Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	101929989
ensemblid	ENSG00000283516.2
hgncid	53927
symbol	LITAFD
name	LITAF domain containing
refseq_nuc	NM_001395433.1
refseq_prot	NP_001382362.1
ensembl_nuc	ENST00000636296.2
ensembl_prot	ENSP00000490685.1
mane_status	MANE Select
chr	chr16
start	8882351
end	8885350
strand	+
ver	v1.2
region	chr16:8882351-8885350
region5000	chr16:8877351-8890350
regionname0	LITAFD_chr16_8882351_8885350
regionname5000	LITAFD_chr16_8877351_8890350

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/1	72	386	78	72	178	14	43	132	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0002	1/0	72	14	13	0	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0003	0/0	72	3	3	0	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0004	0/0	72	1	1	0	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0005	0/0	58	1	0	0	0	0	1	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0006	0/0	72	1	1	0	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/1	219	379	78	67	177	13	43	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
c0002	1/0	219	14	13	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
c0003	0/0	219	3	0	3	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
c0004	0/0	219	3	3	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
c0005	0/0	219	3	0	2	0	1	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
c0006	0/0	219	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
c0007	0/0	219	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
c0008	0/0	230	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
c0009	0/0	219	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	326	384	93	70	162	14	43	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
t0002	0/0	325	17	2	0	15	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
t0003	0/0	326	2	0	2	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
t0004	0/0	326	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
t0005	0/0	326	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
t0006	0/0	326	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	194	55	26	89	8	16	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0002	0/1	113	18	27	43	2	22	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0003	0/0	18	0	2	16	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0004	0/0	14	0	0	14	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0005	0/0	8	0	4	0	2	2	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0006	0/0	7	2	3	2	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0007	0/0	4	0	0	4	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0008	0/0	4	0	4	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0009	0/0	3	3	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0010	0/0	3	0	1	2	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0011	1/0	2	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0012	0/0	2	0	0	0	1	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0013	0/0	2	0	2	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0014	0/0	2	2	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0015	0/0	2	2	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0016	0/0	2	1	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0017	0/0	2	2	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0018	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0019	0/0	1	0	1	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0020	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0021	0/0	1	0	1	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0022	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0023	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0024	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0025	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0026	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0027	0/0	1	0	0	0	1	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0028	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0029	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0030	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0031	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0032	0/0	1	0	1	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0033	0/0	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0034	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0035	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0036	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0037	0/0	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0038	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0039	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0040	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
g0041	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/1	219	379	78	67	177	13	43	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0003	0/0	219	3	0	3	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0005	0/0	219	3	0	2	0	1	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0006	0/0	219	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0002c0002	1/0	219	14	13	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0003c0004	0/0	219	3	3	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0004c0009	0/0	219	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0005c0008	0/0	230	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0006c0007	0/0	219	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	544	357	75	65	161	13	42	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0001t0002	0/0	543	17	2	0	15	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0001t0003	0/0	544	2	0	2	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0001t0004	0/0	544	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0001t0005	0/0	544	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0001t0006	0/0	544	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0003t0001	0/0	544	3	0	3	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0005t0001	0/0	544	3	0	2	0	1	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0001c0006t0001	0/0	544	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0002c0002t0001	1/0	544	14	13	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0003c0004t0001	0/0	544	3	3	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0004c0009t0001	0/0	544	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0005c0008t0001	0/0	555	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350
a0006c0007t0001	0/0	544	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	copy fasta	chr16	8877351	8890350

