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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   HOXA1_chr7_27087993_27101000  HOXA1_chr7_27087993_27101000 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 3198
ensemblid ENSG00000105991.10
hgncid 5099
symbol HOXA1
name homeobox A1
refseq_nuc NM_005522.5
refseq_prot NP_005513.2
ensembl_nuc ENST00000643460.2
ensembl_prot ENSP00000494260.2
mane_status MANE Select
chr chr7
start 27092993
end 27096000
strand -
ver v1.2
region chr7:27092993-27096000
region5000 chr7:27087993-27101000
regionname0 HOXA1_chr7_27092993_27096000
regionname5000 HOXA1_chr7_27087993_27101000

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 0/0 335 314 27 63 170 14 40 128 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002 1/1 335 89 67 15 3 0 2 3 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0003 0/0 336 4 1 0 1 0 2 1 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0004 0/0 336 3 3 0 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0005 0/0 336 2 2 0 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0006 0/0 335 1 0 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0007 0/0 335 1 0 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 0/0 1008 308 27 63 165 13 40 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0002 1/0 1008 85 67 15 0 0 2 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0003 0/0 1011 4 1 0 1 0 2 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0004 0/0 1008 4 0 0 4 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0005 0/0 1011 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0006 0/0 1008 3 0 0 3 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0007 0/0 1011 2 2 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0008 0/0 1008 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0009 0/0 1008 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0010 0/0 1008 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0011 0/0 1008 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
c0012 0/1 1008 1 0 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 1/0 1536 375 89 74 161 12 38 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0002 0/0 1536 20 1 3 13 0 3 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0003 0/1 1536 8 1 0 0 3 3 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0004 0/0 1536 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0005 0/0 1536 2 2 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0006 0/0 1536 2 2 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0007 0/0 1536 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0008 0/0 1536 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0009 0/0 1536 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
t0010 0/0 1536 1 0 1 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 219 16 55 109 9 30 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0002 1/0 59 45 11 0 0 2 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0003 0/0 47 0 3 43 0 1 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0004 0/0 20 17 3 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0005 0/0 19 1 3 12 0 3 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0006 0/0 7 1 0 0 3 3 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0007 0/0 7 5 2 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0008 0/0 4 0 0 4 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0009 0/0 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0010 0/0 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0011 0/0 2 0 0 1 0 1 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0012 0/0 2 1 0 0 0 1 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0013 0/0 2 2 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0014 0/0 2 0 0 0 0 2 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0015 0/0 2 0 0 2 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0016 0/0 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0017 0/0 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0018 0/0 1 0 0 0 0 1 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0019 0/0 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0020 0/0 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0021 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0022 0/0 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0023 0/0 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0024 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0025 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0026 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0027 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0028 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0029 0/0 1 0 1 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0030 0/1 1 0 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
g0031 0/0 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 0/0 1008 308 27 63 165 13 40 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0004 0/0 1008 4 0 0 4 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0009 0/0 1008 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0010 0/0 1008 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0002 1/0 1008 85 67 15 0 0 2 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0006 0/0 1008 3 0 0 3 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0012 0/1 1008 1 0 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0003c0003 0/0 1011 4 1 0 1 0 2 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0004c0005 0/0 1011 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0005c0007 0/0 1011 2 2 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0006c0008 0/0 1008 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0007c0011 0/0 1008 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 2543 277 21 60 153 9 34 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0001t0002 0/0 2543 19 1 3 12 0 3 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0001t0003 0/0 2543 7 1 0 0 3 3 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0001t0004 0/0 2543 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0001t0005 0/0 2543 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0001t0007 0/0 2543 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0004t0001 0/0 2543 4 0 0 4 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0009t0001 0/0 2543 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0001c0010t0001 0/0 2543 