JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	2876
ensemblid	ENSG00000233276.9
hgncid	4553
symbol	GPX1
name	glutathione peroxidase 1
refseq_nuc	NM_000581.4
refseq_prot	NP_000572.2
ensembl_nuc	ENST00000419783.3
ensembl_prot	ENSP00000407375.1
mane_status	MANE Select
chr	chr3
start	49357176
end	49358353
strand	-
ver	v1.2
region	chr3:49357176-49358353
region5000	chr3:49352176-49363353
regionname0	GPX1_chr3_49357176_49358353
regionname5000	GPX1_chr3_49352176_49363353

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/1	46	193	41	31	90	5	25	64	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0002	0/0	47	78	20	18	23	8	9	20	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0003	1/0	48	48	25	13	1	5	3	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0004	0/0	46	6	5	0	0	0	1	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0005	0/0	46	1	1	0	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/1	606	192	40	31	90	5	25	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
c0002	0/0	609	78	20	18	23	8	9	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
c0003	1/0	612	48	25	13	1	5	3	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
c0004	0/0	606	6	5	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
c0005	0/0	606	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
c0006	0/0	606	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	288	240	73	44	82	10	29	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
t0002	0/0	288	75	18	18	23	8	8	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
t0003	0/0	288	7	0	0	7	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
t0004	0/0	288	2	0	0	2	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
t0005	0/0	288	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
t0006	0/0	288	1	0	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	180	37	31	81	5	25	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0002	0/0	75	18	18	23	8	8	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0003	1/0	46	24	13	1	4	3	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0004	0/0	7	0	0	7	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0005	0/0	6	5	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0006	0/0	2	2	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0007	0/0	2	2	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0008	0/0	2	0	0	2	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0009	0/0	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0010	0/0	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0011	0/0	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0012	0/0	1	0	0	0	1	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0013	0/0	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
g0014	0/0	1	0	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/1	606	192	40	31	90	5	25	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0001c0006	0/0	606	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0002c0002	0/0	609	78	20	18	23	8	9	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0003c0003	1/0	612	48	25	13	1	5	3	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0004c0004	0/0	606	6	5	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0005c0005	0/0	606	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	893	183	40	31	81	5	25	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0001c0001t0003	0/0	893	7	0	0	7	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0001c0001t0004	0/0	893	2	0	0	2	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0001c0006t0001	0/0	893	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0002c0002t0001	0/0	896	2	2	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0002c0002t0002	0/0	896	75	18	18	23	8	8	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0002c0002t0006	0/0	896	1	0	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0003c0003t0001	1/0	899	47	24	13	1	5	3	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0003c0003t0005	0/0	899	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0004c0004t0001	0/0	893	6	5	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353
a0005c0005t0001	0/0	893	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	copy fasta	chr3	49352176	49363353