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	178	43	24	88	7	16	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0002	0/1	104	17	22	42	2	20	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0003	0/0	18	0	2	16	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0005	0/0	8	0	4	0	2	2	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0006	0/0	7	2	3	2	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0007	0/0	4	0	0	4	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0008	0/0	4	0	4	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0009	0/0	3	3	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0010	0/0	3	0	1	2	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0012	0/0	2	0	0	0	1	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0013	0/0	2	0	2	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0014	0/0	2	2	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0015	0/0	2	2	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0016	0/0	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0018	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0019	0/0	1	0	1	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0020	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0021	0/0	1	0	1	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0024	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0025	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0026	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0027	0/0	1	0	0	0	1	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0029	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0030	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0032	0/0	1	0	1	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0033	0/0	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0034	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0037	0/0	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0038	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0039	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0040	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0001g0041	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0002g0004	0/0	14	0	0	14	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0002g0023	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0002g0028	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0002g0035	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0003g0002	0/0	2	0	2	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0004g0001	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0005g0002	0/0	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0001t0006g0002	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0003t0001g0002	0/0	3	0	3	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0005t0001g0001	0/0	3	0	2	0	1	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0001c0006t0001g0001	0/0	1	0	0	1	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0002c0002t0001g0001	0/0	11	11	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0002c0002t0001g0011	1/0	2	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0002c0002t0001g0022	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0003c0004t0001g0002	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0003c0004t0001g0017	0/0	2	2	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0004c0009t0001g0036	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0005c0008t0001g0002	0/0	1	0	0	0	0	1	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
a0006c0007t0001g0016	0/0	1	1	0	0	0	0	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0005	t0001	g0001	EUR	GBR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00140	hp2	a0001	c0001	t0001	g0005	EUR	GBR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00280	hp1	a0001	c0001	t0001	g0002	EUR	FIN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00280	hp2	a0001	c0001	t0001	g0005	EUR	FIN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00408	hp1	a0001	c0001	t0001	g0002	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00423	hp1	a0001	c0001	t0001	g0003	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00438	hp2	a0001	c0001	t0001	g0002	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00597	hp2	a0001	c0001	t0001	g0003	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00609	hp2	a0001	c0001	t0001	g0002	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00639	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00642	hp1	a0001	c0005	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00642	hp2	a0001	c0001	t0001	g0005	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00733	hp1	a0001	c0001	t0001	g0021	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00733	hp2	a0001	c0001	t0001	g0005	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00735	hp1	a0001	c0001	t0001	g0006	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00735	hp2	a0001	c0001	t0001	g0008	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00738	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00741	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01069	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01069	hp2	a0001	c0001	t0001	g0003	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01070	hp1	a0001	c0001	t0001	g0006	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01070	hp2	a0001	c0001	t0003	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01071	hp1	a0001	c0001	t0003	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01071	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01081	hp1	a0001	c0001	t0001	g0019	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01081	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01099	hp2	a0001	c0001	t0001	g0008	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01106	hp1	a0001	c0001	t0001	g0005	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01106	hp2	a0001	c0001	t0001	g0008	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01109	hp1	a0001	c0001	t0001	g0005	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01109	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01167	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01169	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01243	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01243	hp2	a0001	c0001	t0001	g0013	AMR	PUR	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01255	hp2	a0001	c0001	t0001	g0002	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01256	hp2	a0001	c0001	t0001	g0013	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01257	hp1	a0001	c0003	t0001	g0002	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01258	hp2	a0001	c0003	t0001	g0002	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01261	hp2	a0001	c0001	t0001	g0010	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01346	hp1	a0001	c0001	t0001	g0002	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01361	hp1	a0001	c0001	t0001	g0002	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01361	hp2	a0001	c0005	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01433	hp1	a0001	c0003	t0001	g0002	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01884	hp1	a0001	c0001	t0001	g0002	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01891	hp2	a0001	c0001	t0001	g0015	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01934	hp2	a0001	c0001	t0001	g0006	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01943	hp1	a0001	c0001	t0001	g0003	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01943	hp2	a0001	c0001	t0001	g0002	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01978	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01981	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01993	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01993	hp2	a0001	c0001	t0001	g0002	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02004	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02004	hp2	a0001	c0001	t0001	g0008	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02027	hp1	a0001	c0001	t0001	g0002	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02027	hp2	a0001	c0001	t0001	g0002	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02040	hp1	a0001	c0001	t0001	g0003	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02056	hp2	a0001	c0001	t0001	g0002	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02071	hp1	a0001	c0001	t0001	g0002	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02080	hp2	a0001	c0001	t0001	g0002	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02129	hp2	a0001	c0001	t0001	g0002	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02132	hp1	a0001	c0001	t0001	g0029	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02132	hp2	a0001	c0001	t0002	g0004	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02135	hp1	a0001	c0001	t0006	g0002	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02145	hp1	a0001	c0001	t0001	g0006	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02145	hp2	a0001	c0001	t0001	g0031	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02148	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02155	hp2	a0001	c0001	t0001	g0025	EAS	CDX	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02165	hp1	a0001	c0001	t0002	g0023	EAS	CDX	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02165	hp2	a0001	c0001	t0001	g0020	EAS	CDX	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02257	hp1	a0001	c0001	t0001	g0002	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02280	hp1	a0001	c0001	t0001	g0009	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02280	hp2	a0002	c0002	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02293	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02293	hp2	a0001	c0001	t0001	g0032	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02451	hp1	a0001	c0001	t0001	g0002	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02602	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02602	hp2	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02615	hp1	a0001	c0001	t0001	g0038	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02630	hp1	a0001	c0001	t0001	g0002	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02630	hp2	a0001	c0001	t0001	g0009	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02647	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02683	hp2	a0001	c0001	t0001	g0016	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02698	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02717	hp1	a0001	c0001	t0001	g0002	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02735	hp2	a0001	c0001	t0001	g0033	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02738	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02738	hp2	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02809	hp2	a0002	c0002	t0001	g0011	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02886	hp2	a0002	c0002	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02895	hp1	a0002	c0002	