Joint Open Genome and Omics Platform (JoGo)

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geneid	280658
ensemblid	ENSG00000187754.9
hgncid	19653
symbol	SSX7
name	SSX family member 7
refseq_nuc	NM_173358.2
refseq_prot	NP_775494.1
ensembl_nuc	ENST00000298181.6
ensembl_prot	ENSP00000298181.5
mane_status	MANE Select
chr	chrX
start	52644061
end	52654900
strand	-
ver	v1.2
region	chrX:52644061-52654900
region5000	chrX:52639061-52659900
regionname0	SSX7_chrX_52644061_52654900
regionname5000	SSX7_chrX_52639061_52659900

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	188	277	73	49	118	11	24	86	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0002	0/0	188	16	0	5	7	2	2	6	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0003	0/0	188	5	0	4	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0004	0/0	188	2	0	0	0	0	2	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0005	0/0	98	1	0	0	1	0	0	1	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0006	0/0	188	1	1	0	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0007	0/0	98	1	0	0	1	0	0	1	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0008	0/0	188	1	0	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0009	0/0	188	1	0	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	567	277	73	49	118	11	24	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
c0002	0/0	567	16	0	5	7	2	2	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
c0003	0/0	567	5	0	4	0	0	1	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
c0004	0/0	567	2	0	0	0	0	2	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
c0005	0/0	567	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
c0006	0/0	566	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
c0007	0/0	567	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
c0008	0/0	566	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
c0009	0/0	567	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	776	294	69	59	124	11	30	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0002	0/0	778	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0003	0/0	774	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0004	0/0	776	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0005	0/0	776	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0006	1/0	774	1	0	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0007	0/0	779	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0008	0/0	772	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0009	0/0	776	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
t0010	0/0	776	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	85	15	19	38	3	10	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0002	0/0	45	11	6	21	2	5	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0003	0/0	12	0	3	6	3	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0004	0/0	11	0	5	3	1	2	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0005	0/0	9	8	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0006	0/0	8	6	2	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0007	0/0	7	0	5	2	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0008	0/0	5	0	1	2	0	2	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0009	0/0	4	0	0	3	1	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0010	0/0	4	1	2	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0011	0/0	3	3	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0012	0/0	3	0	0	3	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0013	0/0	3	1	0	2	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0014	0/0	3	0	3	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0015	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0016	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0017	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0018	0/0	2	0	2	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0019	0/0	2	0	0	2	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0020	0/0	2	0	1	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0021	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0022	0/0	2	0	0	2	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0023	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0024	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0025	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0026	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0027	0/0	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0028	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0029	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0030	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0031	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0032	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0033	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0034	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0035	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0036	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0037	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0038	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0039	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0040	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0041	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0042	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0043	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0044	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0045	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0046	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0047	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0048	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0049	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0050	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0051	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0052	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0053	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0054	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0055	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0056	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0057	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0058	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0059	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0060	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0061	0/0	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0062	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0063	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0064	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0065	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0066	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0067	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0068	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0069	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0070	0/1	1	0	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0071	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0072	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0073	0/0	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0074	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0075	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0076	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0077	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0078	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0079	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0080	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0081	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0082	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0083	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0084	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0085	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0086	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0087	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0088	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0089	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0090	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0091	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0092	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0093	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0094	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0095	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0096	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0097	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0098	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0099	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0100	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0101	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0102	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0103	1/0	1	0	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0104	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0105	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0106	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0107	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
g0108	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	567	277	73	49	118	11	24	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0002c0002	0/0	567	16	0	5	7	2	2	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0003c0003	0/0	567	5	0	4	0	0	1	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0004c0004	0/0	567	2	0	0	0	0	2	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0005c0006	0/0	566	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0006c0007	0/0	567	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0007c0008	0/0	566	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0008c0009	0/0	567	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0009c0005	0/0	567	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	1342	267	68	49	115	10	24	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0001c0001t0002	0/0	1344	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0001c0001t0003	0/0	1340	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0001c0001t0004	0/0	1342	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0001c0001t0005	0/0	1342	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0001c0001t0006	1/0	1340	1	0	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0001c0001t0007	0/0	1345	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0001c0001t0008	0/0	1338	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0001c0001t0009	0/0	1342	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0002c0002t0001	0/0	1342	15	0	5	7	1	2	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0002c0002t0010	0/0	1342	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0003c0003t0001	0/0	1342	5	0	4	0	0	1	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0004c0004t0001	0/0	1342	2	0	0	0	0	2	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0005c0006t0001	0/0	1341	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0006c0007t0001	0/0	1342	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0007c0008t0001	0/0	1341	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0008c0009t0001	0/0	1342	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900
a0009c0005t0001	0/0	1342	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	copy fasta	chrX	52639061	52659900

