Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	6696
ensemblid	ENSG00000118785.15
hgncid	11255
symbol	SPP1
name	secreted phosphoprotein 1
refseq_nuc	NM_001040058.2
refseq_prot	NP_001035147.1
ensembl_nuc	ENST00000395080.8
ensembl_prot	ENSP00000378517.3
mane_status	MANE Select
chr	chr4
start	87975714
end	87983411
strand	+
ver	v1.2
region	chr4:87975714-87983411
region5000	chr4:87970714-87988411
regionname0	SPP1_chr4_87975714_87983411
regionname5000	SPP1_chr4_87970714_87988411

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	314	406	71	78	195	18	42	156	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0002	0/0	314	13	12	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0003	0/0	314	8	7	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0004	0/0	314	2	0	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0005	0/0	180	1	0	0	1	0	0	1	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0006	0/0	314	1	1	0	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0007	0/0	314	1	1	0	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0008	0/0	314	1	1	0	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0009	0/0	314	1	1	0	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0010	0/0	314	1	0	0	1	0	0	1	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0011	0/0	314	1	0	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	945	200	46	51	64	11	26	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0002	0/0	945	193	14	27	131	7	14	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0003	0/0	945	13	12	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0004	0/0	945	8	7	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0005	0/0	945	8	8	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0006	0/0	945	3	1	0	0	0	2	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0007	0/0	945	2	0	2	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0008	0/0	945	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0009	0/0	945	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0010	0/0	945	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0011	0/0	945	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0012	0/0	945	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0013	0/0	945	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0014	0/0	945	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
c0015	0/0	945	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	617	220	62	52	65	11	28	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0002	0/0	617	103	3	16	75	3	6	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0003	0/0	617	90	11	11	58	2	8	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0004	0/0	617	13	12	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0005	0/0	617	3	2	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0006	0/0	617	2	0	0	0	2	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0007	0/0	617	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0008	0/0	617	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0009	0/0	617	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0010	0/0	617	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
t0011	0/0	617	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	69	3	10	48	5	3	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0002	1/0	64	1	14	41	2	5	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0003	0/0	35	0	4	28	1	2	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0004	0/0	23	1	10	1	2	9	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0005	0/0	23	20	2	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0006	0/1	21	6	8	0	3	3	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0007	0/0	18	1	3	12	0	2	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0008	0/0	13	3	4	4	1	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0009	0/0	9	0	5	4	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0010	0/0	6	0	0	6	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0011	0/0	6	0	0	5	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0012	0/0	5	4	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0013	0/0	5	5	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0014	0/0	5	3	2	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0015	0/0	4	0	0	4	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0016	0/0	4	0	1	1	0	2	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0017	0/0	4	0	0	4	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0018	0/0	3	2	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0019	0/0	3	3	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0020	0/0	3	3	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0021	0/0	3	0	0	3	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0022	0/0	3	0	2	0	1	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0023	0/0	3	3	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0024	0/0	3	0	0	2	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0025	0/0	3	0	0	3	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0026	0/0	3	3	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0027	0/0	3	1	0	0	1	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0028	0/0	2	0	0	2	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0029	0/0	2	0	1	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0030	0/0	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0031	0/0	2	0	0	2	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0032	0/0	2	0	0	0	1	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0033	0/0	2	0	0	1	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0034	0/0	2	0	0	1	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0035	0/0	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0036	0/0	2	1	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0037	0/0	2	1	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0038	0/0	2	0	1	0	1	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0039	0/0	2	0	0	0	0	2	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0040	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0041	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0042	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0043	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0044	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0045	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0046	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0047	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0048	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0049	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0050	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0051	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0052	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0053	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0054	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0055	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0056	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0057	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0058	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0059	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0060	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0061	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0062	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0063	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0064	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0065	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0066	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0067	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0068	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0069	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0070	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0071	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0072	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0073	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0074	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0075	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0076	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0077	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0078	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0079	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0080	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0081	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0082	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0083	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0084	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0085	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0086	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0087	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0088	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0089	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0090	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0091	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0092	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0093	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0094	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0095	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0096	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0097	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0098	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0099	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0100	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0101	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0102	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0103	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0104	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0105	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0106	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
g0107	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	945	200	46	51	64	11	26	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0002	0/0	945	193	14	27	131	7	14	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0005	0/0	945	8	8	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0006	0/0	945	3	1	0	0	0	2	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0008	0/0	945	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0002c0003	0/0	945	13	12	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0003c0004	0/0	945	8	7	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0004c0007	0/0	945	2	0	2	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0005c0010	0/0	945	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0006c0011	0/0	945	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0007c0014	0/0	945	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0008c0015	0/0	945	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0009c0013	0/0	945	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0010c0012	0/0	945	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0011c0009	0/0	945	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1561	195	43	49	64	11	26	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0001t0005	0/0	1561	3	2	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0001t0007	0/0	1561	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0001t0010	0/0	1561	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0002t0002	0/0	1561	102	3	16	74	3	6	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0002t0003	0/0	1561	88	10	11	57	2	8	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0002t0006	0/0	1561	2	0	0	0	2	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0002t0009	0/0	1561	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0005t0001	0/0	1561	8	8	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0006t0001	0/0	1561	3	1	0	0	0	2	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0001c0008t0001	0/0	1561	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0002c0003t0004	0/0	1561	13	12	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0003c0004t0001	0/0	1561	7	6	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0003c0004t0008	0/0	1561	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0004c0007t0001	0/0	1561	2	0	2	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0005c0010t0003	0/0	1561	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0006c0011t0003	0/0	1561	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0007c0014t0001	0/0	1561	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0008c0015t0001	0/0	1561	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0009c0013t0011	0/0	1561	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0010c0012t0001	0/0	1561	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411
a0011c0009t0002	0/0	1561	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	copy fasta	chr4	87970714	87988411