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02895	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02922	hp2	a0001	c0001	t0001	g0002	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02965	hp1	a0001	c0001	t0001	g0002	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02965	hp2	a0003	c0004	t0001	g0017	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02970	hp1	a0001	c0001	t0002	g0035	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02976	hp1	a0001	c0001	t0001	g0039	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03041	hp1	a0001	c0001	t0002	g0028	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03098	hp2	a0001	c0001	t0001	g0009	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03130	hp1	a0002	c0002	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03130	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03139	hp1	a0001	c0001	t0001	g0024	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03195	hp1	a0001	c0001	t0001	g0002	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03209	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03209	hp2	a0002	c0002	t0001	g0001	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03225	hp2	a0001	c0001	t0001	g0002	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03239	hp1	a0001	c0001	t0001	g0037	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03239	hp2	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03453	hp1	a0001	c0001	t0001	g0014	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03453	hp2	a0001	c0001	t0001	g0002	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03486	hp1	a0003	c0004	t0001	g0002	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03486	hp2	a0002	c0002	t0001	g0001	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03491	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03516	hp2	a0002	c0002	t0001	g0001	AFR	ESN	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03540	hp1	a0001	c0001	t0004	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03540	hp2	a0002	c0002	t0001	g0001	AFR	GWD	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03579	hp1	a0002	c0002	t0001	g0022	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03579	hp2	a0001	c0001	t0001	g0002	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03654	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03654	hp2	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03669	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03669	hp2	a0001	c0001	t0005	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03688	hp1	a0001	c0001	t0001	g0002	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03704	hp2	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03710	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03710	hp2	a0001	c0001	t0001	g0005	SAS	PJL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03831	hp1	a0001	c0001	t0001	g0002	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03834	hp2	a0001	c0001	t0001	g0005	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03927	hp1	a0001	c0001	t0001	g0002	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03942	hp1	a0001	c0001	t0001	g0002	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03942	hp2	a0001	c0001	t0001	g0012	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04115	hp1	a0001	c0001	t0001	g0002	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04115	hp2	a0001	c0001	t0001	g0002	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04184	hp2	a0001	c0001	t0001	g0002	SAS	BEB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04228	hp1	a0005	c0008	t0001	g0002	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18522	hp1	a0001	c0001	t0001	g0002	AFR	YRI	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18612	hp2	a0001	c0001	t0001	g0034	EAS	CHB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18747	hp1	a0001	c0001	t0001	g0003	EAS	CHB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18747	hp2	a0001	c0001	t0001	g0002	EAS	CHB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18906	hp1	a0001	c0001	t0001	g0015	AFR	YRI	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18906	hp2	a0002	c0002	t0001	g0001	AFR	YRI	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18941	hp1	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18941	hp2	a0001	c0001	t0001	g0010	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18943	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18945	hp2	a0001	c0001	t0001	g0007	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18946	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18946	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18947	hp2	a0001	c0001	t0001	g0007	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18948	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18952	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18960	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18961	hp1	a0001	c0001	t0001	g0006	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18963	hp1	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18965	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18966	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18967	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18967	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18970	hp1	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18970	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18971	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18973	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18975	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18977	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18977	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18978	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18978	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18979	hp2	a0001	c0001	t0001	g0007	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18980	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18981	hp1	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18983	hp1	a0001	c0001	t0001	g0007	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18983	hp2	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18985	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18987	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18989	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18990	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18991	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18994	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18994	hp2	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18995	hp1	a0001	c0001	t0001	g0040	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18995	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18999	hp1	a0001	c0001	t0001	g0006	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA18999	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19000	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19002	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19004	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19005	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19006	hp2	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19010	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19011	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19012	hp1	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19012	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19030	hp1	a0001	c0001	t0001	g0014	AFR	LWK	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19030	hp2	a0003	c0004	t0001	g0017	AFR	LWK	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19043	hp1	a0004	c0009	t0001	g0036	AFR	LWK	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19043	hp2	a0002	c0002	t0001	g0001	AFR	LWK	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19056	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19057	hp2	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19059	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19059	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19060	hp2	a0001	c0001	t0001	g0010	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19062	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19063	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19064	hp1	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19064	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19065	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19066	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19070	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19072	hp1	a0001	c0006	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19072	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19077	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19079	hp2	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19080	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19081	hp2	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19082	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19082	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19085	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19085	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19087	hp1	a0001	c0001	t0002	g0004	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19088	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19089	hp1	a0001	c0001	t0001	g0030	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19091	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19091	hp2	a0001	c0001	t0001	g0018	EAS	JPT	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA19240	hp2	a0001	c0001	t0001	g0002	AFR	YRI	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA20129	hp1	a0002	c0002	t0001	g0001	AFR	ASW	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA20129	hp2	a0001	c0001	t0001	g0026	AFR	ASW	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA20805	hp1	a0001	c0001	t0001	g0027	EUR	TSI	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA20805	hp2	a0001	c0001	t0001	g0012	EUR	TSI	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01123	hp1	a0001	c0001	t0001	g0002	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02109	hp2	a0001	c0001	t0001	g0002	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02559	hp1	a0001	c0001	t0001	g0002	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03471	hp1	a0001	c0001	t0001	g0002	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA20300	hp1	a0001	c0001	t0001	g0002	AFR	USA	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA20300	hp2	a0001	c0001	t0001	g0006	AFR	USA	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA21309	hp1	a0001	c0001	t0001	g0041	AFR	LWK	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
NA21309	hp2	a0006	c0007	t0001	g0016	AFR	LWK	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0002	REF	REF	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350
homoSapiens_grch38	hp1	a0002	c0002	t0001	g0011	REF	REF	LITAFD_chr16_8877351_8890350	LITAFD	chr16	8877351	8890350

