0002	AFR	YRI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA19240	hp2	a0001	c0001	t0001	g0003	AFR	YRI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20129	hp1	a0001	c0001	t0001	g0002	AFR	ASW	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20129	hp2	a0001	c0001	t0006	g0001	AFR	ASW	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20752	hp1	a0001	c0001	t0001	g0002	EUR	TSI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20752	hp2	a0001	c0001	t0002	g0001	EUR	TSI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20805	hp1	a0001	c0001	t0001	g0003	EUR	TSI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20805	hp2	a0001	c0001	t0002	g0001	EUR	TSI	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20905	hp2	a0001	c0001	t0001	g0002	SAS	GIH	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01123	hp1	a0004	c0004	t0001	g0002	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG01123	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02109	hp1	a0001	c0001	t0002	g0001	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02109	hp2	a0001	c0001	t0005	g0005	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02486	hp1	a0001	c0001	t0005	g0005	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02486	hp2	a0001	c0001	t0006	g0001	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02559	hp1	a0001	c0001	t0003	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG02559	hp2	a0001	c0001	t0003	g0002	AFR	ACB	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03471	hp1	a0001	c0001	t0003	g0002	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG03471	hp2	a0001	c0001	t0006	g0001	AFR	MSL	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG06807	hp1	a0001	c0001	t0001	g0003	AFR	USA	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
HG06807	hp2	a0001	c0001	t0003	g0002	AFR	USA	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18955	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA18955	hp2	a0001	c0001	t0004	g0004	EAS	JPT	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20300	hp1	a0001	c0001	t0005	g0005	AFR	USA	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA20300	hp2	a0001	c0001	t0005	g0007	AFR	USA	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA21309	hp1	a0001	c0001	t0002	g0001	AFR	LWK	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
NA21309	hp2	a0001	c0009	t0024	g0005	AFR	LWK	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0002	REF	REF	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0002	REF	REF	CCR5_chr3_46365946_46381206	CCR5	chr3	46365946	46381206

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chr3:46372893	G G	C C	1	a0001 a0001	3	HG01346.hp1 HG02683.hp1 HG03491.hp1 HG01346.hp1 HG02683.hp1 HG03491.hp1	splice_region_variant	LOW	c.-10G>C c.-10G>C		CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2					chr3	46372893
chr3:46372914	A A	T T	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.12A>T c.12A>T	p.Gln4His p.Gln4His	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	66/3358	12/1059	4/352		chr3	46372914
chr3:46372991	C C	G G	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.89C>G c.89C>G	p.Ala30Gly p.Ala30Gly	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	143/3358	89/1059	30/352		chr3	46372991
chr3:46372994	G G	A A	1	a0006 a0006	1	NA18990.hp2 NA18990.hp2	missense_variant	MODERATE	c.92G>A c.92G>A	p.Arg31His p.Arg31His	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	146/3358	92/1059	31/352		chr3	46372994
chr3:46372996	C C	A A	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.94C>A c.94C>A	p.Leu32Ile p.Leu32Ile	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	148/3358	94/1059	32/352		chr3	46372996
chr3:46373005	C C	A A	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.103C>A c.103C>A	p.Pro35Thr p.Pro35Thr	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	157/3358	103/1059	35/352		chr3	46373005
chr3:46373017	C C	A A	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.115C>A c.115C>A	p.Leu39Met p.Leu39Met	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	169/3358	115/1059	39/352		chr3	46373017