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0002	1/0	61	1	12	40	2	5	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0004	0/0	23	1	10	1	2	9	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0005	0/0	23	20	2	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0006	0/1	20	6	7	0	3	3	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0009	0/0	9	0	5	4	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0014	0/0	4	2	2	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0015	0/0	4	0	0	4	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0019	0/0	3	3	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0022	0/0	3	0	2	0	1	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0024	0/0	3	0	0	2	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0027	0/0	3	1	0	0	1	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0028	0/0	2	0	0	2	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0029	0/0	2	0	1	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0032	0/0	2	0	0	0	1	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0034	0/0	2	0	0	1	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0037	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0038	0/0	2	0	1	0	1	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0039	0/0	2	0	0	0	0	2	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0040	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0045	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0047	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0048	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0049	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0051	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0052	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0054	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0055	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0059	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0065	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0067	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0068	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0071	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0074	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0075	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0080	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0082	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0083	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0085	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0091	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0092	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0093	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0094	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0001g0106	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0005g0018	0/0	3	2	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0007g0053	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0001t0010g0006	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0001	0/0	63	0	10	47	3	3	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0003	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0007	0/0	18	1	3	12	0	2	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0021	0/0	3	0	0	3	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0025	0/0	3	0	0	3	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0033	0/0	2	0	0	1	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0041	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0050	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0058	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0060	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0061	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0063	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0064	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0069	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0072	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0073	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0076	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0002g0102	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0001	0/0	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0003	0/0	34	0	4	27	1	2	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0008	0/0	12	2	4	4	1	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0010	0/0	6	0	0	6	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0011	0/0	6	0	0	5	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0016	0/0	4	0	1	1	0	2	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0017	0/0	4	0	0	4	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0023	0/0	3	3	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0031	0/0	2	0	0	2	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0035	0/0	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0066	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0070	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0077	0/0	1	0	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0084	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0095	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0096	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0097	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0098	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0099	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0100	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0101	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0103	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0003g0105	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0006g0001	0/0	2	0	0	0	2	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0002t0009g0008	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0005t0001g0026	0/0	3	3	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0005t0001g0030	0/0	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0005t0001g0046	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0005t0001g0081	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0005t0001g0086	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0006t0001g0042	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0006t0001g0043	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0006t0001g0062	0/0	1	0	0	0	0	1	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0008t0001g0087	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0001c0008t0001g0107	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0002c0003t0004g0012	0/0	5	4	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0002c0003t0004g0013	0/0	5	5	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0002c0003t0004g0088	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0002c0003t0004g0089	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0002c0003t0004g0090	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0003c0004t0001g0020	0/0	2	2	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0003c0004t0001g0036	0/0	2	1	1	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0003c0004t0001g0057	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0003c0004t0001g0078	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0003c0004t0001g0079	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0003c0004t0008g0020	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0004c0007t0001g0002	0/0	2	0	2	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0005c0010t0003g0104	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0006c0011t0003g0001	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0007c0014t0001g0014	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0008c0015t0001g0037	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0009c0013t0011g0056	0/0	1	1	0	0	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0010c0012t0001g0002	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
a0011c0009t0002g0001	0/0	1	0	0	1	0	0	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0002	t0003	g0008	EUR	GBR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00099	hp2	a0001	c0002	t0002	g0001	EUR	GBR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00140	hp1	a0001	c0001	t0001	g0022	EUR	GBR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00140	hp2	a0001	c0001	t0001	g0006	EUR	GBR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00280	hp1	a0001	c0001	t0001	g0004	EUR	FIN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00280	hp2	a0001	c0001	t0001	g0004	EUR	FIN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00323	hp1	a0001	c0001	t0001	g0038	EUR	FIN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00408	hp1	a0001	c0002	t0002	g0001	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00408	hp2	a0001	c0002	t0002	g0001	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00423	hp1	a0001	c0001	t0001	g0028	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00423	hp2	a0001	c0002	t0002	g0007	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00438	hp1	a0001	c0001	t0001	g0024	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00438	hp2	a0001	c0002	t0002	g0102	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00558	hp1	a0001	c0002	t0002	g0001	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00558	hp2	a0001	c0002	t0002	g0025	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00609	hp1	a0001	c0002	t0003	g0010	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00609	hp2	a0001	c0001	t0001	g0002	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00621	hp1	a0001	c0002	t0003	g0003	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00621	hp2	a0001	c0002	t0003	g0031	EAS	CHS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00639	hp1	a0001	c0001	t0005	g0018	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00639	hp2	a0001	c0001	t0001	g0002	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00642	hp1	a0001	c0001	t0001	g0106	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00642	hp2	a0001	c0002	t0002	g0001	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00733	hp1	a0001	c0002	t0003	g0008	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00733	hp2	a0001	c0001	t0001	g0005	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00735	hp1	a0001	c0001	t0001	g0009	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00735	hp2	a0001	c0001	t0001	g0014	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00738	hp1	a0001	c0001	t0001	g0006	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00738	hp2	a0001	c0001	t0001	g0006	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00741	hp1	a0001	c0002	t0003	g0008	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG00741	hp2	a0001	c0001	t0001	g0004	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01069	hp1	a0003	c0004	t0001	g0036	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01069	hp2	a0001	c0001	t0001	g0004	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01070	hp1	a0004	c0007	t0001	g0002	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01070	hp2	a0001	c0002	t0002	g0001	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01071	hp1	a0004	c0007	t0001	g0002	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01071	hp2	a0001	c0001	t0001	g0004	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01074	hp1	a0001	c0001	t0001	g0009	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01074	hp2	a0001	c0001	t0001	g0004	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01081	hp1	a0001	c0001	t0001	g0004	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01081	hp2	a0001	c0001	t0001	g0002	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01099	hp1	a0001	c0002	t0002	g0041	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01099	hp2	a0001	c0001	t0001	g0006	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01109	hp1	a0001	c0001	t0001	g0082	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01109	hp2	a0001	c0001	t0001	g0002	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01167	hp1	a0001	c0001	t0001	g0091	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01167	hp2	a0001	c0001	t0001	g0006	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01168	hp1	a0001	c0001	t0001	g0004	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01168	hp2	a0001	c0001	t0010	g0006	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01169	hp1	a0001	c0001	t0001	g0004	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01169	hp2	a0001	c0001	t0001	g0005	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01175	hp1	a0001	c0001	t0001	g0006	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01175	hp2	a0001	c0002	t0002	g0007	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01192	hp1	a0001	c0001	t0001	g0038	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01192	hp2	a0001	c0001	t0001	g0014	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01243	hp1	a0001	c0001	t0001	g0085	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01243	hp2	a0001	c0002	t0003	g0066	AMR	PUR	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01255	hp1	a0001	c0001	t0001	g0037	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01255	hp2	a0001	c0001	t0001	g0002	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01256	hp1	a0001	c0001	t0001	g0022	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01256	hp2	a0001	c0002	t0002	g0001	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01257	hp1	a0001	c0002	t0002	g0001	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01257	hp2	a0001	c0001	t0001	g0006	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01258	hp1	a0001	c0001	t0001	g0022	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01258	hp2	a0001	c0002	t0002	g0001	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01261	hp1	a0001	c0001	t0001	g0002	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01261	hp2	a0001	c0002	t0002	g0069	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01346	hp1	a0001	c0002	t0002	g0001	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01346	hp2	a0001	c0001	t0001	g0054	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01361	hp1	a0001	c0002	t0002	g0007	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01361	hp2	a0001	c0001	t0001	g0004	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01433	hp1	a0001	c0002	t0003	g0077	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01433	hp2	a0001	c0002	t0002	g0001	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01496	hp1	a0001	c0001	t0001	g0002	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01496	hp2	a0001	c0001	t0001	g0029	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01515	hp1	a0001	c0002	t0006	g0001	EUR	IBS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01515	hp2	a0001	c0001	t0001	g0006	EUR	IBS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01516	hp1	a0001	c0001	t0001	g0027	EUR	IBS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01516	hp2	a0001	c0002	t0002	g0001	EUR	IBS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01517	hp1	a0001	c0002	t0006	g0001	EUR	IBS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01517	hp2	a0001	c0002	t0002	g0001	EUR	IBS	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01884	hp1	a0001	c0005	t0001	g0026	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01884	hp2	a0002	c0003	t0004	g0089	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01891	hp1	a0001	c0001	t0005	g0018	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01891	hp2	a0001	c0001	t0001	g0006	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01928	hp1	a0001	c0002	t0003	g0003	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01928	hp2	a0001	c0002	t0003	g0008	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01934	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01934	hp2	a0001	c0001	t0001	g0009	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01943	hp2	a0001	c0001	t0001	g0002	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01952	hp1	a0001	c0002	t0003	g0003	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01952	hp2	a0001	c0002	t0002	g0007	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01978	hp1	a0001	c0001	t0001	g0004	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01978	hp2	a0001	c0002	t0003	g0003	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01981	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01981	hp2	a0002	c0003	t0004	g0012	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01993	hp1	a0001	c0001	t0001	g0009	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01993	hp2	a0001	c0002	t0002	g0001	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02004	hp1	a0001	c0002	t0003	g0003	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02004	hp2	a0001	c0001	t0001	g0006	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02015	hp1	a0001	c0002	t0002	g0001	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02015	hp2	a0001	c0002	t0003	g0003	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02027	hp1	a0001	c0001	t0001	g0002	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02027	hp2	a0001	c0002	t0003	g0003	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02040	hp1	a0001	c0002	t0002	g0025	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02040	hp2	a0001	c0002	t0002	g0003	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02055	hp1	a0001	c0001	t0001	g0027	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02055	hp2	a0001	c0002	t0003	g0035	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02071	hp1	a0001	c0002	t0002	g0033	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02071	hp2	a0001	c0001	t0001	g0002	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02074	hp1	a0001	c0002	t0002	g0007	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02074	hp2	a0001	c0002	t0003	g0003	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02080	hp1	a0011	c0009	t0002	g0001	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02080	hp2	a0001	c0002	t0003	g0011	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02083	hp1	a0001	c0002	t0003	g0100	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02083	hp2	a0001	c0002	t0002	g0001	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02129	hp1	a0001	c0001	t0001	g0002	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02129	hp2	a0001	c0002	t0002	g0021	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02132	hp1	a0001	c0002	t0003	g0008	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02132	hp2	a0001	c0001	t0001	g0002	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02145	hp1	a0002	c0003	t0004	g0013	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02145	hp2	a0001	c0001	t0001	g0047	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02148	hp1	a0001	c0001	t0001	g0004	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02148	hp2	a0001	c0001	t0001	g0009	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02155	hp1	a0001	c0002	t0003	g0003	EAS	CDX	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02155	hp2	a0001	c0002	t0003	g0003	EAS	CDX	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02165	hp1	a0001	c0002	t0002	g0025	EAS	CDX	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02165	hp2	a0001	c0002	t0002	g0001	EAS	CDX	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02257	hp1	a0001	c0002	t0002	g0007	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02257	hp2	a0001	c0001	t0001	g0005	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02273	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02273	hp2	a0001	c0002	t0002	g0001	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02280	hp1	a0002	c0003	t0004	g0013	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02280	hp2	a0001	c0001	t0001	g0005	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02293	hp1	a0001	c0002	t0003	g0016	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02293	hp2	a0001	c0001	t0001	g0002	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02300	hp1	a0001	c0002	t0003	g0008	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02300	hp2	a0001	c0002	t0002	g0001	AMR	PEL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02451	hp1	a0001	c0001	t0001	g0005	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02451	hp2	a0001	c0001	t0001	g0005	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02523	hp1	a0001	c0002	t0002	g0001	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02523	hp2	a0001	c0002	t0002	g0072	EAS	KHV	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02572	hp1	a0003	c0004	t0001	g0020	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02572	hp2	a0001	c0005	t0001	g0030	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02615	hp1	a0001	c0008	t0001	g0087	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02615	hp2	a0001	c0002	t0002	g0061	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02622	hp1	a0001	c0001	t0001	g0005	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02622	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02630	hp1	a0001	c0001	t0001	g0005	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02630	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02647	hp1	a0001	c0006	t0001	g0042	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02647	hp2	a0001	c0002	t0003	g0095	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02698	hp1	a0001	c0001	t0001	g0004	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02698	hp2	a0001	c0002	t0002	g0007	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02717	hp1	a0001	c0001	t0001	g0005	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02717	hp2	a0003	c0004	t0001	g0078	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02723	hp1	a0001	c0001	t0001	g0092	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02723	hp2	a0002	c0003	t0004	g0012	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02738	hp1	a0001	c0002	t0002	g0001	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02738	hp2	a0001	c0006	t0001	g0062	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02809	hp1	a0002	c0003	t0004	g0090	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02809	hp2	a0001	c0001	t0001	g0083	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02818	hp1	a0001	c0001	t0001	g0006	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02818	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02895	hp1	a0007	c0014	t0001	g0014	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02895	hp2	a0001	c0001	t0001	g0006	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02896	hp1	a0001	c0001	t0001	g0006	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02896	hp2	a0001	c0005	t0001	g0046	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02922	hp1	a0001	c0001	t0001	g0005	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02922	hp2	a0001	c0002	t0003	g0023	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02965	hp1	a0001	c0001	t0001	g0094	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02965	hp2	a0001	c0002	t0003	g0023	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02970	hp1	a0001	c0001	t0001	g0005	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02970	hp2	a0001	c0005	t0001	g0081	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02976	hp1	a0001	c0001	t0001	g0005	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02976	hp2	a0001	c0001	t0001	g0005	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03017	hp1	a0001	c0002	t0003	g0016	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03017	hp2	a0001	c0001	t0001	g0004	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03041	hp1	a0001	c0002	t0009	g0008	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03041	hp2	a0001	c0001	t0001	g0093	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03098	hp1	a0001	c0001	t0001	g0067	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03098	hp2	a0003	c0004	t0001	g0057	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03130	hp1	a0001	c0001	t0001	g0005	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03130	hp2	a0002	c0003	t0004	g0013	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03139	hp1	a0001	c0001	t0001	g0080	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03139	hp2	a0001	c0001	t0007	g0053	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03195	hp1	a0009	c0013	t0011	g0056	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03195	hp2	a0001	c0005	t0001	g0026	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03209	hp1	a0002	c0003	t0004	g0088	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03209	hp2	a0001	c0001	t0001	g0014	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03225	hp1	a0001	c0001	t0001	g0005	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03225	hp2	a0001	c0001	t0001	g0075	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03239	hp1	a0001	c0001	t0001	g0032	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03239	hp2	a0001	c0001	t0001	g0029	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03453	hp1	a0001	c0001	t0001	g0006	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03453	hp2	a0001	c0001	t0001	g0005	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03486	hp1	a0003	c0004	t0001	g0020	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03486	hp2	a0002	c0003	t0004	g0012	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03490	hp1	a0001	c0001	t0001	g0004	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03490	hp2	a0001	c0001	t0001	g0006	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03491	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03491	hp2	a0001	c0002	t0002	g0001	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03492	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03492	hp2	a0001	c0001	t0001	g0004	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03516	hp1	a0002	c0003	t0004	g0013	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03516	hp2	a0001	c0001	t0001	g0071	AFR	ESN	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03540	hp1	a0001	c0002	t0003	g0023	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03540	hp2	a0001	c0002	t0003	g0008	AFR	GWD	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03579	hp1	a0002	c0003	t0004	g0012	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03579	hp2	a0001	c0001	t0001	g0005	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03654	hp1	a0001	c0001	t0001	g0065	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03654	hp2	a0001	c0002	t0003	g0008	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03669	hp1	a0001	c0002	t0003	g0016	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03669	hp2	a0001	c0001	t0001	g0006	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03688	hp1	a0001	c0002	t0003	g0003	SAS	STU	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03688	hp2	a0001	c0006	t0001	g0043	SAS	STU	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03704	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03704	hp2	a0001	c0001	t0001	g0039	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03710	hp1	a0001	c0001	t0001	g0039	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03710	hp2	a0001	c0001	t0001	g0004	SAS	PJL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03831	hp1	a0001	c0001	t0001	g0004	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03831	hp2	a0001	c0002	t0002	g0007	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03834	hp2	a0001	c0002	t0002	g0033	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03927	hp1	a0001	c0001	t0001	g0005	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03927	hp2	a0001	c0002	t0003	g0084	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03942	hp1	a0001	c0002	t0003	g0070	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03942	hp2	a0001	c0001	t0001	g0004	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG04184	hp1	a0001	c0001	t0001	g0027	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG04184	hp2	a0001	c0002	t0003	g0011	SAS	BEB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG04199	hp1	a0001	c0001	t0001	g0034	SAS	STU	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG04199	hp2	a0001	c0001	t0001	g0024	SAS	STU	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG04204	hp1	a0001	c0002	t0002	g0001	SAS	STU	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG04204	hp2	a0001	c0001	t0001	g0002	SAS	STU	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG04228	hp1	a0001	c0001	t0001	g0004	SAS	STU	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG04228	hp2	a0001	c0001	t0001	g0006	SAS	STU	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18522	hp1	a0001	c0005	t0001	g0026	AFR	YRI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18522	hp2	a0001	c0001	t0001	g0005	AFR	YRI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18612	hp1	a0001	c0002	t0003	g0003	EAS	CHB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18612	hp2	a0001	c0001	t0001	g0002	EAS	CHB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18747	hp1	a0001	c0002	t0003	g0003	EAS	CHB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18747	hp2	a0001	c0001	t0001	g0028	EAS	CHB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18906	hp1	a0001	c0005	t0001	g0086	AFR	YRI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18906	hp2	a0001	c0008	t0001	g0107	AFR	YRI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18939	hp1	a0001	c0001	t0001	g0074	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18939	hp2	a0001	c0002	t0003	g0098	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18941	hp1	a0001	c0001	t0001	g0024	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18941	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18942	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18942	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18943	hp1	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18943	hp2	a0001	c0001	t0001	g0034	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18945	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18945	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18946	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18946	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18947	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18947	hp2	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18948	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18948	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18949	hp1	a0001	c0002	t0003	g0011	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18949	hp2	a0001	c0002	t0002	g0021	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18950	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18950	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18951	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18951	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18952	hp1	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18952	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18953	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18953	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18954	hp1	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18954	hp2	a0001	c0002	t0002	g0050	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18956	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18956	hp2	a0001	c0002	t0003	g0017	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18957	hp1	a0001	c0002	t0002	g0076	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18957	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18959	hp1	a0001	c0001	t0001	g0015	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18959	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18960	hp1	a0001	c0002	t0003	g0017	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18960	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18962	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18962	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18963	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18963	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18964	hp1	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18964	hp2	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18965	hp1	a0010	c0012	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18965	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18966	hp1	a0001	c0001	t0001	g0009	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18966	hp2	a0001	c0002	t0003	g0096	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18967	hp1	a0001	c0002	t0003	g0101	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18967	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18968	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18968	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18969	hp1	a0001	c0002	t0003	g0103	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18969	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18971	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18971	hp2	a0001	c0002	t0003	g0017	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18972	hp1	a0001	c0001	t0001	g0049	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18972	hp2	a0001	c0002	t0003	g0031	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18973	hp1	a0001	c0001	t0001	g0068	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18973	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18974	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18974	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18977	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18977	hp2	a0001	c0002	t0003	g0010	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18979	hp1	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18979	hp2	a0001	c0001	t0001	g0009	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18980	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18980	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18982	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18982	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18983	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18983	hp2	a0005	c0010	t0003	g0104	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18986	hp1	a0001	c0002	t0003	g0010	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18986	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18988	hp1	a0001	c0002	t0002	g0064	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18988	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18991	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18991	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18992	hp1	a0001	c0001	t0001	g0004	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18992	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18993	hp1	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18993	hp2	a0001	c0001	t0001	g0015	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18997	hp1	a0001	c0002	t0003	g0097	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18997	hp2	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18999	hp1	a0001	c0001	t0001	g0040	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18999	hp2	a0001	c0002	t0003	g0011	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19000	hp1	a0001	c0002	t0003	g0105	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19000	hp2	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19001	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19001	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19003	hp1	a0001	c0001	t0001	g0044	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19003	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19005	hp1	a0001	c0002	t0003	g0008	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19005	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19006	hp1	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19006	hp2	a0001	c0001	t0001	g0055	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19009	hp1	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19009	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19010	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19010	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19011	hp1	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19011	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19012	hp1	a0001	c0001	t0001	g0051	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19012	hp2	a0001	c0002	t0002	g0073	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19030	hp1	a0008	c0015	t0001	g0037	AFR	LWK	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19030	hp2	a0001	c0002	t0003	g0035	AFR	LWK	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19043	hp1	a0001	c0001	t0001	g0019	AFR	LWK	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19043	hp2	a0003	c0004	t0008	g0020	AFR	LWK	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19055	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19055	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19056	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19056	hp2	a0001	c0002	t0003	g0016	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19057	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19057	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19058	hp1	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19058	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19062	hp1	a0001	c0001	t0001	g0015	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19062	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19063	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19063	hp2	a0001	c0002	t0003	g0011	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19064	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19064	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19065	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19065	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19066	hp1	a0001	c0001	t0001	g0009	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19066	hp2	a0001	c0002	t0003	g0011	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19067	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19067	hp2	a0001	c0002	t0002	g0007	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19068	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19068	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19070	hp1	a0001	c0002	t0002	g0021	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19070	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19074	hp1	a0001	c0001	t0001	g0015	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19074	hp2	a0001	c0002	t0003	g0008	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19075	hp1	a0001	c0001	t0001	g0052	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19075	hp2	a0001	c0002	t0003	g0010	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19076	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19076	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19077	hp1	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19077	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19079	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19079	hp2	a0001	c0002	t0003	g0008	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19081	hp1	a0001	c0002	t0002	g0058	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19081	hp2	a0001	c0002	t0003	g0010	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19083	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19083	hp2	a0001	c0001	t0001	g0009	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19084	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19084	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19085	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19085	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19086	hp1	a0001	c0001	t0001	g0045	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19086	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19087	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19087	hp2	a0001	c0002	t0003	g0017	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19088	hp1	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19088	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19089	hp1	a0001	c0002	t0003	g0099	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19089	hp2	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19090	hp1	a0001	c0002	t0003	g0010	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19090	hp2	a0001	c0002	t0003	g0003	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19091	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19091	hp2	a0001	c0001	t0001	g0048	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19240	hp1	a0001	c0001	t0001	g0019	AFR	YRI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA19240	hp2	a0001	c0002	t0003	g0001	AFR	YRI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20129	hp1	a0001	c0001	t0001	g0019	AFR	ASW	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20129	hp2	a0001	c0001	t0001	g0005	AFR	ASW	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20752	hp1	a0001	c0001	t0001	g0032	EUR	TSI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20752	hp2	a0001	c0001	t0001	g0002	EUR	TSI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20805	hp1	a0001	c0001	t0001	g0006	EUR	TSI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20805	hp2	a0001	c0002	t0003	g0003	EUR	TSI	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20905	hp1	a0001	c0002	t0003	g0003	SAS	GIH	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20905	hp2	a0001	c0001	t0001	g0004	SAS	GIH	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01123	hp1	a0001	c0002	t0002	g0060	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG01123	hp2	a0001	c0001	t0001	g0059	AMR	CLM	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02109	hp1	a0001	c0002	t0002	g0063	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02109	hp2	a0001	c0001	t0001	g0014	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02486	hp1	a0002	c0003	t0004	g0012	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02486	hp2	a0001	c0001	t0005	g0018	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02559	hp1	a0003	c0004	t0001	g0079	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG02559	hp2	a0001	c0002	t0003	g0008	AFR	ACB	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03471	hp1	a0001	c0005	t0001	g0030	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG03471	hp2	a0003	c0004	t0001	g0036	AFR	MSL	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG06807	hp1	a0002	c0003	t0004	g0013	AFR	USA	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
HG06807	hp2	a0001	c0001	t0001	g0006	AFR	USA	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18955	hp1	a0001	c0002	t0002	g0001	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA18955	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20300	hp1	a0001	c0002	t0003	g0001	AFR	USA	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA20300	hp2	a0001	c0001	t0001	g0004	AFR	USA	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA21309	hp1	a0001	c0001	t0001	g0002	AFR	LWK	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
NA21309	hp2	a0006	c0011	t0003	g0001	AFR	LWK	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0006	REF	REF	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0002	REF	REF	SPP1_chr4_87970714_87988411	SPP1	chr4	87970714	87988411

