Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	729396
ensemblid	ENSG00000224659.3
hgncid	17778
symbol	GAGE12J
name	G antigen 12J
refseq_nuc	NM_001098406.4
refseq_prot	NP_001091876.2
ensembl_nuc	ENST00000442437.3
ensembl_prot	ENSP00000409832.2
mane_status	MANE Select
chr	chrX
start	49322037
end	49329384
strand	+
ver	v1.2
region	chrX:49322037-49329384
region5000	chrX:49317037-49334384
regionname0	GAGE12J_chrX_49322037_49329384
regionname5000	GAGE12J_chrX_49317037_49334384

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	117	83	4	16	43	6	14	34	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0002	0/0	117	65	2	12	44	1	6	36	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0003	0/0	117	20	15	5	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0004	1/0	117	8	4	0	0	2	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0005	0/0	117	4	0	0	4	0	0	4	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0006	0/0	117	4	0	3	0	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0007	0/0	116	2	0	0	0	1	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0008	0/0	117	2	2	0	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0009	0/0	117	1	0	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0010	0/0	117	1	0	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0011	0/0	86	1	0	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0012	0/0	117	1	0	0	1	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0013	0/0	116	1	1	0	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0014	0/0	117	1	0	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	354	83	4	16	43	6	14	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0002	0/0	354	65	2	12	44	1	6	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0003	0/0	354	20	15	5	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0004	1/0	354	8	4	0	0	2	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0005	0/0	354	4	0	0	4	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0006	0/0	354	4	0	3	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0007	0/0	351	2	0	0	0	1	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0008	0/0	354	2	2	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0009	0/0	351	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0010	0/0	354	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0011	0/0	354	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0012	0/0	354	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0013	0/0	355	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
c0014	0/0	354	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	208	97	23	19	43	3	8	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
t0002	0/0	208	91	3	20	48	6	14	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
t0003	0/0	208	2	0	0	0	1	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
t0004	0/0	208	2	1	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
t0005	0/0	208	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
t0006	0/0	209	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	50	1	8	34	2	5	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0002	0/0	20	0	0	16	0	4	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0003	0/0	13	0	5	5	1	2	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0004	0/0	6	0	3	1	2	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0005	0/0	5	1	3	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0006	0/0	4	0	3	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0007	0/0	4	4	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0008	0/0	3	0	2	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0009	0/0	3	2	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0010	0/0	2	2	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0011	0/0	2	0	0	2	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0012	0/0	2	0	0	2	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0013	0/0	2	0	0	2	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0014	0/0	2	0	0	2	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0015	0/0	2	1	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0016	0/0	2	1	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0017	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0018	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0019	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0020	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0021	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0022	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0023	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0024	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0025	1/0	1	0	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0026	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0027	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0028	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0029	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0030	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0031	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0032	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0033	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0034	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0035	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0036	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0037	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0038	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0039	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0040	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0041	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0042	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0043	0/0	1	0	0	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0044	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0045	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0046	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0047	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0048	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0049	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0050	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0051	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0052	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0053	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0054	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0055	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0056	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0057	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0058	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0059	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0060	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0061	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0062	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0063	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0064	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0065	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0066	0/0	1	0	0	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0067	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0068	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0069	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0070	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0071	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0072	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0073	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0074	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0075	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0076	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0077	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0078	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0079	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0080	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0081	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0082	0/0	1	0	0	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0083	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0084	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0085	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0086	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0087	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
g0088	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	354	83	4	16	43	6	14	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0002c0002	0/0	354	65	2	12	44	1	6	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0003c0003	0/0	354	20	15	5	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0004c0004	1/0	354	8	4	0	0	2	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0005c0005	0/0	354	4	0	0	4	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0006c0006	0/0	354	4	0	3	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0007c0007	0/0	351	2	0	0	0	1	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0008c0008	0/0	354	2	2	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0009c0011	0/0	354	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0010c0012	0/0	354	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0011c0013	0/0	355	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0012c0014	0/0	354	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0013c0009	0/0	351	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0014c0010	0/0	354	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	561	2	0	1	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0001c0001t0002	0/0	561	79	3	14	43	6	13	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0001c0001t0004	0/0	561	2	1	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0002c0002t0001	0/0	561	64	2	12	43	1	6	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0002c0002t0006	0/0	562	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0003c0003t0001	0/0	561	20	15	5	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0004c0004t0001	1/0	561	8	4	0	0	2	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0005c0005t0002	0/0	561	4	0	0	4	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0006c0006t0002	0/0	561	4	0	3	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0007c0007t0003	0/0	558	2	0	0	0	1	1	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0008c0008t0001	0/0	561	2	2	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0009c0011t0002	0/0	561	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0010c0012t0002	0/0	561	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0011c0013t0002	0/0	562	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0012c0014t0002	0/0	561	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0013c0009t0005	0/0	558	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384
a0014c0010t0001	0/0	561	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	copy fasta	chrX	49317037	49334384

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0002	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0001g0057	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0002	0/0	19	0	0	16	0	3	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0003	0/0	13	0	5	5	1	2	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0004	0/0	6	0	3	1	2	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0008	0/0	2	0	1	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0012	0/0	2	0	0	2	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0013	0/0	2	0	0	2	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0014	0/0	2	0	0	2	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0041	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0045	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0048	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0049	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0050	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0051	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0052	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0053	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0054	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0055	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0056	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0058	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0059	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0060	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0061	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0062	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0063	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0066	0/0	1	0	0	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0067	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0068	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0069	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0071	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0073	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0074	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0075	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0076	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0077	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0078	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0079	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0080	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0081	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0082	0/0	1	0	0	