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr16:8882509	G G	C C	1	a0001 a0001	1	HG03540.hp1 HG03540.hp1	splice_region_variant	LOW	c.-112G>C c.-112G>C		LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/4				chr16	8882509
chr16:8884360	C C	T T	1	a0004 a0004	1	NA19043.hp1 NA19043.hp1	missense_variant	MODERATE	c.5C>T c.5C>T	p.Pro2Leu p.Pro2Leu	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/4	275/544	5/219	2/72	chr16	8884360
chr16:8884408	C C	A A	1	a0003 a0003	3	HG02965.hp2 HG03486.hp1 NA19030.hp2 HG02965.hp2 HG03486.hp1 NA19030.hp2	missense_variant	MODERATE	c.53C>A c.53C>A	p.Thr18Lys p.Thr18Lys	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/4	323/544	53/219	18/72	chr16	8884408
chr16:8885189	A A	G G	5	a0001 a0003 a0004 others(2): Show a0001 a0003 a0004 a0005 a0006	392	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(389): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	missense_variant&splice_region_variant	MODERATE	c.113A>G c.113A>G	p.Tyr38Cys p.Tyr38Cys	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	383/544	113/219	38/72	chr16	8885189
chr16:8885231	T T	TGGCATTC others(4): Show TGGCATTCTGCA	1	a0005 a0005	1	HG04228.hp1 HG04228.hp1	frameshift_variant	HIGH	c.155_156insGGCATTCT others(3): Show c.155_156insGGCATTCTGCA	p.Met53fs p.Met53fs	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	426/544	156/219	52/72	chr16	8885231
chr16:8885234	T T	A A	1	a0005 a0005	1	HG04228.hp1 HG04228.hp1	missense_variant	MODERATE	c.158T>A c.158T>A	p.Met53Lys p.Met53Lys	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	428/544	158/219	53/72	chr16	8885234
chr16:8885287	C C	G G	1	a0006 a0006	1	NA21309.hp2 NA21309.hp2	missense_variant	MODERATE	c.211C>G c.211C>G	p.Arg71Gly p.Arg71Gly	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	481/544	211/219	71/72	chr16	8885287

