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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   APOF_chr12_56355568_56367857  APOF_chr12_56355568_56367857 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 319
ensemblid ENSG00000175336.10
hgncid 615
symbol APOF
name apolipoprotein F
refseq_nuc NM_001638.4
refseq_prot NP_001629.1
ensembl_nuc ENST00000398189.4
ensembl_prot ENSP00000381250.3
mane_status MANE Select
chr chr12
start 56360568
end 56362857
strand -
ver v1.2
region chr12:56360568-56362857
region5000 chr12:56355568-56367857
regionname0 APOF_chr12_56360568_56362857
regionname5000 APOF_chr12_56355568_56367857

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 326 201 28 48 89 10 24 58 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002 0/0 326 59 55 4 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0003 0/0 326 8 0 0 8 0 0 5 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0004 0/0 326 3 3 0 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0005 0/0 326 2 0 0 2 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0006 0/0 326 2 2 0 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0007 0/0 326 1 0 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0008 0/0 326 1 0 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0009 0/0 326 1 0 0 1 0 0 1 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 981 199 27 48 89 10 23 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0002 0/0 981 24 22 2 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0003 0/0 981 22 21 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0004 0/0 981 13 12 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0005 0/0 981 8 0 0 8 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0006 0/0 981 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0007 0/0 981 2 2 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0008 0/0 981 2 0 0 2 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0009 0/0 981 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0010 0/0 981 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0011 0/0 981 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0012 0/0 981 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
c0013 0/0 981 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 1/1 770 196 29 46 89 7 23 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
t0002 0/0 768 54 50 4 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
t0003 0/0 768 15 0 4 9 2 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
t0004 0/0 770 8 8 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
t0005 0/0 770 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
t0006 0/0 768 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
t0007 0/0 770 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
t0008 0/0 770 1 0 0 0 1 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
t0009 0/0 770 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 1/1 178 22 43 83 6 22 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0002 0/0 21 20 1 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0003 0/0 18 16 2 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0004 0/0 9 8 1 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0005 0/0 9 0 3 4 2 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0006 0/0 5 0 0 5 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0007 0/0 4 4 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0008 0/0 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0009 0/0 3 0 0 3 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0010 0/0 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0011 0/0 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0012 0/0 2 1 0 0 1 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0013 0/0 2 0 2 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0014 0/0 2 2 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0015 0/0 2 2 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0016 0/0 2 0 0 2 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0017 0/0 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0018 0/0 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0019 0/0 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0020 0/0 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0021 0/0 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0022 0/0 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0023 0/0 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0024 0/0 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0025 0/0 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0026 0/0 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0027 0/0 1 0 0 0 1 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
g0028 0/0 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/1 981 199 27 48 89 10 23 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0009 0/0 981 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0010 0/0 981 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0002 0/0 981 24 22 2 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0003 0/0 981 22 21 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0004 0/0 981 13 12 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0003c0005 0/0 981 8 0 0 8 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0004c0006 0/0 981 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0005c0008 0/0 981 2 0 0 2 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0006c0007 0/0 981 2 2 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0007c0012 0/0 981 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0008c0011 0/0 981 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0009c0013 