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0002g0087	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0001c0001t0004g0015	0/0	2	1	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0001	0/0	45	0	7	34	0	4	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0005	0/0	2	0	1	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0010	0/0	2	2	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0017	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0019	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0020	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0027	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0028	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0029	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0030	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0032	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0033	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0034	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0035	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0036	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0038	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0039	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0001g0064	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0002c0002t0006g0018	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0005	0/0	3	1	2	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0007	0/0	3	3	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0009	0/0	3	2	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0016	0/0	2	1	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0023	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0026	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0037	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0040	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0083	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0084	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0085	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0086	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0003c0003t0001g0088	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0004c0004t0001g0001	0/0	3	0	0	0	2	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0004c0004t0001g0021	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0004c0004t0001g0022	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0004c0004t0001g0024	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0004c0004t0001g0025	1/0	1	0	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0004c0004t0001g0031	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0005c0005t0002g0011	0/0	2	0	0	2	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0005c0005t0002g0046	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0005c0005t0002g0047	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0006c0006t0002g0006	0/0	4	0	3	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0007c0007t0003g0043	0/0	1	0	0	0	1	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0007c0007t0003g0044	0/0	1	0	0	0	0	1	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0008c0008t0001g0001	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0008c0008t0001g0007	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0009c0011t0002g0008	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0010c0012t0002g0070	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0011c0013t0002g0065	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0012c0014t0002g0072	0/0	1	0	0	1	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0013c0009t0005g0042	0/0	1	1	0	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
a0014c0010t0001g0001	0/0	1	0	1	0	0	0	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0082	EUR	GBR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00099	hp2	a0002	c0002	t0001	g0005	EUR	GBR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00140	hp1	a0001	c0001	t0002	g0008	EUR	GBR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00280	hp1	a0007	c0007	t0003	g0043	EUR	FIN	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00408	hp1	a0002	c0002	t0001	g0001	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00408	hp2	a0001	c0001	t0002	g0002	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00423	hp1	a0002	c0002	t0001	g0001	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00423	hp2	a0001	c0001	t0002	g0041	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00438	hp1	a0002	c0002	t0001	g0039	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00438	hp2	a0001	c0001	t0002	g0055	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00558	hp1	a0002	c0002	t0001	g0001	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00558	hp2	a0002	c0002	t0001	g0001	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00621	hp1	a0001	c0001	t0002	g0052	EAS	CHS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00639	hp1	a0002	c0002	t0001	g0001	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00639	hp2	a0001	c0001	t0002	g0068	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00642	hp1	a0001	c0001	t0002	g0087	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00735	hp1	a0009	c0011	t0002	g0008	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG00735	hp2	a0002	c0002	t0001	g0064	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01070	hp1	a0003	c0003	t0001	g0026	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01070	hp2	a0001	c0001	t0002	g0004	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01071	hp1	a0002	c0002	t0001	g0001	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01071	hp2	a0001	c0001	t0002	g0004	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01074	hp1	a0002	c0002	t0001	g0001	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01081	hp1	a0003	c0003	t0001	g0009	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01081	hp2	a0001	c0001	t0002	g0003	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01099	hp1	a0006	c0006	t0002	g0006	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01106	hp1	a0006	c0006	t0002	g0006	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01167	hp1	a0003	c0003	t0001	g0005	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01168	hp1	a0001	c0001	t0002	g0003	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01168	hp2	a0002	c0002	t0001	g0029	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01169	hp1	a0003	c0003	t0001	g0005	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01169	hp2	a0001	c0001	t0002	g0003	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01175	hp1	a0002	c0002	t0001	g0005	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01175	hp2	a0001	c0001	t0002	g0003	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01192	hp1	a0011	c0013	t0002	g0065	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01243	hp1	a0003	c0003	t0001	g0016	AMR	PUR	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01255	hp1	a0001	c0001	t0004	g0015	AMR	CLM	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01256	hp1	a0002	c0002	t0001	g0001	AMR	CLM	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01358	hp1	a0002	c0002	t0001	g0001	AMR	CLM	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01361	hp1	a0006	c0006	t0002	g0006	AMR	CLM	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01361	hp2	a0001	c0001	t0002	g0003	AMR	CLM	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01433	hp1	a0001	c0001	t0002	g0079	AMR	CLM	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01515	hp1	a0001	c0001	t0002	g0004	EUR	IBS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01516	hp1	a0004	c0004	t0001	g0001	EUR	IBS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01516	hp2	a0001	c0001	t0002	g0066	EUR	IBS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01517	hp1	a0001	c0001	t0002	g0004	EUR	IBS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01517	hp2	a0004	c0004	t0001	g0001	EUR	IBS	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01928	hp1	a0014	c0010	t0001	g0001	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01943	hp1	a0002	c0002	t0001	g0001	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01952	hp1	a0001	c0001	t0002	g0008	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01978	hp1	a0001	c0001	t0002	g0077	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01978	hp2	a0001	c0001	t0002	g0004	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02040	hp1	a0001	c0001	t0002	g0002	EAS	KHV	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02056	hp1	a0002	c0002	t0001	g0019	EAS	KHV	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02071	hp1	a0002	c0002	t0001	g0001	EAS	KHV	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02083	hp1	a0001	c0001	t0002	g0002	EAS	KHV	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02129	hp1	a0001	c0001	t0002	g0014	EAS	KHV	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02135	hp1	a0001	c0001	t0002	g0054	EAS	KHV	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02148	hp1	a0002	c0002	t0001	g0027	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02148	hp2	a0010	c0012	t0002	g0070	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02258	hp1	a0004	c0004	t0001	g0024	AFR	ACB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02293	hp1	a0002	c0002	t0001	g0036	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02293	hp2	a0002	c0002	t0001	g0001	AMR	PEL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02451	hp1	a0001	c0001	t0002	g0081	AFR	ACB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02451	hp2	a0004	c0004	t0001	g0031	AFR	ACB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02572	hp1	a0003	c0003	t0001	g0005	AFR	GWD	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02602	hp1	a0002	c0002	t0001	g0030	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02615	hp1	a0002	c0002	t0001	g0010	AFR	GWD	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02615	hp2	a0008	c0008	t0001	g0001	AFR	GWD	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02622	hp1	a0013	c0009	t0005	g0042	AFR	GWD	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02622	hp2	a0003	c0003	t0001	g0083	AFR	GWD	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02647	hp1	a0003	c0003	t0001	g0023	AFR	GWD	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02683	hp1	a0002	c0002	t0001	g0001	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02683	hp2	a0001	c0001	t0002	g0056	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02723	hp1	a0001	c0001	t0002	g0076	AFR	GWD	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02723	hp2	a0003	c0003	t0001	g0040	AFR	GWD	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02735	hp1	a0001	c0001	t0002	g0002	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02738	hp1	a0007	c0007	t0003	g0044	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02922	hp1	a0003	c0003	t0001	g0084	AFR	ESN	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02922	hp2	a0008	c0008	t0001	g0007	AFR	ESN	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03017	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03098	hp1	a0003	c0003	t0001	g0007	AFR	MSL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03139	hp1	a0003	c0003	t0001	g0009	AFR	ESN	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03225	hp1	a0001	c0001	t0004	g0015	AFR	MSL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03239	hp1	a0002	c0002	t0001	g0038	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03239	hp2	a0001	c0001	t0002	g0080	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03486	hp1	a0003	c0003	t0001	g0088	AFR	MSL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03486	hp2	a0003	c0003	t0001	g0037	AFR	MSL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03490	hp1	a0001	c0001	t0002	g0074	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03492	hp1	a0001	c0001	t0002	g0002	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03516	hp1	a0003	c0003	t0001	g0007	AFR	ESN	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03516	hp2	a0001	c0001	t0002	g0071	AFR	ESN	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03654	hp1	a0006	c0006	t0002	g0006	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03669	hp1	a0001	c0001	t0002	g0003	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03669	hp2	a0001	c0001	t0002	g0059	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03688	hp1	a0001	c0001	t0002	g0003	SAS	STU	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03704	hp1	a0002	c0002	t0001	g0001	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03704	hp2	a0004	c0004	t0001	g0001	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03710	hp1	a0002	c0002	t0001	g0001	SAS	PJL	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03834	hp1	a0001	c0001	t0002	g0002	SAS	BEB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03834	hp2	a0001	c0001	t0002	g0060	SAS	BEB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG03942	hp1	a0002	c0002	t0001	g0001	SAS	BEB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG04115	hp1	a0001	c0001	t0002	g0049	SAS	STU	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG04228	hp1	a0001	c0001	t0002	g0061	SAS	STU	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18522	hp1	a0002	c0002	t0001	g0010	AFR	YRI	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18612	hp1	a0001	c0001	t0002	g0045	EAS	CHB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18747	hp1	a0002	c0002	