JoGo: Joint Open Genome and Omics Platform

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geneid	3198
ensemblid	ENSG00000105991.10
hgncid	5099
symbol	HOXA1
name	homeobox A1
refseq_nuc	NM_005522.5
refseq_prot	NP_005513.2
ensembl_nuc	ENST00000643460.2
ensembl_prot	ENSP00000494260.2
mane_status	MANE Select
chr	chr7
start	27092993
end	27096000
strand	-
ver	v1.2
region	chr7:27092993-27096000
region5000	chr7:27087993-27101000
regionname0	HOXA1_chr7_27092993_27096000
regionname5000	HOXA1_chr7_27087993_27101000

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	335	314	27	63	170	14	40	128	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002	1/1	335	89	67	15	3	0	2	3	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0003	0/0	336	4	1	0	1	0	2	1	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0004	0/0	336	3	3	0	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0005	0/0	336	2	2	0	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0006	0/0	335	1	0	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0007	0/0	335	1	0	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	1008	308	27	63	165	13	40	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0002	1/0	1008	85	67	15	0	0	2	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0003	0/0	1011	4	1	0	1	0	2	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0004	0/0	1008	4	0	0	4	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0005	0/0	1011	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0006	0/0	1008	3	0	0	3	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0007	0/0	1011	2	2	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0008	0/0	1008	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0009	0/0	1008	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0010	0/0	1008	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0011	0/0	1008	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
c0012	0/1	1008	1	0	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	1536	375	89	74	161	12	38	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0002	0/0	1536	20	1	3	13	0	3	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0003	0/1	1536	8	1	0	0	3	3	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0004	0/0	1536	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0005	0/0	1536	2	2	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0006	0/0	1536	2	2	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0007	0/0	1536	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0008	0/0	1536	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0009	0/0	1536	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
t0010	0/0	1536	1	0	1	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	219	16	55	109	9	30	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0002	1/0	59	45	11	0	0	2	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0003	0/0	47	0	3	43	0	1	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0004	0/0	20	17	3	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0005	0/0	19	1	3	12	0	3	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0006	0/0	7	1	0	0	3	3	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0007	0/0	7	5	2	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0008	0/0	4	0	0	4	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0009	0/0	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0010	0/0	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0011	0/0	2	0	0	1	0	1	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0012	0/0	2	1	0	0	0	1	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0013	0/0	2	2	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0014	0/0	2	0	0	0	0	2	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0015	0/0	2	0	0	2	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0016	0/0	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0017	0/0	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0018	0/0	1	0	0	0	0	1	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0019	0/0	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0020	0/0	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0021	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0022	0/0	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0023	0/0	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0024	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0025	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0026	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0027	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0028	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0029	0/0	1	0	1	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0030	0/1	1	0	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
g0031	0/0	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	1008	308	27	63	165	13	40	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0004	0/0	1008	4	0	0	4	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0009	0/0	1008	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0010	0/0	1008	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0002	1/0	1008	85	67	15	0	0	2	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0006	0/0	1008	3	0	0	3	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0012	0/1	1008	1	0	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0003c0003	0/0	1011	4	1	0	1	0	2	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0004c0005	0/0	1011	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0005c0007	0/0	1011	2	2	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0006c0008	0/0	1008	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0007c0011	0/0	1008	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	2543	277	21	60	153	9	34	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0001t0002	0/0	2543	19	1	3	12	0	3	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0001t0003	0/0	2543	7	1	0	0	3	3	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0001t0004	0/0	2543	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0001t0005	0/0	2543	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0001t0007	0/0	2543	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0004t0001	0/0	2543	4	0	0	4	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0009t0001	0/0	2543	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0001c0010t0001	0/0	2543	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0002t0001	1/0	2543	79	62	14	0	0	2	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0002t0005	0/0	2543	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0002t0006	0/0	2543	2	2	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0002t0008	0/0	2543	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0002t0009	0/0	2543	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0002t0010	0/0	2543	1	0	1	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0006t0001	0/0	2543	2	0	0	2	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0006t0002	0/0	2543	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0002c0012t0003	0/1	2543	1	0	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0003c0003t0001	0/0	2546	4	1	0	1	0	2	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0004c0005t0001	0/0	2546	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0005c0007t0001	0/0	2546	2	2	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0006c0008t0001	0/0	2543	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000
a0007c0011t0001	0/0	2543	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	copy fasta	chr7	27087993	27101000