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr4:87981496	G G	A A	1	a0011 a0011	1	HG02080.hp1 HG02080.hp1	missense_variant	MODERATE	c.238G>A c.238G>A	p.Glu80Lys p.Glu80Lys	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/7	339/1561	238/945	80/314	chr4	87981496
chr4:87981552	C C	A A	1	a0010 a0010	1	NA18965.hp1 NA18965.hp1	missense_variant	MODERATE	c.294C>A c.294C>A	p.Asp98Glu p.Asp98Glu	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/7	395/1561	294/945	98/314	chr4	87981552
chr4:87981781	C C	A A	1	a0009 a0009	1	HG03195.hp1 HG03195.hp1	missense_variant	MODERATE	c.523C>A c.523C>A	p.Arg175Ser p.Arg175Ser	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/7	624/1561	523/945	175/314	chr4	87981781
chr4:87982494	C C	A A	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	stop_gained&splice_region_variant	HIGH	c.543C>A c.543C>A	p.Tyr181* p.Tyr181*	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	644/1561	543/945	181/314	chr4	87982494
chr4:87982495	C C	A A	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.544C>A c.544C>A	p.Pro182Thr p.Pro182Thr	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	645/1561	544/945	182/314	chr4	87982495
chr4:87982495	C C	G G	1	a0006 a0006	1	NA21309.hp2 NA21309.hp2	missense_variant	MODERATE	c.544C>G c.544C>G	p.Pro182Ala p.Pro182Ala	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	645/1561	544/945	182/314	chr4	87982495
chr4:87982496	C C	T T	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.545C>T c.545C>T	p.Pro182Leu p.Pro182Leu	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	646/1561	545/945	182/314	chr4	87982496
chr4:87982507	G G	A A	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.556G>A c.556G>A	p.Asp186Asn p.Asp186Asn	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	657/1561	556/945	186/314	chr4	87982507
chr4:87982509	C C	A A	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.558C>A c.558C>A	p.Asp186Glu p.Asp186Glu	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	659/1561	558/945	186/314	chr4	87982509
chr4:87982510	G G	A A	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.559G>A c.559G>A	p.Glu187Lys p.Glu187Lys	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	660/1561	559/945	187/314	chr4	87982510
chr4:87982512	G G	T T	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.561G>T c.561G>T	p.Glu187Asp p.Glu187Asp	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	662/1561	561/945	187/314	chr4	87982512
chr4:87982513	G G	T T	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.562G>T c.562G>T	p.Asp188Tyr p.Asp188Tyr	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	663/1561	562/945	188/314	chr4	87982513
chr4:87982515	C C	A A	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.564C>A c.564C>A	p.Asp188Glu p.Asp188Glu	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	665/1561	564/945	188/314	chr4	87982515
chr4:87982520	C C	T T	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.569C>T c.569C>T	p.Thr190Ile p.Thr190Ile	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	670/1561	569/945	190/314	chr4	87982520
chr4:87982523	C C	A A	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	stop_gained	HIGH	c.572C>A c.572C>A	p.Ser191* p.Ser191*	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	673/1561	572/945	191/314	chr4	87982523
chr4:87982525	C C	T T	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.574C>T c.574C>T	p.His192Tyr p.His192Tyr	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	675/1561	574/945	192/314	chr4	87982525
chr4:87982530	G G	T T	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.579G>T c.579G>T	p.Met193Ile p.Met193Ile	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	680/1561	579/945	193/314	chr4	87982530
chr4:87982531	G G	T T	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	stop_gained	HIGH	c.580G>T c.580G>T	p.Glu194* p.Glu194*	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	681/1561	580/945	194/314	chr4	87982531
chr4:87982542	G G	T T	1	a0005 a0005	1	NA18983.hp2 NA18983.hp2	missense_variant	MODERATE	c.591G>T c.591G>T	p.Glu197Asp p.Glu197Asp	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	692/1561	591/945	197/314	chr4	87982542
chr4:87982610	G G	A A	1	a0007 a0007	1	HG02895.hp1 HG02895.hp1	missense_variant	MODERATE	c.659G>A c.659G>A	p.Arg220His p.Arg220His	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	760/1561	659/945	220/314	chr4	87982610
chr4:87982622	G G	A A	1	a0003 a0003	8	HG01069.hp1 HG02559.hp1 HG02572.hp1 others(5): Show HG01069.hp1 HG02559.hp1 HG02572.hp1 HG02717.hp2 HG03098.hp2 HG03471.hp2 HG03486.hp1 NA19043.hp2	missense_variant	MODERATE	c.671G>A c.671G>A	p.Ser224Asn p.Ser224Asn	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	772/1561	671/945	224/314	chr4	87982622
chr4:87982673	A A	G G	1	a0008 a0008	1	NA19030.hp1 NA19030.hp1	missense_variant	MODERATE	c.722A>G c.722A>G	p.Lys241Arg p.Lys241Arg	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	823/1561	722/945	241/314	chr4	87982673
chr4:87982763	G G	A A	1	a0004 a0004	2	HG01070.hp1 HG01071.hp1 HG01070.hp1 HG01071.hp1	missense_variant	MODERATE	c.812G>A c.812G>A	p.Arg271His p.Arg271His	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	913/1561	812/945	271/314	chr4	87982763
chr4:87982853	G G	A A	1	a0002 a0002	13	HG01884.hp2 HG01981.hp2 HG02145.hp1 others(10): Show HG01884.hp2 HG01981.hp2 HG02145.hp1 HG02280.hp1 HG02486.hp1 HG02723.hp2 HG02809.hp1 HG03130.hp2 HG03209.hp1 HG03486.hp2 HG03516.hp1 HG03579.hp1 HG06807.hp1	missense_variant	MODERATE	c.902G>A c.902G>A	p.Arg301His p.Arg301His	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	1003/1561	902/945	301/314	chr4	87982853