t0001	g0001	EAS	CHB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18940	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18941	hp1	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18941	hp2	a0001	c0001	t0002	g0014	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18942	hp1	a0005	c0005	t0002	g0011	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18942	hp2	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18945	hp1	a0001	c0001	t0002	g0063	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18946	hp1	a0001	c0001	t0002	g0003	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18946	hp2	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18947	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18947	hp2	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18948	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18950	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18950	hp2	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18951	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18951	hp2	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18953	hp1	a0005	c0005	t0002	g0011	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18956	hp1	a0001	c0001	t0002	g0062	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18956	hp2	a0002	c0002	t0001	g0017	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18957	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18957	hp2	a0012	c0014	t0002	g0072	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18959	hp1	a0001	c0001	t0002	g0012	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18960	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18962	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18964	hp1	a0001	c0001	t0002	g0012	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18964	hp2	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18965	hp1	a0001	c0001	t0002	g0003	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18966	hp1	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18969	hp1	a0001	c0001	t0002	g0004	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18969	hp2	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18970	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18974	hp1	a0002	c0002	t0001	g0028	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18977	hp1	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18979	hp1	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18979	hp2	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18984	hp1	a0005	c0005	t0002	g0046	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18985	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18986	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18988	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18989	hp1	a0001	c0001	t0002	g0003	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18993	hp1	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18993	hp2	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18994	hp1	a0001	c0001	t0002	g0048	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18995	hp1	a0001	c0001	t0002	g0075	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18998	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18998	hp2	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19000	hp1	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19002	hp1	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19002	hp2	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19004	hp1	a0001	c0001	t0002	g0003	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19005	hp1	a0002	c0002	t0001	g0032	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19009	hp1	a0002	c0002	t0001	g0033	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19010	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19010	hp2	a0001	c0001	t0002	g0013	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19011	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19011	hp2	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19055	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19056	hp1	a0001	c0001	t0002	g0002	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19058	hp1	a0005	c0005	t0002	g0047	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19060	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19062	hp1	a0002	c0002	t0001	g0020	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19063	hp1	a0002	c0002	t0006	g0018	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19064	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19064	hp2	a0001	c0001	t0002	g0003	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19066	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19068	hp1	a0001	c0001	t0002	g0051	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19072	hp1	a0001	c0001	t0002	g0067	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19074	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19074	hp2	a0001	c0001	t0002	g0050	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19079	hp1	a0002	c0002	t0001	g0034	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19083	hp1	a0001	c0001	t0002	g0073	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19086	hp1	a0001	c0001	t0002	g0013	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19088	hp1	a0001	c0001	t0002	g0078	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19089	hp1	a0001	c0001	t0002	g0069	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19091	hp1	a0002	c0002	t0001	g0001	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19240	hp1	a0003	c0003	t0001	g0085	AFR	YRI	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA19240	hp2	a0003	c0003	t0001	g0086	AFR	YRI	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA20805	hp1	a0001	c0001	t0002	g0003	EUR	TSI	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA20905	hp1	a0001	c0001	t0002	g0058	SAS	GIH	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01123	hp1	a0001	c0001	t0002	g0053	AMR	CLM	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG01123	hp2	a0001	c0001	t0001	g0057	AMR	CLM	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02109	hp1	a0003	c0003	t0001	g0007	AFR	ACB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02109	hp2	a0003	c0003	t0001	g0009	AFR	ACB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02486	hp1	a0004	c0004	t0001	g0021	AFR	ACB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02559	hp1	a0003	c0003	t0001	g0016	AFR	ACB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
HG02559	hp2	a0004	c0004	t0001	g0022	AFR	ACB	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
NA18955	hp1	a0002	c0002	t0001	g0035	EAS	JPT	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384
homoSapiens_grch38	hp1	a0004	c0004	t0001	g0025	REF	REF	GAGE12J_chrX_49317037_49334384	GAGE12J	chrX	49317037	49334384

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:49323217	CTAT CTAT	C C	2	a0007 a0013 a0007 a0013	3	HG00280.hp1 HG02622.hp1 HG02738.hp1 HG00280.hp1 HG02622.hp1 HG02738.hp1	disruptive_inframe_deletion	MODERATE	c.29_31delATT c.29_31delATT	p.Tyr10del p.Tyr10del	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	145/561	29/354	10/117	INFO_REALIGN_3_PRIME	chrX	49323217
chrX:49323219	A A	G G	5	a0001 a0009 a0010 others(2): Show a0001 a0009 a0010 a0011 a0012	87	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	missense_variant	MODERATE	c.26A>G c.26A>G	p.Tyr9Cys p.Tyr9Cys	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	142/561	26/354	9/117		chrX	49323219
chrX:49323224	T T	C C	2	a0007 a0013 a0007 a0013	3	HG00280.hp1 HG02622.hp1 HG02738.hp1 HG00280.hp1 HG02622.hp1 HG02738.hp1	missense_variant	MODERATE	c.31T>C c.31T>C	p.Trp11Arg p.Trp11Arg	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	147/561	31/354	11/117		chrX	49323224
chrX:49323232	A A	T T	5	a0001 a0009 a0010 others(2): Show a0001 a0009 a0010 a0011 a0012	87	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	missense_variant	MODERATE	c.39A>T c.39A>T	p.Arg13Ser p.Arg13Ser	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	155/561	39/354	13/117		chrX	49323232
chrX:49323240	C C	G G	9	a0001 a0005 a0006 others(6): Show a0001 a0005 a0006 a0007 a0009 a0010 a0011 a0012 a0013	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	missense_variant	MODERATE	c.47C>G c.47C>G	p.Pro16Arg p.Pro16Arg	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	163/561	47/354	16/117		chrX	49323240
chrX:49323248	C C	G G	2	a0007 a0013 a0007 a0013	3	HG00280.hp1 HG02622.hp1 HG02738.hp1 HG00280.hp1 HG02622.hp1 HG02738.hp1	missense_variant	MODERATE	c.55C>G c.55C>G	p.Gln19Glu p.Gln19Glu	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	171/561	55/354	19/117		chrX	49323248
chrX:49323260	A A	G G	1	a0006 a0006	4	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(1): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1	missense_variant	MODERATE	c.67A>G c.67A>G	p.Met23Val p.Met23Val	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	183/561	67/354	23/117		chrX	49323260
chrX:49323269	C C	T T	1	a0012 a0012	1	NA18957.hp2 NA18957.hp2	missense_variant	MODERATE	c.76C>T c.76C>T	p.Pro26Ser p.Pro26Ser	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	192/561	76/354	26/117		chrX	49323269
chrX:49323276	G G	A A	5	a0001 a0009 a0010 others(2): Show a0001 a0009 a0010 a0011 a0012	87	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	missense_variant&splice_region_variant	MODERATE	c.83G>A c.83G>A	p.Arg28Gln p.Arg28Gln	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	199/561	83/354	28/117		chrX	49323276
chrX:49323806	C C	A A	2	a0003 a0008 a0003 a0008	22	HG01070.hp1 HG01081.hp1 HG01167.hp1 others(19): Show HG01070.hp1 HG01081.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG02109.hp1 HG02109.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp2 HG02647.hp1 HG02723.hp2 HG02922.hp1 HG02922.hp2 HG03098.hp1 HG03139.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 NA19240.hp1 NA19240.hp2	missense_variant	MODERATE	c.148C>A c.148C>A	p.Arg50Ser p.Arg50Ser	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/5	264/561	148/354	50/117		chrX	49323806
chrX:49323807	G G	A A	1	a0009 a0009	1	HG00735.hp1 HG00735.hp1	missense_variant	MODERATE	c.149G>A c.149G>A	p.Arg50His p.Arg50His	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/5	265/561	149/354	50/117		chrX	49323807
chrX:49323836	G G	C C	1	a0013 a0013	1	HG02622.hp1 HG02622.hp1	missense_variant	MODERATE	c.178G>C c.178G>C	p.Glu60Gln p.Glu60Gln	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/5	294/561	178/354	60/117		chrX	49323836
chrX:49326707	G G	C C	3	a0005 a0007 a0014 a0005 a0007 a0014	7	HG00280.hp1 HG01928.hp1 HG02738.hp1 others(4): Show HG00280.hp1 HG01928.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	missense_variant	MODERATE	c.223G>C c.223G>C	p.Asp75His p.Asp75His	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/5	339/561	223/354	75/117		chrX	49326707
chrX:49326726	A A	AC AC	1	a0011 a0011	1	HG01192.hp1 HG01192.hp1	frameshift_variant	HIGH	c.245dupC c.245dupC	p.Gln83fs p.Gln83fs	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/5	362/561	246/354	82/117	INFO_REALIGN_3_PRIME	chrX	49326726
chrX:49329273	G G	A A	3	a0002 a0003 a0014 a0002 a0003 a0014	86	HG00099.hp2 HG00408.hp1 HG00423.hp1 others(83): Show HG00099.hp2 HG00408.hp1 HG00423.hp1 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00639.hp1 HG00735.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01243.hp1 HG01256.hp1 HG01358.hp1 HG01928.hp1 HG01943.hp1 HG02056.hp1 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02148.hp1 HG02293.hp1 HG02293.hp2 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02723.hp2 HG02922.hp1 HG03098.hp1 HG03139.hp1 HG03239.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03704.hp1 HG03710.hp1 HG03942.hp1 NA18522.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp2 NA18947.hp1 NA18948.hp1 NA18950.hp1 NA18951.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp2 NA18969.hp2 NA18970.hp1 NA18974.hp1 NA18979.hp2 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18993.hp2 NA18998.hp1 NA19002.hp2 NA19005.hp1 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19055.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19066.hp1 NA19074.hp1 NA19079.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2	missense_variant&splice_region_variant	MODERATE	c.334G>A c.334G>A	p.Glu112Lys p.Glu112Lys	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	5/5	450/561	334/354	112/117		chrX	49329273
chrX:49329279	C C	A A	1	a0010 a0010	1	HG02148.hp2 HG02148.hp2	missense_variant	MODERATE	c.340C>A c.340C>A	p.Gln114Lys p.Gln114Lys	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	5/5	456/561	340/354	114/117		chrX	49329279

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:49323238	A A	G G	2	a0005c0005 a0006c0006 a0005c0005 a0006c0006	8	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(5): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	synonymous_variant	LOW	c.45A>G c.45A>G	p.Arg15Arg p.Arg15Arg	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	161/561	45/354	15/117			chrX	49323238
chrX:49323244	T T	C C	2	a0007c0007 a0013c0009 a0007c0007 a0013c0009	3	HG00280.hp1 HG02622.hp1 HG02738.hp1 HG00280.hp1 HG02622.hp1 HG02738.hp1	synonymous_variant	LOW	c.51T>C c.51T>C	p.Tyr17Tyr p.Tyr17Tyr	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/5	167/561	51/354	17/117			chrX	49323244