chr3:46373027	T T	G G	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.125T>G c.125T>G	p.Ile42Ser p.Ile42Ser	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	179/3358	125/1059	42/352		chr3	46373027
chr3:46373090	G G	T T	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.188G>T c.188G>T	p.Ser63Ile p.Ser63Ile	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	242/3358	188/1059	63/352		chr3	46373090
chr3:46373106	C C	A A	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	stop_gained	HIGH	c.204C>A c.204C>A	p.Tyr68* p.Tyr68*	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	258/3358	204/1059	68/352		chr3	46373106
chr3:46373113	A A	C C	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.211A>C c.211A>C	p.Asn71His p.Asn71His	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	265/3358	211/1059	71/352		chr3	46373113
chr3:46373114	A A	T T	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.212A>T c.212A>T	p.Asn71Ile p.Asn71Ile	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	266/3358	212/1059	71/352		chr3	46373114
chr3:46373115	C C	A A	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.213C>A c.213C>A	p.Asn71Lys p.Asn71Lys	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	267/3358	213/1059	71/352		chr3	46373115
chr3:46373156	T T	C C	1	a0005 a0005	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.254T>C c.254T>C	p.Phe85Ser p.Phe85Ser	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	308/3358	254/1059	85/352		chr3	46373156
chr3:46373218	G G	A A	1	a0009 a0009	1	HG02083.hp1 HG02083.hp1	missense_variant	MODERATE	c.316G>A c.316G>A	p.Gly106Arg p.Gly106Arg	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	370/3358	316/1059	106/352		chr3	46373218
chr3:46373221	C C	T T	1	a0007 a0007	1	HG01934.hp2 HG01934.hp2	missense_variant	MODERATE	c.319C>T c.319C>T	p.Leu107Phe p.Leu107Phe	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	373/3358	319/1059	107/352		chr3	46373221
chr3:46373452	TACAGTCA others(25): Show TACAGTCAGTATCAATTCTGGAAGAATTTCCAG	T T	1	a0004 a0004	4	HG00140.hp1 HG00280.hp1 HG01123.hp1 others(1): Show HG00140.hp1 HG00280.hp1 HG01123.hp1 HG01175.hp2	frameshift_variant	HIGH	c.554_585delGTCAGTAT others(24): Show c.554_585delGTCAGTATCAATTCTGGAAGAATTTCCAGACA	p.Ser185fs p.Ser185fs	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	608/3358	554/1059	185/352	INFO_REALIGN_3_PRIME	chr3	46373452
chr3:46373570	G G	A A	2	a0002 a0005 a0002 a0005	19	HG00673.hp2 NA18941.hp2 NA18942.hp2 others(16): Show HG00673.hp2 NA18941.hp2 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18951.hp2 NA18959.hp2 NA18979.hp1 NA18981.hp2 NA18986.hp1 NA18999.hp1 NA19000.hp2 NA19005.hp1 NA19010.hp2 NA19060.hp2 NA19063.hp2 NA19065.hp2 NA19079.hp1 NA19084.hp2	missense_variant	MODERATE	c.668G>A c.668G>A	p.Arg223Gln p.Arg223Gln	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	722/3358	668/1059	223/352		chr3	46373570
chr3:46373870	G G	T T	1	a0008 a0008	1	HG02004.hp2 HG02004.hp2	missense_variant	MODERATE	c.968G>T c.968G>T	p.Cys323Phe p.Cys323Phe	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1022/3358	968/1059	323/352		chr3	46373870
chr3:46373906	C C	T T	1	a0003 a0003	5	HG01074.hp2 HG02615.hp1 HG02818.hp1 others(2): Show HG01074.hp2 HG02615.hp1 HG02818.hp1 HG02965.hp2 HG03195.hp1	missense_variant	MODERATE	c.1004C>T c.1004C>T	p.Ala335Val p.Ala335Val	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1058/3358	1004/1059	335/352		chr3	46373906

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr3:46372959	C C	G G	1	a0005c0012 a0005c0012	1	NA19060.hp2 NA19060.hp2	synonymous_variant	LOW	c.57C>G c.57C>G	p.Pro19Pro p.Pro19Pro	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	111/3358	57/1059	19/352	chr3	46372959
chr3:46373010	C C	G G	1	a0005c0012 a0005c0012	1	NA19060.hp2 NA19060.hp2	synonymous_variant	LOW	c.108C>G c.108C>G	p.Leu36Leu p.Leu36Leu	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	162/3358	108/1059	36/352	chr3	46373010