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr4:87980078	A A	G G	1	a0001c0008 a0001c0008	2	HG02615.hp1 NA18906.hp2 HG02615.hp1 NA18906.hp2	synonymous_variant	LOW	c.126A>G c.126A>G	p.Thr42Thr p.Thr42Thr	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	4/7	227/1561	126/945	42/314	chr4	87980078
chr4:87981540	T T	C C	4	a0001c0002 a0005c0010 a0006c0011 others(1): Show a0001c0002 a0005c0010 a0006c0011 a0011c0009	196	HG00099.hp1 HG00099.hp2 HG00408.hp1 others(193): Show HG00099.hp1 HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01099.hp1 HG01123.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02647.hp2 HG02698.hp2 HG02738.hp1 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03041.hp1 HG03491.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04184.hp2 HG04204.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp2 NA18993.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp2	synonymous_variant	LOW	c.282T>C c.282T>C	p.Asp94Asp p.Asp94Asp	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/7	383/1561	282/945	94/314	chr4	87981540
chr4:87981573	G G	A A	2	a0001c0005 a0003c0004 a0001c0005 a0003c0004	16	HG01069.hp1 HG01884.hp1 HG02559.hp1 others(13): Show HG01069.hp1 HG01884.hp1 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02717.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03195.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 NA18522.hp1 NA18906.hp1 NA19043.hp2	synonymous_variant	LOW	c.315G>A c.315G>A	p.Ser105Ser p.Ser105Ser	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/7	416/1561	315/945	105/314	chr4	87981573
chr4:87981699	T T	C C	1	a0001c0006 a0001c0006	3	HG02647.hp1 HG02738.hp2 HG03688.hp2 HG02647.hp1 HG02738.hp2 HG03688.hp2	synonymous_variant	LOW	c.441T>C c.441T>C	p.Thr147Thr p.Thr147Thr	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/7	542/1561	441/945	147/314	chr4	87981699
chr4:87982518	C C	T T	1	a0005c0010 a0005c0010	1	NA18983.hp2 NA18983.hp2	synonymous_variant	LOW	c.567C>T c.567C>T	p.Ile189Ile p.Ile189Ile	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	668/1561	567/945	189/314	chr4	87982518
chr4:87982521	C C	G G	1	a0005c0010 a0005c0010	1	NA18983.hp2 NA18983.hp2	synonymous_variant	LOW	c.570C>G c.570C>G	p.Thr190Thr p.Thr190Thr	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	671/1561	570/945	190/314	chr4	87982521
chr4:87982527	C C	T T	1	a0005c0010 a0005c0010	1	NA18983.hp2 NA18983.hp2	synonymous_variant	LOW	c.576C>T c.576C>T	p.His192His p.His192His	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	677/1561	576/945	192/314	chr4	87982527
chr4:87982701	C C	T T	4	a0001c0002 a0005c0010 a0006c0011 others(1): Show a0001c0002 a0005c0010 a0006c0011 a0011c0009	196	HG00099.hp1 HG00099.hp2 HG00408.hp1 others(193): Show HG00099.hp1 HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01099.hp1 HG01123.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02647.hp2 HG02698.hp2 HG02738.hp1 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03041.hp1 HG03491.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04184.hp2 HG04204.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp2 NA18993.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp2	synonymous_variant	LOW	c.750C>T c.750C>T	p.Ala250Ala p.Ala250Ala	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	851/1561	750/945	250/314	chr4	87982701

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr4:87975728	G G	A A	1	a0001c0001t0005 a0001c0001t0005	3	HG00639.hp1 HG01891.hp1 HG02486.hp2 HG00639.hp1 HG01891.hp1 HG02486.hp2	5_prime_UTR_variant	MODIFIER	c.-87G>A c.-87G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/7	1168	chr4	87975728
chr4:87975763	A A	G G	1	a0009c0013t0011 a0009c0013t0011	1	HG03195.hp1 HG03195.hp1	5_prime_UTR_variant	MODIFIER	c.-52A>G c.-52A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/7	1133	chr4	87975763
chr4:87983034	A A	G G	3	a0001c0002t0002 a0001c0002t0006 a0011c0009t0002 a0001c0002t0002 a0001c0002t0006 a0011c0009t0002	105	HG00099.hp2 HG00408.hp1 HG00408.hp2 others(102): Show HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00642.hp2 HG01070.hp2 HG01099.hp1 HG01123.hp1 HG01175.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01952.hp2 HG01993.hp2 HG02015.hp1 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp2 HG02698.hp2 HG02738.hp1 HG03491.hp2 HG03831.hp2 HG03834.hp2 HG04204.hp1 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18980.hp2 NA18982.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18992.hp2 NA18993.hp1 NA18997.hp2 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19006.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19076.hp1 NA19076.hp2 NA19081.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19089.hp2	3_prime_UTR_variant	MODIFIER	c.138A>G c.138A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	138	chr4	87983034
chr4:87983067	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.171C>T c.171C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	171	chr4	87983067
chr4:87983068	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.172A>T c.172A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	172	chr4	87983068
chr4:87983070	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.174G>T c.174G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	174	chr4	87983070
chr4:87983071	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.175G>T c.175G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	175	chr4	87983071
chr4:87983072	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.176A>T c.176A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	176	chr4	87983072
chr4:87983073	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.177A>T c.177A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	177	chr4	87983073
chr4:87983074	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.178A>T c.178A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	178	chr4	87983074
chr4:87983075	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.179C>T c.179C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	179	chr4	87983075
chr4:87983077	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.181C>T c.181C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	181	chr4	87983077
chr4:87983078	C C	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.182C>A c.182C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	182	chr4	87983078
chr4:87983079	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.183C>T c.183C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	183	chr4	87983079
chr4:87983081	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.185G>T c.185G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	185	chr4	87983081
chr4:87983083	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.187A>T c.187A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	187	chr4	87983083
chr4:87983086	C C	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.190C>A c.190C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	190	chr4	87983086
chr4:87983087	T T	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.191T>A c.191T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	191	chr4	87983087
chr4:87983092	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.196G>T c.196G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	196	chr4	87983092
chr4:87983093	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.197C>T c.197C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	197	chr4	87983093
chr4:87983096	C C	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.200C>A c.200C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	200	chr4	87983096
chr4:87983098	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.202G>A c.202G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	202	chr4	87983098
chr4:87983099	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.203G>A c.203G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	203	chr4	87983099
chr4:87983100	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.204G>T c.204G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	204	chr4	87983100
chr4:87983103	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.207A>T c.207A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	207	chr4	87983103
chr4:87983105	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.209G>T c.209G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	209	chr4	87983105
chr4:87983107	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.211C>T c.211C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	211	chr4	87983107
chr4:87983109	A A	G G	1	a0001c0002t0006 a0001c0002t0006	2	HG01515.hp1 HG01517.hp1 HG01515.hp1 HG01517.hp1	3_prime_UTR_variant	MODIFIER	c.213A>G c.213A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	213	chr4	87983109
chr4:87983109	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.213A>T c.213A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	213	chr4	87983109
chr4:87983111	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.215G>T c.215G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	215	chr4	87983111
chr4:87983114	C C	G G	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.218C>G c.218C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	218	chr4	87983114
chr4:87983116	T T	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.220T>A c.220T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	220	chr4	87983116
chr4:87983120	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.224A>T c.224A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	224	chr4	87983120
chr4:87983123	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.227G>A c.227G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	227	chr4	87983123
chr4:87983124	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.228A>T c.228A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	228	chr4	87983124
chr4:87983125	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.229A>T c.229A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	229	chr4	87983125
chr4:87983126	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.230G>T c.230G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	230	chr4	87983126
chr4:87983127	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.231A>T c.231A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	231	chr4	87983127
chr4:87983131	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.235G>T c.235G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	235	chr4	87983131
chr4:87983132	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.236C>T c.236C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	236	chr4	87983132
chr4:87983133	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.237A>T c.237A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	237	chr4	87983133
chr4:87983136	C C	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.240C>A c.240C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	240	chr4	87983136
chr4:87983137	T T	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.241T>A c.241T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	241	chr4	87983137
chr4:87983140	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.244C>T c.244C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	244	chr4	87983140
chr4:87983141	A A	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.245A>T c.245A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	245	chr4	87983141
chr4:87983142	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.246C>T c.246C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	246	chr4	87983142
chr4:87983190	A A	C C	7	a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 others(4): Show a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0009 a0005c0010t0003 a0006c0011t0003 a0011c0009t0002	196	HG00099.hp1 HG00099.hp2 HG00408.hp1 others(193): Show HG00099.hp1 HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01099.hp1 HG01123.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02647.hp2 HG02698.hp2 HG02738.hp1 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03041.hp1 HG03491.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04184.hp2 HG04204.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp2 NA18993.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.294A>C c.294A>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	294	chr4	87983190
chr4:87983210	C C	T T	1	a0003c0004t0008 a0003c0004t0008	1	NA19043.hp2 NA19043.hp2	3_prime_UTR_variant	MODIFIER	c.314C>T c.314C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	314	chr4	87983210
chr4:87983301	G G	A A	1	a0001c0002t0009 a0001c0002t0009	1	HG03041.hp1 HG03041.hp1	3_prime_UTR_variant	MODIFIER	c.405G>A c.405G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	405	chr4	87983301
chr4:87983368	C C	T T	1	a0001c0001t0007 a0001c0001t0007	1	HG03139.hp2 HG03139.hp2	3_prime_UTR_variant	MODIFIER	c.472C>T c.472C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	472	chr4	87983368
chr4:87983394	A A	T T	1	a0002c0003t0004 a0002c0003t0004	13	HG01884.hp2 HG01981.hp2 HG02145.hp1 others(10): Show HG01884.hp2 HG01981.hp2 HG02145.hp1 HG02280.hp1 HG02486.hp1 HG02723.hp2 HG02809.hp1 HG03130.hp2 HG03209.hp1 HG03486.hp2 HG03516.hp1 HG03579.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.498A>T c.498A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	7/7	498	chr4	87983394