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	219	16	55	109	9	30	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0001g0003	0/0	47	0	3	43	0	1	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0001g0007	0/0	7	5	2	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0001g0014	0/0	2	0	0	0	0	2	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0001g0017	0/0	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0001g0018	0/0	1	0	0	0	0	1	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0002g0005	0/0	19	1	3	12	0	3	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0003g0006	0/0	7	1	0	0	3	3	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0004g0010	0/0	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0005g0021	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0001t0007g0020	0/0	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0004t0001g0008	0/0	4	0	0	4	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0009t0001g0019	0/0	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0001c0010t0001g0022	0/0	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0002t0001g0002	1/0	59	45	11	0	0	2	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0002t0001g0004	0/0	20	17	3	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0002t0005g0026	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0002t0006g0024	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0002t0006g0028	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0002t0008g0025	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0002t0009g0027	0/0	1	1	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0002t0010g0029	0/0	1	0	1	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0006t0001g0015	0/0	2	0	0	2	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0006t0002g0031	0/0	1	0	0	1	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0002c0012t0003g0030	0/1	1	0	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0003c0003t0001g0011	0/0	2	0	0	1	0	1	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0003c0003t0001g0012	0/0	2	1	0	0	0	1	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0004c0005t0001g0009	0/0	3	3	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0005c0007t0001g0013	0/0	2	2	0	0	0	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0006c0008t0001g0016	0/0	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
a0007c0011t0001g0023	0/0	1	0	0	0	1	0	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0007	g0020	EUR	GBR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00099	hp2	a0001	c0009	t0001	g0019	EUR	GBR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00140	hp2	a0001	c0001	t0003	g0006	EUR	GBR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00323	hp1	a0006	c0008	t0001	g0016	EUR	FIN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00323	hp2	a0007	c0011	t0001	g0023	EUR	FIN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00423	hp2	a0001	c0001	t0001	g0003	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00438	hp2	a0001	c0001	t0001	g0003	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00544	hp1	a0001	c0001	t0001	g0003	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00544	hp2	a0001	c0001	t0001	g0003	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00558	hp2	a0001	c0001	t0001	g0003	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00597	hp1	a0001	c0001	t0001	g0003	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00597	hp2	a0001	c0001	t0002	g0005	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00621	hp1	a0001	c0001	t0001	g0003	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00673	hp2	a0001	c0001	t0001	g0003	EAS	CHS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00735	hp1	a0002	c0002	t0001	g0002	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00738	hp1	a0002	c0002	t0001	g0002	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00738	hp2	a0001	c0001	t0001	g0003	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG00741	hp2	a0001	c0001	t0002	g0005	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01069	hp1	a0001	c0001	t0001	g0007	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01071	hp1	a0001	c0001	t0001	g0007	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01081	hp1	a0002	c0002	t0001	g0004	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01081	hp2	a0002	c0002	t0001	g0002	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01106	hp1	a0002	c0002	t0001	g0004	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01109	hp2	a0002	c0002	t0001	g0002	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01167	hp1	a0002	c0002	t0001	g0002	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01167	hp2	a0001	c0001	t0002	g0005	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01169	hp1	a0001	c0001	t0002	g0005	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01175	hp1	a0002	c0002	t0001	g0002	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01243	hp1	a0002	c0002	t0001	g0004	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01243	hp2	a0002	c0002	t0001	g0002	AMR	PUR	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01255	hp2	a0002	c0002	t0010	g0029	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01261	hp1	a0002	c0002	t0001	g0002	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01261	hp2	a0002	c0002	t0001	g0002	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01358	hp1	a0001	c0001	t0001	g0003	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01358	hp2	a0001	c0001	t0001	g0003	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01361	hp2	a0002	c0002	t0001	g0002	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01515	hp1	a0001	c0001	t0003	g0006	EUR	IBS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01517	hp2	a0001	c0001	t0003	g0006	EUR	IBS	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01884	hp2	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01891	hp1	a0003	c0003	t0001	g0012	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02027	hp2	a0001	c0001	t0001	g0003	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02055	hp1	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02055	hp2	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02071	hp2	a0001	c0001	t0001	g0003	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02074	hp1	a0001	c0001	t0001	g0003	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02080	hp2	a0001	c0001	t0002	g0005	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02083	hp1	a0001	c0001	t0002	g0005	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02083	hp2	a0001	c0001	t0001	g0003	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02135	hp1	a0001	c0001	t0001	g0003	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02145	hp1	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02155	hp2	a0001	c0001	t0001	g0003	EAS	CDX	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02165	hp2	a0001	c0001	t0001	g0003	EAS	CDX	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02257	hp1	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02257	hp2	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02258	hp2	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02280	hp1	a0002	c0002	t0001	g0004	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02280	hp2	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02300	hp1	a0002	c0002	t0001	g0002	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02451	hp1	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02523	hp1	a0001	c0001	t0001	g0003	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02572	hp1	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02572	hp2	a0002	c0002	t0001	g0004	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02602	hp1	a0001	c0001	t0001	g0014	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02615	hp1	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02615	hp2	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02622	hp1	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02622	hp2	a0002	c0002	t0008	g0025	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02630	hp1	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02630	hp2	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02647	hp1	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02647	hp2	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02683	hp2	a0001	c0001	t0001	g0018	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02717	hp1	a0001	c0001	t0005	g0021	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02717	hp2	a0002	c0002	t0001	g0004	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02723	hp1	a0002	c0002	t0006	g0024	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02723	hp2	a0002	c0002	t0001	g0004	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02809	hp2	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02818	hp1	a0002	c0002	t0001	g0004	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02818	hp2	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02886	hp1	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02886	hp2	a0004	c0005	t0001	g0009	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02895	hp1	a0005	c0007	t0001	g0013	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02895	hp2	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02896	hp1	a0001	c0001	t0004	g0010	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02896	hp2	a0001	c0001	t0004	g0010	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02897	hp1	a0001	c0001	t0004	g0010	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02897	hp2	a0005	c0007	t0001	g0013	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02922	hp1	a0001	c0001	t0001	g0007	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02922	hp2	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02965	hp1	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02970	hp1	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02970	hp2	a0002	c0002	t0001	g0004	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02976	hp1	a0001	c0001	t0001	g0007	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02976	hp2	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03017	hp1	a0001	c0001	t0002	g0005	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03041	hp1	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03041	hp2	a0002	c0002	t0001	g0002	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03098	hp1	a0002	c0002	t0001	g0004	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03130	hp1	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03130	hp2	a0001	c0001	t0001	g0007	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03139	hp1	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03139	hp2	a0001	c0001	t0001	g0007	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03195	hp1	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03195	hp2	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03209	hp1	a0002	c0002	t0001	g0002	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03209	hp2	a0002	c0002	t0001	g0004	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03225	hp1	a0002	c0002	t0001	g0004	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03225	hp2	a0002	c0002	t0001	g0002	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03453	hp1	a0002	c0002	t0001	g0004	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03453	hp2	a0002	c0002	t0001	g0002	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03486	hp2	a0002	c0002	t0001	g0002	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03491	hp1	a0002	c0002	t0001	g0002	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03492	hp2	a0002	c0002	t0001	g0002	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03516	hp1	a0002	c0002	t0001	g0002	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03516	hp2	a0002	c0002	t0001	g0004	AFR	ESN	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03540	hp1	a0002	c0002	t0001	g0004	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03540	hp2	a0002	c0002	t0001	g0004	AFR	GWD	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03579	hp1	a0001	c0001	t0002	g0005	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03579	hp2	a0004	c0005	t0001	g0009	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03669	hp2	a0003	c0003	t0001	g0011	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03688	hp2	a0001	c0001	t0003	g0006	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03704	hp1	a0003	c0003	t0001	g0012	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03704	hp2	a0001	c0001	t0002	g0005	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03710	hp2	a0001	c0001	t0003	g0006	SAS	PJL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03927	hp1	a0001	c0001	t0002	g0005	SAS	BEB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04115	hp2	a0001	c0001	t0003	g0006	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG04228	hp2	a0001	c0001	t0001	g0014	SAS	STU	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18522	hp1	a0002	c0002	t0001	g0002	AFR	YRI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18747	hp2	a0001	c0001	t0001	g0003	EAS	CHB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18906	hp1	a0001	c0001	t0001	g0007	AFR	YRI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18906	hp2	a0002	c0002	t0001	g0002	AFR	YRI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18940	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18942	hp2	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18946	hp1	a0002	c0006	t0001	g0015	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18947	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18953	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18954	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18957	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18960	hp1	a0002	c0006	t0001	g0015	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18960	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18964	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18966	hp1	a0002	c0006	t0002	g0031	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18967	hp2	a0001	c0001	t0001	g0017	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18968	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18973	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18974	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18974	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18977	hp2	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18978	hp1	a0001	c0004	t0001	g0008	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18979	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18979	hp2	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18980	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18982	hp1	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18982	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18984	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18987	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18988	hp2	a0001	c0004	t0001	g0008	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18991	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18997	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18997	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19000	hp1	a0001	c0010	t0001	g0022	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19003	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19005	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19010	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19012	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19030	hp2	a0002	c0002	t0006	g0028	AFR	LWK	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19043	hp2	a0002	c0002	t0001	g0002	AFR	LWK	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19055	hp1	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19056	hp1	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19057	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19058	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19063	hp2	a0001	c0004	t0001	g0008	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19064	hp2	a0001	c0004	t0001	g0008	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19065	hp2	a0003	c0003	t0001	g0011	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19068	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19077	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19079	hp1	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19079	hp2	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19083	hp1	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19083	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19086	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19088	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19089	hp1	a0001	c0001	t0002	g0005	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19089	hp2	a0001	c0001	t0001	g0003	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA19240	hp2	a0002	c0002	t0001	g0002	AFR	YRI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20129	hp1	a0002	c0002	t0001	g0002	AFR	ASW	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20129	hp2	a0002	c0002	t0001	g0004	AFR	ASW	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20905	hp1	a0001	c0001	t0001	g0003	SAS	GIH	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02109	hp1	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02109	hp2	a0002	c0002	t0001	g0004	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02486	hp1	a0002	c0002	t0001	g0004	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02486	hp2	a0002	c0002	t0005	g0026	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02559	hp1	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG02559	hp2	a0002	c0002	t0001	g0002	AFR	ACB	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03471	hp1	a0004	c0005	t0001	g0009	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG06807	hp1	a0001	c0001	t0003	g0006	AFR	USA	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
HG06807	hp2	a0002	c0002	t0001	g0004	AFR	USA	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA21309	hp1	a0002	c0002	t0001	g0002	AFR	LWK	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
NA21309	hp2	a0002	c0002	t0009	g0027	AFR	LWK	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
homoSapiens_chm13v2	hp1	a0002	c0012	t0003	g0030	REF	REF	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000
homoSapiens_grch38	hp1	a0002	c0002	t0001	g0002	REF	REF	HOXA1_chr7_27087993_27101000	HOXA1	chr7	27087993	27101000