chr3:46373058	C C	A A	1	a0005c0012 a0005c0012	1	NA19060.hp2 NA19060.hp2	synonymous_variant	LOW	c.156C>A c.156C>A	p.Ile52Ile p.Ile52Ile	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	210/3358	156/1059	52/352	chr3	46373058
chr3:46373100	C C	T T	1	a0005c0012 a0005c0012	1	NA19060.hp2 NA19060.hp2	synonymous_variant	LOW	c.198C>T c.198C>T	p.Asp66Asp p.Asp66Asp	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	252/3358	198/1059	66/352	chr3	46373100
chr3:46373112	C C	T T	1	a0005c0012 a0005c0012	1	NA19060.hp2 NA19060.hp2	synonymous_variant	LOW	c.210C>T c.210C>T	p.Leu70Leu p.Leu70Leu	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	264/3358	210/1059	70/352	chr3	46373112
chr3:46373127	T T	C C	1	a0001c0006 a0001c0006	1	NA19030.hp1 NA19030.hp1	synonymous_variant	LOW	c.225T>C c.225T>C	p.Ser75Ser p.Ser75Ser	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	279/3358	225/1059	75/352	chr3	46373127
chr3:46373151	C C	A A	1	a0005c0012 a0005c0012	1	NA19060.hp2 NA19060.hp2	synonymous_variant	LOW	c.249C>A c.249C>A	p.Val83Val p.Val83Val	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	303/3358	249/1059	83/352	chr3	46373151
chr3:46373157	C C	T T	1	a0005c0012 a0005c0012	1	NA19060.hp2 NA19060.hp2	synonymous_variant	LOW	c.255C>T c.255C>T	p.Phe85Phe p.Phe85Phe	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	309/3358	255/1059	85/352	chr3	46373157
chr3:46373583	G G	A A	1	a0001c0008 a0001c0008	1	HG02040.hp1 HG02040.hp1	synonymous_variant	LOW	c.681G>A c.681G>A	p.Glu227Glu p.Glu227Glu	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	735/3358	681/1059	227/352	chr3	46373583
chr3:46373902	C C	A A	1	a0001c0009 a0001c0009	1	NA21309.hp2 NA21309.hp2	synonymous_variant	LOW	c.1000C>A c.1000C>A	p.Arg334Arg p.Arg334Arg	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1054/3358	1000/1059	334/352	chr3	46373902

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr3:46373964	C C	T T	1	a0001c0001t0026 a0001c0001t0026	1	HG02970.hp2 HG02970.hp2	3_prime_UTR_variant	MODIFIER	c.3C>T c.3C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	3	chr3	46373964
chr3:46374073	C C	G G	1	a0001c0001t0025 a0001c0001t0025	1	HG00438.hp1 HG00438.hp1	3_prime_UTR_variant	MODIFIER	c.112C>G c.112C>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	112	chr3	46374073
chr3:46374198	A A	G G	1	a0001c0009t0024 a0001c0009t0024	1	NA21309.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.237A>G c.237A>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	237	chr3	46374198
chr3:46374251	G G	A A	2	a0001c0001t0009 a0001c0001t0014 a0001c0001t0009 a0001c0001t0014	3	HG02717.hp2 HG03225.hp2 HG03516.hp1 HG02717.hp2 HG03225.hp2 HG03516.hp1	3_prime_UTR_variant	MODIFIER	c.290G>A c.290G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	290	chr3	46374251
chr3:46374251	G G	C C	1	a0001c0001t0010 a0001c0001t0010	2	HG02040.hp2 HG04228.hp1 HG02040.hp2 HG04228.hp1	3_prime_UTR_variant	MODIFIER	c.290G>C c.290G>C	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	290	chr3	46374251
chr3:46374581	T T	A A	1	a0001c0001t0015 a0001c0001t0015	1	NA18990.hp1 NA18990.hp1	3_prime_UTR_variant	MODIFIER	c.620T>A c.620T>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	620	chr3	46374581
chr3:46374654	G G	A A	6	a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 others(3): Show a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 a0001c0001t0026 a0001c0009t0024 a0007c0011t0016	24	HG01167.hp2 HG01169.hp2 HG01934.hp2 others(21): Show HG01167.hp2 HG01169.hp2 HG01934.hp2 HG02055.hp1 HG02109.hp2 HG02258.hp2 HG02486.hp1 HG02572.hp1 HG02809.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03453.hp1 HG03453.hp2 HG03516.hp2 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.693G>A c.693G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	693	chr3	46374654