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr4:87975930	C C	T T	1	a0001c0008t0001g0107 a0001c0008t0001g0107	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.-15+130C>T c.-15+130C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87975930
chr4:87975954	C C	CTG CTG	42	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0014 others(39): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0027 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0106 a0001c0001t0010g0006 a0001c0002t0002g0003 a0001c0002t0002g0102 a0001c0002t0003g0003 a0001c0002t0003g0011 a0001c0002t0003g0017 a0001c0002t0003g0084 a0001c0002t0003g0095 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0098 a0001c0002t0003g0099 a0001c0002t0003g0100 a0001c0002t0003g0101 a0001c0002t0003g0103 a0001c0002t0003g0105 a0001c0005t0001g0026 a0001c0005t0001g0081 a0001c0005t0001g0086 a0001c0008t0001g0087 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0005c0010t0003g0104 a0007c0014t0001g0014 a0008c0015t0001g0037	137	HG00140.hp2 HG00323.hp1 HG00438.hp2 others(134): Show HG00140.hp2 HG00323.hp1 HG00438.hp2 HG00621.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01099.hp2 HG01109.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp2 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01952.hp1 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03490.hp2 HG03516.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18941.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18974.hp2 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18991.hp2 NA18997.hp1 NA18999.hp2 NA19000.hp1 NA19009.hp1 NA19011.hp2 NA19030.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19077.hp1 NA19077.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA20129.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-15+155_-15+156dup others(2): Show c.-15+155_-15+156dupTG	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6	INFO_REALIGN_3_PRIME	chr4	87975954
chr4:87976028	A A	G G	1	a0001c0002t0002g0025 a0001c0002t0002g0025	3	HG00558.hp2 HG02040.hp1 HG02165.hp1 HG00558.hp2 HG02040.hp1 HG02165.hp1	intron_variant	MODIFIER	c.-15+228A>G c.-15+228A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976028
chr4:87976034	C C	T T	1	a0001c0001t0001g0080 a0001c0001t0001g0080	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.-15+234C>T c.-15+234C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976034
chr4:87976045	G G	A A	1	a0001c0005t0001g0081 a0001c0005t0001g0081	1	HG02970.hp2 HG02970.hp2	intron_variant	MODIFIER	c.-15+245G>A c.-15+245G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976045
chr4:87976145	TC TC	T T	3	a0003c0004t0001g0036 a0003c0004t0001g0078 a0003c0004t0001g0079 a0003c0004t0001g0036 a0003c0004t0001g0078 a0003c0004t0001g0079	4	HG01069.hp1 HG02559.hp1 HG02717.hp2 others(1): Show HG01069.hp1 HG02559.hp1 HG02717.hp2 HG03471.hp2	intron_variant	MODIFIER	c.-15+346delC c.-15+346delC	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976145
chr4:87976203	T T	G G	1	a0001c0001t0001g0082 a0001c0001t0001g0082	1	HG01109.hp1 HG01109.hp1	intron_variant	MODIFIER	c.-15+403T>G c.-15+403T>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976203
chr4:87976231	G G	A A	1	a0001c0001t0001g0083 a0001c0001t0001g0083	1	HG02809.hp2 HG02809.hp2	intron_variant	MODIFIER	c.-15+431G>A c.-15+431G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976231
chr4:87976286	G G	A A	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	NA18999.hp1 NA18999.hp1	intron_variant	MODIFIER	c.-15+486G>A c.-15+486G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976286
chr4:87976307	G G	C C	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	HG03927.hp2 HG03927.hp2	intron_variant	MODIFIER	c.-15+507G>C c.-15+507G>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976307
chr4:87976320	C C	T T	1	a0001c0002t0003g0077 a0001c0002t0003g0077	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.-15+520C>T c.-15+520C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976320
chr4:87976476	A A	T T	1	a0002c0003t0004g0012 a0002c0003t0004g0012	5	HG01981.hp2 HG02486.hp1 HG02723.hp2 others(2): Show HG01981.hp2 HG02486.hp1 HG02723.hp2 HG03486.hp2 HG03579.hp1	intron_variant	MODIFIER	c.-14-406A>T c.-14-406A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976476
chr4:87976548	A A	G G	1	a0001c0001t0001g0080 a0001c0001t0001g0080	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.-14-334A>G c.-14-334A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976548
chr4:87976590	A A	C C	1	a0001c0008t0001g0107 a0001c0008t0001g0107	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.-14-292A>C c.-14-292A>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976590
chr4:87976662	C C	T T	43	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0014 others(40): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0027 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0106 a0001c0001t0010g0006 a0001c0002t0002g0003 a0001c0002t0002g0076 a0001c0002t0002g0102 a0001c0002t0003g0003 a0001c0002t0003g0011 a0001c0002t0003g0017 a0001c0002t0003g0084 a0001c0002t0003g0095 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0098 a0001c0002t0003g0099 a0001c0002t0003g0100 a0001c0002t0003g0101 a0001c0002t0003g0103 a0001c0002t0003g0105 a0001c0005t0001g0026 a0001c0005t0001g0081 a0001c0005t0001g0086 a0001c0008t0001g0087 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0005c0010t0003g0104 a0007c0014t0001g0014 a0008c0015t0001g0037	138	HG00140.hp2 HG00323.hp1 HG00438.hp2 others(135): Show HG00140.hp2 HG00323.hp1 HG00438.hp2 HG00621.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01099.hp2 HG01109.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp2 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01952.hp1 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03490.hp2 HG03516.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18941.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18974.hp2 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18991.hp2 NA18997.hp1 NA18999.hp2 NA19000.hp1 NA19009.hp1 NA19011.hp2 NA19030.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19077.hp1 NA19077.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA20129.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-14-220C>T c.-14-220C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976662
chr4:87976728	A A	G G	20	a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 others(17): Show a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0106 a0001c0002t0002g0003 a0001c0002t0002g0102 a0001c0002t0003g0003 a0001c0002t0003g0011 a0001c0002t0003g0017 a0001c0002t0003g0084 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0098 a0001c0002t0003g0099 a0001c0002t0003g0100 a0001c0002t0003g0101 a0001c0002t0003g0103 a0001c0002t0003g0105 a0005c0010t0003g0104 a0008c0015t0001g0037	63	HG00323.hp1 HG00438.hp2 HG00621.hp1 others(60): Show HG00323.hp1 HG00438.hp2 HG00621.hp1 HG00642.hp1 HG01192.hp1 HG01255.hp1 HG01928.hp1 HG01952.hp1 HG01978.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02155.hp1 HG02155.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG04184.hp2 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18974.hp2 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18991.hp2 NA18997.hp1 NA18999.hp2 NA19000.hp1 NA19009.hp1 NA19011.hp2 NA19030.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19077.hp1 NA19077.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA20805.hp2 NA20905.hp1	intron_variant	MODIFIER	c.-14-154A>G c.-14-154A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976728
chr4:87976783	A A	G G	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG03225.hp2 HG03225.hp2	intron_variant	MODIFIER	c.-14-99A>G c.-14-99A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	1/6		chr4	87976783
chr4:87977240	A A	C C	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	NA18939.hp1 NA18939.hp1	intron_variant	MODIFIER	c.93+143A>C c.93+143A>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87977240
chr4:87977395	C C	A A	1	a0001c0002t0002g0041 a0001c0002t0002g0041	1	HG01099.hp1 HG01099.hp1	intron_variant	MODIFIER	c.93+298C>A c.93+298C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87977395
chr4:87977424	C C	T T	1	a0002c0003t0004g0012 a0002c0003t0004g0012	5	HG01981.hp2 HG02486.hp1 HG02723.hp2 others(2): Show HG01981.hp2 HG02486.hp1 HG02723.hp2 HG03486.hp2 HG03579.hp1	intron_variant	MODIFIER	c.93+327C>T c.93+327C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87977424
chr4:87977765	A A	G G	1	a0001c0002t0002g0073 a0001c0002t0002g0073	1	NA19012.hp2 NA19012.hp2	intron_variant	MODIFIER	c.93+668A>G c.93+668A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87977765
chr4:87977789	C C	T T	43	a0001c0001t0001g0004 a0001c0001t0001g0022 a0001c0001t0001g0024 others(40): Show a0001c0001t0001g0004 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0059 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0074 a0001c0002t0002g0001 a0001c0002t0002g0007 a0001c0002t0002g0021 a0001c0002t0002g0025 a0001c0002t0002g0033 a0001c0002t0002g0041 a0001c0002t0002g0058 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0063 a0001c0002t0002g0064 a0001c0002t0002g0069 a0001c0002t0002g0072 a0001c0002t0002g0073 a0001c0002t0002g0076 a0001c0002t0003g0001 a0001c0002t0003g0008 a0001c0002t0003g0010 a0001c0002t0003g0016 a0001c0002t0003g0023 a0001c0002t0003g0031 a0001c0002t0003g0035 a0001c0002t0003g0066 a0001c0002t0003g0070 a0001c0002t0003g0077 a0001c0002t0003g0095 a0001c0002t0006g0001 a0001c0002t0009g0008 a0001c0006t0001g0062 a0006c0011t0003g0001 a0011c0009t0002g0001	180	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(177): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp2 HG01952.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02738.hp1 HG02738.hp2 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03239.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 NA18939.hp1 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18955.hp1 NA18957.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18977.hp2 NA18980.hp2 NA18982.hp1 NA18986.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18997.hp2 NA18999.hp1 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19030.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19089.hp2 NA19090.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp2 NA21309.hp2	intron_variant	MODIFIER	c.93+692C>T c.93+692C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87977789
chr4:87977803	C C	T T	1	a0001c0002t0002g0072 a0001c0002t0002g0072	1	HG02523.hp2 HG02523.hp2	intron_variant	MODIFIER	c.93+706C>T c.93+706C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87977803
chr4:87978013	C C	T T	6	a0003c0004t0001g0020 a0003c0004t0001g0036 a0003c0004t0001g0057 others(3): Show a0003c0004t0001g0020 a0003c0004t0001g0036 a0003c0004t0001g0057 a0003c0004t0001g0078 a0003c0004t0001g0079 a0003c0004t0008g0020	8	HG01069.hp1 HG02559.hp1 HG02572.hp1 others(5): Show HG01069.hp1 HG02559.hp1 HG02572.hp1 HG02717.hp2 HG03098.hp2 HG03471.hp2 HG03486.hp1 NA19043.hp2	intron_variant	MODIFIER	c.93+916C>T c.93+916C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978013
chr4:87978030	T T	A A	2	a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0096 a0001c0002t0003g0097	2	NA18966.hp2 NA18997.hp1 NA18966.hp2 NA18997.hp1	intron_variant	MODIFIER	c.93+933T>A c.93+933T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978030
chr4:87978067	G G	T T	1	a0001c0001t0001g0080 a0001c0001t0001g0080	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.93+970G>T c.93+970G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978067
chr4:87978087	G G	A A	1	a0001c0001t0001g0085 a0001c0001t0001g0085	1	HG01243.hp1 HG01243.hp1	intron_variant	MODIFIER	c.93+990G>A c.93+990G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978087
chr4:87978268	T T	A A	39	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0037 others(36): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0106 a0001c0001t0005g0018 a0001c0002t0002g0003 a0001c0002t0002g0102 a0001c0002t0003g0003 a0001c0002t0003g0010 a0001c0002t0003g0011 a0001c0002t0003g0017 a0001c0002t0003g0031 a0001c0002t0003g0084 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0098 a0001c0002t0003g0099 a0001c0002t0003g0100 a0001c0002t0003g0101 a0001c0002t0003g0103 a0001c0002t0003g0105 a0001c0005t0001g0026 a0001c0005t0001g0081 a0001c0005t0001g0086 a0001c0008t0001g0087 a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0005c0010t0003g0104 a0007c0014t0001g0014 a0008c0015t0001g0037	125	HG00323.hp1 HG00438.hp2 HG00609.hp1 others(122): Show HG00323.hp1 HG00438.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG01167.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01952.hp1 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp1 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp1 HG03927.hp2 HG04184.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18941.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18972.hp2 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18991.hp2 NA18997.hp1 NA18999.hp2 NA19000.hp1 NA19009.hp1 NA19011.hp2 NA19030.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19081.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA20129.hp2 NA20805.hp2 NA20905.hp1	intron_variant	MODIFIER	c.93+1171T>A c.93+1171T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978268