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0002t0001 1/0 2543 79 62 14 0 0 2 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0002t0005 0/0 2543 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0002t0006 0/0 2543 2 2 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0002t0008 0/0 2543 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0002t0009 0/0 2543 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0002t0010 0/0 2543 1 0 1 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0006t0001 0/0 2543 2 0 0 2 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0006t0002 0/0 2543 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0002c0012t0003 0/1 2543 1 0 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0003c0003t0001 0/0 2546 4 1 0 1 0 2 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0004c0005t0001 0/0 2546 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0005c0007t0001 0/0 2546 2 2 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0006c0008t0001 0/0 2543 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000
a0007c0011t0001 0/0 2543 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 copy fasta chr7 27087993 27101000

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 219 16 55 109 9 30 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0001g0003 0/0 47 0 3 43 0 1 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0001g0007 0/0 7 5 2 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0001g0014 0/0 2 0 0 0 0 2 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0001g0017 0/0 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0001g0018 0/0 1 0 0 0 0 1 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0002g0005 0/0 19 1 3 12 0 3 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0003g0006 0/0 7 1 0 0 3 3 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0004g0010 0/0 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0005g0021 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0001t0007g0020 0/0 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0004t0001g0008 0/0 4 0 0 4 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0009t0001g0019 0/0 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0001c0010t0001g0022 0/0 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0002t0001g0002 1/0 59 45 11 0 0 2 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0002t0001g0004 0/0 20 17 3 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0002t0005g0026 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0002t0006g0024 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0002t0006g0028 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0002t0008g0025 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0002t0009g0027 0/0 1 1 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0002t0010g0029 0/0 1 0 1 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0006t0001g0015 0/0 2 0 0 2 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0006t0002g0031 0/0 1 0 0 1 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0002c0012t0003g0030 0/1 1 0 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0003c0003t0001g0011 0/0 2 0 0 1 0 1 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0003c0003t0001g0012 0/0 2 1 0 0 0 1 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0004c0005t0001g0009 0/0 3 3 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0005c0007t0001g0013 0/0 2 2 0 0 0 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0006c0008t0001g0016 0/0 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
a0007c0011t0001g0023 0/0 1 0 0 0 1 0 HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0007 g0020 EUR GBR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00099 hp2 a0001 c0009 t0001 g0019 EUR GBR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00140 hp1 a0001 c0001 t0001 g0001 EUR GBR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00140 hp2 a0001 c0001 t0003 g0006 EUR GBR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00280 hp1 a0001 c0001 t0001 g0001 EUR FIN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00280 hp2 a0001 c0001 t0001 g0001 EUR FIN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00323 hp1 a0006 c0008 t0001 g0016 EUR FIN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00323 hp2 a0007 c0011 t0001 g0023 EUR FIN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00423 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00423 hp2 a0001 c0001 t0001 g0003 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00438 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00438 hp2 a0001 c0001 t0001 g0003 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00544 hp1 a0001 c0001 t0001 g0003 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00544 hp2 a0001 c0001 t0001 g0003 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00558 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00558 hp2 a0001 c0001 t0001 g0003 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00597 hp1 a0001 c0001 t0001 g0003 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00597 hp2 a0001 c0001 t0002 g0005 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00609 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00609 hp2 a0001 c0001 t0001 g0001 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00621 hp1 a0001 c0001 t0001 g0003 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00621 hp2 a0001 c0001 t0001 g0001 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00642 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00642 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00673 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00673 hp2 a0001 c0001 t0001 g0003 EAS CHS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00733 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00733 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00735 hp1 a0002 c0002 t0001 g0002 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00735 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00738 hp1 a0002 c0002 t0001 g0002 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00738 hp2 a0001 c0001 t0001 g0003 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00741 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG00741 hp2 a0001 c0001 t0002 g0005 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01069 hp1 a0001 c0001 t0001 g0007 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01069 