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	180	37	31	81	5	25	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0001c0001t0001g0006	0/0	2	2	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0001c0001t0001g0010	0/0	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0001c0001t0003g0004	0/0	7	0	0	7	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0001c0001t0004g0008	0/0	2	0	0	2	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0001c0006t0001g0011	0/0	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0002c0002t0001g0007	0/0	2	2	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0002c0002t0002g0002	0/0	75	18	18	23	8	8	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0002c0002t0006g0014	0/0	1	0	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0003c0003t0001g0003	1/0	46	24	13	1	4	3	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0003c0003t0001g0012	0/0	1	0	0	0	1	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0003c0003t0005g0013	0/0	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0004c0004t0001g0005	0/0	6	5	0	0	0	1	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
a0005c0005t0001g0009	0/0	1	1	0	0	0	0	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0002	c0002	t0002	g0002	EUR	GBR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00140	hp1	a0003	c0003	t0001	g0003	EUR	GBR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00140	hp2	a0002	c0002	t0002	g0002	EUR	GBR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00280	hp1	a0002	c0002	t0002	g0002	EUR	FIN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00323	hp2	a0002	c0002	t0002	g0002	EUR	FIN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00544	hp2	a0002	c0002	t0002	g0002	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00621	hp1	a0001	c0001	t0004	g0008	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00639	hp1	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00642	hp2	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00733	hp1	a0003	c0003	t0001	g0003	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00733	hp2	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00735	hp1	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00738	hp1	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG00738	hp2	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01069	hp1	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01069	hp2	a0003	c0003	t0001	g0003	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01070	hp1	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01070	hp2	a0003	c0003	t0001	g0003	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01071	hp1	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01071	hp2	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01074	hp1	a0003	c0003	t0001	g0003	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01081	hp2	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01109	hp2	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01167	hp2	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01168	hp1	a0002	c0002	t0002	g0002	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01175	hp2	a0003	c0003	t0001	g0003	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01192	hp1	a0003	c0003	t0001	g0003	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01243	hp2	a0003	c0003	t0001	g0003	AMR	PUR	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01255	hp1	a0003	c0003	t0001	g0003	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01257	hp2	a0002	c0002	t0002	g0002	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01258	hp2	a0002	c0002	t0002	g0002	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01261	hp1	a0003	c0003	t0001	g0003	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01261	hp2	a0003	c0003	t0001	g0003	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01433	hp1	a0003	c0003	t0001	g0003	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01433	hp2	a0002	c0002	t0002	g0002	AMR	CLM	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01515	hp2	a0002	c0002	t0002	g0002	EUR	IBS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01516	hp1	a0003	c0003	t0001	g0003	EUR	IBS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01516	hp2	a0002	c0002	t0002	g0002	EUR	IBS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01517	hp1	a0003	c0003	t0001	g0003	EUR	IBS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01517	hp2	a0002	c0002	t0002	g0002	EUR	IBS	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01884	hp1	a0002	c0002	t0001	g0007	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01884	hp2	a0003	c0003	t0001	g0003	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01891	hp1	a0002	c0002	t0002	g0002	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01934	hp2	a0002	c0002	t0002	g0002	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01981	hp1	a0003	c0003	t0001	g0003	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02027	hp1	a0001	c0001	t0003	g0004	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02027	hp2	a0003	c0003	t0001	g0003	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02055	hp1	a0002	c0002	t0002	g0002	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02145	hp1	a0002	c0002	t0002	g0002	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02257	hp2	a0003	c0003	t0001	g0003	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02280	hp1	a0002	c0002	t0002	g0002	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02300	hp1	a0003	c0003	t0001	g0003	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02451	hp2	a0004	c0004	t0001	g0005	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02572	hp1	a0001	c0001	t0001	g0006	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02602	hp1	a0002	c0002	t0002	g0002	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02615	hp1	a0001	c0001	t0001	g0010	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02615	hp2	a0002	c0002	t0002	g0002	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02622	hp1	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02647	hp1	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02647	hp2	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02683	hp1	a0004	c0004	t0001	g0005	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02698	hp2	a0002	c0002	t0002	g0002	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02723	hp1	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02723	hp2	a0002	c0002	t0001	g0007	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02735	hp2	a0002	c0002	t0002	g0002	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02738	hp2	a0002	c0002	t0002	g0002	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02809	hp2	a0002	c0002	