chr3:46374725	C C	T T	2	a0001c0001t0004 a0001c0001t0023 a0001c0001t0004 a0001c0001t0023	23	HG01168.hp2 HG01169.hp1 HG01496.hp1 others(20): Show HG01168.hp2 HG01169.hp1 HG01496.hp1 HG01978.hp1 HG01981.hp2 HG02293.hp1 HG02683.hp2 HG02735.hp2 HG03239.hp1 HG03490.hp1 HG03491.hp2 HG03654.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG04115.hp1 NA18612.hp2 NA18952.hp1 NA18954.hp2 NA18955.hp2 NA18984.hp2 NA19080.hp1 NA19084.hp1	3_prime_UTR_variant	MODIFIER	c.764C>T c.764C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	764	chr3	46374725
chr3:46374740	A A	G G	1	a0001c0001t0014 a0001c0001t0014	1	HG03225.hp2 HG03225.hp2	3_prime_UTR_variant	MODIFIER	c.779A>G c.779A>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	779	chr3	46374740
chr3:46374745	G G	A A	3	a0001c0001t0011 a0001c0001t0012 a0007c0011t0016 a0001c0001t0011 a0001c0001t0012 a0007c0011t0016	5	HG01934.hp2 HG02258.hp2 HG03139.hp2 others(2): Show HG01934.hp2 HG02258.hp2 HG03139.hp2 HG03453.hp1 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.784G>A c.784G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	784	chr3	46374745
chr3:46374748	G G	A A	3	a0001c0001t0011 a0001c0001t0012 a0007c0011t0016 a0001c0001t0011 a0001c0001t0012 a0007c0011t0016	5	HG01934.hp2 HG02258.hp2 HG03139.hp2 others(2): Show HG01934.hp2 HG02258.hp2 HG03139.hp2 HG03453.hp1 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.787G>A c.787G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	787	chr3	46374748
chr3:46374821	G G	C C	1	a0001c0001t0017 a0001c0001t0017	1	HG03669.hp1 HG03669.hp1	3_prime_UTR_variant	MODIFIER	c.860G>C c.860G>C	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	860	chr3	46374821
chr3:46374979	G G	T T	12	a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 others(9): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0013 a0001c0001t0015 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0025 a0006c0005t0002 a0008c0010t0002	138	HG00099.hp2 HG00140.hp2 HG00438.hp1 others(135): Show HG00099.hp2 HG00140.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01168.hp1 HG01255.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01975.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp2 HG02698.hp2 HG02738.hp2 HG02886.hp2 HG03017.hp1 HG03471.hp2 HG03490.hp2 HG03688.hp2 HG03704.hp1 HG03834.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19001.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1018G>T c.1018G>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1018	chr3	46374979
chr3:46375005	C C	G G	1	a0001c0001t0023 a0001c0001t0023	1	HG03704.hp2 HG03704.hp2	3_prime_UTR_variant	MODIFIER	c.1044C>G c.1044C>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1044	chr3	46375005
chr3:46375017	C C	T T	1	a0001c0001t0019 a0001c0001t0019	1	HG00621.hp2 HG00621.hp2	3_prime_UTR_variant	MODIFIER	c.1056C>T c.1056C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1056	chr3	46375017
chr3:46375052	G G	C C	1	a0001c0001t0020 a0001c0001t0020	1	HG02015.hp1 HG02015.hp1	3_prime_UTR_variant	MODIFIER	c.1091G>C c.1091G>C	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1091	chr3	46375052
chr3:46375107	G G	T T	1	a0001c0001t0022 a0001c0001t0022	1	NA19043.hp1 NA19043.hp1	3_prime_UTR_variant	MODIFIER	c.1146G>T c.1146G>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1146	chr3	46375107
chr3:46375127	T T	C C	2	a0001c0001t0011 a0001c0001t0012 a0001c0001t0011 a0001c0001t0012	4	HG02258.hp2 HG03139.hp2 HG03453.hp1 others(1): Show HG02258.hp2 HG03139.hp2 HG03453.hp1 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.1166T>C c.1166T>C	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1166	chr3	46375127
chr3:46375195	A A	G G	1	a0001c0001t0013 a0001c0001t0013	2	HG01167.hp1 HG03704.hp1 HG01167.hp1 HG03704.hp1	3_prime_UTR_variant	MODIFIER	c.1234A>G c.1234A>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1234	chr3	46375195
chr3:46375360	A A	C C	1	a0001c0001t0006 a0001c0001t0006	4	HG02486.hp2 HG02572.hp2 HG03471.hp2 others(1): Show HG02486.hp2 HG02572.hp2 HG03471.hp2 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.1399A>C c.1399A>C	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1399	chr3	46375360