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01070 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01070 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01071 hp1 a0001 c0001 t0001 g0007 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01071 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01081 hp1 a0002 c0002 t0001 g0004 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01081 hp2 a0002 c0002 t0001 g0002 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01099 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01099 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01106 hp1 a0002 c0002 t0001 g0004 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01106 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01109 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01109 hp2 a0002 c0002 t0001 g0002 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01167 hp1 a0002 c0002 t0001 g0002 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01167 hp2 a0001 c0001 t0002 g0005 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01168 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01168 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01169 hp1 a0001 c0001 t0002 g0005 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01169 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01175 hp1 a0002 c0002 t0001 g0002 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01175 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01243 hp1 a0002 c0002 t0001 g0004 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01243 hp2 a0002 c0002 t0001 g0002 AMR PUR HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01255 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01255 hp2 a0002 c0002 t0010 g0029 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01256 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01256 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01258 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01258 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01261 hp1 a0002 c0002 t0001 g0002 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01261 hp2 a0002 c0002 t0001 g0002 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01346 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01346 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01358 hp1 a0001 c0001 t0001 g0003 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01358 hp2 a0001 c0001 t0001 g0003 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01361 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01361 hp2 a0002 c0002 t0001 g0002 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01433 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01433 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01496 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01496 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01515 hp1 a0001 c0001 t0003 g0006 EUR IBS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01515 hp2 a0001 c0001 t0001 g0001 EUR IBS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01517 hp1 a0001 c0001 t0001 g0001 EUR IBS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01517 hp2 a0001 c0001 t0003 g0006 EUR IBS HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01884 hp1 a0001 c0001 t0001 g0001 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01884 hp2 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01891 hp1 a0003 c0003 t0001 g0012 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01891 hp2 a0001 c0001 t0001 g0001 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01928 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01928 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01934 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01934 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01952 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01952 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01975 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01975 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01978 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01978 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01981 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01981 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01993 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01993 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02004 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02004 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02027 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02027 hp2 a0001 c0001 t0001 g0003 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02040 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02040 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02055 hp1 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02055 hp2 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02071 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02071 hp2 a0001 c0001 t0001 g0003 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02074 hp1 a0001 c0001 t0001 g0003 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02074 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02080 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02080 hp2 a0001 c0001 t0002 g0005 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02083 hp1 a0001 c0001 t0002 g0005 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02083 hp2 a0001 c0001 t0001 g0003 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02129 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02129 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02132 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02132 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02135 hp1 a0001 c0001 t0001 g0003 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02135 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02145 hp1 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02145 hp2 a0001 c0001 t0001 g0001 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02148 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02148 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02155 hp1 a0001 c0001 t0001 g0001 EAS CDX HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02155 hp2 a0001 c0001 t0001 g0003 EAS CDX HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02165 hp1 a0001 c0001 t0001 g0001 EAS CDX HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02165 hp2 a0001 c0001 t0001 g0003 EAS CDX HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02257 hp1 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02257 hp2 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02258 hp1 a0001 c0001 t0001 g0001 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02258 hp2 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02273 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02273 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02280 hp1 a0002 c0002 t0001 g0004 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02280 hp2 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02293 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02293 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02300 hp1 a0002 c0002 t0001 g0002 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02300 hp2 a0001 c0001 t0001 g0001 AMR PEL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02451 hp1 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02451 hp2 a0001 c0001 t0001 g0001 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02523 hp1 a0001 c0001 t0001 g0003 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02523 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02572 hp1 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02572 hp2 a0002 c0002 t0001 g0004 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02602 hp1 a0001 c0001 t0001 g0014 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02602 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02615 hp1 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02615 hp2 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02622 hp1 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02622 hp2 a0002 c0002 t0008 g0025 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02630 hp1 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02630 hp2 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02647 hp1 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02647 hp2 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02683 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02683 hp2 a0001 c0001 t0001 g0018 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02698 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02698 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02717 hp1 a0001 c0001 t0005 g0021 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02717 hp2 a0002 c0002 t0001 g0004 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02723 hp1 a0002 c0002 t0006 g0024 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02723 hp2 a0002 c0002 t0001 g0004 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02735 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02735 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02738 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02738 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02809 hp1 a0001 c0001 t0001 g0001 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02809 hp2 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02818 hp1 a0002 c0002 t0001 g0004 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02818 hp2 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02886 hp1 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02886 hp2 a0004 c0005 t0001 g0009 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02895 hp1 a0005 c0007 t0001 g0013 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02895 hp2 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02896 hp1 a0001 c0001 t0004 g0010 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02896 hp2 a0001 c0001 t0004 g0010 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02897 hp1 a0001 c0001 t0004 g0010 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02897 hp2 a0005 c0007 t0001 g0013 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02922 hp1 a0001 c0001 t0001 g0007 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02922 hp2 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02965 hp1 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02965 hp2 a0001 c0001 t0001 g0001 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02970 hp1 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02970 hp2 a0002 c0002 t0001 g0004 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02976 hp1 a0001 c0001 t0001 g0007 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02976 hp2 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03017 hp1 a0001 c0001 t0002 g0005 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03017 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03041 hp1 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03041 hp2 a0002 c0002 t0001 g0002 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03098 hp1 a0002 c0002 t0001 g0004 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03098 hp2 a0001 c0001 t0001 g0001 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03130 hp1 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03130 hp2 a0001 c0001 t0001 g0007 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03139 hp1 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03139 hp2 a0001 c0001 t0001 g0007 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03195 hp1 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03195 hp2 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03209 hp1 a0002 c0002 t0001 g0002 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03209 hp2 a0002 c0002 t0001 g0004 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03225 hp1 a0002 c0002 t0001 g0004 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03225 hp2 a0002 c0002 t0001 g0002 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03453 hp1 a0002 c0002 t0001 g0004 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03453 hp2 a0002 c0002 t0001 g0002 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03486 hp1 a0001 c0001 t0001 g0001 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03486 hp2 a0002 c0002 t0001 g0002 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03491 hp1 a0002 c0002 t0001 g0002 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03491 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03492 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03492 hp2 a0002 c0002 t0001 g0002 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03516 hp1 a0002 c0002 t0001 g0002 