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:49322038	T T	C C	2	a0007c0007t0003 a0013c0009t0005 a0007c0007t0003 a0013c0009t0005	3	HG00280.hp1 HG02622.hp1 HG02738.hp1 HG00280.hp1 HG02622.hp1 HG02738.hp1	5_prime_UTR_variant	MODIFIER	c.-115T>C c.-115T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/5	1156		chrX	49322038
chrX:49322047	C C	CG CG	1	a0002c0002t0006 a0002c0002t0006	1	NA19063.hp1 NA19063.hp1	5_prime_UTR_variant	MODIFIER	c.-104dupG c.-104dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/5	1144	INFO_REALIGN_3_PRIME	chrX	49322047
chrX:49322110	G G	A A	1	a0001c0001t0004 a0001c0001t0004	2	HG01255.hp1 HG03225.hp1 HG01255.hp1 HG03225.hp1	5_prime_UTR_variant	MODIFIER	c.-43G>A c.-43G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/5	1084		chrX	49322110
chrX:49329300	A A	G G	9	a0001c0001t0002 a0001c0001t0004 a0005c0005t0002 others(6): Show a0001c0001t0002 a0001c0001t0004 a0005c0005t0002 a0006c0006t0002 a0007c0007t0003 a0009c0011t0002 a0010c0012t0002 a0011c0013t0002 a0012c0014t0002	95	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(92): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.7A>G c.7A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	5/5	7		chrX	49329300

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:49322151	C C	G G	66	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(63): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0005 a0002c0002t0001g0064 a0003c0003t0001g0005 a0003c0003t0001g0007 a0003c0003t0001g0009 a0003c0003t0001g0016 a0003c0003t0001g0083 a0003c0003t0001g0084 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0088 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0008c0008t0001g0007 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	118	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(115): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG01070.hp2 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 NA20905.hp1	splice_region_variant&intron_variant	LOW	c.-9+7C>G c.-9+7C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322151
chrX:49322168	CG CG	C C	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.-9+29delG c.-9+29delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322168
chrX:49322204	T T	C C	29	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(26): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0002c0002t0001g0064 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	56	HG00280.hp1 HG00408.hp2 HG00423.hp2 others(53): Show HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00735.hp2 HG01070.hp2 HG01071.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01361.hp1 HG01515.hp1 HG01517.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02135.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03492.hp1 HG03654.hp1 HG03669.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18942.hp1 NA18945.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18993.hp1 NA18994.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19056.hp1 NA19058.hp1 NA19068.hp1 NA19074.hp2 NA20905.hp1	intron_variant	MODIFIER	c.-9+60T>C c.-9+60T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322204
chrX:49322223	CCGCTTCC others(20): Show CCGCTTCCTGGTCTGTGGCCTCCGAGGG	C C	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.-9+80_-9+106delCGC others(24): Show c.-9+80_-9+106delCGCTTCCTGGTCTGTGGCCTCCGAGGG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322223
chrX:49322303	C C	T T	1	a0003c0003t0001g0088 a0003c0003t0001g0088	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.-9+159C>T c.-9+159C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322303
chrX:49322361	C C	CG CG	1	a0002c0002t0006g0018 a0002c0002t0006g0018	1	NA19063.hp1 NA19063.hp1	intron_variant	MODIFIER	c.-9+219dupG c.-9+219dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322361
chrX:49322383	T T	C C	9	a0001c0001t0002g0041 a0001c0001t0002g0045 a0005c0005t0002g0011 others(6): Show a0001c0001t0002g0041 a0001c0001t0002g0045 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	13	HG00280.hp1 HG00423.hp2 HG01099.hp1 others(10): Show HG00280.hp1 HG00423.hp2 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18612.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-9+239T>C c.-9+239T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322383
chrX:49322398	TG TG	T T	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.-9+260delG c.-9+260delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322398
chrX:49322426	GA GA	G G	8	a0001c0001t0002g0045 a0005c0005t0002g0011 a0005c0005t0002g0046 others(5): Show a0001c0001t0002g0045 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	12	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(9): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18612.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-9+284delA c.-9+284delA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322426
chrX:49322428	A A	AC AC	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.-9+289dupC c.-9+289dupC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322428
chrX:49322429	C C	T T	8	a0001c0001t0002g0045 a0005c0005t0002g0011 a0005c0005t0002g0046 others(5): Show a0001c0001t0002g0045 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	12	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(9): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18612.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-9+285C>T c.-9+285C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322429
chrX:49322466	T T	C C	8	a0001c0001t0002g0045 a0005c0005t0002g0011 a0005c0005t0002g0046 others(5): Show a0001c0001t0002g0045 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	12	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(9): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18612.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-9+322T>C c.-9+322T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322466
chrX:49322468	C C	T T	1	a0005c0005t0002g0047 a0005c0005t0002g0047	1	NA19058.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-9+324C>T c.-9+324C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322468
chrX:49322471	C C	CG CG	2	a0001c0001t0002g0087 a0011c0013t0002g0065 a0001c0001t0002g0087 a0011c0013t0002g0065	2	HG00642.hp1 HG01192.hp1 HG00642.hp1 HG01192.hp1	intron_variant	MODIFIER	c.-9+332dupG c.-9+332dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322471
chrX:49322483	G G	A A	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-9+339G>A c.-9+339G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322483
chrX:49322515	G G	C C	1	a0001c0001t0002g0048 a0001c0001t0002g0048	1	NA18994.hp1 NA18994.hp1	intron_variant	MODIFIER	c.-9+371G>C c.-9+371G>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322515
chrX:49322520	C C	G G	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-9+376C>G c.-9+376C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322520
chrX:49322528	T T	C C	31	a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0012 others(28): Show a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0045 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0087 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	51	HG00140.hp1 HG00280.hp1 HG00639.hp2 others(48): Show HG00140.hp1 HG00280.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01361.hp1 HG01361.hp2 HG01516.hp2 HG01952.hp1 HG01978.hp1 HG02129.hp1 HG02148.hp2 HG02622.hp1 HG02723.hp1 HG02738.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04115.hp1 NA18612.hp1 NA18941.hp2 NA18942.hp1 NA18946.hp1 NA18953.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18984.hp1 NA18989.hp1 NA18995.hp1 NA19004.hp1 NA19010.hp2 NA19058.hp1 NA19064.hp2 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1	intron_variant	MODIFIER	c.-9+384T>C c.-9+384T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322528
chrX:49322530	AGC AGC	A A	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-9+389_-9+390delGC c.-9+389_-9+390delGC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322530
chrX:49322533	G G	GC GC	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.-9+397dupC c.-9+397dupC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322533
chrX:49322539	C C	A A	1	a0002c0002t0006g0018 a0002c0002t0006g0018	1	NA19063.hp1 NA19063.hp1	intron_variant	MODIFIER	c.-9+395C>A c.-9+395C>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322539
chrX:49322556	C C	T T	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-9+412C>T c.-9+412C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322556
chrX:49322565	T T	C C	55	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(52): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0019 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	99	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(96): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-9+421T>C c.-9+421T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322565
chrX:49322642	C C	CG CG	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.-9+500dupG c.-9+500dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322642
chrX:49322643	G G	A A	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-9+499G>A c.-9+499G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322643
chrX:49322655	CT CT	C C	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-9+513delT c.-9+513delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322655
chrX:49322664	A A	AG AG	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.-8-515dupG c.-8-515dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322664
chrX:49322743	TG TG	T T	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-8-439delG c.-8-439delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322743
chrX:49322786	C C	CT CT	1	a0003c0003t0001g0040 a0003c0003t0001g0040	1	HG02723.hp2 HG02723.hp2	intron_variant	MODIFIER	c.-8-399dupT c.-8-399dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322786
chrX:49322800	C C	CA CA	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-8-385dupA c.-8-385dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322800
chrX:49322832	C C	G G	6	a0001c0001t0002g0078 a0005c0005t0002g0011 a0005c0005t0002g0046 others(3): Show a0001c0001t0002g0078 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0013c0009t0005g0042	10	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(7): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1 NA19088.hp1	intron_variant	MODIFIER	c.-8-354C>G c.-8-354C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322832
chrX:49322846	G G	GT GT	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.-8-340_-8-339insT c.-8-340_-8-339insT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322846
chrX:49322870	C C	G G	2	a0002c0002t0001g0010 a0002c0002t0001g0064 a0002c0002t0001g0010 a0002c0002t0001g0064	3	HG00735.hp2 HG02615.hp1 NA18522.hp1 HG00735.hp2 HG02615.hp1 NA18522.hp1	intron_variant	MODIFIER	c.-8-316C>G c.-8-316C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322870
chrX:49322909	G G	GC GC	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-8-275dupC c.-8-275dupC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49322909
chrX:49322980	T T	C C	7	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(4): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	11	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(8): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-8-206T>C c.-8-206T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49322980
chrX:49323065	TG TG	T T	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-8-118delG c.-8-118delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49323065
chrX:49323075	C C	T T	2	a0006c0006t0002g0006 a0013c0009t0005g0042 a0006c0006t0002g0006 a0013c0009t0005g0042	5	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(2): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG03654.hp1	intron_variant	MODIFIER	c.-8-111C>T c.-8-111C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49323075
chrX:49323109	T T	A A	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0013c0009t0005g0042	9	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(6): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-8-77T>A c.-8-77T>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49323109
chrX:49323142	GC GC	G G	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-8-41delC c.-8-41delC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49323142
chrX:49323172	T T	C C	47	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(44): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	87	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-8-14T>C c.-8-14T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	1/4		chrX	49323172
chrX:49323288	G G	A A	7	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(4): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	11	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(8): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.84+11G>A c.84+11G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323288
chrX:49323299	C C	T T	47	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(44): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	87	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.84+22C>T c.84+22C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323299