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	85	15	19	38	3	10	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0002	0/0	45	11	6	21	2	5	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0003	0/0	12	0	3	6	3	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0005	0/0	9	8	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0006	0/0	8	6	2	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0007	0/0	7	0	5	2	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0008	0/0	5	0	1	2	0	2	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0009	0/0	4	0	0	3	1	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0010	0/0	4	1	2	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0011	0/0	3	3	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0012	0/0	3	0	0	3	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0013	0/0	3	1	0	2	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0016	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0017	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0018	0/0	2	0	2	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0019	0/0	2	0	0	2	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0020	0/0	2	0	1	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0021	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0022	0/0	2	0	0	2	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0025	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0026	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0027	0/0	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0028	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0029	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0030	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0032	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0033	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0034	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0036	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0037	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0038	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0039	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0042	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0043	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0045	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0046	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0047	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0050	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0051	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0052	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0053	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0054	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0056	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0057	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0058	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0059	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0060	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0062	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0063	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0064	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0065	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0066	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0067	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0068	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0069	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0070	0/1	1	0	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0071	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0072	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0074	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0075	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0077	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0078	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0079	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0081	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0082	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0083	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0084	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0085	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0086	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0087	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0088	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0090	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0094	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0095	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0097	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0098	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0100	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0101	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0102	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0104	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0105	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0001g0106	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0002g0015	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0003g0023	0/0	2	2	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0004g0024	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0005g0073	0/0	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0006g0103	1/0	1	0	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0007g0091	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0008g0096	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0001c0001t0009g0092	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0002c0002t0001g0004	0/0	11	0	5	3	1	2	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0002c0002t0001g0035	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0002c0002t0001g0040	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0002c0002t0001g0044	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0002c0002t0001g0089	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0002c0002t0010g0061	0/0	1	0	0	0	1	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0003c0003t0001g0014	0/0	3	0	3	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0003c0003t0001g0107	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0003c0003t0001g0108	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0004c0004t0001g0041	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0004c0004t0001g0093	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0005c0006t0001g0099	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0006c0007t0001g0055	0/0	1	1	0	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0007c0008t0001g0048	0/0	1	0	0	1	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0008c0009t0001g0080	0/0	1	0	1	0	0	0	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
a0009c0005t0001g0049	0/0	1	0	0	0	0	1	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0002	EUR	GBR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00099	hp2	a0001	c0001	t0001	g0027	EUR	GBR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00280	hp1	a0002	c0002	t0010	g0061	EUR	FIN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00323	hp1	a0001	c0001	t0001	g0009	EUR	FIN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00408	hp2	a0001	c0001	t0001	g0002	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00438	hp1	a0001	c0001	t0001	g0003	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00544	hp1	a0001	c0001	t0001	g0087	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00544	hp2	a0001	c0001	t0001	g0013	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00558	hp2	a0001	c0001	t0009	g0092	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00597	hp1	a0001	c0001	t0001	g0074	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00597	hp2	a0001	c0001	t0001	g0002	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00609	hp1	a0001	c0001	t0001	g0019	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00621	hp1	a0001	c0001	t0001	g0068	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00639	hp1	a0002	c0002	t0001	g0004	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00642	hp1	a0003	c0003	t0001	g0014	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00735	hp2	a0001	c0001	t0001	g0002	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00738	hp1	a0001	c0001	t0001	g0077	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00741	hp1	a0002	c0002	t0001	g0004	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG00741	hp2	a0008	c0009	t0001	g0080	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01069	hp1	a0001	c0001	t0001	g0020	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01070	hp1	a0001	c0001	t0001	g0018	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01071	hp1	a0001	c0001	t0001	g0007	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01074	hp1	a0001	c0001	t0001	g0018	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01081	hp1	a0001	c0001	t0001	g0006	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01081	hp2	a0003	c0003	t0001	g0014	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01099	hp1	a0001	c0001	t0001	g0051	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01109	hp1	a0001	c0001	t0001	g0010	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01167	hp1	a0001	c0001	t0001	g0002	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01168	hp2	a0003	c0003	t0001	g0108	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01169	hp2	a0001	c0001	t0001	g0002	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01175	hp1	a0001	c0001	t0001	g0003	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01175	hp2	a0003	c0003	t0001	g0014	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01243	hp1	a0001	c0001	t0001	g0006	AMR	PUR	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01255	hp1	a0001	c0001	t0001	g0030	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01256	hp1	a0001	c0001	t0001	g0037	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01257	hp1	a0001	c0001	t0001	g0078	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01257	hp2	a0001	c0001	t0001	g0057	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01258	hp1	a0001	c0001	t0001	g0007	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01261	hp1	a0001	c0001	t0001	g0010	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01346	hp1	a0001	c0001	t0001	g0003	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01346	hp2	a0002	c0002	t0001	g0004	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01358	hp1	a0002	c0002	t0001	g0004	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01361	hp1	a0002	c0002	t0001	g0004	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01361	hp2	a0001	c0001	t0001	g0003	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01433	hp1	a0001	c0001	t0001	g0072	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01496	hp1	a0001	c0001	t0001	g0002	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01496	hp2	a0001	c0001	t0001	g0002	AMR	CLM	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01515	hp1	a0001	c0001	t0001	g0003	EUR	IBS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01516	hp1	a0002	c0002	t0001	g0004	EUR	IBS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01517	hp1	a0001	c0001	t0001	g0003	EUR	IBS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01517	hp2	a0001	c0001	t0001	g0003	EUR	IBS	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01884	hp1	a0001	c0001	t0002	g0015	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01884	hp2	a0001	c0001	t0001	g0056	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01928	hp1	a0001	c0001	t0001	g0007	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01934	hp1	a0001	c0001	t0001	g0005	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01978	hp1	a0001	c0001	t0001	g0008	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01981	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02004	hp1	a0001	c0001	t0001	g0007	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02015	hp1	a0001	c0001	t0001	g0010	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02055	hp1	a0001	c0001	t0001	g0002	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02071	hp1	a0001	c0001	t0001	g0076	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02074	hp1	a0002	c0002	t0001	g0004	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02083	hp1	a0001	c0001	t0001	g0002	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02132	hp1	a0001	c0001	t0001	g0003	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02135	hp1	a0001	c0001	t0001	g0082	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02145	hp1	a0001	c0001	t0001	g0002	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02148	hp1	a0001	c0001	t0001	g0007	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02165	hp1	a0001	c0001	t0001	g0003	EAS	CDX	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02257	hp1	a0001	c0001	t0001	g0063	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02258	hp1	a0001	c0001	t0001	g0028	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02280	hp2	a0001	c0001	t0001	g0005	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02451	hp1	a0001	c0001	t0001	g0002	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02451	hp2	a0001	c0001	t0001	g0021	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02523	hp2	a0001	c0001	t0004	g0024	EAS	KHV	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02572	hp1	a0001	c0001	t0001	g0081	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02602	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02615	hp1	a0001	c0001	t0001	g0006	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02615	hp2	a0001	c0001	t0001	g0083	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02622	hp1	a0001	c0001	t0001	g0016	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02630	hp1	a0001	c0001	t0001	g0011	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02630	hp2	a0001	c0001	t0001	g0046	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02683	hp1	a0001	c0001	t0001	g0097	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02683	hp2	a0001	c0001	t0001	g0050	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02717	hp1	a0001	c0001	t0001	g0005	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02723	hp2	a0001	c0001	t0001	g0079	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02735	hp1	a0004	c0004	t0001	g0093	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02738	hp1	a0001	c0001	t0001	g0086	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02809	hp1	a0001	c0001	t0001	g0029	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02809	hp2	a0001	c0001	t0001	g0021	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02818	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02886	hp1	a0001	c0001	t0001	g0047	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02886	hp2	a0001	c0001	t0001	g0002	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02895	hp1	a0001	c0001	t0001	g0006	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02896	hp1	a0006	c0007	t0001	g0055	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02896	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02922	hp1	a0001	c0001	t0001	g0002	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02922	hp2	a0001	c0001	t0001	g0002	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02965	hp1	a0001	c0001	t0001	g0002	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02970	hp1	a0001	c0001	t0001	g0085	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02970	hp2	a0001	c0001	t0001	g0017	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02976	hp1	a0001	c0001	t0001	g0005	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02976	hp2	a0001	c0001	t0001	g0011	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03017	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03041	hp1	a0001	c0001	t0001	g0016	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03041	hp2	a0001	c0001	t0001	g0006	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03098	hp1	a0001	c0001	t0001	g0033	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03139	hp1	a0001	c0001	t0001	g0006	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03209	hp1	a0001	c0001	t0001	g0005	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03225	hp1	a0001	c0001	t0001	g0006	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03453	hp1	a0001	c0001	t0001	g0032	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03453	hp2	a0001	c0001	t0001	g0006	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03486	hp1	a0001	c0001	t0001	g0005	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03486	hp2	a0001	c0001	t0001	g0002	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03490	hp1	a0001	c0001	t0001	g0094	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03540	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03579	hp1	a0001	c0001	t0003	g0023	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03654	hp1	a0001	c0001	t0001	g0045	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03669	hp1	a0001	c0001	t0001	g0054	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03669	hp2	a0001	c0001	t0001	g0002	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03704	hp1	a0003	c0003	t0001	g0107	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03704	hp2	a0002	c0002	t0001	g0004	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03710	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03927	hp1	a0009	c0005	t0001	g0049	SAS	BEB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03927	hp2	a0001	c0001	t0001	g0008	SAS	BEB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG04184	hp2	a0004	c0004	t0001	g0041	SAS	BEB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG04199	hp1	a0001	c0001	t0001	g0062	SAS	STU	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG04204	hp1	a0001	c0001	t0001	g0008	SAS	STU	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG04228	hp1	a0002	c0002	t0001	g0004	SAS	STU	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18522	hp1	a0001	c0001	t0003	g0023	AFR	YRI	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18612	hp1	a0001	c0001	t0001	g0002	EAS	CHB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18906	hp1	a0001	c0001	t0001	g0005	AFR	YRI	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18906	hp2	a0001	c0001	t0001	g0002	AFR	YRI	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18940	hp1	a0001	c0001	t0001	g0013	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18941	hp2	a0001	c0001	t0001	g0008	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18942	hp1	a0001	c0001	t0001	g0007	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18942	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18943	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18944	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18945	hp1	a0002	c0002	t0001	g0044	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18948	hp1	a0001	c0001	t0001	g0009	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18949	hp1	a0001	c0001	t0001	g0043	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18949	hp2	a0001	c0001	t0001	g0067	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18950	hp2	a0001	c0001	t0001	g0071	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18951	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18952	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18953	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18956	hp1	a0001	c0001	t0001	g0065	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18956	hp2	a0007	c0008	t0001	g0048	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18962	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18965	hp1	a0001	c0001	t0001	g0012	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18967	hp1	a0001	c0001	t0001	g0095	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18968	hp2	a0001	c0001	t0001	g0012	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18971	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18974	hp1	a0002	c0002	t0001	g0040	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18975	hp2	a0002	c0002	t0001	g0004	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18977	hp1	a0001	c0001	t0001	g0034	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18979	hp1	a0001	c0001	t0001	g0039	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18979	hp2	a0001	c0001	t0001	g0012	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18980	hp1	a0001	c0001	t0001	g0009	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18980	hp2	a0002	c0002	t0001	g0089	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18985	hp1	a0001	c0001	t0001	g0075	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18986	hp1	a0001	c0001	t0001	g0090	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18987	hp1	a0001	c0001	t0001	g0042	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18988	hp1	a0001	c0001	t0001	g0059	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18990	hp1	a0001	c0001	t0001	g0104	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18994	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18995	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18999	hp1	a0001	c0001	t0001	g0020	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18999	hp2	a0001	c0001	t0001	g0058	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19000	hp1	a0001	c0001	t0001	g0036	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19003	hp1	a0001	c0001	t0001	g0084	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19004	hp1	a0002	c0002	t0001	g0004	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19005	hp1	a0001	c0001	t0001	g0101	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19006	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19007	hp1	a0001	c0001	t0001	g0066	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19009	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19010	hp1	a0001	c0001	t0001	g0064	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19011	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19012	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19030	hp1	a0001	c0001	t0001	g0031	AFR	LWK	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19030	hp2	a0001	c0001	t0001	g0013	AFR	LWK	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19043	hp1	a0001	c0001	t0008	g0096	AFR	LWK	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19055	hp1	a0005	c0006	t0001	g0099	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19056	hp1	a0001	c0001	t0001	g0025	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19057	hp1	a0001	c0001	t0001	g0100	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19057	hp2	a0001	c0001	t0001	g0019	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19058	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19062	hp1	a0001	c0001	t0001	g0102	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19063	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19066	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19067	hp1	a0001	c0001	t0001	g0038	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19068	hp1	a0001	c0001	t0001	g0007	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19070	hp1	a0001	c0001	t0001	g0052	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19072	hp1	a0001	c0001	t0007	g0091	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19074	hp1	a0001	c0001	t0001	g0069	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19074	hp2	a0001	c0001	t0001	g0022	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19075	hp1	a0001	c0001	t0001	g0106	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19076	hp1	a0001	c0001	t0001	g0088	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19078	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19078	hp2	a0001	c0001	t0001	g0009	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19079	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19080	hp1	a0002	c0002	t0001	g0035	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19083	hp1	a0001	c0001	t0001	g0008	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19084	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19088	hp1	a0001	c0001	t0001	g0022	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19091	hp1	a0001	c0001	t0001	g0053	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19240	hp1	a0001	c0001	t0001	g0010	AFR	YRI	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA20805	hp1	a0001	c0001	t0005	g0073	EUR	TSI	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02109	hp2	a0001	c0001	t0001	g0026	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02486	hp1	a0001	c0001	t0002	g0015	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02559	hp1	a0001	c0001	t0001	g0011	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG02559	hp2	a0001	c0001	t0001	g0017	AFR	ACB	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG03471	hp1	a0001	c0001	t0001	g0105	AFR	MSL	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG06807	hp1	a0001	c0001	t0001	g0002	AFR	USA	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
HG06807	hp2	a0001	c0001	t0001	g0098	AFR	USA	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA20300	hp2	a0001	c0001	t0001	g0002	AFR	USA	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
NA21309	hp2	a0001	c0001	t0001	g0060	AFR	LWK	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0070	REF	REF	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900
homoSapiens_grch38	hp1	a0001	c0001	t0006	g0103	REF	REF	SSX7_chrX_52639061_52659900	SSX7	chrX	52639061	52659900