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03516 hp2 a0002 c0002 t0001 g0004 AFR ESN HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03540 hp1 a0002 c0002 t0001 g0004 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03540 hp2 a0002 c0002 t0001 g0004 AFR GWD HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03579 hp1 a0001 c0001 t0002 g0005 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03579 hp2 a0004 c0005 t0001 g0009 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03654 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03654 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03669 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03669 hp2 a0003 c0003 t0001 g0011 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03688 hp1 a0001 c0001 t0001 g0001 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03688 hp2 a0001 c0001 t0003 g0006 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03704 hp1 a0003 c0003 t0001 g0012 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03704 hp2 a0001 c0001 t0002 g0005 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03710 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03710 hp2 a0001 c0001 t0003 g0006 SAS PJL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03831 hp1 a0001 c0001 t0001 g0001 SAS BEB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03831 hp2 a0001 c0001 t0001 g0001 SAS BEB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03834 hp1 a0001 c0001 t0001 g0001 SAS BEB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03834 hp2 a0001 c0001 t0001 g0001 SAS BEB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03927 hp1 a0001 c0001 t0002 g0005 SAS BEB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03927 hp2 a0001 c0001 t0001 g0001 SAS BEB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04115 hp1 a0001 c0001 t0001 g0001 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04115 hp2 a0001 c0001 t0003 g0006 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04184 hp1 a0001 c0001 t0001 g0001 SAS BEB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04184 hp2 a0001 c0001 t0001 g0001 SAS BEB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04199 hp1 a0001 c0001 t0001 g0001 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04199 hp2 a0001 c0001 t0001 g0001 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04204 hp1 a0001 c0001 t0001 g0001 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04204 hp2 a0001 c0001 t0001 g0001 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04228 hp1 a0001 c0001 t0001 g0001 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG04228 hp2 a0001 c0001 t0001 g0014 SAS STU HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18522 hp1 a0002 c0002 t0001 g0002 AFR YRI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18522 hp2 a0001 c0001 t0001 g0001 AFR YRI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18747 hp1 a0001 c0001 t0001 g0001 EAS CHB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18747 hp2 a0001 c0001 t0001 g0003 EAS CHB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18906 hp1 a0001 c0001 t0001 g0007 AFR YRI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18906 hp2 a0002 c0002 t0001 g0002 AFR YRI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18940 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18940 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18941 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18941 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18942 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18942 hp2 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18943 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18943 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18944 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18944 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18946 hp1 a0002 c0006 t0001 g0015 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18946 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18947 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18947 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18948 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18948 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18950 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18950 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18951 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18951 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18953 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18953 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18954 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18954 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18957 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18957 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18960 hp1 a0002 c0006 t0001 g0015 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18960 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18962 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18962 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18964 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18964 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18966 hp1 a0002 c0006 t0002 g0031 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18966 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18967 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18967 hp2 a0001 c0001 t0001 g0017 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18968 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18968 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18970 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18970 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18971 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18971 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18973 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18973 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18974 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18974 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18977 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18977 hp2 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18978 hp1 a0001 c0004 t0001 g0008 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18978 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18979 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18979 