0/0 981 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 1/1 1750 182 23 45 83 7 22 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0001t0002 0/0 1748 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0001t0003 0/0 1748 9 0 3 4 2 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0001t0004 0/0 1750 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0001t0005 0/0 1750 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0001t0007 0/0 1750 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0001t0008 0/0 1750 1 0 0 0 1 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0001t0009 0/0 1750 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0009t0001 0/0 1750 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0001c0010t0002 0/0 1748 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0002t0001 0/0 1750 2 2 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0002t0002 0/0 1748 18 16 2 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0002t0004 0/0 1750 4 4 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0003t0001 0/0 1750 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0003t0002 0/0 1748 21 20 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0004t0002 0/0 1748 9 8 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0004t0004 0/0 1750 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0002c0004t0006 0/0 1748 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0003c0005t0001 0/0 1750 5 0 0 5 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0003c0005t0003 0/0 1748 3 0 0 3 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0004c0006t0001 0/0 1750 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0005c0008t0003 0/0 1748 2 0 0 2 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0006c0007t0002 0/0 1748 2 2 0 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0007c0012t0001 0/0 1750 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0008c0011t0003 0/0 1748 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857
a0009c0013t0001 0/0 1750 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF copy fasta chr12 56355568 56367857

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 1/1 178 22 43 83 6 22 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0001g0012 0/0 2 1 0 0 1 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0001g0013 0/0 2 0 2 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0002g0011 0/0 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0003g0005 0/0 9 0 3 4 2 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0004g0019 0/0 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0005g0020 0/0 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0007g0021 0/0 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0008g0027 0/0 1 0 0 0 1 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0001t0009g0028 0/0 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0009t0001g0018 0/0 1 0 0 0 0 1 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0001c0010t0002g0023 0/0 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0002c0002t0001g0015 0/0 2 2 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0002c0002t0002g0003 0/0 18 16 2 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0002c0002t0004g0007 0/0 4 4 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0002c0003t0001g0022 0/0 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0002c0003t0002g0002 0/0 21 20 1 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0002c0004t0002g0004 0/0 9 8 1 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0002c0004t0004g0010 0/0 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0002c0004t0006g0017 0/0 1 1 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0003c0005t0001g0006 0/0 5 0 0 5 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0003c0005t0003g0009 0/0 3 0 0 3 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0004c0006t0001g0008 0/0 3 3 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0005c0008t0003g0016 0/0 2 0 0 2 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0006c0007t0002g0014 0/0 2 2 0 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0007c0012t0001g0025 0/0 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0008c0011t0003g0024 0/0 1 0 1 0 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
a0009c0013t0001g0026 0/0 1 0 0 1 0 0 APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00280 hp1 a0001 c0001 t0001 g0001 EUR FIN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00280 hp2 a0001 c0001 t0001 g0001 EUR FIN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00323 hp1 a0001 c0001 t0001 g0001 EUR FIN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00323 hp2 a0001 c0001 t0008 g0027 EUR FIN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00408 hp1 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00408 hp2 a0003 c0005 t0001 g0006 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00438 hp1 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00438 hp2 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00544 hp1 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00544 hp2 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00558 hp1 a0003 c0005 t0001 g0006 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00558 hp2 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00597 hp1 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00597 hp2 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00621 hp1 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00621 hp2 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00642 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00642 hp2 a0001 c0001 