chrX:49323333	A A	C C	4	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(1): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006	8	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(5): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.84+56A>C c.84+56A>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323333
chrX:49323337	C C	T T	1	a0003c0003t0001g0086 a0003c0003t0001g0086	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.84+60C>T c.84+60C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323337
chrX:49323340	T T	C C	6	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(3): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044	10	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(7): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.84+63T>C c.84+63T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323340
chrX:49323344	G G	T T	1	a0002c0002t0001g0019 a0002c0002t0001g0019	1	HG02056.hp1 HG02056.hp1	intron_variant	MODIFIER	c.84+67G>T c.84+67G>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323344
chrX:49323363	G G	C C	1	a0003c0003t0001g0083 a0003c0003t0001g0083	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.84+86G>C c.84+86G>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323363
chrX:49323394	T T	G G	6	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(3): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044	10	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(7): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.84+117T>G c.84+117T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323394
chrX:49323425	T T	C C	4	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(1): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006	8	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(5): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.84+148T>C c.84+148T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323425
chrX:49323431	AT AT	A A	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.84+164delT c.84+164delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49323431
chrX:49323432	T T	C C	1	a0001c0001t0002g0051 a0001c0001t0002g0051	1	NA19068.hp1 NA19068.hp1	intron_variant	MODIFIER	c.84+155T>C c.84+155T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323432
chrX:49323475	C C	CT CT	1	a0002c0002t0001g0039 a0002c0002t0001g0039	1	HG00438.hp1 HG00438.hp1	intron_variant	MODIFIER	c.84+201dupT c.84+201dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49323475
chrX:49323482	C C	A A	3	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047	4	NA18942.hp1 NA18953.hp1 NA18984.hp1 others(1): Show NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.84+205C>A c.84+205C>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323482
chrX:49323514	T T	A A	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.85-229T>A c.85-229T>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323514
chrX:49323533	C C	T T	6	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(3): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044	10	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(7): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.85-210C>T c.85-210C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323533
chrX:49323541	T T	C C	3	a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(3): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02738.hp1 HG03654.hp1	intron_variant	MODIFIER	c.85-202T>C c.85-202T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323541
chrX:49323578	T T	TC TC	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.85-162dupC c.85-162dupC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49323578
chrX:49323581	C C	T T	1	a0003c0003t0001g0083 a0003c0003t0001g0083	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.85-162C>T c.85-162C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323581
chrX:49323625	G G	GA GA	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.85-115dupA c.85-115dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49323625
chrX:49323647	G G	T T	3	a0002c0002t0001g0038 a0006c0006t0002g0006 a0013c0009t0005g0042 a0002c0002t0001g0038 a0006c0006t0002g0006 a0013c0009t0005g0042	6	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(3): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG03239.hp1 HG03654.hp1	intron_variant	MODIFIER	c.85-96G>T c.85-96G>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323647
chrX:49323705	A A	AT AT	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.85-38_85-37insT c.85-38_85-37insT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323705
chrX:49323706	CTT CTT	C C	3	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047	4	NA18942.hp1 NA18953.hp1 NA18984.hp1 others(1): Show NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.85-36_85-35delTT c.85-36_85-35delTT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323706
chrX:49323714	T T	C C	7	a0002c0002t0001g0038 a0004c0004t0001g0021 a0005c0005t0002g0011 others(4): Show a0002c0002t0001g0038 a0004c0004t0001g0021 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0013c0009t0005g0042	11	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(8): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02486.hp1 HG02622.hp1 HG03239.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.85-29T>C c.85-29T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	2/4		chrX	49323714
chrX:49323922	GTGTGTGC others(1): Show GTGTGTGCA	G G	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0013c0009t0005g0042	9	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(6): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+66_205+73delCA others(6): Show c.205+66_205+73delCATGTGTG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49323922
chrX:49323930	A A	ATG ATG	2	a0003c0003t0001g0083 a0004c0004t0001g0022 a0003c0003t0001g0083 a0004c0004t0001g0022	2	HG02559.hp2 HG02622.hp2 HG02559.hp2 HG02622.hp2	intron_variant	MODIFIER	c.205+95_205+96dupGT c.205+95_205+96dupGT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49323930
chrX:49323930	A A	ATGTG ATGTG	2	a0003c0003t0001g0009 a0003c0003t0001g0086 a0003c0003t0001g0009 a0003c0003t0001g0086	4	HG01081.hp1 HG02109.hp2 HG03139.hp1 others(1): Show HG01081.hp1 HG02109.hp2 HG03139.hp1 NA19240.hp2	intron_variant	MODIFIER	c.205+93_205+96dupGT others(2): Show c.205+93_205+96dupGTGT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49323930
chrX:49323930	ATG ATG	A A	7	a0001c0001t0002g0004 a0001c0001t0002g0052 a0001c0001t0002g0053 others(4): Show a0001c0001t0002g0004 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0066 a0002c0002t0001g0020 a0003c0003t0001g0037 a0003c0003t0001g0085	12	HG00621.hp1 HG01070.hp2 HG01071.hp2 others(9): Show HG00621.hp1 HG01070.hp2 HG01071.hp2 HG01123.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01978.hp2 HG03486.hp2 NA18969.hp1 NA19062.hp1 NA19240.hp1	intron_variant	MODIFIER	c.205+95_205+96delGT c.205+95_205+96delGT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49323930
chrX:49323930	ATGTG ATGTG	A A	41	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(38): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	76	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(73): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01081.hp2 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01952.hp1 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+93_205+96delGT others(2): Show c.205+93_205+96delGTGT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49323930
chrX:49323930	ATGTGTG ATGTGTG	A A	1	a0001c0001t0002g0077 a0001c0001t0002g0077	1	HG01978.hp1 HG01978.hp1	intron_variant	MODIFIER	c.205+91_205+96delGT others(4): Show c.205+91_205+96delGTGTGT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49323930
chrX:49323930	ATGTGTGT others(9): Show ATGTGTGTGTGTGTGTG	A A	5	a0001c0001t0002g0049 a0002c0002t0001g0038 a0004c0004t0001g0021 others(2): Show a0001c0001t0002g0049 a0002c0002t0001g0038 a0004c0004t0001g0021 a0007c0007t0003g0043 a0007c0007t0003g0044	5	HG00280.hp1 HG02486.hp1 HG02738.hp1 others(2): Show HG00280.hp1 HG02486.hp1 HG02738.hp1 HG03239.hp1 HG04115.hp1	intron_variant	MODIFIER	c.205+81_205+96delGT others(14): Show c.205+81_205+96delGTGTGTGTGTGTGTGT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49323930
chrX:49323939	T T	C C	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0013c0009t0005g0042	9	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(6): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+76T>C c.205+76T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49323939
chrX:49323940	G G	A A	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0013c0009t0005g0042	9	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(6): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+77G>A c.205+77G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49323940
chrX:49323941	T T	C C	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0013c0009t0005g0042	9	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(6): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+78T>C c.205+78T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49323941
chrX:49323947	T T	C C	5	a0001c0001t0002g0049 a0002c0002t0001g0038 a0004c0004t0001g0021 others(2): Show a0001c0001t0002g0049 a0002c0002t0001g0038 a0004c0004t0001g0021 a0007c0007t0003g0043 a0007c0007t0003g0044	5	HG00280.hp1 HG02486.hp1 HG02738.hp1 others(2): Show HG00280.hp1 HG02486.hp1 HG02738.hp1 HG03239.hp1 HG04115.hp1	intron_variant	MODIFIER	c.205+84T>C c.205+84T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49323947
chrX:49323950	G G	GC GC	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.205+87_205+88insC c.205+87_205+88insC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49323950
chrX:49323955	T T	C C	1	a0006c0006t0002g0006 a0006c0006t0002g0006	4	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(1): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1	intron_variant	MODIFIER	c.205+92T>C c.205+92T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49323955
chrX:49323958	GTT GTT	G G	1	a0002c0002t0001g0064 a0002c0002t0001g0064	1	HG00735.hp2 HG00735.hp2	intron_variant	MODIFIER	c.205+96_205+97delTT c.205+96_205+97delTT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49323958
chrX:49323960	T T	G G	2	a0002c0002t0001g0010 a0004c0004t0001g0022 a0002c0002t0001g0010 a0004c0004t0001g0022	3	HG02559.hp2 HG02615.hp1 NA18522.hp1 HG02559.hp2 HG02615.hp1 NA18522.hp1	intron_variant	MODIFIER	c.205+97T>G c.205+97T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49323960
chrX:49324019	TTGAC TTGAC	T T	45	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(42): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0009c0011t0002g0008 a0010c0012t0002g0070 a0012c0014t0002g0072	85	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(82): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+159_205+162del others(4): Show c.205+159_205+162delACTG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324019
chrX:49324022	ACTGG ACTGG	A A	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.205+160_205+163del others(4): Show c.205+160_205+163delCTGG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324022
chrX:49324125	G G	GATTGTGT others(9): Show GATTGTGTGTTATCCAA	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.205+263_205+278dup others(16): Show c.205+263_205+278dupATTGTGTGTTATCCAA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324125
chrX:49324126	A A	G G	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+263A>G c.205+263A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324126
chrX:49324154	G G	C C	2	a0001c0001t0002g0008 a0009c0011t0002g0008 a0001c0001t0002g0008 a0009c0011t0002g0008	3	HG00140.hp1 HG00735.hp1 HG01952.hp1 HG00140.hp1 HG00735.hp1 HG01952.hp1	intron_variant	MODIFIER	c.205+291G>C c.205+291G>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324154
chrX:49324156	T T	TG TG	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.205+294dupG c.205+294dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324156
chrX:49324173	T T	C C	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+310T>C c.205+310T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324173
chrX:49324181	C C	T T	2	a0007c0007t0003g0043 a0007c0007t0003g0044 a0007c0007t0003g0043 a0007c0007t0003g0044	2	HG00280.hp1 HG02738.hp1 HG00280.hp1 HG02738.hp1	intron_variant	MODIFIER	c.205+318C>T c.205+318C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324181
chrX:49324203	T T	C C	47	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(44): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	87	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+340T>C c.205+340T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324203
chrX:49324206	G G	A A	50	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(47): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	90	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(87): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+343G>A c.205+343G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324206
chrX:49324215	T T	G G	3	a0001c0001t0002g0067 a0007c0007t0003g0043 a0007c0007t0003g0044 a0001c0001t0002g0067 a0007c0007t0003g0043 a0007c0007t0003g0044	3	HG00280.hp1 HG02738.hp1 NA19072.hp1 HG00280.hp1 HG02738.hp1 NA19072.hp1	intron_variant	MODIFIER	c.205+352T>G c.205+352T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324215