hp2 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18980 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18980 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18982 hp1 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18982 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18983 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18983 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18984 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18984 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18987 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18987 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18988 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18988 hp2 a0001 c0004 t0001 g0008 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18990 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18990 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18991 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18991 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18992 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18992 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18997 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18997 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18998 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18998 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18999 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA18999 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19000 hp1 a0001 c0010 t0001 g0022 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19000 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19003 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19003 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19005 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19005 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19007 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19007 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19009 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19009 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19010 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19010 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19011 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19011 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19012 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19012 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19030 hp1 a0001 c0001 t0001 g0001 AFR LWK HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19030 hp2 a0002 c0002 t0006 g0028 AFR LWK HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19043 hp1 a0001 c0001 t0001 g0001 AFR LWK HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19043 hp2 a0002 c0002 t0001 g0002 AFR LWK HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19055 hp1 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19055 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19056 hp1 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19056 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19057 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19057 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19058 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19058 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19060 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19060 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19063 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19063 hp2 a0001 c0004 t0001 g0008 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19064 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19064 hp2 a0001 c0004 t0001 g0008 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19065 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19065 hp2 a0003 c0003 t0001 g0011 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19066 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19066 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19067 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19067 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19068 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19068 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19077 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19077 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19079 hp1 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19079 hp2 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19080 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19080 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19083 hp1 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19083 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19085 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19085 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19086 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19086 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19088 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19088 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19089 hp1 a0001 c0001 t0002 g0005 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19089 hp2 a0001 c0001 t0001 g0003 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19091 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19091 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19240 hp1 a0001 c0001 t0001 g0001 AFR YRI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA19240 hp2 a0002 c0002 t0001 g0002 AFR YRI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20129 hp1 a0002 c0002 t0001 g0002 AFR ASW HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20129 hp2 a0002 c0002 t0001 g0004 AFR ASW HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20752 hp1 a0001 c0001 t0001 g0001 EUR TSI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20752 hp2 a0001 c0001 t0001 g0001 EUR TSI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20805 hp1 a0001 c0001 t0001 g0001 EUR TSI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20805 hp2 a0001 c0001 t0001 g0001 EUR TSI HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20905 hp1 a0001 c0001 t0001 g0003 SAS GIH HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20905 hp2 a0001 c0001 t0001 g0001 SAS GIH HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01123 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG01123 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02109 hp1 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02109 hp2 a0002 c0002 t0001 g0004 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02486 hp1 a0002 c0002 t0001 g0004 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02486 hp2 a0002 c0002 t0005 g0026 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02559 hp1 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG02559 hp2 a0002 c0002 t0001 g0002 AFR ACB HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03471 hp1 a0004 c0005 t0001 g0009 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG03471 hp2 a0001 c0001 t0001 g0001 AFR MSL HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG06807 hp1 a0001 c0001 t0003 g0006 AFR USA HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