t0002	g0002	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02818	hp1	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02818	hp2	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02886	hp2	a0002	c0002	t0002	g0002	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02895	hp1	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02895	hp2	a0004	c0004	t0001	g0005	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02896	hp2	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02897	hp2	a0004	c0004	t0001	g0005	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02922	hp1	a0001	c0001	t0001	g0006	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02965	hp1	a0003	c0003	t0001	g0003	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02965	hp2	a0002	c0002	t0002	g0002	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02970	hp1	a0002	c0002	t0002	g0002	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02976	hp1	a0002	c0002	t0002	g0002	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02976	hp2	a0003	c0003	t0001	g0003	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03098	hp1	a0003	c0003	t0001	g0003	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03130	hp1	a0004	c0004	t0001	g0005	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03130	hp2	a0002	c0002	t0002	g0002	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03195	hp1	a0003	c0003	t0001	g0003	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03225	hp2	a0003	c0003	t0001	g0003	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03239	hp1	a0003	c0003	t0001	g0003	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03453	hp2	a0001	c0006	t0001	g0011	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03486	hp1	a0002	c0002	t0002	g0002	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03516	hp1	a0003	c0003	t0001	g0003	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03540	hp2	a0003	c0003	t0001	g0003	AFR	GWD	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03579	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03654	hp1	a0002	c0002	t0006	g0014	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03688	hp1	a0003	c0003	t0001	g0003	SAS	STU	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03831	hp1	a0002	c0002	t0002	g0002	SAS	BEB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03831	hp2	a0002	c0002	t0002	g0002	SAS	BEB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03834	hp1	a0003	c0003	t0001	g0003	SAS	BEB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03834	hp2	a0002	c0002	t0002	g0002	SAS	BEB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03942	hp1	a0002	c0002	t0002	g0002	SAS	BEB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18522	hp1	a0002	c0002	t0002	g0002	AFR	YRI	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18612	hp2	a0002	c0002	t0002	g0002	EAS	CHB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18747	hp2	a0002	c0002	t0002	g0002	EAS	CHB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18906	hp1	a0002	c0002	t0002	g0002	AFR	YRI	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18906	hp2	a0003	c0003	t0001	g0003	AFR	YRI	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18940	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18951	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18952	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18954	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18963	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18964	hp2	a0001	c0001	t0004	g0008	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18973	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18979	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18983	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18984	hp1	a0001	c0001	t0003	g0004	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18991	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18999	hp1	a0001	c0001	t0003	g0004	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19000	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19003	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19010	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19012	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19030	hp1	a0003	c0003	t0001	g0003	AFR	LWK	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19030	hp2	a0003	c0003	t0001	g0003	AFR	LWK	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19043	hp1	a0003	c0003	t0001	g0003	AFR	LWK	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19043	hp2	a0001	c0001	t0001	g0001	AFR	LWK	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19062	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19063	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19065	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19066	hp1	a0001	c0001	t0003	g0004	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19070	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19079	hp1	a0001	c0001	t0003	g0004	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19079	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19082	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19088	hp1	a0001	c0001	t0003	g0004	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19090	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19091	hp1	a0001	c0001	t0003	g0004	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20129	hp1	a0003	c0003	t0001	g0003	AFR	ASW	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20129	hp2	a0002	c0002	t0002	g0002	AFR	ASW	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20752	hp1	a0003	c0003	t0001	g0003	EUR	TSI	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20752	hp2	a0002	c0002	t0002	g0002	EUR	TSI	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20805	hp1	a0003	c0003	t0001	g0012	EUR	TSI	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02109	hp1	a0002	c0002	t0002	g0002	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02109	hp2	a0003	c0003	t0001	g0003	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02486	hp1	a0004	c0004	t0001	g0005	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03471	hp1	a0003	c0003	t0001	g0003	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG06807	hp1	a0002	c0002	t0002	g0002	AFR	USA	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20300	hp1	a0002	c0002	t0002	g0002	AFR	USA	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA21309	hp1	a0005	c0005	t0001	g0009	AFR	LWK	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
NA21309	hp2	a0003	c0003	t0005	g0013	AFR	LWK	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353
homoSapiens_grch38	hp1	a0003	c0003	t0001	g0003	REF	REF	GPX1_chr3_49352176_49363353	GPX1	chr3	49352176	49363353