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr16:8884361	G G	A A	1	a0001c0003 a0001c0003	3	HG01257.hp1 HG01258.hp2 HG01433.hp1 HG01257.hp1 HG01258.hp2 HG01433.hp1	synonymous_variant	LOW	c.6G>A c.6G>A	p.Pro2Pro p.Pro2Pro	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/4	276/544	6/219	2/72	chr16	8884361
chr16:8885232	A A	T T	1	a0005c0008 a0005c0008	1	HG04228.hp1 HG04228.hp1	synonymous_variant	LOW	c.156A>T c.156A>T	p.Leu52Leu p.Leu52Leu	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	426/544	156/219	52/72	chr16	8885232
chr16:8885250	G G	A A	1	a0001c0006 a0001c0006	1	NA19072.hp1 NA19072.hp1	synonymous_variant	LOW	c.174G>A c.174G>A	p.Ser58Ser p.Ser58Ser	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	444/544	174/219	58/72	chr16	8885250
chr16:8885289	C C	T T	1	a0001c0005 a0001c0005	3	HG00099.hp1 HG00642.hp1 HG01361.hp2 HG00099.hp1 HG00642.hp1 HG01361.hp2	synonymous_variant	LOW	c.213C>T c.213C>T	p.Arg71Arg p.Arg71Arg	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	483/544	213/219	71/72	chr16	8885289