HG06807 hp2 a0002 c0002 t0001 g0004 AFR USA HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20300 hp1 a0001 c0001 t0001 g0001 AFR USA HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA20300 hp2 a0001 c0001 t0001 g0001 AFR USA HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA21309 hp1 a0002 c0002 t0001 g0002 AFR LWK HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
NA21309 hp2 a0002 c0002 t0009 g0027 AFR LWK HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
homoSapiens_chm13v2 hp1 a0002 c0012 t0003 g0030 REF REF HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000
homoSapiens_grch38 hp1 a0002 c0002 t0001 g0002 REF REF HOXA1_chr7_27087993_27101000 HOXA1 chr7 27087993 27101000

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr7:27095347 T
T
 G
G
 1 a0004
a0004
 3 HG02886.hp2
HG03471.hp1
HG03579.hp2
HG02886.hp2
HG03471.hp1
HG03579.hp2
 missense_variant MODERATE c.566A>C
c.566A>C
 p.Glu189Ala
p.Glu189Ala
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 654/2543 566/1008 189/335 chr7 27095347
chr7:27095477 G
G
 T
T
 2 a0006
a0007
a0006
a0007
 2 HG00323.hp1
HG00323.hp2
HG00323.hp1
HG00323.hp2
 missense_variant MODERATE c.436C>A
c.436C>A
 p.His146Asn
p.His146Asn
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 524/2543 436/1008 146/335 chr7 27095477
chr7:27095695 C
C
 T
T
 4 a0001
a0003
a0004
others(1): Show 
a0001
a0003
a0004
a0006
 322 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(319): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp1
HG00423.hp1
HG00423.hp2
HG00438.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00733.hp1
HG00733.hp2
HG00735.hp2
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01167.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp2
HG01255.hp1
HG01256.hp1
HG01256.hp2
HG01258.hp1
HG01258.hp2
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01358.hp2
HG01361.hp1
HG01433.hp1
HG01433.hp2
HG01496.hp1
HG01496.hp2
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01891.hp1
HG01891.hp2
HG01928.hp1
HG01928.hp2
HG01934.hp1
HG01934.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02027.hp1
HG02027.hp2
HG02040.hp1
HG02040.hp2
HG02071.hp1
HG02071.hp2
HG02074.hp1
HG02074.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02129.hp1
HG02129.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp2
HG02451.hp2
HG02523.hp1
HG02523.hp2
HG02602.hp1
HG02602.hp2
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02886.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03017.hp1
HG03017.hp2
HG03098.hp2
HG03130.hp2
HG03139.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03491.hp2
HG03492.hp1
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03831.hp1
HG03831.hp2
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
NA18522.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18940.hp1
NA18940.hp2
NA18941.hp1
NA18941.hp2
NA18942.hp1
NA18942.hp2
NA18943.hp1
NA18943.hp2
NA18944.hp1
NA18944.hp2
NA18946.hp2
NA18947.hp1
NA18947.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18953.hp1
NA18953.hp2
NA18954.hp1
NA18954.hp2
NA18957.hp1
NA18957.hp2
NA18960.hp2
NA18962.hp1
NA18962.hp2
NA18964.hp1
NA18964.hp2
NA18966.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18970.hp1
NA18970.hp2
NA18971.hp1
NA18971.hp2
NA18973.hp1
NA18973.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18977.hp2
NA18978.hp1
NA18978.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18982.hp1
NA18982.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18990.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18992.hp1
NA18992.hp2
NA18997.hp1
NA18997.hp2
NA18998.hp1
NA18998.hp2
NA18999.hp1
NA18999.hp2
NA19000.hp1
NA19000.hp2
NA19003.hp1
NA19003.hp2
NA19005.hp1
NA19005.hp2
NA19007.hp1
NA19007.hp2
NA19009.hp1
NA19009.hp2
NA19010.hp1
NA19010.hp2
NA19011.hp1
NA19011.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19043.hp1
NA19055.hp1
NA19055.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19060.hp1
NA19060.hp2
NA19063.hp1
NA19063.hp2
NA19064.hp1
NA19064.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19067.hp1
NA19067.hp2
NA19068.hp1
NA19068.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19080.hp1
NA19080.hp2
NA19083.hp1
NA19083.hp2
NA19085.hp1
NA19085.hp2
NA19086.hp1
NA19086.hp2
NA19088.hp1
NA19088.hp2
NA19089.hp1
NA19089.hp2
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20752.hp2
NA20805.hp1
NA20805.hp2
NA20905.hp1
NA20905.hp2
 missense_variant MODERATE c.218G>A
c.218G>A
 p.Arg73His
p.Arg73His
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 306/2543 218/1008 73/335 chr7 27095695
chr7:27095697 A
A
 ATGG
ATGG
 3 a0003
a0004
a0005
a0003
a0004
a0005
 9 HG01891.hp1
HG02886.hp2
HG02895.hp1
others(6): Show 
HG01891.hp1
HG02886.hp2
HG02895.hp1
HG02897.hp2
HG03471.hp1
HG03579.hp2
HG03669.hp2
HG03704.hp1
NA19065.hp2
 disruptive_inframe_insertion MODERATE c.213_215dupCCA
c.213_215dupCCA
 p.His72dup
p.His72dup
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 303/2543 215/1008 72/335 chr7 27095697

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr7:27094671 C
C
 T
T
 1 a0001c0009
a0001c0009
 1 HG00099.hp2
HG00099.hp2
 synonymous_variant LOW c.777G>A
c.777G>A
 p.Arg259Arg
p.Arg259Arg
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 865/2543 777/1008 259/335 chr7 27094671
chr7:27095478 G
G
 A
A
 1 a0001c0010
a0001c0010
 1 NA19000.hp1
NA19000.hp1
 synonymous_variant LOW c.435C>T
c.435C>T
 p.His145His
p.His145His
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 523/2543 435/1008 145/335 chr7 27095478
chr7:27095700 G
G
 A
A
 1 a0002c0012
a0002c0012
 1 homoSapiens_chm13v2.hp1
homoSapiens_chm13v2.hp1