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr3:49357401	G G	A A	1	a0002 a0002	78	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(75): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp2 HG00544.hp2 HG00639.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01109.hp2 HG01167.hp2 HG01168.hp1 HG01257.hp2 HG01258.hp2 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp1 HG02280.hp1 HG02602.hp1 HG02615.hp2 HG02698.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03130.hp2 HG03486.hp1 HG03654.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18940.hp1 NA18951.hp2 NA18952.hp2 NA18954.hp2 NA18963.hp1 NA18973.hp1 NA18979.hp2 NA18983.hp1 NA18991.hp2 NA19000.hp2 NA19003.hp2 NA19010.hp1 NA19012.hp2 NA19062.hp2 NA19063.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp2 NA19082.hp1 NA19090.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp2	missense_variant	MODERATE	c.599C>T c.599C>T	p.Pro200Leu p.Pro200Leu	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	2/2	674/899	599/612	200/203	chr3	49357401
chr3:49357420	C C	T T	1	a0004 a0004	6	HG02451.hp2 HG02486.hp1 HG02683.hp1 others(3): Show HG02451.hp2 HG02486.hp1 HG02683.hp1 HG02895.hp2 HG02897.hp2 HG03130.hp1	missense_variant	MODERATE	c.580G>A c.580G>A	p.Ala194Thr p.Ala194Thr	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	2/2	655/899	580/612	194/203	chr3	49357420
chr3:49358211	G G	T T	1	a0005 a0005	1	NA21309.hp1 NA21309.hp1	missense_variant	MODERATE	c.68C>A c.68C>A	p.Pro23Gln p.Pro23Gln	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	143/899	68/612	23/203	chr3	49358211
chr3:49358240	GGCC GGCC	G G	1	a0002 a0002	78	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(75): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp2 HG00544.hp2 HG00639.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01109.hp2 HG01167.hp2 HG01168.hp1 HG01257.hp2 HG01258.hp2 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp1 HG02280.hp1 HG02602.hp1 HG02615.hp2 HG02698.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03130.hp2 HG03486.hp1 HG03654.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18940.hp1 NA18951.hp2 NA18952.hp2 NA18954.hp2 NA18963.hp1 NA18973.hp1 NA18979.hp2 NA18983.hp1 NA18991.hp2 NA19000.hp2 NA19003.hp2 NA19010.hp1 NA19012.hp2 NA19062.hp2 NA19063.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp2 NA19082.hp1 NA19090.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp2	disruptive_inframe_deletion	MODERATE	c.36_38delGGC c.36_38delGGC	p.Ala13del p.Ala13del	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	113/899	36/612	12/203	chr3	49358240
chr3:49358240	GGCCGCC GGCCGCC	G G	3	a0001 a0004 a0005 a0001 a0004 a0005	200	HG00099.hp2 HG00280.hp2 HG00323.hp1 others(197): Show HG00099.hp2 HG00280.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00735.hp2 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01167.hp1 HG01168.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp1 NA18956.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18979.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18995.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19003.hp1 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19082.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	disruptive_inframe_deletion	MODERATE	c.33_38delGGCGGC c.33_38delGGCGGC	p.Ala12_Ala13del p.Ala12_Ala13del	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	113/899	33/612	11/203	chr3	49358240
chr3:49358265	C C	G G	1	a0004 a0004	6	HG02451.hp2 HG02486.hp1 HG02683.hp1 others(3): Show HG02451.hp2 HG02486.hp1 HG02683.hp1 HG02895.hp2 HG02897.hp2 HG03130.hp1	missense_variant	MODERATE	c.14G>C c.14G>C	p.Arg5Pro p.Arg5Pro	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	89/899	14/612	5/203	chr3	49358265