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:52645464	G G	T T	1	a0002 a0002	16	HG00280.hp1 HG00639.hp1 HG00741.hp1 others(13): Show HG00280.hp1 HG00639.hp1 HG00741.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01516.hp1 HG02074.hp1 HG03704.hp2 HG04228.hp1 NA18945.hp1 NA18974.hp1 NA18975.hp2 NA18980.hp2 NA19004.hp1 NA19080.hp1	missense_variant	MODERATE	c.546C>A c.546C>A	p.Asp182Glu p.Asp182Glu	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/8	705/1340	546/567	182/188	chrX	52645464
chrX:52645466	C C	T T	1	a0003 a0003	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	missense_variant	MODERATE	c.544G>A c.544G>A	p.Asp182Asn p.Asp182Asn	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/8	703/1340	544/567	182/188	chrX	52645466
chrX:52645511	T T	C C	1	a0006 a0006	1	HG02896.hp1 HG02896.hp1	missense_variant	MODERATE	c.499A>G c.499A>G	p.Arg167Gly p.Arg167Gly	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/8	658/1340	499/567	167/188	chrX	52645511
chrX:52645516	G G	A A	1	a0004 a0004	2	HG02735.hp1 HG04184.hp2 HG02735.hp1 HG04184.hp2	missense_variant	MODERATE	c.494C>T c.494C>T	p.Thr165Ile p.Thr165Ile	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/8	653/1340	494/567	165/188	chrX	52645516
chrX:52650379	A A	G G	1	a0003 a0003	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	missense_variant	MODERATE	c.304T>C c.304T>C	p.Cys102Arg p.Cys102Arg	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/8	463/1340	304/567	102/188	chrX	52650379
chrX:52652328	TG TG	T T	1	a0005 a0005	1	NA19055.hp1 NA19055.hp1	frameshift_variant	HIGH	c.203delC c.203delC	p.Pro68fs p.Pro68fs	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/8	362/1340	203/567	68/188	chrX	52652328
chrX:52652332	AG AG	A A	1	a0007 a0007	1	NA18956.hp2 NA18956.hp2	frameshift_variant	HIGH	c.199delC c.199delC	p.Leu67fs p.Leu67fs	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/8	358/1340	199/567	67/188	chrX	52652332
chrX:52652873	G G	C C	1	a0008 a0008	1	HG00741.hp2 HG00741.hp2	missense_variant	MODERATE	c.181C>G c.181C>G	p.Leu61Val p.Leu61Val	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/8	340/1340	181/567	61/188	chrX	52652873
chrX:52652917	A A	G G	1	a0009 a0009	1	HG03927.hp1 HG03927.hp1	missense_variant	MODERATE	c.137T>C c.137T>C	p.Ile46Thr p.Ile46Thr	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/8	296/1340	137/567	46/188	chrX	52652917
chrX:52652926	A A	G G	1	a0003 a0003	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	missense_variant	MODERATE	c.128T>C c.128T>C	p.Leu43Ser p.Leu43Ser	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/8	287/1340	128/567	43/188	chrX	52652926