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr16:8882386	C C	T T	1	a0001c0001t0006 a0001c0001t0006	1	HG02135.hp1 HG02135.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-235C>T c.-235C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/4			chr16	8882386
chr16:8885320	G G	A A	1	a0001c0001t0005 a0001c0001t0005	1	HG03669.hp2 HG03669.hp2	3_prime_UTR_variant	MODIFIER	c.25G>A c.25G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	25		chr16	8885320
chr16:8885335	AC AC	A A	1	a0001c0001t0002 a0001c0001t0002	17	HG02132.hp2 HG02165.hp1 HG02970.hp1 others(14): Show HG02132.hp2 HG02165.hp1 HG02970.hp1 HG03041.hp1 NA18941.hp1 NA18963.hp1 NA18970.hp1 NA18981.hp1 NA18983.hp2 NA18994.hp2 NA19006.hp2 NA19012.hp1 NA19057.hp2 NA19064.hp1 NA19079.hp2 NA19081.hp2 NA19087.hp1	3_prime_UTR_variant	MODIFIER	c.43delC c.43delC	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	43	INFO_REALIGN_3_PRIME	chr16	8885335
chr16:8885341	G G	A A	1	a0001c0001t0003 a0001c0001t0003	2	HG01070.hp2 HG01071.hp1 HG01070.hp2 HG01071.hp1	3_prime_UTR_variant	MODIFIER	c.46G>A c.46G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	4/4	46		chr16	8885341