chr3:46375578	C C	A A	1	a0001c0001t0008 a0001c0001t0008	3	HG00140.hp2 HG00642.hp1 HG01081.hp2 HG00140.hp2 HG00642.hp1 HG01081.hp2	3_prime_UTR_variant	MODIFIER	c.1617C>A c.1617C>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1617	chr3	46375578
chr3:46375675	G G	A A	1	a0001c0001t0021 a0001c0001t0021	1	HG04204.hp1 HG04204.hp1	3_prime_UTR_variant	MODIFIER	c.1714G>A c.1714G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1714	chr3	46375675
chr3:46375733	C C	T T	1	a0001c0001t0018 a0001c0001t0018	1	NA18998.hp2 NA18998.hp2	3_prime_UTR_variant	MODIFIER	c.1772C>T c.1772C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1772	chr3	46375733
chr3:46375740	C C	G G	1	a0001c0001t0012 a0001c0001t0012	2	HG02258.hp2 HG03453.hp1 HG02258.hp2 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.1779C>G c.1779C>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1779	chr3	46375740
chr3:46375821	G G	T T	21	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(18): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0009t0024 a0006c0005t0002 a0007c0011t0016 a0008c0010t0002	211	HG00099.hp2 HG00140.hp2 HG00438.hp1 others(208): Show HG00099.hp2 HG00140.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01109.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01255.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01891.hp2 HG01934.hp2 HG01975.hp1 HG01978.hp1 HG01981.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02683.hp2 HG02698.hp2 HG02717.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp2 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18952.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp2 NA18984.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19084.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1860G>T c.1860G>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	2/2	1860	chr3	46375821

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr3:46371068	C C	T T	11	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0017 others(8): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0007g0003 a0001c0001t0009g0003 a0001c0001t0014g0003 a0001c0001t0018g0003 a0001c0001t0019g0003 a0002c0002t0001g0003 a0005c0012t0027g0019	107	HG00438.hp2 HG00621.hp1 HG00621.hp2 others(104): Show HG00438.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00673.hp2 HG01070.hp2 HG01106.hp1 HG01106.hp2 HG01175.hp1 HG01192.hp2 HG01256.hp2 HG01257.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01496.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02145.hp2 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp2 HG02735.hp1 HG02886.hp1 HG02922.hp1 HG02970.hp1 HG03225.hp2 HG03239.hp2 HG03491.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp2 HG03834.hp1 HG03927.hp1 HG04184.hp1 HG06807.hp1 NA18747.hp1 NA18940.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18959.hp2 NA18963.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18968.hp1 NA18970.hp2 NA18978.hp2 NA18979.hp1 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18989.hp1 NA18991.hp1 NA18992.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19001.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp2 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19068.hp2 NA19070.hp2 NA19076.hp2 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19084.hp2 NA19085.hp2 NA19088.hp1 NA19090.hp1 NA19091.hp2 NA19240.hp2 NA20805.hp1	intron_variant	MODIFIER	c.-12+80C>T c.-12+80C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371068
chr3:46371217	A A	C C	7	a0001c0001t0005g0005 a0001c0001t0005g0007 a0001c0001t0011g0005 others(4): Show a0001c0001t0005g0005 a0001c0001t0005g0007 a0001c0001t0011g0005 a0001c0001t0012g0005 a0001c0001t0026g0005 a0001c0009t0024g0005 a0007c0011t0016g0005	24	HG01167.hp2 HG01169.hp2 HG01934.hp2 others(21): Show HG01167.hp2 HG01169.hp2 HG01934.hp2 HG02055.hp1 HG02109.hp2 HG02258.hp2 HG02486.hp1 HG02572.hp1 HG02809.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03453.hp1 HG03453.hp2 HG03516.hp2 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.-12+229A>C c.-12+229A>C	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371217