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr7:27095347	T T	G G	1	a0004 a0004	3	HG02886.hp2 HG03471.hp1 HG03579.hp2 HG02886.hp2 HG03471.hp1 HG03579.hp2	missense_variant	MODERATE	c.566A>C c.566A>C	p.Glu189Ala p.Glu189Ala	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	654/2543	566/1008	189/335	chr7	27095347
chr7:27095477	G G	T T	2	a0006 a0007 a0006 a0007	2	HG00323.hp1 HG00323.hp2 HG00323.hp1 HG00323.hp2	missense_variant	MODERATE	c.436C>A c.436C>A	p.His146Asn p.His146Asn	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	524/2543	436/1008	146/335	chr7	27095477
chr7:27095695	C C	T T	4	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0006	322	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(319): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp1 HG02602.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03491.hp2 HG03492.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2	missense_variant	MODERATE	c.218G>A c.218G>A	p.Arg73His p.Arg73His	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	306/2543	218/1008	73/335	chr7	27095695
chr7:27095697	A A	ATGG ATGG	3	a0003 a0004 a0005 a0003 a0004 a0005	9	HG01891.hp1 HG02886.hp2 HG02895.hp1 others(6): Show HG01891.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG03471.hp1 HG03579.hp2 HG03669.hp2 HG03704.hp1 NA19065.hp2	disruptive_inframe_insertion	MODERATE	c.213_215dupCCA c.213_215dupCCA	p.His72dup p.His72dup	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	303/2543	215/1008	72/335	chr7	27095697