t0003 g0005 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00673 hp1 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00673 hp2 a0001 c0001 t0001 g0001 EAS CHS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00738 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG00738 hp2 a0001 c0001 t0001 g0013 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01071 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01071 hp2 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01081 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01081 hp2 a0001 c0001 t0001 g0013 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01099 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01099 hp2 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01106 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01106 hp2 a0001 c0001 t0003 g0005 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01109 hp1 a0002 c0004 t0002 g0004 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01109 hp2 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01167 hp1 a0002 c0002 t0002 g0003 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01167 hp2 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01168 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01168 hp2 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01169 hp1 a0002 c0002 t0002 g0003 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01169 hp2 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01175 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01175 hp2 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01243 hp1 a0001 c0001 t0001 g0001 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01243 hp2 a0002 c0003 t0002 g0002 AMR PUR APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01257 hp1 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01257 hp2 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01346 hp1 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01346 hp2 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01358 hp1 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01358 hp2 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01361 hp1 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01361 hp2 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01433 hp1 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01433 hp2 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01516 hp1 a0001 c0001 t0001 g0012 EUR IBS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01516 hp2 a0001 c0001 t0003 g0005 EUR IBS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01517 hp1 a0001 c0001 t0001 g0001 EUR IBS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01517 hp2 a0001 c0001 t0003 g0005 EUR IBS APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01884 hp1 a0002 c0002 t0002 g0003 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01884 hp2 a0002 c0002 t0002 g0003 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01891 hp1 a0006 c0007 t0002 g0014 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01891 hp2 a0002 c0004 t0004 g0010 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01928 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01928 hp2 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01943 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01943 hp2 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01975 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01975 hp2 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01978 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01978 hp2 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01981 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01981 hp2 a0007 c0012 t0001 g0025 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02027 hp1 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02027 hp2 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02040 hp1 a0005 c0008 t0003 g0016 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02040 hp2 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02055 hp1 a0002 c0003 t0002 g0002 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02055 hp2 a0002 c0002 t0002 g0003 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02056 hp1 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02056 hp2 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02071 hp1 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02071 hp2 a0003 c0005 t0001 g0006 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02074 hp1 a0001 c0001 t0005 g0020 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02074 hp2 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02083 hp1 a0005 c0008 t0003 g0016 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02083 hp2 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02132 hp1 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02132 hp2 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02145 hp1 a0002 c0004 t0002 g0004 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02145 hp2 a0004 c0006 t0001 g0008 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02148 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02148 hp2 a0001 c0001 t0003 g0005 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02155 hp1 a0001 c0001 t0001 g0001 EAS CDX APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02155 hp2 a0001 c0001 t0001 g0001 EAS CDX APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02257 hp1 a0002 c0004 t0002 g0004 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02257 hp2 a0002 c0003 t0002 g0002 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02258 hp1 a0001 c0001 t0001 g0001 