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr16:8882655	C C	T T	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.-111+145C>T c.-111+145C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882655
chr16:8882697	G G	A A	1	a0001c0001t0001g0005 a0001c0001t0001g0005	8	HG00140.hp2 HG00280.hp2 HG00642.hp2 others(5): Show HG00140.hp2 HG00280.hp2 HG00642.hp2 HG00733.hp2 HG01106.hp1 HG01109.hp1 HG03710.hp2 HG03834.hp2	intron_variant	MODIFIER	c.-111+187G>A c.-111+187G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882697
chr16:8882714	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	NA19091.hp2 NA19091.hp2	intron_variant	MODIFIER	c.-111+204G>A c.-111+204G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882714
chr16:8882716	T T	C C	1	a0001c0001t0001g0019 a0001c0001t0001g0019	1	HG01081.hp1 HG01081.hp1	intron_variant	MODIFIER	c.-111+206T>C c.-111+206T>C	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882716
chr16:8882731	C C	T T	21	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 others(18): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0003g0002 a0001c0001t0005g0002 a0001c0001t0006g0002 a0001c0003t0001g0002 a0003c0004t0001g0002 a0003c0004t0001g0017 a0004c0009t0001g0036 a0005c0008t0001g0002 a0006c0007t0001g0016	158	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(155): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00438.hp2 HG00597.hp2 HG00609.hp2 HG00639.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01884.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp2 HG02135.hp1 HG02148.hp1 HG02257.hp1 HG02293.hp1 HG02451.hp1 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02738.hp1 HG02738.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04228.hp1 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18941.hp2 NA18943.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp2 NA18952.hp2 NA18960.hp2 NA18966.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18975.hp2 NA18977.hp1 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18989.hp1 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18999.hp2 NA19000.hp2 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19010.hp1 NA19011.hp1 NA19012.hp2 NA19030.hp2 NA19043.hp1 NA19056.hp2 NA19060.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19070.hp1 NA19077.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp2 NA19091.hp1 NA19240.hp2 NA20300.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-111+221C>T c.-111+221C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882731
chr16:8882758	C C	T T	15	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0008 others(12): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0003g0002 a0001c0001t0005g0002 a0001c0001t0006g0002 a0001c0003t0001g0002 a0003c0004t0001g0002 a0003c0004t0001g0017 a0005c0008t0001g0002	144	HG00280.hp1 HG00323.hp2 HG00408.hp1 others(141): Show HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00438.hp2 HG00597.hp2 HG00609.hp2 HG00639.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01884.hp1 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp2 HG02135.hp1 HG02148.hp1 HG02257.hp1 HG02293.hp1 HG02451.hp1 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02698.hp1 HG02717.hp1 HG02738.hp1 HG02738.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04228.hp1 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18941.hp2 NA18943.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp2 NA18952.hp2 NA18960.hp2 NA18966.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18975.hp2 NA18977.hp1 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18989.hp1 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18999.hp2 NA19000.hp2 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19010.hp1 NA19011.hp1 NA19012.hp2 NA19030.hp2 NA19056.hp2 NA19060.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19070.hp1 NA19077.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp2 NA19091.hp1 NA19240.hp2 NA20300.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-111+248C>T c.-111+248C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882758
chr16:8882759	G G	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	HG02165.hp2 HG02165.hp2	intron_variant	MODIFIER	c.-111+249G>A c.-111+249G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882759
chr16:8882830	G G	A A	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	HG00733.hp1 HG00733.hp1	intron_variant	MODIFIER	c.-111+320G>A c.-111+320G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882830
chr16:8882833	C C	T T	1	a0001c0001t0001g0003 a0001c0001t0001g0003	18	HG00423.hp1 HG00597.hp2 HG01069.hp2 others(15): Show HG00423.hp1 HG00597.hp2 HG01069.hp2 HG01943.hp1 HG02040.hp1 NA18747.hp1 NA18946.hp2 NA18966.hp1 NA18978.hp2 NA18991.hp2 NA18994.hp1 NA18999.hp2 NA19011.hp1 NA19064.hp2 NA19070.hp1 NA19080.hp2 NA19082.hp2 NA19091.hp1	intron_variant	MODIFIER	c.-111+323C>T c.-111+323C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882833
chr16:8882834	G G	A A	1	a0001c0001t0001g0007 a0001c0001t0001g0007	4	NA18945.hp2 NA18947.hp2 NA18979.hp2 others(1): Show NA18945.hp2 NA18947.hp2 NA18979.hp2 NA18983.hp1	intron_variant	MODIFIER	c.-111+324G>A c.-111+324G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882834
chr16:8882838	A A	C C	3	a0001c0001t0001g0034 a0001c0001t0002g0004 a0001c0001t0002g0035 a0001c0001t0001g0034 a0001c0001t0002g0004 a0001c0001t0002g0035	16	HG02132.hp2 HG02970.hp1 NA18612.hp2 others(13): Show HG02132.hp2 HG02970.hp1 NA18612.hp2 NA18941.hp1 NA18963.hp1 NA18970.hp1 NA18981.hp1 NA18983.hp2 NA18994.hp2 NA19006.hp2 NA19012.hp1 NA19057.hp2 NA19064.hp1 NA19079.hp2 NA19081.hp2 NA19087.hp1	intron_variant	MODIFIER	c.-111+328A>C c.-111+328A>C	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882838
chr16:8882884	A A	G G	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	HG02735.hp2 HG02735.hp2	intron_variant	MODIFIER	c.-110-326A>G c.-110-326A>G	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882884
chr16:8882926	C C	A A	1	a0001c0001t0001g0008 a0001c0001t0001g0008	4	HG00735.hp2 HG01099.hp2 HG01106.hp2 others(1): Show HG00735.hp2 HG01099.hp2 HG01106.hp2 HG02004.hp2	intron_variant	MODIFIER	c.-110-284C>A c.-110-284C>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882926
chr16:8882943	C C	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	4	HG00735.hp2 HG01099.hp2 HG01106.hp2 others(1): Show HG00735.hp2 HG01099.hp2 HG01106.hp2 HG02004.hp2	intron_variant	MODIFIER	c.-110-267C>T c.-110-267C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8882943
chr16:8883038	G G	T T	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	NA18995.hp1 NA18995.hp1	intron_variant	MODIFIER	c.-110-172G>T c.-110-172G>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8883038
chr16:8883070	G G	A A	1	a0002c0002t0001g0022 a0002c0002t0001g0022	1	HG03579.hp1 HG03579.hp1	intron_variant	MODIFIER	c.-110-140G>A c.-110-140G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8883070
chr16:8883112	G G	A A	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	HG03239.hp1 HG03239.hp1	intron_variant	MODIFIER	c.-110-98G>A c.-110-98G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8883112
chr16:8883160	A A	G G	1	a0001c0001t0001g0014 a0001c0001t0001g0014	2	HG03453.hp1 NA19030.hp1 HG03453.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-110-50A>G c.-110-50A>G	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/3		chr16	8883160
chr16:8883320	G G	A A	2	a0001c0001t0002g0004 a0001c0001t0002g0023 a0001c0001t0002g0004 a0001c0001t0002g0023	15	HG02132.hp2 HG02165.hp1 NA18941.hp1 others(12): Show HG02132.hp2 HG02165.hp1 NA18941.hp1 NA18963.hp1 NA18970.hp1 NA18981.hp1 NA18983.hp2 NA18994.hp2 NA19006.hp2 NA19012.hp1 NA19057.hp2 NA19064.hp1 NA19079.hp2 NA19081.hp2 NA19087.hp1	intron_variant	MODIFIER	c.-34+34G>A c.-34+34G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8883320