chrX:49324235	C C	G G	1	a0006c0006t0002g0006 a0006c0006t0002g0006	4	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(1): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1	intron_variant	MODIFIER	c.205+372C>G c.205+372C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324235
chrX:49324254	A A	G G	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+391A>G c.205+391A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324254
chrX:49324259	G G	A A	4	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(1): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006	8	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(5): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+396G>A c.205+396G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324259
chrX:49324260	CT CT	C C	4	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(1): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006	8	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(5): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+400delT c.205+400delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324260
chrX:49324284	T T	A A	1	a0001c0001t0002g0068 a0001c0001t0002g0068	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.205+421T>A c.205+421T>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324284
chrX:49324310	G G	C C	1	a0003c0003t0001g0023 a0003c0003t0001g0023	1	HG02647.hp1 HG02647.hp1	intron_variant	MODIFIER	c.205+447G>C c.205+447G>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324310
chrX:49324384	T T	TA TA	1	a0001c0001t0002g0069 a0001c0001t0002g0069	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.205+522dupA c.205+522dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324384
chrX:49324434	GT GT	G G	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.205+574delT c.205+574delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324434
chrX:49324457	T T	C C	7	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(4): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	11	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(8): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+594T>C c.205+594T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324457
chrX:49324550	A A	C C	47	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(44): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	87	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+687A>C c.205+687A>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324550
chrX:49324555	T T	G G	47	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(44): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	87	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(84): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+692T>G c.205+692T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324555
chrX:49324569	G G	A A	7	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(4): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	11	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(8): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+706G>A c.205+706G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324569
chrX:49324579	T T	C C	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+716T>C c.205+716T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324579
chrX:49324582	A A	AG AG	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.205+721dupG c.205+721dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324582
chrX:49324647	A A	G G	1	a0002c0002t0001g0036 a0002c0002t0001g0036	1	HG02293.hp1 HG02293.hp1	intron_variant	MODIFIER	c.205+784A>G c.205+784A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324647
chrX:49324661	A A	G G	93	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(90): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0001 a0002c0002t0001g0005 a0002c0002t0001g0010 a0002c0002t0001g0017 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0032 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0064 a0002c0002t0006g0018 a0003c0003t0001g0005 a0003c0003t0001g0007 a0003c0003t0001g0009 a0003c0003t0001g0016 a0003c0003t0001g0023 a0003c0003t0001g0026 a0003c0003t0001g0037 a0003c0003t0001g0040 a0003c0003t0001g0083 a0003c0003t0001g0084 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0088 a0004c0004t0001g0001 a0004c0004t0001g0021 a0004c0004t0001g0022 a0004c0004t0001g0031 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0008c0008t0001g0001 a0008c0008t0001g0007 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042 a0014c0010t0001g0001	192	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(189): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.205+798A>G c.205+798A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324661
chrX:49324683	C C	CGG CGG	8	a0001c0001t0002g0082 a0005c0005t0002g0011 a0005c0005t0002g0046 others(5): Show a0001c0001t0002g0082 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	12	HG00099.hp1 HG00280.hp1 HG01099.hp1 others(9): Show HG00099.hp1 HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+822_205+823dup others(2): Show c.205+822_205+823dupGG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324683
chrX:49324828	A A	G G	2	a0007c0007t0003g0043 a0007c0007t0003g0044 a0007c0007t0003g0043 a0007c0007t0003g0044	2	HG00280.hp1 HG02738.hp1 HG00280.hp1 HG02738.hp1	intron_variant	MODIFIER	c.205+965A>G c.205+965A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324828
chrX:49324852	TA TA	T T	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.205+991delA c.205+991delA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324852
chrX:49324856	AT AT	A A	2	a0007c0007t0003g0043 a0007c0007t0003g0044 a0007c0007t0003g0043 a0007c0007t0003g0044	2	HG00280.hp1 HG02738.hp1 HG00280.hp1 HG02738.hp1	intron_variant	MODIFIER	c.205+997delT c.205+997delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324856
chrX:49324859	T T	G G	4	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(1): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006	8	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(5): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+996T>G c.205+996T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324859
chrX:49324861	C C	T T	4	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(1): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006	8	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(5): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+998C>T c.205+998C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324861
chrX:49324878	G G	A A	7	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(4): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	11	HG00280.hp1 HG01099.hp1 HG01106.hp1 others(8): Show HG00280.hp1 HG01099.hp1 HG01106.hp1 HG01361.hp1 HG02622.hp1 HG02738.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+1015G>A c.205+1015G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324878
chrX:49324883	G G	A A	4	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(1): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006	8	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(5): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+1020G>A c.205+1020G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324883
chrX:49324911	G G	A A	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+1048G>A c.205+1048G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324911
chrX:49324937	G G	A A	1	a0001c0001t0002g0079 a0001c0001t0002g0079	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.205+1074G>A c.205+1074G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324937
chrX:49324965	G G	T T	1	a0001c0001t0002g0076 a0001c0001t0002g0076	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.205+1102G>T c.205+1102G>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324965
chrX:49324986	AG AG	A A	1	a0002c0002t0001g0017 a0002c0002t0001g0017	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.205+1126delG c.205+1126delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49324986
chrX:49324987	G G	A A	2	a0001c0001t0002g0077 a0010c0012t0002g0070 a0001c0001t0002g0077 a0010c0012t0002g0070	2	HG01978.hp1 HG02148.hp2 HG01978.hp1 HG02148.hp2	intron_variant	MODIFIER	c.205+1124G>A c.205+1124G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49324987
chrX:49325050	G G	T T	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+1187G>T c.205+1187G>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325050
chrX:49325134	T T	A A	1	a0001c0001t0002g0054 a0001c0001t0002g0054	1	HG02135.hp1 HG02135.hp1	intron_variant	MODIFIER	c.205+1271T>A c.205+1271T>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325134
chrX:49325169	C C	T T	6	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(3): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	7	HG00280.hp1 HG02622.hp1 HG02738.hp1 others(4): Show HG00280.hp1 HG02622.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+1306C>T c.205+1306C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325169
chrX:49325181	C C	A A	6	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(3): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	7	HG00280.hp1 HG02622.hp1 HG02738.hp1 others(4): Show HG00280.hp1 HG02622.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+1318C>A c.205+1318C>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325181
chrX:49325188	GAATA GAATA	G G	3	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047	4	NA18942.hp1 NA18953.hp1 NA18984.hp1 others(1): Show NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+1338_205+1341d others(6): Show c.205+1338_205+1341delAATA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325188
chrX:49325203	T T	C C	3	a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	3	HG00280.hp1 HG02622.hp1 HG02738.hp1 HG00280.hp1 HG02622.hp1 HG02738.hp1	intron_variant	MODIFIER	c.205+1340T>C c.205+1340T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325203
chrX:49325227	G G	A A	8	a0001c0001t0002g0080 a0001c0001t0002g0082 a0005c0005t0002g0011 others(5): Show a0001c0001t0002g0080 a0001c0001t0002g0082 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	9	HG00099.hp1 HG00280.hp1 HG02622.hp1 others(6): Show HG00099.hp1 HG00280.hp1 HG02622.hp1 HG02738.hp1 HG03239.hp2 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.205+1364G>A c.205+1364G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325227
chrX:49325245	A A	AG AG	2	a0002c0002t0001g0035 a0011c0013t0002g0065 a0002c0002t0001g0035 a0011c0013t0002g0065	2	HG01192.hp1 NA18955.hp1 HG01192.hp1 NA18955.hp1	intron_variant	MODIFIER	c.205+1384dupG c.205+1384dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325245
chrX:49325335	A A	T T	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1355A>T c.206-1355A>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325335
chrX:49325416	A A	G G	1	a0002c0002t0001g0034 a0002c0002t0001g0034	1	NA19079.hp1 NA19079.hp1	intron_variant	MODIFIER	c.206-1274A>G c.206-1274A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325416
chrX:49325421	CT CT	C C	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1265delT c.206-1265delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325421
chrX:49325425	T T	TA TA	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.206-1262dupA c.206-1262dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325425
chrX:49325457	G G	A A	6	a0001c0001t0002g0067 a0005c0005t0002g0011 a0005c0005t0002g0046 others(3): Show a0001c0001t0002g0067 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	7	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(4): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1233G>A c.206-1233G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325457
chrX:49325501	CTGTTCAT others(14): Show CTGTTCATCTGGATTCACCAAT	C C	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1184_206-1164d others(23): Show c.206-1184_206-1164delCATCTGGATTCACCAATTGTT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325501
chrX:49325528	A A	G G	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-1162A>G c.206-1162A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325528
chrX:49325536	C C	T T	1	a0001c0001t0002g0066 a0001c0001t0002g0066	1	HG01516.hp2 HG01516.hp2	intron_variant	MODIFIER	c.206-1154C>T c.206-1154C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325536
chrX:49325544	C C	A A	7	a0001c0001t0002g0071 a0001c0001t0002g0076 a0005c0005t0002g0011 others(4): Show a0001c0001t0002g0071 a0001c0001t0002g0076 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	8	HG00280.hp1 HG02723.hp1 HG02738.hp1 others(5): Show HG00280.hp1 HG02723.hp1 HG02738.hp1 HG03516.hp2 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-1146C>A c.206-1146C>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325544
chrX:49325545	A A	G G	8	a0001c0001t0002g0067 a0001c0001t0002g0071 a0001c0001t0002g0076 others(5): Show a0001c0001t0002g0067 a0001c0001t0002g0071 a0001c0001t0002g0076 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	9	HG00280.hp1 HG02723.hp1 HG02738.hp1 others(6): Show HG00280.hp1 HG02723.hp1 HG02738.hp1 HG03516.hp2 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1145A>G c.206-1145A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325545
chrX:49325559	TC TC	T T	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1128delC c.206-1128delC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325559
chrX:49325567	T T	TC TC	1	a0002c0002t0001g0035 a0002c0002t0001g0035	1	NA18955.hp1 NA18955.hp1	intron_variant	MODIFIER	c.206-1122dupC c.206-1122dupC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325567