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr7:27094671	C C	T T	1	a0001c0009 a0001c0009	1	HG00099.hp2 HG00099.hp2	synonymous_variant	LOW	c.777G>A c.777G>A	p.Arg259Arg p.Arg259Arg	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	865/2543	777/1008	259/335	chr7	27094671
chr7:27095478	G G	A A	1	a0001c0010 a0001c0010	1	NA19000.hp1 NA19000.hp1	synonymous_variant	LOW	c.435C>T c.435C>T	p.His145His p.His145His	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	523/2543	435/1008	145/335	chr7	27095478
chr7:27095700	G G	A A	1	a0002c0012 a0002c0012	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.213C>T c.213C>T	p.His71His p.His71His	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	301/2543	213/1008	71/335	chr7	27095700
chr7:27095703	G G	A A	1	a0001c0004 a0001c0004	4	NA18978.hp1 NA18988.hp2 NA19063.hp2 others(1): Show NA18978.hp1 NA18988.hp2 NA19063.hp2 NA19064.hp2	synonymous_variant	LOW	c.210C>T c.210C>T	p.His70His p.His70His	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	298/2543	210/1008	70/335	chr7	27095703
chr7:27095706	G G	A A	1	a0002c0006 a0002c0006	3	NA18946.hp1 NA18960.hp1 NA18966.hp1 NA18946.hp1 NA18960.hp1 NA18966.hp1	synonymous_variant	LOW	c.207C>T c.207C>T	p.His69His p.His69His	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	295/2543	207/1008	69/335	chr7	27095706
chr7:27095739	C C	G G	1	a0004c0005 a0004c0005	3	HG02886.hp2 HG03471.hp1 HG03579.hp2 HG02886.hp2 HG03471.hp1 HG03579.hp2	synonymous_variant	LOW	c.174G>C c.174G>C	p.Gly58Gly p.Gly58Gly	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/2	262/2543	174/1008	58/335	chr7	27095739