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:52644132	C C	G G	1	a0001c0001t0005 a0001c0001t0005	1	NA20805.hp1 NA20805.hp1	3_prime_UTR_variant	MODIFIER	c.543G>C c.543G>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	1311	chrX	52644132
chrX:52644220	C C	CTG CTG	14	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(11): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0002c0002t0001 a0002c0002t0010 a0003c0003t0001 a0004c0004t0001 a0005c0006t0001 a0006c0007t0001 a0007c0008t0001 a0008c0009t0001 a0009c0005t0001	299	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(296): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18985.hp1 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.453_454dupCA c.453_454dupCA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	1222	chrX	52644220
chrX:52644220	C C	CTGTG CTGTG	1	a0001c0001t0002 a0001c0001t0002	2	HG01884.hp1 HG02486.hp1 HG01884.hp1 HG02486.hp1	3_prime_UTR_variant	MODIFIER	c.451_454dupCACA c.451_454dupCACA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	1222	chrX	52644220
chrX:52644300	C C	CAGA CAGA	1	a0001c0001t0007 a0001c0001t0007	1	NA19072.hp1 NA19072.hp1	3_prime_UTR_variant	MODIFIER	c.372_374dupTCT c.372_374dupTCT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	1142	chrX	52644300
chrX:52644422	T T	A A	2	a0001c0001t0003 a0001c0001t0008 a0001c0001t0003 a0001c0001t0008	3	HG03579.hp1 NA18522.hp1 NA19043.hp1 HG03579.hp1 NA18522.hp1 NA19043.hp1	3_prime_UTR_variant	MODIFIER	c.253A>T c.253A>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	1021	chrX	52644422
chrX:52644511	CTT CTT	C C	1	a0001c0001t0008 a0001c0001t0008	1	NA19043.hp1 NA19043.hp1	3_prime_UTR_variant	MODIFIER	c.162_163delAA c.162_163delAA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	930	chrX	52644511
chrX:52644553	T T	C C	1	a0001c0001t0009 a0001c0001t0009	1	HG00558.hp2 HG00558.hp2	3_prime_UTR_variant	MODIFIER	c.122A>G c.122A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	890	chrX	52644553
chrX:52644609	C C	T T	1	a0002c0002t0010 a0002c0002t0010	1	HG00280.hp1 HG00280.hp1	3_prime_UTR_variant	MODIFIER	c.66G>A c.66G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	834	chrX	52644609
chrX:52644636	G G	A A	1	a0002c0002t0010 a0002c0002t0010	1	HG00280.hp1 HG00280.hp1	3_prime_UTR_variant	MODIFIER	c.39C>T c.39C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	807	chrX	52644636
chrX:52644654	A A	G G	1	a0002c0002t0010 a0002c0002t0010	1	HG00280.hp1 HG00280.hp1	3_prime_UTR_variant	MODIFIER	c.21T>C c.21T>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	789	chrX	52644654
chrX:52644657	T T	A A	1	a0002c0002t0010 a0002c0002t0010	1	HG00280.hp1 HG00280.hp1	3_prime_UTR_variant	MODIFIER	c.18A>T c.18A>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	8/8	786	chrX	52644657
chrX:52654867	C C	G G	1	a0001c0001t0004 a0001c0001t0004	1	HG02523.hp2 HG02523.hp2	5_prime_UTR_variant	MODIFIER	c.-126G>C c.-126G>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/8	1395	chrX	52654867