chrX:49325591	T T	TCA TCA	3	a0003c0003t0001g0007 a0003c0003t0001g0084 a0008c0008t0001g0007 a0003c0003t0001g0007 a0003c0003t0001g0084 a0008c0008t0001g0007	5	HG02109.hp1 HG02922.hp1 HG02922.hp2 others(2): Show HG02109.hp1 HG02922.hp1 HG02922.hp2 HG03098.hp1 HG03516.hp1	intron_variant	MODIFIER	c.206-1080_206-1079d others(4): Show c.206-1080_206-1079dupCA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325591
chrX:49325605	A A	T T	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-1085A>T c.206-1085A>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325605
chrX:49325610	C C	CA CA	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.206-1079dupA c.206-1079dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325610
chrX:49325612	T T	C C	8	a0001c0001t0002g0067 a0001c0001t0002g0080 a0005c0005t0002g0011 others(5): Show a0001c0001t0002g0067 a0001c0001t0002g0080 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044 a0012c0014t0002g0072	9	HG00280.hp1 HG02738.hp1 HG03239.hp2 others(6): Show HG00280.hp1 HG02738.hp1 HG03239.hp2 NA18942.hp1 NA18953.hp1 NA18957.hp2 NA18984.hp1 NA19058.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1078T>C c.206-1078T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325612
chrX:49325614	C C	CGGATATA others(3): Show CGGATATATGT	46	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(43): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0006c0006t0002g0006 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0013c0009t0005g0042	89	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(86): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.206-1076_206-1075i others(12): Show c.206-1076_206-1075insGGATATATGT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325614
chrX:49325614	C C	T T	2	a0001c0001t0002g0080 a0012c0014t0002g0072 a0001c0001t0002g0080 a0012c0014t0002g0072	2	HG03239.hp2 NA18957.hp2 HG03239.hp2 NA18957.hp2	intron_variant	MODIFIER	c.206-1076C>T c.206-1076C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325614
chrX:49325615	A A	ACACATAC others(11): Show ACACATACGGATATATGTT	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1075_206-1074i others(20): Show c.206-1075_206-1074insCACATACGGATATATGTT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325615
chrX:49325615	A A	ACGGATAT others(5): Show ACGGATATATGTT	2	a0001c0001t0002g0080 a0012c0014t0002g0072 a0001c0001t0002g0080 a0012c0014t0002g0072	2	HG03239.hp2 NA18957.hp2 HG03239.hp2 NA18957.hp2	intron_variant	MODIFIER	c.206-1075_206-1074i others(14): Show c.206-1075_206-1074insCGGATATATGTT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325615
chrX:49325615	A A	ATACGGAT others(7): Show ATACGGATATATGTT	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-1072_206-1071i others(16): Show c.206-1072_206-1071insGGATATATGTTTAC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325615
chrX:49325615	A A	T T	46	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(43): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0006c0006t0002g0006 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0013c0009t0005g0042	89	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(86): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.206-1075A>T c.206-1075A>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325615
chrX:49325623	AT AT	A A	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1065delT c.206-1065delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325623
chrX:49325630	C C	G G	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.206-1060C>G c.206-1060C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325630
chrX:49325656	T T	G G	7	a0001c0001t0002g0081 a0003c0003t0001g0026 a0005c0005t0002g0011 others(4): Show a0001c0001t0002g0081 a0003c0003t0001g0026 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	8	HG00280.hp1 HG01070.hp1 HG02451.hp1 others(5): Show HG00280.hp1 HG01070.hp1 HG02451.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-1034T>G c.206-1034T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325656
chrX:49325684	A A	AG AG	1	a0002c0002t0001g0035 a0002c0002t0001g0035	1	NA18955.hp1 NA18955.hp1	intron_variant	MODIFIER	c.206-1003dupG c.206-1003dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325684
chrX:49325684	A A	C C	48	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(45): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0006c0006t0002g0006 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	91	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(88): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.206-1006A>C c.206-1006A>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325684
chrX:49325741	A A	G G	1	a0003c0003t0001g0040 a0003c0003t0001g0040	1	HG02723.hp2 HG02723.hp2	intron_variant	MODIFIER	c.206-949A>G c.206-949A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325741
chrX:49325746	G G	A A	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-944G>A c.206-944G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325746
chrX:49325823	GAAA GAAA	G G	1	a0001c0001t0002g0063 a0001c0001t0002g0063	1	NA18945.hp1 NA18945.hp1	intron_variant	MODIFIER	c.206-865_206-863del others(3): Show c.206-865_206-863delAAA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325823
chrX:49325839	CT CT	C C	92	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(89): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0001 a0002c0002t0001g0005 a0002c0002t0001g0010 a0002c0002t0001g0017 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0032 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0064 a0002c0002t0006g0018 a0003c0003t0001g0005 a0003c0003t0001g0007 a0003c0003t0001g0009 a0003c0003t0001g0016 a0003c0003t0001g0023 a0003c0003t0001g0026 a0003c0003t0001g0037 a0003c0003t0001g0040 a0003c0003t0001g0083 a0003c0003t0001g0084 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0088 a0004c0004t0001g0001 a0004c0004t0001g0021 a0004c0004t0001g0022 a0004c0004t0001g0024 a0004c0004t0001g0031 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0008c0008t0001g0001 a0008c0008t0001g0007 a0009c0011t0002g0008 a0010c0012t0002g0070 a0012c0014t0002g0072 a0013c0009t0005g0042 a0014c0010t0001g0001	191	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(188): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02258.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.206-840delT c.206-840delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325839
chrX:49325856	TG TG	T T	94	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(91): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0001 a0002c0002t0001g0005 a0002c0002t0001g0010 a0002c0002t0001g0017 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0032 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0064 a0002c0002t0006g0018 a0003c0003t0001g0005 a0003c0003t0001g0007 a0003c0003t0001g0009 a0003c0003t0001g0016 a0003c0003t0001g0023 a0003c0003t0001g0026 a0003c0003t0001g0037 a0003c0003t0001g0040 a0003c0003t0001g0083 a0003c0003t0001g0084 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0088 a0004c0004t0001g0001 a0004c0004t0001g0021 a0004c0004t0001g0022 a0004c0004t0001g0024 a0004c0004t0001g0031 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0008c0008t0001g0001 a0008c0008t0001g0007 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042 a0014c0010t0001g0001	193	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(190): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02258.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.206-833delG c.206-833delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325856
chrX:49325859	GA GA	G G	94	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(91): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0001 a0002c0002t0001g0005 a0002c0002t0001g0010 a0002c0002t0001g0017 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0032 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0064 a0002c0002t0006g0018 a0003c0003t0001g0005 a0003c0003t0001g0007 a0003c0003t0001g0009 a0003c0003t0001g0016 a0003c0003t0001g0023 a0003c0003t0001g0026 a0003c0003t0001g0037 a0003c0003t0001g0040 a0003c0003t0001g0083 a0003c0003t0001g0084 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0088 a0004c0004t0001g0001 a0004c0004t0001g0021 a0004c0004t0001g0022 a0004c0004t0001g0024 a0004c0004t0001g0031 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0008c0008t0001g0001 a0008c0008t0001g0007 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042 a0014c0010t0001g0001	193	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(190): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02258.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.206-829delA c.206-829delA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325859
chrX:49325889	T T	G G	2	a0001c0001t0002g0012 a0001c0001t0002g0081 a0001c0001t0002g0012 a0001c0001t0002g0081	3	HG02451.hp1 NA18959.hp1 NA18964.hp1 HG02451.hp1 NA18959.hp1 NA18964.hp1	intron_variant	MODIFIER	c.206-801T>G c.206-801T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325889
chrX:49325894	T T	G G	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-796T>G c.206-796T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325894
chrX:49325896	C C	CAGT CAGT	1	a0002c0002t0001g0035 a0002c0002t0001g0035	1	NA18955.hp1 NA18955.hp1	intron_variant	MODIFIER	c.206-790_206-788dup others(3): Show c.206-790_206-788dupAGT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49325896
chrX:49325925	C C	T T	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-765C>T c.206-765C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325925
chrX:49325959	A A	C C	1	a0003c0003t0001g0084 a0003c0003t0001g0084	1	HG02922.hp1 HG02922.hp1	intron_variant	MODIFIER	c.206-731A>C c.206-731A>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325959
chrX:49325990	G G	A A	1	a0001c0001t0002g0055 a0001c0001t0002g0055	1	HG00438.hp2 HG00438.hp2	intron_variant	MODIFIER	c.206-700G>A c.206-700G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49325990
chrX:49326001	G G	T T	7	a0001c0001t0002g0014 a0001c0001t0002g0075 a0005c0005t0002g0011 others(4): Show a0001c0001t0002g0014 a0001c0001t0002g0075 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	9	HG00280.hp1 HG02129.hp1 HG02738.hp1 others(6): Show HG00280.hp1 HG02129.hp1 HG02738.hp1 NA18941.hp2 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA18995.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-689G>T c.206-689G>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326001
chrX:49326133	C C	G G	2	a0007c0007t0003g0043 a0007c0007t0003g0044 a0007c0007t0003g0043 a0007c0007t0003g0044	2	HG00280.hp1 HG02738.hp1 HG00280.hp1 HG02738.hp1	intron_variant	MODIFIER	c.206-557C>G c.206-557C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326133
chrX:49326247	GT GT	G G	1	a0001c0001t0002g0056 a0001c0001t0002g0056	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.206-441delT c.206-441delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49326247
chrX:49326253	T T	C C	1	a0003c0003t0001g0026 a0003c0003t0001g0026	1	HG01070.hp1 HG01070.hp1	intron_variant	MODIFIER	c.206-437T>C c.206-437T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326253
chrX:49326268	C C	T T	2	a0007c0007t0003g0043 a0007c0007t0003g0044 a0007c0007t0003g0043 a0007c0007t0003g0044	2	HG00280.hp1 HG02738.hp1 HG00280.hp1 HG02738.hp1	intron_variant	MODIFIER	c.206-422C>T c.206-422C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326268
chrX:49326302	T T	G G	3	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047	4	NA18942.hp1 NA18953.hp1 NA18984.hp1 others(1): Show NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-388T>G c.206-388T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326302
chrX:49326408	C C	T T	3	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047	4	NA18942.hp1 NA18953.hp1 NA18984.hp1 others(1): Show NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-282C>T c.206-282C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326408
chrX:49326421	CAGAAGT CAGAAGT	C C	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.206-264_206-259del others(6): Show c.206-264_206-259delGTAGAA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49326421
chrX:49326489	A A	G G	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-201A>G c.206-201A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326489
chrX:49326513	G G	GT GT	1	a0002c0002t0001g0035 a0002c0002t0001g0035	1	NA18955.hp1 NA18955.hp1	intron_variant	MODIFIER	c.206-173dupT c.206-173dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49326513
chrX:49326584	T T	C C	9	a0002c0002t0001g0027 a0003c0003t0001g0009 a0003c0003t0001g0083 others(6): Show a0002c0002t0001g0027 a0003c0003t0001g0009 a0003c0003t0001g0083 a0003c0003t0001g0086 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	12	HG00280.hp1 HG01081.hp1 HG02109.hp2 others(9): Show HG00280.hp1 HG01081.hp1 HG02109.hp2 HG02148.hp1 HG02622.hp2 HG02738.hp1 HG03139.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1 NA19240.hp2	intron_variant	MODIFIER	c.206-106T>C c.206-106T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326584
chrX:49326620	G G	A A	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-70G>A c.206-70G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326620
chrX:49326628	T T	C C	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-62T>C c.206-62T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326628