chr4:87978282	A A	T T	31	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0037 others(28): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0106 a0001c0001t0005g0018 a0001c0002t0002g0003 a0001c0002t0002g0102 a0001c0002t0003g0003 a0001c0002t0003g0010 a0001c0002t0003g0011 a0001c0002t0003g0017 a0001c0002t0003g0031 a0001c0002t0003g0084 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0098 a0001c0002t0003g0099 a0001c0002t0003g0100 a0001c0002t0003g0101 a0001c0002t0003g0103 a0001c0002t0003g0105 a0002c0003t0004g0090 a0005c0010t0003g0104 a0007c0014t0001g0014 a0008c0015t0001g0037	107	HG00323.hp1 HG00438.hp2 HG00609.hp1 others(104): Show HG00323.hp1 HG00438.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG01167.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01891.hp1 HG01928.hp1 HG01952.hp1 HG01978.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03579.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp1 HG03927.hp2 HG04184.hp2 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18972.hp2 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18991.hp2 NA18997.hp1 NA18999.hp2 NA19000.hp1 NA19009.hp1 NA19011.hp2 NA19030.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19081.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA20129.hp2 NA20805.hp2 NA20905.hp1	intron_variant	MODIFIER	c.93+1185A>T c.93+1185A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978282
chr4:87978369	C C	T T	1	a0003c0004t0001g0079 a0003c0004t0001g0079	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.93+1272C>T c.93+1272C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978369
chr4:87978379	T T	C C	1	a0002c0003t0004g0012 a0002c0003t0004g0012	5	HG01981.hp2 HG02486.hp1 HG02723.hp2 others(2): Show HG01981.hp2 HG02486.hp1 HG02723.hp2 HG03486.hp2 HG03579.hp1	intron_variant	MODIFIER	c.93+1282T>C c.93+1282T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978379
chr4:87978381	C C	G G	40	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0037 others(37): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0106 a0001c0001t0005g0018 a0001c0002t0002g0003 a0001c0002t0002g0102 a0001c0002t0003g0003 a0001c0002t0003g0010 a0001c0002t0003g0011 a0001c0002t0003g0017 a0001c0002t0003g0031 a0001c0002t0003g0084 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0098 a0001c0002t0003g0099 a0001c0002t0003g0100 a0001c0002t0003g0101 a0001c0002t0003g0103 a0001c0002t0003g0105 a0001c0005t0001g0026 a0001c0005t0001g0081 a0001c0008t0001g0087 a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0005c0010t0003g0104 a0007c0014t0001g0014 a0008c0015t0001g0037 a0009c0013t0011g0056	126	HG00323.hp1 HG00438.hp2 HG00609.hp1 others(123): Show HG00323.hp1 HG00438.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG01167.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01952.hp1 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03486.hp2 HG03516.hp1 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp1 HG03927.hp2 HG04184.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18972.hp2 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18991.hp2 NA18997.hp1 NA18999.hp2 NA19000.hp1 NA19009.hp1 NA19011.hp2 NA19030.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19081.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA20129.hp2 NA20805.hp2 NA20905.hp1	intron_variant	MODIFIER	c.93+1284C>G c.93+1284C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978381
chr4:87978388	C C	CT CT	27	a0001c0001t0001g0009 a0001c0001t0001g0024 a0001c0001t0001g0027 others(24): Show a0001c0001t0001g0009 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0055 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0082 a0001c0001t0001g0092 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0102 a0001c0002t0003g0003 a0001c0002t0003g0010 a0001c0002t0003g0016 a0001c0002t0003g0066 a0001c0002t0003g0084 a0001c0002t0003g0095 a0001c0002t0003g0096 a0001c0002t0003g0100 a0001c0002t0003g0101 a0001c0002t0003g0103 a0001c0002t0003g0105 a0005c0010t0003g0104 a0008c0015t0001g0037	99	HG00323.hp1 HG00423.hp2 HG00438.hp1 others(96): Show HG00323.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00609.hp1 HG00621.hp1 HG00735.hp1 HG01074.hp1 HG01109.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp1 HG01361.hp1 HG01516.hp1 HG01928.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02293.hp1 HG02647.hp2 HG02698.hp2 HG02723.hp1 HG03017.hp1 HG03098.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03927.hp2 HG04184.hp1 HG04199.hp2 NA18612.hp1 NA18747.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp2 NA18952.hp1 NA18954.hp1 NA18959.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18973.hp1 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18991.hp2 NA18993.hp1 NA18997.hp2 NA19000.hp1 NA19000.hp2 NA19006.hp1 NA19006.hp2 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19056.hp2 NA19058.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19081.hp2 NA19083.hp2 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA20805.hp2 NA20905.hp1	intron_variant	MODIFIER	c.93+1316dupT c.93+1316dupT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87978388
chr4:87978388	C C	CTT CTT	8	a0001c0001t0001g0071 a0001c0001t0001g0106 a0001c0002t0002g0069 others(5): Show a0001c0001t0001g0071 a0001c0001t0001g0106 a0001c0002t0002g0069 a0001c0002t0003g0011 a0001c0002t0003g0031 a0001c0002t0003g0035 a0001c0002t0003g0070 a0001c0002t0003g0097	15	HG00621.hp2 HG00642.hp1 HG01261.hp2 others(12): Show HG00621.hp2 HG00642.hp1 HG01261.hp2 HG02055.hp2 HG02080.hp2 HG03516.hp2 HG03942.hp1 HG04184.hp2 NA18949.hp1 NA18972.hp2 NA18997.hp1 NA18999.hp2 NA19030.hp2 NA19063.hp2 NA19066.hp2	intron_variant	MODIFIER	c.93+1315_93+1316dup others(2): Show c.93+1315_93+1316dupTT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87978388
chr4:87978388	CT CT	C C	21	a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0032 others(18): Show a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0032 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0059 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0005g0018 a0001c0002t0002g0058 a0001c0002t0003g0017 a0001c0002t0003g0098 a0001c0006t0001g0043 a0002c0003t0004g0090 a0003c0004t0001g0020 a0003c0004t0001g0057 a0003c0004t0008g0020 a0009c0013t0011g0056	53	HG00639.hp1 HG00733.hp2 HG01123.hp2 others(50): Show HG00639.hp1 HG00733.hp2 HG01123.hp2 HG01167.hp1 HG01169.hp2 HG01891.hp1 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp1 HG03579.hp2 HG03688.hp2 HG03927.hp1 NA18522.hp2 NA18939.hp2 NA18956.hp2 NA18959.hp1 NA18960.hp1 NA18971.hp2 NA18993.hp2 NA19003.hp1 NA19043.hp2 NA19062.hp1 NA19074.hp1 NA19081.hp1 NA19086.hp1 NA19087.hp2 NA20129.hp2 NA20752.hp1	intron_variant	MODIFIER	c.93+1316delT c.93+1316delT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87978388
chr4:87978388	CTT CTT	C C	5	a0001c0005t0001g0026 a0001c0005t0001g0081 a0001c0006t0001g0042 others(2): Show a0001c0005t0001g0026 a0001c0005t0001g0081 a0001c0006t0001g0042 a0002c0003t0004g0012 a0002c0003t0004g0089	11	HG01884.hp1 HG01884.hp2 HG01981.hp2 others(8): Show HG01884.hp1 HG01884.hp2 HG01981.hp2 HG02486.hp1 HG02647.hp1 HG02723.hp2 HG02970.hp2 HG03195.hp2 HG03486.hp2 HG03579.hp1 NA18522.hp1	intron_variant	MODIFIER	c.93+1315_93+1316del others(2): Show c.93+1315_93+1316delTT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87978388
chr4:87978388	CTTT CTTT	C C	3	a0001c0008t0001g0087 a0002c0003t0004g0013 a0002c0003t0004g0088 a0001c0008t0001g0087 a0002c0003t0004g0013 a0002c0003t0004g0088	7	HG02145.hp1 HG02280.hp1 HG02615.hp1 others(4): Show HG02145.hp1 HG02280.hp1 HG02615.hp1 HG03130.hp2 HG03209.hp1 HG03516.hp1 HG06807.hp1	intron_variant	MODIFIER	c.93+1314_93+1316del others(3): Show c.93+1314_93+1316delTTT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87978388
chr4:87978422	G G	T T	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	HG01346.hp2 HG01346.hp2	intron_variant	MODIFIER	c.93+1325G>T c.93+1325G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978422
chr4:87978423	T T	C C	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	HG01346.hp2 HG01346.hp2	intron_variant	MODIFIER	c.93+1326T>C c.93+1326T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978423
chr4:87978423	T T	G G	2	a0001c0005t0001g0026 a0001c0005t0001g0081 a0001c0005t0001g0026 a0001c0005t0001g0081	4	HG01884.hp1 HG02970.hp2 HG03195.hp2 others(1): Show HG01884.hp1 HG02970.hp2 HG03195.hp2 NA18522.hp1	intron_variant	MODIFIER	c.93+1326T>G c.93+1326T>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978423
chr4:87978444	G G	A A	1	a0001c0005t0001g0046 a0001c0005t0001g0046	1	HG02896.hp2 HG02896.hp2	intron_variant	MODIFIER	c.93+1347G>A c.93+1347G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978444
chr4:87978452	G G	A A	1	a0001c0008t0001g0107 a0001c0008t0001g0107	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.93+1355G>A c.93+1355G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978452
chr4:87978467	C C	T T	2	a0001c0001t0001g0085 a0001c0001t0001g0094 a0001c0001t0001g0085 a0001c0001t0001g0094	2	HG01243.hp1 HG02965.hp1 HG01243.hp1 HG02965.hp1	intron_variant	MODIFIER	c.93+1370C>T c.93+1370C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978467
chr4:87978489	A A	G G	24	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0080 others(21): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0005g0018 a0001c0001t0007g0053 a0001c0005t0001g0026 a0001c0005t0001g0030 a0001c0005t0001g0046 a0001c0005t0001g0081 a0001c0005t0001g0086 a0001c0008t0001g0087 a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0003c0004t0001g0057 a0003c0004t0001g0078 a0003c0004t0001g0079 a0007c0014t0001g0014 a0009c0013t0011g0056	62	HG00639.hp1 HG00733.hp2 HG00735.hp2 others(59): Show HG00639.hp1 HG00733.hp2 HG00735.hp2 HG01167.hp1 HG01169.hp2 HG01192.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01981.hp2 HG02109.hp2 HG02145.hp1 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03579.hp1 HG03579.hp2 HG03927.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA20129.hp2	intron_variant	MODIFIER	c.93+1392A>G c.93+1392A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978489
chr4:87978575	G G	A A	10	a0001c0001t0001g0019 a0001c0001t0001g0047 a0001c0005t0001g0030 others(7): Show a0001c0001t0001g0019 a0001c0001t0001g0047 a0001c0005t0001g0030 a0001c0005t0001g0046 a0003c0004t0001g0020 a0003c0004t0001g0036 a0003c0004t0001g0057 a0003c0004t0001g0078 a0003c0004t0001g0079 a0003c0004t0008g0020	15	HG01069.hp1 HG02145.hp2 HG02559.hp1 others(12): Show HG01069.hp1 HG02145.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02717.hp2 HG02896.hp2 HG03098.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA20129.hp1	intron_variant	MODIFIER	c.94-1471G>A c.94-1471G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978575
chr4:87978604	C C	A A	2	a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0048 a0001c0001t0001g0049	2	NA18972.hp1 NA19091.hp2 NA18972.hp1 NA19091.hp2	intron_variant	MODIFIER	c.94-1442C>A c.94-1442C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978604
chr4:87978671	T T	C C	1	a0001c0002t0003g0100 a0001c0002t0003g0100	1	HG02083.hp1 HG02083.hp1	intron_variant	MODIFIER	c.94-1375T>C c.94-1375T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978671
chr4:87978672	G G	A A	1	a0001c0002t0003g0100 a0001c0002t0003g0100	1	HG02083.hp1 HG02083.hp1	intron_variant	MODIFIER	c.94-1374G>A c.94-1374G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978672
chr4:87978768	C C	T T	16	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 others(13): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0065 a0001c0001t0001g0068 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0005g0018 a0001c0002t0002g0064 a0002c0003t0004g0012 a0007c0014t0001g0014	71	HG00280.hp1 HG00280.hp2 HG00639.hp1 others(68): Show HG00280.hp1 HG00280.hp2 HG00639.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp2 HG01361.hp2 HG01891.hp1 HG01978.hp1 HG01981.hp2 HG02109.hp2 HG02148.hp1 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp2 NA18973.hp1 NA18988.hp1 NA18992.hp1 NA18999.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp2	intron_variant	MODIFIER	c.94-1278C>T c.94-1278C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978768
chr4:87978932	T T	C C	1	a0001c0002t0003g0101 a0001c0002t0003g0101	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.94-1114T>C c.94-1114T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978932
chr4:87978946	T T	C C	1	a0001c0002t0003g0101 a0001c0002t0003g0101	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.94-1100T>C c.94-1100T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978946
chr4:87978947	C C	G G	1	a0001c0002t0003g0101 a0001c0002t0003g0101	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.94-1099C>G c.94-1099C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978947
chr4:87978949	A A	G G	1	a0001c0002t0003g0101 a0001c0002t0003g0101	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.94-1097A>G c.94-1097A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978949
chr4:87978950	C C	G G	1	a0001c0002t0003g0101 a0001c0002t0003g0101	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.94-1096C>G c.94-1096C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978950
chr4:87978952	C C	G G	1	a0001c0002t0003g0101 a0001c0002t0003g0101	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.94-1094C>G c.94-1094C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978952
chr4:87978953	C C	T T	1	a0001c0002t0003g0101 a0001c0002t0003g0101	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.94-1093C>T c.94-1093C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978953