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:52644702	G G	T T	5	a0001c0001t0001g0022 a0001c0001t0001g0064 a0001c0001t0001g0100 others(2): Show a0001c0001t0001g0022 a0001c0001t0001g0064 a0001c0001t0001g0100 a0001c0001t0001g0104 a0002c0002t0010g0061	6	HG00280.hp1 NA18990.hp1 NA19010.hp1 others(3): Show HG00280.hp1 NA18990.hp1 NA19010.hp1 NA19057.hp1 NA19074.hp2 NA19088.hp1	intron_variant	MODIFIER	c.5-32C>A c.5-32C>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644702
chrX:52644717	C C	T T	1	a0002c0002t0010g0061 a0002c0002t0010g0061	1	HG00280.hp1 HG00280.hp1	intron_variant	MODIFIER	c.5-47G>A c.5-47G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644717
chrX:52644718	A A	G G	1	a0002c0002t0010g0061 a0002c0002t0010g0061	1	HG00280.hp1 HG00280.hp1	intron_variant	MODIFIER	c.5-48T>C c.5-48T>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644718
chrX:52644720	G G	C C	1	a0002c0002t0010g0061 a0002c0002t0010g0061	1	HG00280.hp1 HG00280.hp1	intron_variant	MODIFIER	c.5-50C>G c.5-50C>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644720
chrX:52644724	C C	T T	1	a0002c0002t0010g0061 a0002c0002t0010g0061	1	HG00280.hp1 HG00280.hp1	intron_variant	MODIFIER	c.5-54G>A c.5-54G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644724
chrX:52644732	T T	C C	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	HG01099.hp1 HG01099.hp1	intron_variant	MODIFIER	c.5-62A>G c.5-62A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644732
chrX:52644798	G G	A A	1	a0001c0001t0001g0102 a0001c0001t0001g0102	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.5-128C>T c.5-128C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644798
chrX:52644857	G G	A A	1	a0001c0001t0001g0105 a0001c0001t0001g0105	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.5-187C>T c.5-187C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644857
chrX:52644907	T T	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.5-237A>G c.5-237A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52644907
chrX:52645088	T T	C C	3	a0001c0001t0001g0009 a0001c0001t0001g0042 a0001c0001t0001g0065 a0001c0001t0001g0009 a0001c0001t0001g0042 a0001c0001t0001g0065	6	HG00323.hp1 NA18948.hp1 NA18956.hp1 others(3): Show HG00323.hp1 NA18948.hp1 NA18956.hp1 NA18980.hp1 NA18987.hp1 NA19078.hp2	intron_variant	MODIFIER	c.4+351A>G c.4+351A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645088
chrX:52645144	A A	G G	3	a0001c0001t0001g0021 a0001c0001t0001g0063 a0001c0001t0001g0098 a0001c0001t0001g0021 a0001c0001t0001g0063 a0001c0001t0001g0098	4	HG02257.hp1 HG02451.hp2 HG02809.hp2 others(1): Show HG02257.hp1 HG02451.hp2 HG02809.hp2 HG06807.hp2	intron_variant	MODIFIER	c.4+295T>C c.4+295T>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645144
chrX:52645151	G G	T T	4	a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0105 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0105 a0001c0001t0002g0015	6	HG01884.hp1 HG02486.hp1 HG02622.hp1 others(3): Show HG01884.hp1 HG02486.hp1 HG02622.hp1 HG03041.hp1 HG03471.hp1 NA19030.hp1	intron_variant	MODIFIER	c.4+288C>A c.4+288C>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645151
chrX:52645268	C C	CA CA	16	a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0032 others(13): Show a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0032 a0001c0001t0001g0043 a0001c0001t0001g0053 a0001c0001t0001g0057 a0001c0001t0001g0065 a0001c0001t0001g0068 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0088 a0001c0001t0001g0095 a0002c0002t0001g0040 a0004c0004t0001g0041	29	HG00438.hp1 HG00544.hp2 HG00621.hp1 others(26): Show HG00438.hp1 HG00544.hp2 HG00621.hp1 HG01175.hp1 HG01257.hp1 HG01257.hp2 HG01346.hp1 HG01361.hp2 HG01515.hp1 HG01517.hp1 HG01517.hp2 HG02132.hp1 HG02135.hp1 HG02165.hp1 HG02572.hp1 HG03453.hp1 HG04184.hp2 NA18940.hp1 NA18943.hp1 NA18949.hp1 NA18953.hp1 NA18956.hp1 NA18967.hp1 NA18974.hp1 NA18985.hp1 NA19030.hp2 NA19063.hp1 NA19076.hp1 NA19091.hp1	intron_variant	MODIFIER	c.4+170dupT c.4+170dupT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645268
chrX:52645268	CA CA	C C	4	a0001c0001t0001g0059 a0001c0001t0001g0071 a0001c0001t0001g0090 others(1): Show a0001c0001t0001g0059 a0001c0001t0001g0071 a0001c0001t0001g0090 a0005c0006t0001g0099	4	NA18950.hp2 NA18986.hp1 NA18988.hp1 others(1): Show NA18950.hp2 NA18986.hp1 NA18988.hp1 NA19055.hp1	intron_variant	MODIFIER	c.4+170delT c.4+170delT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645268
chrX:52645268	CAA CAA	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.4+169_4+170delTT c.4+169_4+170delTT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645268
chrX:52645279	A A	C C	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.4+160T>G c.4+160T>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645279
chrX:52645374	T T	A A	2	a0001c0001t0001g0038 a0001c0001t0001g0058 a0001c0001t0001g0038 a0001c0001t0001g0058	2	NA18999.hp2 NA19067.hp1 NA18999.hp2 NA19067.hp1	intron_variant	MODIFIER	c.4+65A>T c.4+65A>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645374
chrX:52645425	G G	A A	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	NA19007.hp1 NA19007.hp1	intron_variant	MODIFIER	c.4+14C>T c.4+14C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	7/7	chrX	52645425
chrX:52645774	TC TC	T T	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.467-232delG c.467-232delG	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52645774
chrX:52645867	T T	C C	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	HG03490.hp1 HG03490.hp1	intron_variant	MODIFIER	c.467-324A>G c.467-324A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52645867
chrX:52646015	G G	GT GT	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.467-473dupA c.467-473dupA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646015
chrX:52646042	AT AT	A A	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.467-500delA c.467-500delA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646042
chrX:52646058	TTTTTA TTTTTA	T T	1	a0001c0001t0001g0056 a0001c0001t0001g0056	1	HG01884.hp2 HG01884.hp2	intron_variant	MODIFIER	c.467-520_467-516del others(5): Show c.467-520_467-516delTAAAA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646058
chrX:52646188	C C	T T	1	a0003c0003t0001g0014 a0003c0003t0001g0014	3	HG00642.hp1 HG01081.hp2 HG01175.hp2 HG00642.hp1 HG01081.hp2 HG01175.hp2	intron_variant	MODIFIER	c.467-645G>A c.467-645G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646188
chrX:52646359	G G	A A	1	a0001c0001t0001g0069 a0001c0001t0001g0069	1	NA19074.hp1 NA19074.hp1	intron_variant	MODIFIER	c.467-816C>T c.467-816C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646359
chrX:52646477	T T	C C	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	NA18949.hp2 NA18949.hp2	intron_variant	MODIFIER	c.467-934A>G c.467-934A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646477
chrX:52646529	GT GT	G G	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.467-987delA c.467-987delA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646529
chrX:52646537	A A	T T	2	a0001c0001t0001g0005 a0006c0007t0001g0055 a0001c0001t0001g0005 a0006c0007t0001g0055	10	HG01934.hp1 HG02280.hp2 HG02717.hp1 others(7): Show HG01934.hp1 HG02280.hp2 HG02717.hp1 HG02818.hp2 HG02896.hp1 HG02976.hp1 HG03209.hp1 HG03486.hp1 HG03540.hp2 NA18906.hp1	intron_variant	MODIFIER	c.467-994T>A c.467-994T>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646537
chrX:52646681	C C	A A	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.467-1138G>T c.467-1138G>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646681
chrX:52646804	G G	A A	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.467-1261C>T c.467-1261C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646804
chrX:52646896	G G	C C	3	a0001c0001t0001g0019 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0019 a0001c0001t0001g0068 a0001c0001t0001g0071	4	HG00609.hp1 HG00621.hp1 NA18950.hp2 others(1): Show HG00609.hp1 HG00621.hp1 NA18950.hp2 NA19057.hp2	intron_variant	MODIFIER	c.467-1353C>G c.467-1353C>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52646896
chrX:52647024	C C	CA CA	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	NA18987.hp1 NA18987.hp1	intron_variant	MODIFIER	c.466+1236dupT c.466+1236dupT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647024
chrX:52647040	C C	T T	1	a0001c0001t0001g0077 a0001c0001t0001g0077	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.466+1221G>A c.466+1221G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647040
chrX:52647129	A A	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.466+1132T>G c.466+1132T>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647129
chrX:52647138	T T	C C	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	HG02071.hp1 HG02071.hp1	intron_variant	MODIFIER	c.466+1123A>G c.466+1123A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647138
chrX:52647276	G G	A A	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.466+985C>T c.466+985C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647276