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02258 hp2 a0001 c0001 t0001 g0001 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02273 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02273 hp2 a0008 c0011 t0003 g0024 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02293 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02293 hp2 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02300 hp1 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02300 hp2 a0001 c0001 t0001 g0001 AMR PEL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02451 hp1 a0002 c0003 t0002 g0002 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02451 hp2 a0004 c0006 t0001 g0008 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02523 hp1 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02523 hp2 a0001 c0001 t0001 g0001 EAS KHV APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02572 hp1 a0002 c0002 t0002 g0003 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02572 hp2 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02602 hp1 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02602 hp2 a0001 c0001 t0009 g0028 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02615 hp1 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02615 hp2 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02622 hp1 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02622 hp2 a0002 c0002 t0001 g0015 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02630 hp1 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02630 hp2 a0002 c0002 t0002 g0003 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02647 hp1 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02647 hp2 a0002 c0002 t0001 g0015 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02717 hp1 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02717 hp2 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02723 hp1 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02723 hp2 a0002 c0004 t0004 g0010 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02735 hp1 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02735 hp2 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02809 hp1 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02809 hp2 a0002 c0002 t0002 g0003 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02818 hp1 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02818 hp2 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02895 hp1 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02895 hp2 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02896 hp1 a0002 c0002 t0002 g0003 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02896 hp2 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02897 hp1 a0002 c0002 t0004 g0007 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02897 hp2 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02922 hp1 a0002 c0002 t0002 g0003 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02922 hp2 a0002 c0003 t0002 g0002 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02965 hp1 a0002 c0004 t0002 g0004 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02965 hp2 a0001 c0001 t0002 g0011 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02970 hp1 a0002 c0002 t0002 g0003 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02970 hp2 a0004 c0006 t0001 g0008 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02976 hp1 a0001 c0001 t0001 g0001 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02976 hp2 a0002 c0003 t0002 g0002 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03041 hp1 a0002 c0004 t0002 g0004 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03041 hp2 a0002 c0003 t0002 g0002 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03130 hp1 a0002 c0004 t0002 g0004 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03130 hp2 a0001 c0001 t0001 g0001 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03139 hp1 a0002 c0002 t0002 g0003 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03139 hp2 a0002 c0002 t0002 g0003 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03195 hp1 a0002 c0002 t0002 g0003 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03195 hp2 a0002 c0002 t0002 g0003 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03225 hp1 a0001 c0001 t0002 g0011 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03225 hp2 a0006 c0007 t0002 g0014 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03239 hp1 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03239 hp2 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03453 hp1 a0001 c0010 t0002 g0023 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03453 hp2 a0002 c0003 t0002 g0002 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03486 hp1 a0001 c0001 t0001 g0001 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03486 hp2 a0002 c0004 t0004 g0010 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03490 hp1 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03490 hp2 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03492 hp1 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03492 hp2 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03516 hp1 a0002 c0002 t0002 g0003 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03516 hp2 a0002 c0002 t0004 g0007 AFR ESN APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03540 hp1 a0001 c0001 t0001 g0001 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03540 hp2 a0002 c0002 t0002 g0003 AFR GWD APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03579 hp1 a0002 c0003 t0002 g0002 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03579 hp2 a0002 c0004 