chr3:46371233	A A	G G	1	a0001c0001t0002g0009 a0001c0001t0002g0009	2	NA18973.hp2 NA19086.hp2 NA18973.hp2 NA19086.hp2	intron_variant	MODIFIER	c.-12+245A>G c.-12+245A>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371233
chr3:46371439	A A	G G	7	a0001c0001t0005g0005 a0001c0001t0005g0007 a0001c0001t0011g0005 others(4): Show a0001c0001t0005g0005 a0001c0001t0005g0007 a0001c0001t0011g0005 a0001c0001t0012g0005 a0001c0001t0026g0005 a0001c0009t0024g0005 a0007c0011t0016g0005	24	HG01167.hp2 HG01169.hp2 HG01934.hp2 others(21): Show HG01167.hp2 HG01169.hp2 HG01934.hp2 HG02055.hp1 HG02109.hp2 HG02258.hp2 HG02486.hp1 HG02572.hp1 HG02809.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03453.hp1 HG03453.hp2 HG03516.hp2 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.-12+451A>G c.-12+451A>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371439
chr3:46371546	G G	T T	1	a0003c0003t0001g0015 a0003c0003t0001g0015	1	HG02965.hp2 HG02965.hp2	intron_variant	MODIFIER	c.-12+558G>T c.-12+558G>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371546
chr3:46371633	C C	G G	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG03927.hp2 HG03927.hp2	intron_variant	MODIFIER	c.-12+645C>G c.-12+645C>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371633
chr3:46371719	T T	C C	1	a0001c0001t0002g0010 a0001c0001t0002g0010	1	HG02523.hp1 HG02523.hp1	intron_variant	MODIFIER	c.-12+731T>C c.-12+731T>C	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371719
chr3:46371771	CAG CAG	C C	18	a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 others(15): Show a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0003g0001 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0001t0010g0001 a0001c0001t0013g0001 a0001c0001t0015g0001 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0022g0001 a0001c0001t0025g0001 a0006c0005t0002g0001 a0008c0010t0002g0001	139	HG00099.hp2 HG00140.hp2 HG00438.hp1 others(136): Show HG00099.hp2 HG00140.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01168.hp1 HG01255.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01975.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp2 HG02698.hp2 HG02738.hp2 HG02886.hp2 HG03017.hp1 HG03471.hp2 HG03490.hp2 HG03688.hp2 HG03704.hp1 HG03834.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-12+785_-12+786del others(2): Show c.-12+785_-12+786delGA	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr3	46371771
chr3:46371843	C C	T T	2	a0001c0001t0004g0004 a0001c0001t0023g0004 a0001c0001t0004g0004 a0001c0001t0023g0004	23	HG01168.hp2 HG01169.hp1 HG01496.hp1 others(20): Show HG01168.hp2 HG01169.hp1 HG01496.hp1 HG01978.hp1 HG01981.hp2 HG02293.hp1 HG02683.hp2 HG02735.hp2 HG03239.hp1 HG03490.hp1 HG03491.hp2 HG03654.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG04115.hp1 NA18612.hp2 NA18952.hp1 NA18954.hp2 NA18955.hp2 NA18984.hp2 NA19080.hp1 NA19084.hp1	intron_variant	MODIFIER	c.-12+855C>T c.-12+855C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371843
chr3:46371927	C C	T T	18	a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 others(15): Show a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0003g0001 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0001t0010g0001 a0001c0001t0013g0001 a0001c0001t0015g0001 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0022g0001 a0001c0001t0025g0001 a0006c0005t0002g0001 a0008c0010t0002g0001	139	HG00099.hp2 HG00140.hp2 HG00438.hp1 others(136): Show HG00099.hp2 HG00140.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01168.hp1 HG01255.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01975.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp2 HG02698.hp2 HG02738.hp2 HG02886.hp2 HG03017.hp1 HG03471.hp2 HG03490.hp2 HG03688.hp2 HG03704.hp1 HG03834.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-12+939C>T c.-12+939C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371927