chrX:52647424	T T	A A	1	a0007c0008t0001g0048 a0007c0008t0001g0048	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.466+837A>T c.466+837A>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647424
chrX:52647451	G G	A A	1	a0001c0001t0001g0069 a0001c0001t0001g0069	1	NA19074.hp1 NA19074.hp1	intron_variant	MODIFIER	c.466+810C>T c.466+810C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647451
chrX:52647531	T T	C C	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.466+730A>G c.466+730A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647531
chrX:52647570	C C	T T	1	a0001c0001t0001g0060 a0001c0001t0001g0060	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.466+691G>A c.466+691G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647570
chrX:52647624	C C	A A	1	a0001c0001t0001g0085 a0001c0001t0001g0085	1	HG02970.hp1 HG02970.hp1	intron_variant	MODIFIER	c.466+637G>T c.466+637G>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647624
chrX:52647727	T T	C C	107	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(104): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0002g0015 a0001c0001t0003g0023 a0001c0001t0004g0024 a0001c0001t0005g0073 a0001c0001t0007g0091 a0001c0001t0008g0096 a0001c0001t0009g0092 a0002c0002t0001g0004 a0002c0002t0001g0035 a0002c0002t0001g0040 a0002c0002t0001g0044 a0002c0002t0001g0089 a0002c0002t0010g0061 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0004c0004t0001g0041 a0004c0004t0001g0093 a0005c0006t0001g0099 a0006c0007t0001g0055 a0007c0008t0001g0048 a0008c0009t0001g0080 a0009c0005t0001g0049	304	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(301): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18985.hp1 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.466+534A>G c.466+534A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647727
chrX:52647791	C C	CA CA	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	NA18979.hp1 NA18979.hp1	intron_variant	MODIFIER	c.466+469dupT c.466+469dupT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647791
chrX:52647867	T T	C C	3	a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0002g0015 a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0002g0015	5	HG01884.hp1 HG02486.hp1 HG02622.hp1 others(2): Show HG01884.hp1 HG02486.hp1 HG02622.hp1 HG03041.hp1 NA19030.hp1	intron_variant	MODIFIER	c.466+394A>G c.466+394A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52647867
chrX:52648055	A A	T T	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.466+206T>A c.466+206T>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52648055
chrX:52648076	T T	C C	1	a0001c0001t0001g0018 a0001c0001t0001g0018	2	HG01070.hp1 HG01074.hp1 HG01070.hp1 HG01074.hp1	intron_variant	MODIFIER	c.466+185A>G c.466+185A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	6/7	chrX	52648076
chrX:52648472	C C	T T	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG02886.hp1 HG02886.hp1	intron_variant	MODIFIER	c.331-76G>A c.331-76G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52648472
chrX:52648620	A A	G G	1	a0001c0001t0004g0024 a0001c0001t0004g0024	1	HG02523.hp2 HG02523.hp2	intron_variant	MODIFIER	c.331-224T>C c.331-224T>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52648620
chrX:52648634	G G	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.331-238C>G c.331-238C>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52648634
chrX:52648696	G G	A A	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG02886.hp1 HG02886.hp1	intron_variant	MODIFIER	c.331-300C>T c.331-300C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52648696
chrX:52648703	TA TA	T T	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.331-308delT c.331-308delT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52648703
chrX:52648936	G G	A A	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18949.hp1 NA18949.hp1	intron_variant	MODIFIER	c.331-540C>T c.331-540C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52648936
chrX:52649028	C C	CT CT	2	a0001c0001t0001g0039 a0001c0001t0001g0072 a0001c0001t0001g0039 a0001c0001t0001g0072	2	HG01433.hp1 NA18979.hp1 HG01433.hp1 NA18979.hp1	intron_variant	MODIFIER	c.331-633dupA c.331-633dupA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649028
chrX:52649036	T T	G G	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG02809.hp1 HG02809.hp1	intron_variant	MODIFIER	c.331-640A>C c.331-640A>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649036
chrX:52649219	T T	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.331-823A>G c.331-823A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649219
chrX:52649310	C C	T T	2	a0001c0001t0001g0012 a0001c0001t0001g0059 a0001c0001t0001g0012 a0001c0001t0001g0059	4	NA18965.hp1 NA18968.hp2 NA18979.hp2 others(1): Show NA18965.hp1 NA18968.hp2 NA18979.hp2 NA18988.hp1	intron_variant	MODIFIER	c.331-914G>A c.331-914G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649310
chrX:52649428	T T	A A	2	a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0028 a0001c0001t0001g0029	2	HG02258.hp1 HG02809.hp1 HG02258.hp1 HG02809.hp1	intron_variant	MODIFIER	c.330+925A>T c.330+925A>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649428
chrX:52649573	C C	A A	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	NA18950.hp2 NA18950.hp2	intron_variant	MODIFIER	c.330+780G>T c.330+780G>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649573
chrX:52649600	G G	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.330+753C>G c.330+753C>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649600
chrX:52649605	T T	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.330+748A>G c.330+748A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649605
chrX:52649613	C C	T T	9	a0001c0001t0001g0007 a0001c0001t0001g0020 a0001c0001t0001g0037 others(6): Show a0001c0001t0001g0007 a0001c0001t0001g0020 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0052 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0088 a0007c0008t0001g0048	16	HG01069.hp1 HG01071.hp1 HG01256.hp1 others(13): Show HG01069.hp1 HG01071.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01928.hp1 HG02004.hp1 HG02148.hp1 NA18942.hp1 NA18956.hp2 NA18999.hp1 NA18999.hp2 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19076.hp1	intron_variant	MODIFIER	c.330+740G>A c.330+740G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649613
chrX:52649773	T T	C C	1	a0001c0001t0001g0095 a0001c0001t0001g0095	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.330+580A>G c.330+580A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52649773
chrX:52650012	C C	A A	1	a0001c0001t0001g0072 a0001c0001t0001g0072	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.330+341G>T c.330+341G>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52650012
chrX:52650065	T T	C C	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.330+288A>G c.330+288A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52650065
chrX:52650100	C C	T T	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.330+253G>A c.330+253G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52650100
chrX:52650115	AT AT	A A	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.330+237delA c.330+237delA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	5/7	chrX	52650115
chrX:52650665	AT AT	A A	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.281-264delA c.281-264delA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52650665
chrX:52650674	C C	A A	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.281-272G>T c.281-272G>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52650674
chrX:52650969	T T	C C	1	a0001c0001t0005g0073 a0001c0001t0005g0073	1	NA20805.hp1 NA20805.hp1	intron_variant	MODIFIER	c.281-567A>G c.281-567A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52650969
chrX:52650976	C C	T T	1	a0001c0001t0001g0082 a0001c0001t0001g0082	1	HG02135.hp1 HG02135.hp1	intron_variant	MODIFIER	c.281-574G>A c.281-574G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52650976
chrX:52650999	C C	A A	4	a0001c0001t0001g0043 a0001c0001t0001g0074 a0001c0001t0001g0075 others(1): Show a0001c0001t0001g0043 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076	4	HG00597.hp1 HG02071.hp1 NA18949.hp1 others(1): Show HG00597.hp1 HG02071.hp1 NA18949.hp1 NA18985.hp1	intron_variant	MODIFIER	c.281-597G>T c.281-597G>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52650999
chrX:52651054	A A	G G	1	a0001c0001t0001g0097 a0001c0001t0001g0097	1	HG02683.hp1 HG02683.hp1	intron_variant	MODIFIER	c.281-652T>C c.281-652T>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52651054
chrX:52651169	C C	T T	1	a0001c0001t0001g0087 a0001c0001t0001g0087	1	HG00544.hp1 HG00544.hp1	intron_variant	MODIFIER	c.281-767G>A c.281-767G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52651169
chrX:52651551	G G	A A	10	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0011 others(7): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0033 a0001c0001t0001g0056 a0001c0001t0001g0077 a0001c0001t0003g0023 a0001c0001t0008g0096 a0006c0007t0001g0055	29	HG00738.hp1 HG01081.hp1 HG01243.hp1 others(26): Show HG00738.hp1 HG01081.hp1 HG01243.hp1 HG01884.hp2 HG01934.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02630.hp1 HG02717.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp1 NA18522.hp1 NA18906.hp1 NA19043.hp1	intron_variant	MODIFIER	c.280+701C>T c.280+701C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52651551