chr16:8883358	C C	G G	1	a0004c0009t0001g0036 a0004c0009t0001g0036	1	NA19043.hp1 NA19043.hp1	intron_variant	MODIFIER	c.-34+72C>G c.-34+72C>G	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8883358
chr16:8883373	A A	G G	51	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(48): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0002g0004 a0001c0001t0002g0023 a0001c0001t0002g0028 a0001c0001t0002g0035 a0001c0001t0003g0002 a0001c0001t0004g0001 a0001c0001t0005g0002 a0001c0001t0006g0002 a0001c0003t0001g0002 a0001c0005t0001g0001 a0001c0006t0001g0001 a0002c0002t0001g0001 a0002c0002t0001g0022 a0003c0004t0001g0002 a0003c0004t0001g0017 a0004c0009t0001g0036 a0005c0008t0001g0002 a0006c0007t0001g0016	404	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(401): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-34+87A>G c.-34+87A>G	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8883373
chr16:8883582	C C	T T	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG02293.hp2 HG02293.hp2	intron_variant	MODIFIER	c.-34+296C>T c.-34+296C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8883582
chr16:8883636	G G	A A	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.-34+350G>A c.-34+350G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8883636
chr16:8883747	AGTGAAGA others(42): Show AGTGAAGATGACGTCACCATTGAAAAGCACCCTTTAGGTCAGGTGCGGTG	A A	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	HG02155.hp2 HG02155.hp2	intron_variant	MODIFIER	c.-34+463_-34+511del others(49): Show c.-34+463_-34+511delTGAAGATGACGTCACCATTGAAAAGCACCC TTTAGGTCAGGTGCGGTGG	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3	INFO_REALIGN_3_PRIME	chr16	8883747
chr16:8883775	A A	T T	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.-34+489A>T c.-34+489A>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8883775
chr16:8883868	C C	G G	2	a0001c0001t0001g0009 a0001c0001t0001g0031 a0001c0001t0001g0009 a0001c0001t0001g0031	4	HG02145.hp2 HG02280.hp1 HG02630.hp2 others(1): Show HG02145.hp2 HG02280.hp1 HG02630.hp2 HG03098.hp2	intron_variant	MODIFIER	c.-33-455C>G c.-33-455C>G	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8883868
chr16:8884043	C C	T T	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.-33-280C>T c.-33-280C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8884043
chr16:8884142	C C	T T	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	HG02976.hp1 HG02976.hp1	intron_variant	MODIFIER	c.-33-181C>T c.-33-181C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8884142
chr16:8884242	C C	T T	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.-33-81C>T c.-33-81C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8884242
chr16:8884304	C C	T T	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.-33-19C>T c.-33-19C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		chr16	8884304
chr16:8884535	C C	T T	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG02132.hp1 HG02132.hp1	intron_variant	MODIFIER	c.110+70C>T c.110+70C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8884535
chr16:8884544	G G	A A	1	a0004c0009t0001g0036 a0004c0009t0001g0036	1	NA19043.hp1 NA19043.hp1	intron_variant	MODIFIER	c.110+79G>A c.110+79G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8884544
chr16:8884811	G G	A A	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG01891.hp2 NA18906.hp1 HG01891.hp2 NA18906.hp1	intron_variant	MODIFIER	c.110+346G>A c.110+346G>A	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8884811
chr16:8884844	G G	C C	22	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 others(19): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0003g0002 a0001c0001t0005g0002 a0001c0001t0006g0002 a0001c0003t0001g0002 a0003c0004t0001g0002 a0003c0004t0001g0017 a0004c0009t0001g0036 a0005c0008t0001g0002 a0006c0007t0001g0016	164	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(161): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00438.hp2 HG00597.hp2 HG00609.hp2 HG00639.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01884.hp1 HG01891.hp2 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp2 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02257.hp1 HG02293.hp1 HG02451.hp1 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02738.hp1 HG02738.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04228.hp1 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18943.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp2 NA18952.hp2 NA18960.hp2 NA18961.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18975.hp2 NA18977.hp1 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18989.hp1 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19010.hp1 NA19011.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19070.hp1 NA19077.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp2 NA19091.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.111-343G>C c.111-343G>C	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8884844
chr16:8884853	G G	C C	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.111-334G>C c.111-334G>C	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8884853
chr16:8884932	A A	T T	1	a0001c0001t0001g0013 a0001c0001t0001g0013	2	HG01243.hp2 HG01256.hp2 HG01243.hp2 HG01256.hp2	intron_variant	MODIFIER	c.111-255A>T c.111-255A>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8884932
chr16:8885063	A A	G G	4	a0001c0001t0002g0004 a0001c0001t0002g0023 a0001c0001t0002g0028 others(1): Show a0001c0001t0002g0004 a0001c0001t0002g0023 a0001c0001t0002g0028 a0001c0001t0002g0035	17	HG02132.hp2 HG02165.hp1 HG02970.hp1 others(14): Show HG02132.hp2 HG02165.hp1 HG02970.hp1 HG03041.hp1 NA18941.hp1 NA18963.hp1 NA18970.hp1 NA18981.hp1 NA18983.hp2 NA18994.hp2 NA19006.hp2 NA19012.hp1 NA19057.hp2 NA19064.hp1 NA19079.hp2 NA19081.hp2 NA19087.hp1	intron_variant	MODIFIER	c.111-124A>G c.111-124A>G	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8885063
chr16:8885065	T T	C C	1	a0001c0001t0001g0012 a0001c0001t0001g0012	2	HG03942.hp2 NA20805.hp2 HG03942.hp2 NA20805.hp2	intron_variant	MODIFIER	c.111-122T>C c.111-122T>C	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8885065
chr16:8885074	A A	T T	1	a0003c0004t0001g0017 a0003c0004t0001g0017	2	HG02965.hp2 NA19030.hp2 HG02965.hp2 NA19030.hp2	intron_variant	MODIFIER	c.111-113A>T c.111-113A>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8885074
chr16:8885088	C C	T T	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	NA20805.hp1 NA20805.hp1	intron_variant	MODIFIER	c.111-99C>T c.111-99C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	3/3		chr16	8885088

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JoGo Online Haplotype Explorer LITAFD_chr16_8877351_8890350

JoGo Local Haplotype Explorer (on iGV) LITAFD_chr16_8877351_8890350

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 6)

CCoding Level Haplotype Info (Total: 9)

TTranscript Level Haplotype Info (Total: 6)

GGenebody Level Haplotype Info (Total: 41)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 9)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 14)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 52)

Haplotype Details by Sample (Haploid Level) (Total: 406)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 7)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (Exon) (Total: 4)

GGenebody Level Haplotype Variants (Intron) (Total: 40)

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Annotation (Repeats)

Annotation (SNP Array)