chr3:46371928	G G	A A	1	a0001c0001t0005g0007 a0001c0001t0005g0007	3	HG02809.hp2 NA18522.hp1 NA20300.hp2 HG02809.hp2 NA18522.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-12+940G>A c.-12+940G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46371928
chr3:46372141	G G	A A	1	a0001c0001t0001g0006 a0001c0001t0001g0006	4	HG01070.hp1 HG01071.hp2 HG01074.hp1 others(1): Show HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01099.hp1	intron_variant	MODIFIER	c.-11-751G>A c.-11-751G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372141
chr3:46372252	C C	T T	18	a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 others(15): Show a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0003g0001 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0001t0010g0001 a0001c0001t0013g0001 a0001c0001t0015g0001 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0022g0001 a0001c0001t0025g0001 a0006c0005t0002g0001 a0008c0010t0002g0001	139	HG00099.hp2 HG00140.hp2 HG00438.hp1 others(136): Show HG00099.hp2 HG00140.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01168.hp1 HG01255.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01975.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp2 HG02698.hp2 HG02738.hp2 HG02886.hp2 HG03017.hp1 HG03471.hp2 HG03490.hp2 HG03688.hp2 HG03704.hp1 HG03834.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-11-640C>T c.-11-640C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372252
chr3:46372359	T T	A A	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	HG00639.hp1 HG00639.hp1	intron_variant	MODIFIER	c.-11-533T>A c.-11-533T>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372359
chr3:46372452	C C	T T	1	a0001c0001t0002g0008 a0001c0001t0002g0008	2	NA18947.hp1 NA19005.hp2 NA18947.hp1 NA19005.hp2	intron_variant	MODIFIER	c.-11-440C>T c.-11-440C>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372452
chr3:46372459	G G	A A	18	a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 others(15): Show a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0003g0001 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0001t0010g0001 a0001c0001t0013g0001 a0001c0001t0015g0001 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0022g0001 a0001c0001t0025g0001 a0006c0005t0002g0001 a0008c0010t0002g0001	139	HG00099.hp2 HG00140.hp2 HG00438.hp1 others(136): Show HG00099.hp2 HG00140.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01168.hp1 HG01255.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01975.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp2 HG02698.hp2 HG02738.hp2 HG02886.hp2 HG03017.hp1 HG03471.hp2 HG03490.hp2 HG03688.hp2 HG03704.hp1 HG03834.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-11-433G>A c.-11-433G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372459
chr3:46372528	CACA CACA	C C	19	a0001c0001t0001g0013 a0001c0001t0002g0001 a0001c0001t0002g0008 others(16): Show a0001c0001t0001g0013 a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0003g0001 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0001t0010g0001 a0001c0001t0013g0001 a0001c0001t0015g0001 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0022g0001 a0001c0001t0025g0001 a0006c0005t0002g0001 a0008c0010t0002g0001	140	HG00099.hp2 HG00140.hp2 HG00438.hp1 others(137): Show HG00099.hp2 HG00140.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01168.hp1 HG01255.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01975.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp2 HG02698.hp2 HG02738.hp2 HG02886.hp2 HG03017.hp1 HG03471.hp2 HG03490.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03834.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-11-344_-11-342del others(3): Show c.-11-344_-11-342delCAA	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr3	46372528