t0002 g0004 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03654 hp1 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03654 hp2 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03688 hp1 a0001 c0001 t0001 g0001 SAS STU APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03688 hp2 a0001 c0001 t0001 g0001 SAS STU APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03704 hp1 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03704 hp2 a0001 c0001 t0001 g0001 SAS PJL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03831 hp1 a0001 c0001 t0001 g0001 SAS BEB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03831 hp2 a0001 c0001 t0001 g0001 SAS BEB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03942 hp1 a0001 c0001 t0001 g0001 SAS BEB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03942 hp2 a0001 c0001 t0001 g0001 SAS BEB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG04199 hp1 a0001 c0001 t0001 g0001 SAS STU APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG04199 hp2 a0001 c0001 t0001 g0001 SAS STU APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG04204 hp1 a0001 c0001 t0001 g0001 SAS STU APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG04204 hp2 a0001 c0009 t0001 g0018 SAS STU APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18522 hp1 a0001 c0001 t0002 g0011 AFR YRI APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18522 hp2 a0001 c0001 t0001 g0001 AFR YRI APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18612 hp1 a0001 c0001 t0001 g0001 EAS CHB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18612 hp2 a0001 c0001 t0001 g0001 EAS CHB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18747 hp1 a0001 c0001 t0001 g0001 EAS CHB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18747 hp2 a0001 c0001 t0001 g0001 EAS CHB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18906 hp1 a0002 c0003 t0002 g0002 AFR YRI APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18906 hp2 a0001 c0001 t0001 g0001 AFR YRI APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18939 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18939 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18944 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18944 hp2 a0003 c0005 t0003 g0009 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18945 hp1 a0001 c0001 t0003 g0005 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18945 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18946 hp1 a0001 c0001 t0003 g0005 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18946 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18956 hp1 a0001 c0001 t0003 g0005 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18956 hp2 a0003 c0005 t0003 g0009 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18957 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18957 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18962 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18962 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18969 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18969 hp2 a0003 c0005 t0001 g0006 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18971 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18971 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18972 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18972 hp2 a0001 c0001 t0007 g0021 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18974 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18974 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18980 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18980 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18988 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18988 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18998 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA18998 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19007 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19007 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19010 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19010 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19011 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19011 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19012 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19012 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19030 hp1 a0001 c0001 t0001 g0001 AFR LWK APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19030 hp2 a0002 c0002 t0004 g0007 AFR LWK APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19043 hp1 a0001 c0001 t0001 g0012 AFR LWK APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19043 hp2 a0002 c0004 t0006 g0017 AFR LWK APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19056 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19056 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19057 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19057 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19062 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19062 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19064 hp1 a0001 c0001 t0003 g0005 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19064 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19066 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19066 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19070 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19070 hp2 a0003 c0005 t0001 g0006 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19074 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19074 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19079 