chrX:52651752	G G	A A	5	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0017 others(2): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0017 a0001c0001t0001g0056 a0006c0007t0001g0055	21	HG01081.hp1 HG01243.hp1 HG01884.hp2 others(18): Show HG01081.hp1 HG01243.hp1 HG01884.hp2 HG01934.hp1 HG02280.hp2 HG02559.hp2 HG02615.hp1 HG02717.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp2 NA18906.hp1	intron_variant	MODIFIER	c.280+500C>T c.280+500C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52651752
chrX:52651752	G G	T T	1	a0001c0001t0001g0081 a0001c0001t0001g0081	1	HG02572.hp1 HG02572.hp1	intron_variant	MODIFIER	c.280+500C>A c.280+500C>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52651752
chrX:52651768	C C	G G	7	a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0105 others(4): Show a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0105 a0001c0001t0002g0015 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	11	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(8): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG01884.hp1 HG02486.hp1 HG02622.hp1 HG03041.hp1 HG03471.hp1 HG03704.hp1 NA19030.hp1	intron_variant	MODIFIER	c.280+484G>C c.280+484G>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52651768
chrX:52651867	C C	T T	5	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0017 others(2): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0017 a0001c0001t0001g0056 a0006c0007t0001g0055	21	HG01081.hp1 HG01243.hp1 HG01884.hp2 others(18): Show HG01081.hp1 HG01243.hp1 HG01884.hp2 HG01934.hp1 HG02280.hp2 HG02559.hp2 HG02615.hp1 HG02717.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp2 NA18906.hp1	intron_variant	MODIFIER	c.280+385G>A c.280+385G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52651867
chrX:52651933	A A	C C	2	a0001c0001t0001g0011 a0001c0001t0001g0033 a0001c0001t0001g0011 a0001c0001t0001g0033	4	HG02559.hp1 HG02630.hp1 HG02976.hp2 others(1): Show HG02559.hp1 HG02630.hp1 HG02976.hp2 HG03098.hp1	intron_variant	MODIFIER	c.280+319T>G c.280+319T>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52651933
chrX:52652070	T T	G G	4	a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0105 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0105 a0001c0001t0002g0015	6	HG01884.hp1 HG02486.hp1 HG02622.hp1 others(3): Show HG01884.hp1 HG02486.hp1 HG02622.hp1 HG03041.hp1 HG03471.hp1 NA19030.hp1	intron_variant	MODIFIER	c.280+182A>C c.280+182A>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52652070
chrX:52652072	G G	A A	4	a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0105 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0105 a0001c0001t0002g0015	6	HG01884.hp1 HG02486.hp1 HG02622.hp1 others(3): Show HG01884.hp1 HG02486.hp1 HG02622.hp1 HG03041.hp1 HG03471.hp1 NA19030.hp1	intron_variant	MODIFIER	c.280+180C>T c.280+180C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52652072
chrX:52652123	A A	AT AT	2	a0001c0001t0001g0054 a0001c0001t0001g0086 a0001c0001t0001g0054 a0001c0001t0001g0086	2	HG02738.hp1 HG03669.hp1 HG02738.hp1 HG03669.hp1	intron_variant	MODIFIER	c.280+128dupA c.280+128dupA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52652123
chrX:52652123	A A	T T	1	a0001c0001t0001g0085 a0001c0001t0001g0085	1	HG02970.hp1 HG02970.hp1	intron_variant	MODIFIER	c.280+129T>A c.280+129T>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52652123
chrX:52652123	AT AT	A A	10	a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0031 others(7): Show a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0001g0047 a0001c0001t0001g0078 a0001c0001t0001g0105 a0001c0001t0002g0015 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	17	HG00642.hp1 HG01081.hp2 HG01109.hp1 others(14): Show HG00642.hp1 HG01081.hp2 HG01109.hp1 HG01168.hp2 HG01175.hp2 HG01257.hp1 HG01261.hp1 HG01884.hp1 HG02015.hp1 HG02486.hp1 HG02622.hp1 HG02886.hp1 HG03041.hp1 HG03471.hp1 HG03704.hp1 NA19030.hp1 NA19240.hp1	intron_variant	MODIFIER	c.280+128delA c.280+128delA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	4/7	chrX	52652123
chrX:52652374	T T	C C	1	a0001c0001t0001g0097 a0001c0001t0001g0097	1	HG02683.hp1 HG02683.hp1	intron_variant	MODIFIER	c.185-27A>G c.185-27A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/7	chrX	52652374
chrX:52652396	T T	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.185-49A>G c.185-49A>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/7	chrX	52652396
chrX:52652484	C C	T T	2	a0001c0001t0001g0036 a0001c0001t0001g0053 a0001c0001t0001g0036 a0001c0001t0001g0053	2	NA19000.hp1 NA19091.hp1 NA19000.hp1 NA19091.hp1	intron_variant	MODIFIER	c.185-137G>A c.185-137G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/7	chrX	52652484
chrX:52652656	C C	T T	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	NA19070.hp1 NA19070.hp1	intron_variant	MODIFIER	c.184+214G>A c.184+214G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/7	chrX	52652656
chrX:52652672	A A	T T	4	a0001c0001t0001g0018 a0001c0001t0001g0050 a0001c0001t0001g0051 others(1): Show a0001c0001t0001g0018 a0001c0001t0001g0050 a0001c0001t0001g0051 a0008c0009t0001g0080	5	HG00741.hp2 HG01070.hp1 HG01074.hp1 others(2): Show HG00741.hp2 HG01070.hp1 HG01074.hp1 HG01099.hp1 HG02683.hp2	intron_variant	MODIFIER	c.184+198T>A c.184+198T>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/7	chrX	52652672
chrX:52652750	G G	A A	1	a0001c0001t0001g0079 a0001c0001t0001g0079	1	HG02723.hp2 HG02723.hp2	intron_variant	MODIFIER	c.184+120C>T c.184+120C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	3/7	chrX	52652750
chrX:52652996	TA TA	T T	1	a0007c0008t0001g0048 a0007c0008t0001g0048	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.70-13delT c.70-13delT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	2/7	chrX	52652996
chrX:52653044	G G	T T	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.70-60C>A c.70-60C>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	2/7	chrX	52653044
chrX:52653581	A A	T T	1	a0001c0001t0001g0084 a0001c0001t0001g0084	1	NA19003.hp1 NA19003.hp1	intron_variant	MODIFIER	c.-20-89T>A c.-20-89T>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52653581
chrX:52653645	C C	T T	1	a0001c0001t0001g0083 a0001c0001t0001g0083	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.-20-153G>A c.-20-153G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52653645
chrX:52653853	G G	T T	1	a0001c0001t0004g0024 a0001c0001t0004g0024	1	HG02523.hp2 HG02523.hp2	intron_variant	MODIFIER	c.-20-361C>A c.-20-361C>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52653853
chrX:52653864	C C	T T	2	a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0046 a0001c0001t0001g0047	2	HG02630.hp2 HG02886.hp1 HG02630.hp2 HG02886.hp1	intron_variant	MODIFIER	c.-20-372G>A c.-20-372G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52653864
chrX:52654086	G G	C C	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.-20-594C>G c.-20-594C>G	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654086
chrX:52654097	G G	A A	1	a0001c0001t0001g0098 a0001c0001t0001g0098	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.-20-605C>T c.-20-605C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654097
chrX:52654149	C C	T T	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.-21+613G>A c.-21+613G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654149
chrX:52654193	T T	G G	3	a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0002g0015 a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0002g0015	5	HG01884.hp1 HG02486.hp1 HG02622.hp1 others(2): Show HG01884.hp1 HG02486.hp1 HG02622.hp1 HG03041.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-21+569A>C c.-21+569A>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654193
chrX:52654222	C C	T T	1	a0001c0001t0001g0082 a0001c0001t0001g0082	1	HG02135.hp1 HG02135.hp1	intron_variant	MODIFIER	c.-21+540G>A c.-21+540G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654222
chrX:52654257	A A	AAC AAC	3	a0001c0001t0001g0032 a0001c0001t0001g0045 a0001c0001t0001g0081 a0001c0001t0001g0032 a0001c0001t0001g0045 a0001c0001t0001g0081	3	HG02572.hp1 HG03453.hp1 HG03654.hp1 HG02572.hp1 HG03453.hp1 HG03654.hp1	intron_variant	MODIFIER	c.-21+503_-21+504dup others(2): Show c.-21+503_-21+504dupGT	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654257
chrX:52654290	G G	A A	3	a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0002g0015 a0001c0001t0001g0016 a0001c0001t0001g0031 a0001c0001t0002g0015	5	HG01884.hp1 HG02486.hp1 HG02622.hp1 others(2): Show HG01884.hp1 HG02486.hp1 HG02622.hp1 HG03041.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-21+472C>T c.-21+472C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654290
chrX:52654298	G G	A A	1	a0003c0003t0001g0014 a0003c0003t0001g0014	3	HG00642.hp1 HG01081.hp2 HG01175.hp2 HG00642.hp1 HG01081.hp2 HG01175.hp2	intron_variant	MODIFIER	c.-21+464C>T c.-21+464C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654298