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr3:49358048	C C	A A	1	a0001c0006 a0001c0006	1	HG03453.hp2 HG03453.hp2	synonymous_variant	LOW	c.231G>T c.231G>T	p.Pro77Pro p.Pro77Pro	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	306/899	231/612	77/203			chr3	49358048

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr3:49357203	T T	C C	1	a0001c0001t0003 a0001c0001t0003	7	HG02027.hp1 NA18984.hp1 NA18999.hp1 others(4): Show HG02027.hp1 NA18984.hp1 NA18999.hp1 NA19066.hp1 NA19079.hp1 NA19088.hp1 NA19091.hp1	3_prime_UTR_variant	MODIFIER	c.185A>G c.185A>G	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	2/2	185	chr3	49357203
chr3:49358319	G G	T T	1	a0002c0002t0006 a0002c0002t0006	1	HG03654.hp1 HG03654.hp1	5_prime_UTR_variant	MODIFIER	c.-41C>A c.-41C>A	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	41	chr3	49358319
chr3:49358323	T T	C C	1	a0003c0003t0005 a0003c0003t0005	1	NA21309.hp2 NA21309.hp2	5_prime_UTR_variant	MODIFIER	c.-45A>G c.-45A>G	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	45	chr3	49358323
chr3:49358324	G G	A A	2	a0002c0002t0002 a0002c0002t0006 a0002c0002t0002 a0002c0002t0006	76	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(73): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp2 HG00544.hp2 HG00639.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01109.hp2 HG01167.hp2 HG01168.hp1 HG01257.hp2 HG01258.hp2 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp1 HG02280.hp1 HG02602.hp1 HG02615.hp2 HG02698.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03130.hp2 HG03486.hp1 HG03654.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18940.hp1 NA18951.hp2 NA18952.hp2 NA18954.hp2 NA18963.hp1 NA18973.hp1 NA18979.hp2 NA18983.hp1 NA18991.hp2 NA19000.hp2 NA19003.hp2 NA19010.hp1 NA19012.hp2 NA19062.hp2 NA19063.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp2 NA19082.hp1 NA19090.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp2	5_prime_UTR_variant	MODIFIER	c.-46C>T c.-46C>T	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	46	chr3	49358324
chr3:49358333	G G	A A	1	a0001c0001t0004 a0001c0001t0004	2	HG00621.hp1 NA18964.hp2 HG00621.hp1 NA18964.hp2	5_prime_UTR_variant	MODIFIER	c.-55C>T c.-55C>T	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/2	55	chr3	49358333

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr3:49357762	G G	A A	1	a0003c0003t0001g0012 a0003c0003t0001g0012	1	NA20805.hp1 NA20805.hp1	intron_variant	MODIFIER	c.253-15C>T c.253-15C>T	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/1	chr3	49357762
chr3:49357918	TA TA	T T	2	a0001c0001t0001g0006 a0005c0005t0001g0009 a0001c0001t0001g0006 a0005c0005t0001g0009	3	HG02572.hp1 HG02922.hp1 NA21309.hp1 HG02572.hp1 HG02922.hp1 NA21309.hp1	intron_variant	MODIFIER	c.252+108delT c.252+108delT	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/1	chr3	49357918
chr3:49357945	A A	ACGGCACC others(14): Show ACGGCACCCACCAGCACACCGC	1	a0004c0004t0001g0005 a0004c0004t0001g0005	6	HG02451.hp2 HG02486.hp1 HG02683.hp1 others(3): Show HG02451.hp2 HG02486.hp1 HG02683.hp1 HG02895.hp2 HG02897.hp2 HG03130.hp1	intron_variant	MODIFIER	c.252+61_252+81dupGC others(19): Show c.252+61_252+81dupGCGGTGTGCTGGTGGGTGCCG	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/1	chr3	49357945
chr3:49357950	A A	ACCCACCA others(13): Show ACCCACCAGCACACCGCCGGC	1	a0001c0001t0001g0010 a0001c0001t0001g0010	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.252+57_252+76dupGC others(18): Show c.252+57_252+76dupGCCGGCGGTGTGCTGGTGGG	GPX1	ENSG00000233276.9	transcript	ENST00000419783.3	protein_coding	1/1	chr3	49357950

Search by Genic region

Search

🧬 JoGo Online Haplotype Explorer GPX1_chr3_49352176_49363353

JoGo Local Haplotype Explorer (on iGV) GPX1_chr3_49352176_49363353

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 6)

TTranscript Level Haplotype Info (Total: 6)

GGenebody Level Haplotype Info (Total: 14)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 6)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 11)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 14)

Haplotype Details by Sample (Haploid Level) (Total: 326)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 6)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 5)

GGenebody Level Haplotype Variants (Intron) (Total: 4)

External Link

Annotation (Repeats)

Annotation (SNP Array)