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19079 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19081 hp1 a0003 c0005 t0003 g0009 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19081 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19083 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19083 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19087 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19087 hp2 a0009 c0013 t0001 g0026 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19088 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19088 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19090 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19090 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19091 hp1 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19091 hp2 a0001 c0001 t0001 g0001 EAS JPT APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19240 hp1 a0001 c0001 t0001 g0001 AFR YRI APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA19240 hp2 a0002 c0002 t0002 g0003 AFR YRI APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA20129 hp1 a0001 c0001 t0001 g0001 AFR ASW APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA20129 hp2 a0001 c0001 t0001 g0001 AFR ASW APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA20805 hp1 a0001 c0001 t0001 g0001 EUR TSI APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
NA20805 hp2 a0001 c0001 t0001 g0001 EUR TSI APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01123 hp1 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG01123 hp2 a0001 c0001 t0001 g0001 AMR CLM APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02109 hp1 a0002 c0003 t0001 g0022 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02109 hp2 a0001 c0001 t0001 g0001 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02486 hp1 a0002 c0003 t0002 g0002 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02486 hp2 a0002 c0003 t0002 g0002 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02559 hp1 a0002 c0002 t0004 g0007 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG02559 hp2 a0002 c0003 t0002 g0002 AFR ACB APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03471 hp1 a0002 c0004 t0002 g0004 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG03471 hp2 a0002 c0004 t0002 g0004 AFR MSL APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG06807 hp1 a0001 c0001 t0001 g0001 AFR USA APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
HG06807 hp2 a0001 c0001 t0004 g0019 AFR USA APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
homoSapiens_chm13v2 hp1 a0001 c0001 t0001 g0001 REF REF APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857
homoSapiens_grch38 hp1 a0001 c0001 t0001 g0001 REF REF APOF_chr12_56355568_56367857 APOF chr12 56355568 56367857

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr12:56361274 A
A
 G
G
 2 a0002
a0006
a0002
a0006
 61 HG01109.hp1
HG01167.hp1
HG01169.hp1
others(58): Show 
HG01109.hp1
HG01167.hp1
HG01169.hp1
HG01243.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG02055.hp1
HG02055.hp2
HG02109.hp1
HG02145.hp1
HG02257.hp1
HG02257.hp2
HG02451.hp1
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03225.hp2
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp2
HG03579.hp1
HG03579.hp2
NA18906.hp1
NA19030.hp2
NA19043.hp2
NA19240.hp2
 missense_variant MODERATE c.932T>C
c.932T>C
 p.Ile311Thr
p.Ile311Thr
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 1044/1750 932/981 311/326 chr12 56361274
chr12:56361487 G
G
 A
A
 1 a0008
a0008
 1 HG02273.hp2
HG02273.hp2
 missense_variant MODERATE c.719C>T
c.719C>T
 p.Ala240Val
p.Ala240Val
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 831/1750 719/981 240/326 chr12 56361487
chr12:56361673 G
G
 C
C
 2 a0005
a0006
a0005
a0006
 4 HG01891.hp1
HG02040.hp1
HG02083.hp1
others(1): Show 
HG01891.hp1
HG02040.hp1
HG02083.hp1
HG03225.hp2
 missense_variant MODERATE c.533C>G
c.533C>G
 p.Ala178Gly
p.Ala178Gly
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 645/1750 533/981 178/326 chr12 56361673
chr12:56361868 C
C
 T
T
 1 a0003
a0003
 8 HG00408.hp2
HG00558.hp1
HG02071.hp2
others(5): Show 
HG00408.hp2
HG00558.hp1
HG02071.hp2
NA18944.hp2
NA18956.hp2
NA18969.hp2
NA19070.hp2
NA19081.hp1
 missense_variant MODERATE c.338G>A
c.338G>A
 p.Arg113His
p.Arg113His
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 450/1750 338/981 113/326 chr12 56361868
chr12:56361869 G
G
 C
C
 1 a0007
a0007
 1 HG01981.hp2
HG01981.hp2
 missense_variant MODERATE c.337C>G
c.337C>G
 p.Arg113Gly
p.Arg113Gly
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 449/1750 337/981 113/326 chr12 56361869
chr12:56361907 C
C
 A
A
 1 a0009
a0009
 1 NA19087.hp2
NA19087.hp2
 missense_variant MODERATE c.299G>T
c.299G>T
 p.Cys100Phe
p.Cys100Phe
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 411/1750 299/981 100/326 chr12 56361907
chr12:56362109 G
G
 T
T
 1 a0004
a0004
 3 HG02145.hp2
HG02451.hp2
HG02970.hp2
HG02145.hp2
HG02451.hp2
HG02970.hp2
 missense_variant MODERATE c.97C>A
c.97C>A
 p.Pro33Thr
p.Pro33Thr
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 209/1750 97/981 33/326 chr12 56362109

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr12:56361336 T
T
 C
C
 2 a0001c0010
a0002c0003
a0001c0010
a0002c0003
 23 HG01243.hp2
HG02055.hp1
HG02109.hp1
others(20): Show 
HG01243.hp2
HG02055.hp1
HG02109.hp1
HG02257.hp2
HG02451.hp1
HG02486.hp1
HG02486.hp2
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02895.hp2
HG02896.hp2
HG02922.hp2
HG02976.hp2
HG03041.hp2
HG03453.hp1
HG03453.hp2
HG03579.hp1
NA18906.hp1
 synonymous_variant LOW c.870A>G
c.870A>G
 p.Thr290Thr