chrX:52654361	TG TG	T T	1	a0002c0002t0001g0044 a0002c0002t0001g0044	1	NA18945.hp1 NA18945.hp1	intron_variant	MODIFIER	c.-21+400delC c.-21+400delC	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654361
chrX:52654362	G G	T T	1	a0002c0002t0001g0035 a0002c0002t0001g0035	1	NA19080.hp1 NA19080.hp1	intron_variant	MODIFIER	c.-21+400C>A c.-21+400C>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654362
chrX:52654363	A A	T T	2	a0002c0002t0001g0035 a0002c0002t0001g0044 a0002c0002t0001g0035 a0002c0002t0001g0044	2	NA18945.hp1 NA19080.hp1 NA18945.hp1 NA19080.hp1	intron_variant	MODIFIER	c.-21+399T>A c.-21+399T>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654363
chrX:52654364	G G	GT GT	5	a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 others(2): Show a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0105 a0005c0006t0001g0099	5	HG03471.hp1 NA19005.hp1 NA19055.hp1 others(2): Show HG03471.hp1 NA19005.hp1 NA19055.hp1 NA19057.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-21+397dupA c.-21+397dupA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654364
chrX:52654364	G G	GTT GTT	31	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0013 others(28): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0026 a0001c0001t0001g0032 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0106 a0001c0001t0002g0015 a0001c0001t0003g0023 a0001c0001t0004g0024 a0001c0001t0007g0091 a0001c0001t0008g0096 a0001c0001t0009g0092 a0002c0002t0001g0089 a0004c0004t0001g0093	86	HG00099.hp1 HG00323.hp2 HG00408.hp2 others(83): Show HG00099.hp1 HG00323.hp2 HG00408.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp2 HG00735.hp2 HG01069.hp1 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01261.hp1 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01981.hp1 HG02015.hp1 HG02055.hp1 HG02083.hp1 HG02109.hp2 HG02135.hp1 HG02145.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02683.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG03017.hp1 HG03041.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp1 HG03579.hp1 HG03669.hp2 HG03710.hp1 HG03834.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp2 NA18944.hp1 NA18951.hp2 NA18952.hp1 NA18962.hp1 NA18967.hp1 NA18971.hp1 NA18980.hp2 NA18986.hp1 NA18994.hp1 NA18995.hp1 NA18999.hp1 NA19003.hp1 NA19006.hp1 NA19009.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp2 NA19043.hp1 NA19058.hp1 NA19066.hp1 NA19072.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19078.hp1 NA19079.hp1 NA19084.hp2 NA19088.hp1 NA19240.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-21+396_-21+397dup others(2): Show c.-21+396_-21+397dupAA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654364
chrX:52654364	G G	GTTT GTTT	52	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(49): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0005g0073 a0002c0002t0001g0004 a0002c0002t0010g0061 a0006c0007t0001g0055 a0007c0008t0001g0048 a0008c0009t0001g0080 a0009c0005t0001g0049	185	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(182): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02523.hp1 HG02615.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02976.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18747.hp1 NA18906.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp1 NA18948.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18960.hp1 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18985.hp1 NA18987.hp2 NA18988.hp1 NA18999.hp2 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19056.hp1 NA19057.hp2 NA19060.hp1 NA19063.hp1 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19078.hp2 NA19080.hp2 NA19082.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19091.hp1 NA19240.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-21+395_-21+397dup others(3): Show c.-21+395_-21+397dupAAA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654364
chrX:52654364	G G	GTTTT GTTTT	11	a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0017 others(8): Show a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0043 a0002c0002t0001g0040 a0004c0004t0001g0041	18	HG01256.hp1 HG01978.hp1 HG02559.hp1 others(15): Show HG01256.hp1 HG01978.hp1 HG02559.hp1 HG02559.hp2 HG02630.hp1 HG02970.hp2 HG02976.hp2 HG03927.hp2 HG04184.hp2 HG04204.hp1 NA18941.hp2 NA18949.hp1 NA18974.hp1 NA18979.hp1 NA18987.hp1 NA19000.hp1 NA19067.hp1 NA19083.hp1	intron_variant	MODIFIER	c.-21+394_-21+397dup others(4): Show c.-21+394_-21+397dupAAAA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654364
chrX:52654364	G G	GTTTTGT GTTTTGT	1	a0003c0003t0001g0108 a0003c0003t0001g0108	1	HG01168.hp2 HG01168.hp2	intron_variant	MODIFIER	c.-21+397_-21+398ins others(6): Show c.-21+397_-21+398insACAAAA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654364
chrX:52654364	G G	GTTTTGTT GTTTTGTT	2	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0014 a0003c0003t0001g0107	4	HG00642.hp1 HG01081.hp2 HG01175.hp2 others(1): Show HG00642.hp1 HG01081.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.-21+397_-21+398ins others(7): Show c.-21+397_-21+398insAACAAAA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654364
chrX:52654364	G G	GTTTTT GTTTTT	2	a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0033 a0001c0001t0001g0034	2	HG03098.hp1 NA18977.hp1 HG03098.hp1 NA18977.hp1	intron_variant	MODIFIER	c.-21+393_-21+397dup others(5): Show c.-21+393_-21+397dupAAAAA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654364
chrX:52654364	G G	T T	2	a0002c0002t0001g0035 a0002c0002t0001g0044 a0002c0002t0001g0035 a0002c0002t0001g0044	2	NA18945.hp1 NA19080.hp1 NA18945.hp1 NA19080.hp1	intron_variant	MODIFIER	c.-21+398C>A c.-21+398C>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654364
chrX:52654373	T T	TTG TTG	1	a0001c0001t0001g0104 a0001c0001t0001g0104	1	NA18990.hp1 NA18990.hp1	intron_variant	MODIFIER	c.-21+388_-21+389ins others(2): Show c.-21+388_-21+389insCA	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654373
chrX:52654409	C C	T T	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.-21+353G>A c.-21+353G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654409
chrX:52654459	C C	G G	11	a0001c0001t0001g0016 a0001c0001t0001g0028 a0001c0001t0001g0029 others(8): Show a0001c0001t0001g0016 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0105 a0001c0001t0002g0015 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	15	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(12): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG01255.hp1 HG01884.hp1 HG02258.hp1 HG02486.hp1 HG02622.hp1 HG02809.hp1 HG03041.hp1 HG03453.hp1 HG03471.hp1 HG03704.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-21+303G>C c.-21+303G>C	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654459
chrX:52654474	C C	T T	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG00099.hp2 HG00099.hp2	intron_variant	MODIFIER	c.-21+288G>A c.-21+288G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654474
chrX:52654488	C C	T T	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	HG02109.hp2 HG02109.hp2	intron_variant	MODIFIER	c.-21+274G>A c.-21+274G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654488
chrX:52654522	C C	A A	1	a0001c0001t0001g0105 a0001c0001t0001g0105	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.-21+240G>T c.-21+240G>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654522
chrX:52654676	AG AG	A A	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.-21+85delC c.-21+85delC	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654676
chrX:52654708	G G	A A	3	a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108 a0003c0003t0001g0014 a0003c0003t0001g0107 a0003c0003t0001g0108	5	HG00642.hp1 HG01081.hp2 HG01168.hp2 others(2): Show HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01175.hp2 HG03704.hp1	intron_variant	MODIFIER	c.-21+54C>T c.-21+54C>T	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654708
chrX:52654753	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	NA19056.hp1 NA19056.hp1	intron_variant	MODIFIER	c.-21+9G>A c.-21+9G>A	SSX7	ENSG00000187754.9	transcript	ENST00000298181.6	protein_coding	1/7	chrX	52654753

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🧬 JoGo Online Haplotype Explorer SSX7_chrX_52639061_52659900

JoGo Local Haplotype Explorer (on iGV) SSX7_chrX_52639061_52659900

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 9)

TTranscript Level Haplotype Info (Total: 10)

GGenebody Level Haplotype Info (Total: 108)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 9)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 18)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 108)

Haplotype Details by Sample (Haploid Level) (Total: 305)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 10)

CCoding Level Variants (Synonymous Mutations) (Total: 0)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 12)

GGenebody Level Haplotype Variants (Intron) (Total: 124)

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Annotation (Repeats)

Annotation (SNP Array)