chr4:87978956	T T	G G	1	a0001c0002t0003g0101 a0001c0002t0003g0101	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.94-1090T>G c.94-1090T>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978956
chr4:87978993	C C	T T	2	a0001c0001t0001g0039 a0001c0001t0001g0106 a0001c0001t0001g0039 a0001c0001t0001g0106	3	HG00642.hp1 HG03704.hp2 HG03710.hp1 HG00642.hp1 HG03704.hp2 HG03710.hp1	intron_variant	MODIFIER	c.94-1053C>T c.94-1053C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87978993
chr4:87979025	C C	G G	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.94-1021C>G c.94-1021C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979025
chr4:87979161	C C	CT CT	5	a0001c0001t0001g0034 a0001c0001t0001g0045 a0001c0001t0001g0049 others(2): Show a0001c0001t0001g0034 a0001c0001t0001g0045 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0055	6	HG04199.hp1 NA18943.hp2 NA18972.hp1 others(3): Show HG04199.hp1 NA18943.hp2 NA18972.hp1 NA19006.hp2 NA19012.hp1 NA19086.hp1	intron_variant	MODIFIER	c.94-864dupT c.94-864dupT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87979161
chr4:87979161	CT CT	C C	8	a0001c0001t0001g0044 a0001c0001t0001g0065 a0001c0001t0001g0091 others(5): Show a0001c0001t0001g0044 a0001c0001t0001g0065 a0001c0001t0001g0091 a0001c0002t0003g0035 a0001c0002t0003g0066 a0001c0002t0003g0095 a0001c0002t0003g0100 a0001c0006t0001g0062	9	HG01167.hp1 HG01243.hp2 HG02055.hp2 others(6): Show HG01167.hp1 HG01243.hp2 HG02055.hp2 HG02083.hp1 HG02647.hp2 HG02738.hp2 HG03654.hp1 NA19003.hp1 NA19030.hp2	intron_variant	MODIFIER	c.94-864delT c.94-864delT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87979161
chr4:87979161	CTT CTT	C C	33	a0001c0001t0001g0028 a0001c0002t0002g0003 a0001c0002t0002g0041 others(30): Show a0001c0001t0001g0028 a0001c0002t0002g0003 a0001c0002t0002g0041 a0001c0002t0003g0003 a0001c0002t0003g0008 a0001c0002t0003g0010 a0001c0002t0003g0011 a0001c0002t0003g0016 a0001c0002t0003g0017 a0001c0002t0003g0023 a0001c0002t0003g0031 a0001c0002t0003g0070 a0001c0002t0003g0077 a0001c0002t0003g0084 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0099 a0001c0002t0003g0105 a0001c0002t0009g0008 a0001c0005t0001g0086 a0001c0006t0001g0043 a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0003c0004t0001g0020 a0003c0004t0001g0036 a0003c0004t0001g0057 a0003c0004t0001g0078 a0003c0004t0001g0079 a0003c0004t0008g0020 a0005c0010t0003g0104	107	HG00099.hp1 HG00423.hp1 HG00609.hp1 others(104): Show HG00099.hp1 HG00423.hp1 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00733.hp1 HG00741.hp1 HG01069.hp1 HG01099.hp1 HG01433.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02074.hp2 HG02080.hp2 HG02132.hp1 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03927.hp2 HG03942.hp1 HG04184.hp2 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18941.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18964.hp1 NA18966.hp2 NA18968.hp2 NA18971.hp2 NA18972.hp2 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18991.hp2 NA18997.hp1 NA18999.hp2 NA19000.hp1 NA19005.hp1 NA19009.hp1 NA19011.hp2 NA19043.hp2 NA19056.hp2 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19081.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA20805.hp2 NA20905.hp1	intron_variant	MODIFIER	c.94-865_94-864delTT c.94-865_94-864delTT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87979161
chr4:87979161	CTTT CTTT	C C	25	a0001c0001t0001g0006 a0001c0001t0001g0019 a0001c0001t0001g0022 others(22): Show a0001c0001t0001g0006 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0027 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0047 a0001c0001t0001g0059 a0001c0001t0001g0075 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0093 a0001c0001t0001g0106 a0001c0001t0010g0006 a0001c0002t0002g0033 a0001c0002t0003g0098 a0001c0002t0003g0103 a0001c0005t0001g0026 a0001c0005t0001g0030 a0001c0005t0001g0046 a0001c0005t0001g0081 a0001c0006t0001g0042 a0008c0015t0001g0037 a0009c0013t0011g0056	56	HG00140.hp1 HG00140.hp2 HG00323.hp1 others(53): Show HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00642.hp1 HG00738.hp1 HG00738.hp2 HG01099.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01891.hp2 HG02004.hp2 HG02055.hp1 HG02071.hp1 HG02145.hp2 HG02572.hp2 HG02647.hp1 HG02818.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02970.hp2 HG03041.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03490.hp2 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03834.hp2 HG04184.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18939.hp2 NA18969.hp1 NA19030.hp1 NA19043.hp1 NA19240.hp1 NA20129.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.94-866_94-864delTT others(1): Show c.94-866_94-864delTTT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87979161
chr4:87979161	CTTTT CTTTT	C C	21	a0001c0001t0001g0094 a0001c0002t0002g0001 a0001c0002t0002g0007 others(18): Show a0001c0001t0001g0094 a0001c0002t0002g0001 a0001c0002t0002g0007 a0001c0002t0002g0021 a0001c0002t0002g0025 a0001c0002t0002g0050 a0001c0002t0002g0058 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0064 a0001c0002t0002g0069 a0001c0002t0002g0072 a0001c0002t0002g0073 a0001c0002t0002g0076 a0001c0002t0002g0102 a0001c0002t0003g0001 a0001c0002t0006g0001 a0001c0008t0001g0087 a0001c0008t0001g0107 a0006c0011t0003g0001 a0011c0009t0002g0001	106	HG00099.hp2 HG00408.hp1 HG00408.hp2 others(103): Show HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00642.hp2 HG01070.hp2 HG01123.hp1 HG01175.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01952.hp2 HG01993.hp2 HG02015.hp1 HG02040.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02129.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02698.hp2 HG02738.hp1 HG02965.hp1 HG03491.hp2 HG03831.hp2 HG04204.hp1 NA18906.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18980.hp2 NA18982.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18992.hp2 NA18993.hp1 NA18997.hp2 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19006.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19076.hp1 NA19076.hp2 NA19081.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19089.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp2	intron_variant	MODIFIER	c.94-867_94-864delTT others(2): Show c.94-867_94-864delTTTT	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87979161
chr4:87979191	G G	A A	1	a0002c0003t0004g0012 a0002c0003t0004g0012	5	HG01981.hp2 HG02486.hp1 HG02723.hp2 others(2): Show HG01981.hp2 HG02486.hp1 HG02723.hp2 HG03486.hp2 HG03579.hp1	intron_variant	MODIFIER	c.94-855G>A c.94-855G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979191
chr4:87979210	G G	A A	80	a0001c0001t0001g0006 a0001c0001t0001g0019 a0001c0001t0001g0022 others(77): Show a0001c0001t0001g0006 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0027 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0047 a0001c0001t0001g0059 a0001c0001t0001g0075 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0106 a0001c0001t0010g0006 a0001c0002t0002g0001 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0021 a0001c0002t0002g0025 a0001c0002t0002g0033 a0001c0002t0002g0041 a0001c0002t0002g0050 a0001c0002t0002g0058 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0063 a0001c0002t0002g0064 a0001c0002t0002g0069 a0001c0002t0002g0072 a0001c0002t0002g0073 a0001c0002t0002g0076 a0001c0002t0002g0102 a0001c0002t0003g0001 a0001c0002t0003g0003 a0001c0002t0003g0008 a0001c0002t0003g0010 a0001c0002t0003g0011 a0001c0002t0003g0016 a0001c0002t0003g0017 a0001c0002t0003g0023 a0001c0002t0003g0031 a0001c0002t0003g0035 a0001c0002t0003g0066 a0001c0002t0003g0070 a0001c0002t0003g0077 a0001c0002t0003g0084 a0001c0002t0003g0095 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0098 a0001c0002t0003g0099 a0001c0002t0003g0100 a0001c0002t0003g0101 a0001c0002t0003g0103 a0001c0002t0003g0105 a0001c0002t0006g0001 a0001c0002t0009g0008 a0001c0005t0001g0026 a0001c0005t0001g0030 a0001c0005t0001g0046 a0001c0005t0001g0081 a0001c0005t0001g0086 a0001c0006t0001g0042 a0001c0006t0001g0043 a0001c0006t0001g0062 a0001c0008t0001g0087 a0001c0008t0001g0107 a0003c0004t0001g0020 a0003c0004t0001g0036 a0003c0004t0001g0057 a0003c0004t0001g0078 a0003c0004t0001g0079 a0003c0004t0008g0020 a0005c0010t0003g0104 a0006c0011t0003g0001 a0008c0015t0001g0037 a0009c0013t0011g0056 a0011c0009t0002g0001	262	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(259): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp2 HG02738.hp1 HG02738.hp2 HG02818.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp2 HG03491.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18939.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp2 NA18993.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.94-836G>A c.94-836G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979210
chr4:87979345	T T	A A	1	a0001c0006t0001g0042 a0001c0006t0001g0042	1	HG02647.hp1 HG02647.hp1	intron_variant	MODIFIER	c.94-701T>A c.94-701T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979345
chr4:87979395	G G	A A	2	a0001c0002t0002g0060 a0001c0002t0002g0063 a0001c0002t0002g0060 a0001c0002t0002g0063	2	HG01123.hp1 HG02109.hp1 HG01123.hp1 HG02109.hp1	intron_variant	MODIFIER	c.94-651G>A c.94-651G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979395
chr4:87979416	G G	A A	1	a0002c0003t0004g0012 a0002c0003t0004g0012	5	HG01981.hp2 HG02486.hp1 HG02723.hp2 others(2): Show HG01981.hp2 HG02486.hp1 HG02723.hp2 HG03486.hp2 HG03579.hp1	intron_variant	MODIFIER	c.94-630G>A c.94-630G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979416
chr4:87979608	G G	T T	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.94-438G>T c.94-438G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979608
chr4:87979627	G G	A A	1	a0001c0002t0003g0023 a0001c0002t0003g0023	3	HG02922.hp2 HG02965.hp2 HG03540.hp1 HG02922.hp2 HG02965.hp2 HG03540.hp1	intron_variant	MODIFIER	c.94-419G>A c.94-419G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979627
chr4:87979904	C C	CA CA	44	a0001c0002t0002g0001 a0001c0002t0002g0003 a0001c0002t0002g0007 others(41): Show a0001c0002t0002g0001 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0025 a0001c0002t0002g0033 a0001c0002t0002g0041 a0001c0002t0002g0050 a0001c0002t0002g0058 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0063 a0001c0002t0002g0064 a0001c0002t0002g0069 a0001c0002t0002g0072 a0001c0002t0002g0073 a0001c0002t0002g0076 a0001c0002t0002g0102 a0001c0002t0003g0001 a0001c0002t0003g0003 a0001c0002t0003g0008 a0001c0002t0003g0010 a0001c0002t0003g0011 a0001c0002t0003g0016 a0001c0002t0003g0017 a0001c0002t0003g0023 a0001c0002t0003g0031 a0001c0002t0003g0035 a0001c0002t0003g0066 a0001c0002t0003g0070 a0001c0002t0003g0077 a0001c0002t0003g0084 a0001c0002t0003g0095 a0001c0002t0003g0096 a0001c0002t0003g0097 a0001c0002t0003g0098 a0001c0002t0003g0099 a0001c0002t0003g0100 a0001c0002t0003g0103 a0001c0002t0006g0001 a0001c0002t0009g0008 a0002c0003t0004g0088 a0005c0010t0003g0104 a0006c0011t0003g0001 a0011c0009t0002g0001	192	HG00099.hp1 HG00099.hp2 HG00408.hp1 others(189): Show HG00099.hp1 HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01099.hp1 HG01123.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02647.hp2 HG02698.hp2 HG02738.hp1 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03041.hp1 HG03209.hp1 HG03491.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04184.hp2 HG04204.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp2 NA18979.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp2 NA18993.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.94-129dupA c.94-129dupA	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6	INFO_REALIGN_3_PRIME	chr4	87979904
chr4:87979944	G G	A A	1	a0001c0002t0002g0061 a0001c0002t0002g0061	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.94-102G>A c.94-102G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	3/6		chr4	87979944
chr4:87980520	C C	T T	2	a0001c0005t0001g0026 a0001c0005t0001g0081 a0001c0005t0001g0026 a0001c0005t0001g0081	4	HG01884.hp1 HG02970.hp2 HG03195.hp2 others(1): Show HG01884.hp1 HG02970.hp2 HG03195.hp2 NA18522.hp1	intron_variant	MODIFIER	c.216+86C>T c.216+86C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	5/6		chr4	87980520
chr4:87980732	A A	G G	22	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 others(19): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0005g0018 a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0007c0014t0001g0014	82	HG00280.hp1 HG00280.hp2 HG00639.hp1 others(79): Show HG00280.hp1 HG00280.hp2 HG00639.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp2 HG01361.hp2 HG01496.hp2 HG01884.hp2 HG01891.hp1 HG01978.hp1 HG01981.hp2 HG02109.hp2 HG02145.hp1 HG02148.hp1 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp1 NA18522.hp2 NA18943.hp2 NA18973.hp1 NA18992.hp1 NA18999.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp2	intron_variant	MODIFIER	c.216+298A>G c.216+298A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	5/6		chr4	87980732
chr4:87981050	A A	G G	22	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 others(19): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0005g0018 a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0007c0014t0001g0014	82	HG00280.hp1 HG00280.hp2 HG00639.hp1 others(79): Show HG00280.hp1 HG00280.hp2 HG00639.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp2 HG01361.hp2 HG01496.hp2 HG01884.hp2 HG01891.hp1 HG01978.hp1 HG01981.hp2 HG02109.hp2 HG02145.hp1 HG02148.hp1 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp1 NA18522.hp2 NA18943.hp2 NA18973.hp1 NA18992.hp1 NA18999.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp2	intron_variant	MODIFIER	c.217-425A>G c.217-425A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	5/6		chr4	87981050