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr7:27093095	A A	G G	1	a0002c0002t0006 a0002c0002t0006	2	HG02723.hp1 NA19030.hp2 HG02723.hp1 NA19030.hp2	3_prime_UTR_variant	MODIFIER	c.1345T>C c.1345T>C	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	1345	chr7	27093095
chr7:27093350	G G	A A	1	a0001c0001t0004 a0001c0001t0004	3	HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1	3_prime_UTR_variant	MODIFIER	c.1090C>T c.1090C>T	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	1090	chr7	27093350
chr7:27093391	C C	T T	1	a0002c0002t0009 a0002c0002t0009	1	NA21309.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1049G>A c.1049G>A	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	1049	chr7	27093391
chr7:27093533	T T	C C	2	a0001c0001t0002 a0002c0006t0002 a0001c0001t0002 a0002c0006t0002	20	HG00597.hp2 HG00741.hp2 HG01167.hp2 others(17): Show HG00597.hp2 HG00741.hp2 HG01167.hp2 HG01169.hp1 HG02080.hp2 HG02083.hp1 HG03017.hp1 HG03579.hp1 HG03704.hp2 HG03927.hp1 NA18942.hp2 NA18966.hp1 NA18977.hp2 NA18979.hp2 NA18982.hp1 NA19055.hp1 NA19056.hp1 NA19079.hp2 NA19083.hp1 NA19089.hp1	3_prime_UTR_variant	MODIFIER	c.907A>G c.907A>G	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	907	chr7	27093533
chr7:27093877	C C	G G	1	a0001c0001t0007 a0001c0001t0007	1	HG00099.hp1 HG00099.hp1	3_prime_UTR_variant	MODIFIER	c.563G>C c.563G>C	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	563	chr7	27093877
chr7:27093970	A A	T T	2	a0001c0001t0005 a0002c0002t0005 a0001c0001t0005 a0002c0002t0005	2	HG02486.hp2 HG02717.hp1 HG02486.hp2 HG02717.hp1	3_prime_UTR_variant	MODIFIER	c.470T>A c.470T>A	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	470	chr7	27093970
chr7:27094095	G G	A A	1	a0002c0002t0010 a0002c0002t0010	1	HG01255.hp2 HG01255.hp2	3_prime_UTR_variant	MODIFIER	c.345C>T c.345C>T	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	345	chr7	27094095
chr7:27094257	C C	G G	1	a0002c0002t0008 a0002c0002t0008	1	HG02622.hp2 HG02622.hp2	3_prime_UTR_variant	MODIFIER	c.183G>C c.183G>C	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	183	chr7	27094257
chr7:27094259	C C	T T	1	a0001c0001t0007 a0001c0001t0007	1	HG00099.hp1 HG00099.hp1	3_prime_UTR_variant	MODIFIER	c.181G>A c.181G>A	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	181	chr7	27094259
chr7:27094384	G G	T T	2	a0001c0001t0003 a0002c0012t0003 a0001c0001t0003 a0002c0012t0003	8	HG00140.hp2 HG01515.hp1 HG01517.hp2 others(5): Show HG00140.hp2 HG01515.hp1 HG01517.hp2 HG03688.hp2 HG03710.hp2 HG04115.hp2 HG06807.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.56C>A c.56C>A	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	2/2	56	chr7	27094384