chr3:46372544	A A	G G	18	a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 others(15): Show a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0003g0001 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0001t0010g0001 a0001c0001t0013g0001 a0001c0001t0015g0001 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0022g0001 a0001c0001t0025g0001 a0006c0005t0002g0001 a0008c0010t0002g0001	139	HG00099.hp2 HG00140.hp2 HG00438.hp1 others(136): Show HG00099.hp2 HG00140.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01168.hp1 HG01255.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01975.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp2 HG02698.hp2 HG02738.hp2 HG02886.hp2 HG03017.hp1 HG03471.hp2 HG03490.hp2 HG03688.hp2 HG03704.hp1 HG03834.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-11-348A>G c.-11-348A>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372544
chr3:46372573	T T	A A	1	a0001c0001t0001g0017 a0001c0001t0001g0017	1	HG01943.hp1 HG01943.hp1	intron_variant	MODIFIER	c.-11-319T>A c.-11-319T>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372573
chr3:46372618	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	HG03927.hp1 HG03927.hp1	intron_variant	MODIFIER	c.-11-274G>A c.-11-274G>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372618
chr3:46372625	T T	C C	1	a0001c0001t0002g0011 a0001c0001t0002g0011	1	HG02080.hp1 HG02080.hp1	intron_variant	MODIFIER	c.-11-267T>C c.-11-267T>C	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372625
chr3:46372790	G G	T T	7	a0001c0001t0005g0005 a0001c0001t0005g0007 a0001c0001t0011g0005 others(4): Show a0001c0001t0005g0005 a0001c0001t0005g0007 a0001c0001t0011g0005 a0001c0001t0012g0005 a0001c0001t0026g0005 a0001c0009t0024g0005 a0007c0011t0016g0005	24	HG01167.hp2 HG01169.hp2 HG01934.hp2 others(21): Show HG01167.hp2 HG01169.hp2 HG01934.hp2 HG02055.hp1 HG02109.hp2 HG02258.hp2 HG02486.hp1 HG02572.hp1 HG02809.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03453.hp1 HG03453.hp2 HG03516.hp2 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.-11-102G>T c.-11-102G>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372790
chr3:46372858	A A	G G	1	a0001c0001t0002g0012 a0001c0001t0002g0012	1	NA19058.hp2 NA19058.hp2	intron_variant	MODIFIER	c.-11-34A>G c.-11-34A>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372858
chr3:46372866	A A	G G	1	a0005c0012t0027g0019 a0005c0012t0027g0019	1	NA19060.hp2 NA19060.hp2	intron_variant	MODIFIER	c.-11-26A>G c.-11-26A>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372866
chr3:46372868	A A	T T	1	a0005c0012t0027g0019 a0005c0012t0027g0019	1	NA19060.hp2 NA19060.hp2	intron_variant	MODIFIER	c.-11-24A>T c.-11-24A>T	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372868
chr3:46372876	T T	A A	1	a0005c0012t0027g0019 a0005c0012t0027g0019	1	NA19060.hp2 NA19060.hp2	intron_variant	MODIFIER	c.-11-16T>A c.-11-16T>A	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372876
chr3:46372877	T T	G G	1	a0005c0012t0027g0019 a0005c0012t0027g0019	1	NA19060.hp2 NA19060.hp2	intron_variant	MODIFIER	c.-11-15T>G c.-11-15T>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372877
chr3:46372881	T T	G G	1	a0005c0012t0027g0019 a0005c0012t0027g0019	1	NA19060.hp2 NA19060.hp2	intron_variant	MODIFIER	c.-11-11T>G c.-11-11T>G	CCR5	ENSG00000160791.14	transcript	ENST00000292303.5	protein_coding	1/1		chr3	46372881

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JoGo Online Haplotype Explorer CCR5_chr3_46365946_46381206

JoGo Local Haplotype Explorer (on iGV) CCR5_chr3_46365946_46381206

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 12)

TTranscript Level Haplotype Info (Total: 27)

GGenebody Level Haplotype Info (Total: 19)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 12)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 35)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 50)

Haplotype Details by Sample (Haploid Level) (Total: 422)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 20)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 10)

TTranscript Level Haplotype Variants (Exon) (Total: 25)

GGenebody Level Haplotype Variants (Intron) (Total: 28)

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Annotation (Repeats)

Annotation (SNP Array)