chr4:87981253	C C	T T	22	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 others(19): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0005g0018 a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090 a0007c0014t0001g0014	82	HG00280.hp1 HG00280.hp2 HG00639.hp1 others(79): Show HG00280.hp1 HG00280.hp2 HG00639.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp2 HG01361.hp2 HG01496.hp2 HG01884.hp2 HG01891.hp1 HG01978.hp1 HG01981.hp2 HG02109.hp2 HG02145.hp1 HG02148.hp1 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp1 NA18522.hp2 NA18943.hp2 NA18973.hp1 NA18992.hp1 NA18999.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp2	intron_variant	MODIFIER	c.217-222C>T c.217-222C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	5/6		chr4	87981253
chr4:87981391	A A	G G	1	a0001c0008t0001g0107 a0001c0008t0001g0107	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.217-84A>G c.217-84A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	5/6		chr4	87981391
chr4:87981820	C C	A A	2	a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0067 a0001c0001t0001g0071	2	HG03098.hp1 HG03516.hp2 HG03098.hp1 HG03516.hp2	intron_variant	MODIFIER	c.540+22C>A c.540+22C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87981820
chr4:87981855	C C	G G	5	a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 others(2): Show a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0088 a0002c0003t0004g0089 a0002c0003t0004g0090	13	HG01884.hp2 HG01981.hp2 HG02145.hp1 others(10): Show HG01884.hp2 HG01981.hp2 HG02145.hp1 HG02280.hp1 HG02486.hp1 HG02723.hp2 HG02809.hp1 HG03130.hp2 HG03209.hp1 HG03486.hp2 HG03516.hp1 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.540+57C>G c.540+57C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87981855
chr4:87981874	TCATTCAT others(5): Show TCATTCATTCATC	T T	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	HG03098.hp1 HG03098.hp1	intron_variant	MODIFIER	c.540+95_540+106delT others(11): Show c.540+95_540+106delTTCATCCATTCA	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6	INFO_REALIGN_3_PRIME	chr4	87981874
chr4:87981964	C C	A A	1	a0001c0002t0003g0099 a0001c0002t0003g0099	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.540+166C>A c.540+166C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87981964
chr4:87982041	C C	G G	17	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 others(14): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0005g0018 a0007c0014t0001g0014	69	HG00280.hp1 HG00280.hp2 HG00639.hp1 others(66): Show HG00280.hp1 HG00280.hp2 HG00639.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp2 HG01361.hp2 HG01496.hp2 HG01891.hp1 HG01978.hp1 HG02109.hp2 HG02148.hp1 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1 NA18522.hp2 NA18943.hp2 NA18973.hp1 NA18992.hp1 NA18999.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp2	intron_variant	MODIFIER	c.540+243C>G c.540+243C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982041
chr4:87982108	G G	C C	3	a0001c0006t0001g0042 a0001c0006t0001g0043 a0001c0006t0001g0062 a0001c0006t0001g0042 a0001c0006t0001g0043 a0001c0006t0001g0062	3	HG02647.hp1 HG02738.hp2 HG03688.hp2 HG02647.hp1 HG02738.hp2 HG03688.hp2	intron_variant	MODIFIER	c.540+310G>C c.540+310G>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982108
chr4:87982331	C C	T T	1	a0001c0001t0001g0038 a0001c0001t0001g0038	2	HG00323.hp1 HG01192.hp1 HG00323.hp1 HG01192.hp1	intron_variant	MODIFIER	c.541-161C>T c.541-161C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982331
chr4:87982333	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-159T>A c.541-159T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982333
chr4:87982335	G G	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-157G>T c.541-157G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982335
chr4:87982336	T T	G G	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-156T>G c.541-156T>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982336
chr4:87982341	T T	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-151T>C c.541-151T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982341
chr4:87982344	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-148T>A c.541-148T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982344
chr4:87982347	A A	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-145A>T c.541-145A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982347
chr4:87982348	C C	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-144C>A c.541-144C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982348
chr4:87982352	G G	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-140G>T c.541-140G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982352
chr4:87982354	A A	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-138A>T c.541-138A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982354
chr4:87982355	A A	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-137A>C c.541-137A>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982355
chr4:87982359	G G	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-133G>T c.541-133G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982359
chr4:87982361	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-131T>A c.541-131T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982361
chr4:87982363	G G	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-129G>A c.541-129G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982363
chr4:87982366	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-126T>A c.541-126T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982366
chr4:87982367	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-125T>A c.541-125T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982367
chr4:87982375	C C	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-117C>T c.541-117C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982375
chr4:87982379	A A	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-113A>C c.541-113A>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982379
chr4:87982384	G G	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-108G>A c.541-108G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982384
chr4:87982389	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-103T>A c.541-103T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982389
chr4:87982391	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-101T>A c.541-101T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982391
chr4:87982392	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-100T>A c.541-100T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982392
chr4:87982393	T T	G G	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-99T>G c.541-99T>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982393
chr4:87982395	G G	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-97G>C c.541-97G>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982395
chr4:87982396	T T	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-96T>C c.541-96T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982396
chr4:87982400	A A	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-92A>T c.541-92A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982400
chr4:87982403	T T	G G	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-89T>G c.541-89T>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982403
chr4:87982406	C C	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-86C>T c.541-86C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982406
chr4:87982407	C C	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-85C>A c.541-85C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982407
chr4:87982410	A A	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-82A>T c.541-82A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982410
chr4:87982416	A A	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-76A>T c.541-76A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982416
chr4:87982417	G G	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-75G>A c.541-75G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982417
chr4:87982419	G G	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-73G>A c.541-73G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982419
chr4:87982423	G G	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-69G>T c.541-69G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982423
chr4:87982424	G G	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-68G>C c.541-68G>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982424
chr4:87982425	A A	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-67A>T c.541-67A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982425
chr4:87982432	T T	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-60T>C c.541-60T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982432
chr4:87982434	A A	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-58A>T c.541-58A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982434
chr4:87982436	C C	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-56C>A c.541-56C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982436
chr4:87982439	A A	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-53A>T c.541-53A>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982439
chr4:87982440	T T	G G	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-52T>G c.541-52T>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982440
chr4:87982443	C C	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-49C>T c.541-49C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982443
chr4:87982451	A A	G G	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-41A>G c.541-41A>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982451
chr4:87982452	G G	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-40G>T c.541-40G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982452
chr4:87982453	C C	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-39C>A c.541-39C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982453
chr4:87982454	C C	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-38C>A c.541-38C>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982454
chr4:87982456	T T	G G	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-36T>G c.541-36T>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982456
chr4:87982462	T T	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-30T>C c.541-30T>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982462
chr4:87982466	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-26T>A c.541-26T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982466
chr4:87982474	A A	C C	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-18A>C c.541-18A>C	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982474
chr4:87982478	G G	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-14G>A c.541-14G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982478
chr4:87982480	G G	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-12G>A c.541-12G>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982480
chr4:87982481	C C	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-11C>T c.541-11C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982481
chr4:87982482	C C	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-10C>T c.541-10C>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982482
chr4:87982483	G G	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	intron_variant	MODIFIER	c.541-9G>T c.541-9G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982483
chr4:87982484	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	splice_region_variant&intron_variant	LOW	c.541-8T>A c.541-8T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982484
chr4:87982485	G G	T T	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	splice_region_variant&intron_variant	LOW	c.541-7G>T c.541-7G>T	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982485
chr4:87982488	T T	A A	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	splice_region_variant&intron_variant	LOW	c.541-4T>A c.541-4T>A	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982488
chr4:87982489	C C	G G	1	a0005c0010t0003g0104 a0005c0010t0003g0104	1	NA18983.hp2 NA18983.hp2	splice_region_variant&intron_variant	LOW	c.541-3C>G c.541-3C>G	SPP1	ENSG00000118785.15	transcript	ENST00000395080.8	protein_coding	6/6		chr4	87982489

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🧬 JoGo Online Haplotype Explorer SPP1_chr4_87970714_87988411

JoGo Local Haplotype Explorer (on iGV) SPP1_chr4_87970714_87988411

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 11)

CCoding Level Haplotype Info (Total: 15)

TTranscript Level Haplotype Info (Total: 11)

GGenebody Level Haplotype Info (Total: 107)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 15)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 22)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 119)

Haplotype Details by Sample (Haploid Level) (Total: 436)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 24)

CCoding Level Variants (Synonymous Mutations) (Total: 8)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 51)

GGenebody Level Haplotype Variants (Intron) (Total: 143)

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Annotation (Repeats)

Annotation (SNP Array)