 synonymous_variant LOW c.213C>T
c.213C>T
 p.His71His
p.His71His
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 301/2543 213/1008 71/335 chr7 27095700
chr7:27095703 G
G
 A
A
 1 a0001c0004
a0001c0004
 4 NA18978.hp1
NA18988.hp2
NA19063.hp2
others(1): Show 
NA18978.hp1
NA18988.hp2
NA19063.hp2
NA19064.hp2
 synonymous_variant LOW c.210C>T
c.210C>T
 p.His70His
p.His70His
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 298/2543 210/1008 70/335 chr7 27095703
chr7:27095706 G
G
 A
A
 1 a0002c0006
a0002c0006
 3 NA18946.hp1
NA18960.hp1
NA18966.hp1
NA18946.hp1
NA18960.hp1
NA18966.hp1
 synonymous_variant LOW c.207C>T
c.207C>T
 p.His69His
p.His69His
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 295/2543 207/1008 69/335 chr7 27095706
chr7:27095739 C
C
 G
G
 1 a0004c0005
a0004c0005
 3 HG02886.hp2
HG03471.hp1
HG03579.hp2
HG02886.hp2
HG03471.hp1
HG03579.hp2
 synonymous_variant LOW c.174G>C
c.174G>C
 p.Gly58Gly
p.Gly58Gly
 HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/2 262/2543 174/1008 58/335 chr7 27095739

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr7:27093095 A
A
 G
G
 1 a0002c0002t0006
a0002c0002t0006
 2 HG02723.hp1
NA19030.hp2
HG02723.hp1
NA19030.hp2
 3_prime_UTR_variant MODIFIER c.*1345T>C
c.*1345T>C
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 1345 chr7 27093095
chr7:27093350 G
G
 A
A
 1 a0001c0001t0004
a0001c0001t0004
 3 HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02896.hp1
HG02896.hp2
HG02897.hp1
 3_prime_UTR_variant MODIFIER c.*1090C>T
c.*1090C>T
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 1090 chr7 27093350
chr7:27093391 C
C
 T
T
 1 a0002c0002t0009
a0002c0002t0009
 1 NA21309.hp2
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*1049G>A
c.*1049G>A
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 1049 chr7 27093391
chr7:27093533 T
T
 C
C
 2 a0001c0001t0002
a0002c0006t0002
a0001c0001t0002
a0002c0006t0002
 20 HG00597.hp2
HG00741.hp2
HG01167.hp2
others(17): Show 
HG00597.hp2
HG00741.hp2
HG01167.hp2
HG01169.hp1
HG02080.hp2
HG02083.hp1
HG03017.hp1
HG03579.hp1
HG03704.hp2
HG03927.hp1
NA18942.hp2
NA18966.hp1
NA18977.hp2
NA18979.hp2
NA18982.hp1
NA19055.hp1
NA19056.hp1
NA19079.hp2
NA19083.hp1
NA19089.hp1
 3_prime_UTR_variant MODIFIER c.*907A>G
c.*907A>G
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 907 chr7 27093533
chr7:27093877 C
C
 G
G
 1 a0001c0001t0007
a0001c0001t0007
 1 HG00099.hp1
HG00099.hp1
 3_prime_UTR_variant MODIFIER c.*563G>C
c.*563G>C
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 563 chr7 27093877
chr7:27093970 A
A
 T
T
 2 a0001c0001t0005
a0002c0002t0005
a0001c0001t0005
a0002c0002t0005
 2 HG02486.hp2
HG02717.hp1
HG02486.hp2
HG02717.hp1
 3_prime_UTR_variant MODIFIER c.*470T>A
c.*470T>A
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 470 chr7 27093970
chr7:27094095 G
G
 A
A
 1 a0002c0002t0010
a0002c0002t0010
 1 HG01255.hp2
HG01255.hp2
 3_prime_UTR_variant MODIFIER c.*345C>T
c.*345C>T
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 345 chr7 27094095
chr7:27094257 C
C
 G
G
 1 a0002c0002t0008
a0002c0002t0008
 1 HG02622.hp2
HG02622.hp2
 3_prime_UTR_variant MODIFIER c.*183G>C
c.*183G>C
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 183 chr7 27094257
chr7:27094259 C
C
 T
T
 1 a0001c0001t0007
a0001c0001t0007
 1 HG00099.hp1
HG00099.hp1
 3_prime_UTR_variant MODIFIER c.*181G>A
c.*181G>A
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 181 chr7 27094259
chr7:27094384 G
G
 T
T
 2 a0001c0001t0003
a0002c0012t0003
a0001c0001t0003
a0002c0012t0003
 8 HG00140.hp2
HG01515.hp1
HG01517.hp2
others(5): Show 
HG00140.hp2
HG01515.hp1
HG01517.hp2
HG03688.hp2
HG03710.hp2
HG04115.hp2
HG06807.hp1
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*56C>A
c.*56C>A
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 2/2 56 chr7 27094384

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr7:27094856 T
T
 A
A
 1 a0001c0001t0001g0014
a0001c0001t0001g0014
 2 HG02602.hp1
HG04228.hp2
HG02602.hp1
HG04228.hp2
 intron_variant MODIFIER c.653-61A>T
c.653-61A>T
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/1 chr7 27094856
chr7:27095019 C
C
 T
T
 3 a0001c0001t0001g0003
a0001c0010t0001g0022
a0003c0003t0001g0011
a0001c0001t0001g0003
a0001c0010t0001g0022
a0003c0003t0001g0011
 50 HG00423.hp2
HG00438.hp2
HG00544.hp1
others(47): Show 
HG00423.hp2
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00558.hp2
HG00597.hp1
HG00621.hp1
HG00673.hp2
HG00738.hp2
HG01358.hp1
HG01358.hp2
HG02027.hp2
HG02071.hp2
HG02074.hp1
HG02083.hp2
HG02135.hp1
HG02155.hp2
HG02165.hp2
HG02523.hp1
HG03669.hp2
NA18747.hp2
NA18940.hp2
NA18947.hp2
NA18954.hp1
NA18957.hp2
NA18960.hp2
NA18964.hp2
NA18968.hp2
NA18973.hp1
NA18974.hp2
NA18979.hp1
NA18980.hp1
NA18982.hp2
NA18984.hp1
NA18987.hp1
NA18997.hp2
NA19000.hp1
NA19003.hp2
NA19005.hp1
NA19010.hp2
NA19012.hp1
NA19057.hp1
NA19058.hp1
NA19065.hp2
NA19068.hp2
NA19077.hp2
NA19079.hp1
NA19088.hp2
NA19089.hp2
NA20905.hp1
 intron_variant MODIFIER c.653-224G>A
c.653-224G>A
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/1 chr7 27095019
chr7:27095040 C
C
 T
T
 1 a0001c0001t0001g0018
a0001c0001t0001g0018
 1 HG02683.hp2
HG02683.hp2
 intron_variant MODIFIER c.652+221G>A
c.652+221G>A
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/1 chr7 27095040
chr7:27095168 T
T
 A
A
 1 a0001c0001t0001g0007
a0001c0001t0001g0007
 7 HG01069.hp1
HG01071.hp1
HG02922.hp1
others(4): Show 
HG01069.hp1
HG01071.hp1
HG02922.hp1
HG02976.hp1
HG03130.hp2
HG03139.hp2
NA18906.hp1
 intron_variant MODIFIER c.652+93A>T
c.652+93A>T
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/1 chr7 27095168
chr7:27095169 A
A
 T
T
 2 a0002c0002t0001g0004
a0002c0002t0006g0024
a0002c0002t0001g0004
a0002c0002t0006g0024
 21 HG01081.hp1
HG01106.hp1
HG01243.hp1
others(18): Show 
HG01081.hp1
HG01106.hp1
HG01243.hp1
HG02109.hp2
HG02280.hp1
HG02486.hp1
HG02572.hp2
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02970.hp2
HG03098.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG06807.hp2
NA20129.hp2
 intron_variant MODIFIER c.652+92T>A
c.652+92T>A
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/1 chr7 27095169
chr7:27095187 A
A
 G
G
 1 a0001c0001t0001g0017
a0001c0001t0001g0017
 1 NA18967.hp2
NA18967.hp2
 intron_variant MODIFIER c.652+74T>C
c.652+74T>C
HOXA1 ENSG00000105991.10 transcript ENST00000643460.2 protein_coding 1/1 chr7 27095187

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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