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr7:27094856	T T	A A	1	a0001c0001t0001g0014 a0001c0001t0001g0014	2	HG02602.hp1 HG04228.hp2 HG02602.hp1 HG04228.hp2	intron_variant	MODIFIER	c.653-61A>T c.653-61A>T	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/1	chr7	27094856
chr7:27095019	C C	T T	3	a0001c0001t0001g0003 a0001c0010t0001g0022 a0003c0003t0001g0011 a0001c0001t0001g0003 a0001c0010t0001g0022 a0003c0003t0001g0011	50	HG00423.hp2 HG00438.hp2 HG00544.hp1 others(47): Show HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp2 HG00738.hp2 HG01358.hp1 HG01358.hp2 HG02027.hp2 HG02071.hp2 HG02074.hp1 HG02083.hp2 HG02135.hp1 HG02155.hp2 HG02165.hp2 HG02523.hp1 HG03669.hp2 NA18747.hp2 NA18940.hp2 NA18947.hp2 NA18954.hp1 NA18957.hp2 NA18960.hp2 NA18964.hp2 NA18968.hp2 NA18973.hp1 NA18974.hp2 NA18979.hp1 NA18980.hp1 NA18982.hp2 NA18984.hp1 NA18987.hp1 NA18997.hp2 NA19000.hp1 NA19003.hp2 NA19005.hp1 NA19010.hp2 NA19012.hp1 NA19057.hp1 NA19058.hp1 NA19065.hp2 NA19068.hp2 NA19077.hp2 NA19079.hp1 NA19088.hp2 NA19089.hp2 NA20905.hp1	intron_variant	MODIFIER	c.653-224G>A c.653-224G>A	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/1	chr7	27095019
chr7:27095040	C C	T T	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.652+221G>A c.652+221G>A	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/1	chr7	27095040
chr7:27095168	T T	A A	1	a0001c0001t0001g0007 a0001c0001t0001g0007	7	HG01069.hp1 HG01071.hp1 HG02922.hp1 others(4): Show HG01069.hp1 HG01071.hp1 HG02922.hp1 HG02976.hp1 HG03130.hp2 HG03139.hp2 NA18906.hp1	intron_variant	MODIFIER	c.652+93A>T c.652+93A>T	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/1	chr7	27095168
chr7:27095169	A A	T T	2	a0002c0002t0001g0004 a0002c0002t0006g0024 a0002c0002t0001g0004 a0002c0002t0006g0024	21	HG01081.hp1 HG01106.hp1 HG01243.hp1 others(18): Show HG01081.hp1 HG01106.hp1 HG01243.hp1 HG02109.hp2 HG02280.hp1 HG02486.hp1 HG02572.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02970.hp2 HG03098.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG06807.hp2 NA20129.hp2	intron_variant	MODIFIER	c.652+92T>A c.652+92T>A	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/1	chr7	27095169
chr7:27095187	A A	G G	1	a0001c0001t0001g0017 a0001c0001t0001g0017	1	NA18967.hp2 NA18967.hp2	intron_variant	MODIFIER	c.652+74T>C c.652+74T>C	HOXA1	ENSG00000105991.10	transcript	ENST00000643460.2	protein_coding	1/1	chr7	27095187

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 7)

CCoding Level Haplotype Info (Total: 12)

TTranscript Level Haplotype Info (Total: 10)

GGenebody Level Haplotype Info (Total: 31)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 12)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 23)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 31)

Haplotype Details by Sample (Haploid Level) (Total: 414)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (Synonymous Mutations) (Total: 6)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 10)

GGenebody Level Haplotype Variants (Intron) (Total: 6)

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Annotation (Repeats)

Annotation (SNP Array)