p.Thr290Thr
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 982/1750 870/981 290/326 chr12 56361336
chr12:56361486 C
C
 G
G
 1 a0001c0009
a0001c0009
 1 HG04204.hp2
HG04204.hp2
 synonymous_variant LOW c.720G>C
c.720G>C
 p.Ala240Ala
p.Ala240Ala
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 832/1750 720/981 240/326 chr12 56361486
chr12:56361516 A
A
 C
C
 1 a0002c0004
a0002c0004
 13 HG01109.hp1
HG01891.hp2
HG02145.hp1
others(10): Show 
HG01109.hp1
HG01891.hp2
HG02145.hp1
HG02257.hp1
HG02723.hp2
HG02965.hp1
HG03041.hp1
HG03130.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp2
HG03579.hp2
NA19043.hp2
 synonymous_variant LOW c.690T>G
c.690T>G
 p.Ala230Ala
p.Ala230Ala
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 802/1750 690/981 230/326 chr12 56361516
chr12:56361705 C
C
 G
G
 2 a0005c0008
a0006c0007
a0005c0008
a0006c0007
 4 HG01891.hp1
HG02040.hp1
HG02083.hp1
others(1): Show 
HG01891.hp1
HG02040.hp1
HG02083.hp1
HG03225.hp2
 synonymous_variant LOW c.501G>C
c.501G>C
 p.Pro167Pro
p.Pro167Pro
 APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 613/1750 501/981 167/326 chr12 56361705

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr12:56360587 TTA
TTA
 T
T
 11 a0001c0001t0002
a0001c0001t0003
a0001c0010t0002
others(8): Show 
a0001c0001t0002
a0001c0001t0003
a0001c0010t0002
a0002c0002t0002
a0002c0003t0002
a0002c0004t0002
a0002c0004t0006
a0003c0005t0003
a0005c0008t0003
a0006c0007t0002
a0008c0011t0003
 70 HG00642.hp2
HG01106.hp2
HG01109.hp1
others(67): Show 
HG00642.hp2
HG01106.hp2
HG01109.hp1
HG01167.hp1
HG01169.hp1
HG01243.hp2
HG01516.hp2
HG01517.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp1
HG02040.hp1
HG02055.hp1
HG02055.hp2
HG02083.hp1
HG02145.hp1
HG02148.hp2
HG02257.hp1
HG02257.hp2
HG02273.hp2
HG02451.hp1
HG02486.hp1
HG02486.hp2
HG02559.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02630.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02809.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03516.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
NA18522.hp1
NA18906.hp1
NA18944.hp2
NA18945.hp1
NA18946.hp1
NA18956.hp1
NA18956.hp2
NA19043.hp2
NA19064.hp1
NA19081.hp1
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*636_*637delTA
c.*636_*637delTA
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 636 chr12 56360587
chr12:56360682 C
C
 T
T
 10 a0001c0001t0002
a0001c0001t0004
a0001c0010t0002
others(7): Show 
a0001c0001t0002
a0001c0001t0004
a0001c0010t0002
a0002c0002t0002
a0002c0002t0004
a0002c0003t0002
a0002c0004t0002
a0002c0004t0004
a0002c0004t0006
a0006c0007t0002
 63 HG01109.hp1
HG01167.hp1
HG01169.hp1
others(60): Show 
HG01109.hp1
HG01167.hp1
HG01169.hp1
HG01243.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02257.hp1
HG02257.hp2
HG02451.hp1
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02630.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG06807.hp2
NA18522.hp1
NA18906.hp1
NA19030.hp2
NA19043.hp2
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*543G>A
c.*543G>A
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 543 chr12 56360682
chr12:56360696 G
G
 A
A
 1 a0001c0001t0005
a0001c0001t0005
 1 HG02074.hp1
HG02074.hp1
 3_prime_UTR_variant MODIFIER c.*529C>T
c.*529C>T
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 529 chr12 56360696
chr12:56360748 T
T
 C
C
 1 a0002c0004t0006
a0002c0004t0006
 1 NA19043.hp2
NA19043.hp2
 3_prime_UTR_variant MODIFIER c.*477A>G
c.*477A>G
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 477 chr12 56360748
chr12:56361042 C
C
 A
A
 1 a0001c0001t0007
a0001c0001t0007
 1 NA18972.hp2
NA18972.hp2
 3_prime_UTR_variant MODIFIER c.*183G>T
c.*183G>T
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 2/2 183 chr12 56361042
chr12:56362765 G
G
 A
A
 1 a0001c0001t0008
a0001c0001t0008
 1 HG00323.hp2
HG00323.hp2
 5_prime_UTR_variant MODIFIER c.-20C>T
c.-20C>T
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 1/2 20 chr12 56362765
chr12:56362778 G
G
 A
A
 1 a0001c0001t0009
a0001c0001t0009
 1 HG02602.hp2
HG02602.hp2
 5_prime_UTR_variant MODIFIER c.-33C>T
c.-33C>T
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 1/2 33 chr12 56362778

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr12:56362322 C
C
 A
A
 1 a0005c0008t0003g0016
a0005c0008t0003g0016
 2 HG02040.hp1
HG02083.hp1
HG02040.hp1
HG02083.hp1
 intron_variant MODIFIER c.17-133G>T
c.17-133G>T
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 1/1 chr12 56362322
chr12:56362392 C
C
 T
T
 1 a0001c0001t0001g0013
a0001c0001t0001g0013
 2 HG00738.hp2
HG01081.hp2
HG00738.hp2
HG01081.hp2
 intron_variant MODIFIER c.17-203G>A
c.17-203G>A
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 1/1 chr12 56362392
chr12:56362583 G
G
 A
A
 1 a0005c0008t0003g0016
a0005c0008t0003g0016
 2 HG02040.hp1
HG02083.hp1
HG02040.hp1
HG02083.hp1
 intron_variant MODIFIER c.16+147C>T
c.16+147C>T
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 1/1 chr12 56362583
chr12:56362612 A
A
 C
C
 1 a0001c0001t0001g0012
a0001c0001t0001g0012
 2 HG01516.hp1
NA19043.hp1
HG01516.hp1
NA19043.hp1
 intron_variant MODIFIER c.16+118T>G
c.16+118T>G
APOF ENSG00000175336.10 transcript ENST00000398189.4 protein_coding 1/1 chr12 56362612

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

IGV Connection Help

IGV must be running on your computer before clicking the button.

If your browser shows the "cannot open the page" error, launch IGV and allow access via port 60151:

  1. Open IGV on your computer
  2. In IGV's menu bar: View → Preferences…
  3. Click on the "Advanced" tab
  4. Check "Enable port"
  5. Set the port number to 60151
  6. Click OK to save

For more details, please refer to Information → FAQ.