chrX:49326643	G G	A A	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.206-47G>A c.206-47G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326643
chrX:49326644	C C	T T	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-46C>T c.206-46C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326644
chrX:49326645	G G	T T	6	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(3): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	7	HG00280.hp1 HG02622.hp1 HG02738.hp1 others(4): Show HG00280.hp1 HG02622.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.206-45G>T c.206-45G>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326645
chrX:49326649	T T	A A	1	a0002c0002t0001g0028 a0002c0002t0001g0028	1	NA18974.hp1 NA18974.hp1	intron_variant	MODIFIER	c.206-41T>A c.206-41T>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4		chrX	49326649
chrX:49326650	G G	GT GT	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.206-36dupT c.206-36dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49326650
chrX:49326674	A A	AT AT	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.206-10dupT c.206-10dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49326674
chrX:49326877	G G	C C	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.331+62G>C c.331+62G>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49326877
chrX:49326899	G G	GA GA	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.331+85dupA c.331+85dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49326899
chrX:49326901	GTCTCGC GTCTCGC	G G	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+90_331+95delCG others(4): Show c.331+90_331+95delCGCTCT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49326901
chrX:49326905	C C	T T	2	a0001c0001t0002g0004 a0001c0001t0002g0053 a0001c0001t0002g0004 a0001c0001t0002g0053	7	HG01070.hp2 HG01071.hp2 HG01123.hp1 others(4): Show HG01070.hp2 HG01071.hp2 HG01123.hp1 HG01515.hp1 HG01517.hp1 HG01978.hp2 NA18969.hp1	intron_variant	MODIFIER	c.331+90C>T c.331+90C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49326905
chrX:49326937	C C	G G	48	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(45): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0006c0006t0002g0006 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	91	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(88): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331+122C>G c.331+122C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49326937
chrX:49327017	G G	A A	1	a0006c0006t0002g0006 a0006c0006t0002g0006	4	HG01099.hp1 HG01106.hp1 HG01361.hp1 others(1): Show HG01099.hp1 HG01106.hp1 HG01361.hp1 HG03654.hp1	intron_variant	MODIFIER	c.331+202G>A c.331+202G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327017
chrX:49327019	C C	G G	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.331+204C>G c.331+204C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327019
chrX:49327020	G G	A A	5	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(2): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	6	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(3): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.331+205G>A c.331+205G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327020
chrX:49327021	G G	T T	6	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(3): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	7	HG00280.hp1 HG02622.hp1 HG02738.hp1 others(4): Show HG00280.hp1 HG02622.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.331+206G>T c.331+206G>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327021
chrX:49327081	C C	T T	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.331+266C>T c.331+266C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327081
chrX:49327095	A A	G G	6	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 others(3): Show a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	7	HG00280.hp1 HG02622.hp1 HG02738.hp1 others(4): Show HG00280.hp1 HG02622.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.331+280A>G c.331+280A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327095
chrX:49327104	A A	AC AC	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.331+291dupC c.331+291dupC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327104
chrX:49327127	G G	GA GA	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+313dupA c.331+313dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327127
chrX:49327143	G G	A A	1	a0002c0002t0001g0029 a0002c0002t0001g0029	1	HG01168.hp2 HG01168.hp2	intron_variant	MODIFIER	c.331+328G>A c.331+328G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327143
chrX:49327218	T T	C C	3	a0001c0001t0002g0013 a0001c0001t0002g0067 a0007c0007t0003g0043 a0001c0001t0002g0013 a0001c0001t0002g0067 a0007c0007t0003g0043	4	HG00280.hp1 NA19010.hp2 NA19072.hp1 others(1): Show HG00280.hp1 NA19010.hp2 NA19072.hp1 NA19086.hp1	intron_variant	MODIFIER	c.331+403T>C c.331+403T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327218
chrX:49327230	C C	G G	9	a0001c0001t0002g0013 a0001c0001t0002g0067 a0001c0001t0002g0081 others(6): Show a0001c0001t0002g0013 a0001c0001t0002g0067 a0001c0001t0002g0081 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044 a0013c0009t0005g0042	11	HG00280.hp1 HG02451.hp1 HG02622.hp1 others(8): Show HG00280.hp1 HG02451.hp1 HG02622.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19010.hp2 NA19058.hp1 NA19072.hp1 NA19086.hp1	intron_variant	MODIFIER	c.331+415C>G c.331+415C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327230
chrX:49327253	A A	C C	2	a0001c0001t0002g0013 a0001c0001t0002g0067 a0001c0001t0002g0013 a0001c0001t0002g0067	3	NA19010.hp2 NA19072.hp1 NA19086.hp1 NA19010.hp2 NA19072.hp1 NA19086.hp1	intron_variant	MODIFIER	c.331+438A>C c.331+438A>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327253
chrX:49327276	C C	T T	2	a0003c0003t0001g0026 a0003c0003t0001g0040 a0003c0003t0001g0026 a0003c0003t0001g0040	2	HG01070.hp1 HG02723.hp2 HG01070.hp1 HG02723.hp2	intron_variant	MODIFIER	c.331+461C>T c.331+461C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327276
chrX:49327278	A A	G G	7	a0001c0001t0002g0013 a0001c0001t0002g0067 a0005c0005t0002g0011 others(4): Show a0001c0001t0002g0013 a0001c0001t0002g0067 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0007c0007t0003g0043 a0007c0007t0003g0044	9	HG00280.hp1 HG02738.hp1 NA18942.hp1 others(6): Show HG00280.hp1 HG02738.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19010.hp2 NA19058.hp1 NA19072.hp1 NA19086.hp1	intron_variant	MODIFIER	c.331+463A>G c.331+463A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327278
chrX:49327307	C C	G G	7	a0001c0001t0002g0013 a0001c0001t0002g0061 a0001c0001t0002g0067 others(4): Show a0001c0001t0002g0013 a0001c0001t0002g0061 a0001c0001t0002g0067 a0001c0001t0002g0074 a0002c0002t0001g0033 a0007c0007t0003g0043 a0007c0007t0003g0044	8	HG00280.hp1 HG02738.hp1 HG03490.hp1 others(5): Show HG00280.hp1 HG02738.hp1 HG03490.hp1 HG04228.hp1 NA19009.hp1 NA19010.hp2 NA19072.hp1 NA19086.hp1	intron_variant	MODIFIER	c.331+492C>G c.331+492C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327307
chrX:49327313	C C	CA CA	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+501dupA c.331+501dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327313
chrX:49327333	A A	AG AG	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+519dupG c.331+519dupG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327333
chrX:49327449	G G	A A	1	a0001c0001t0002g0054 a0001c0001t0002g0054	1	HG02135.hp1 HG02135.hp1	intron_variant	MODIFIER	c.331+634G>A c.331+634G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327449
chrX:49327464	C C	T T	1	a0001c0001t0002g0060 a0001c0001t0002g0060	1	HG03834.hp2 HG03834.hp2	intron_variant	MODIFIER	c.331+649C>T c.331+649C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327464
chrX:49327499	AT AT	A A	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+686delT c.331+686delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327499
chrX:49327570	C C	T T	1	a0001c0001t0002g0059 a0001c0001t0002g0059	1	HG03669.hp2 HG03669.hp2	intron_variant	MODIFIER	c.331+755C>T c.331+755C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327570
chrX:49327655	A A	AT AT	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.331+841dupT c.331+841dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327655
chrX:49327731	T T	G G	37	a0002c0002t0001g0001 a0002c0002t0001g0005 a0002c0002t0001g0010 others(34): Show a0002c0002t0001g0001 a0002c0002t0001g0005 a0002c0002t0001g0010 a0002c0002t0001g0017 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0032 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0064 a0002c0002t0006g0018 a0003c0003t0001g0005 a0003c0003t0001g0007 a0003c0003t0001g0009 a0003c0003t0001g0023 a0003c0003t0001g0026 a0003c0003t0001g0037 a0003c0003t0001g0040 a0003c0003t0001g0083 a0003c0003t0001g0084 a0003c0003t0001g0086 a0003c0003t0001g0088 a0004c0004t0001g0001 a0004c0004t0001g0021 a0004c0004t0001g0022 a0004c0004t0001g0031 a0008c0008t0001g0001 a0008c0008t0001g0007 a0014c0010t0001g0001	91	HG00099.hp2 HG00408.hp1 HG00423.hp1 others(88): Show HG00099.hp2 HG00408.hp1 HG00423.hp1 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00639.hp1 HG00735.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01256.hp1 HG01358.hp1 HG01516.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG02056.hp1 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02148.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02723.hp2 HG02922.hp1 HG02922.hp2 HG03098.hp1 HG03139.hp1 HG03239.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03942.hp1 NA18522.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp2 NA18947.hp1 NA18948.hp1 NA18950.hp1 NA18951.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp2 NA18969.hp2 NA18970.hp1 NA18974.hp1 NA18979.hp2 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18993.hp2 NA18998.hp1 NA19002.hp2 NA19005.hp1 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19055.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19066.hp1 NA19074.hp1 NA19079.hp1 NA19091.hp1 NA19240.hp2	intron_variant	MODIFIER	c.331+916T>G c.331+916T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327731
chrX:49327738	G G	GT GT	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+924dupT c.331+924dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327738
chrX:49327789	C C	T T	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+974C>T c.331+974C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327789
chrX:49327832	GGTTT GGTTT	G G	46	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(43): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0071 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0006c0006t0002g0006 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	89	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(86): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19086.hp1 NA19088.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331+1031_331+1034d others(6): Show c.331+1031_331+1034delTTTG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327832
chrX:49327965	G G	GA GA	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+1152dupA c.331+1152dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327965
chrX:49327966	A A	G G	3	a0001c0001t0002g0075 a0005c0005t0002g0011 a0005c0005t0002g0047 a0001c0001t0002g0075 a0005c0005t0002g0011 a0005c0005t0002g0047	4	NA18942.hp1 NA18953.hp1 NA18995.hp1 others(1): Show NA18942.hp1 NA18953.hp1 NA18995.hp1 NA19058.hp1	intron_variant	MODIFIER	c.331+1151A>G c.331+1151A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49327966
chrX:49327988	G G	GC GC	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.331+1175dupC c.331+1175dupC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327988
chrX:49327998	A A	AT AT	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.331+1190dupT c.331+1190dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49327998
chrX:49328093	T T	C C	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0019 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-1178T>C c.332-1178T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328093
chrX:49328093	T T	TTTTA TTTTA	1	a0003c0003t0001g0037 a0003c0003t0001g0037	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.332-1155_332-1152d others(6): Show c.332-1155_332-1152dupTATT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328093
chrX:49328093	T T	TTTTATTT others(5): Show TTTTATTTATTTA	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.332-1163_332-1152d others(14): Show c.332-1163_332-1152dupTATTTATTTATT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328093
chrX:49328094	TTTATTTA others(4): Show TTTATTTATTTA	T T	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0019 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-1174_332-1164d others(13): Show c.332-1174_332-1164delATTTATTTATT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328094
chrX:49328117	ATTG ATTG	A A	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0019 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-1151_332-1149d others(5): Show c.332-1151_332-1149delGTT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328117
chrX:49328126	CTTTAAG CTTTAAG	C C	1	a0002c0002t0001g0019 a0002c0002t0001g0019	1	HG02056.hp1 HG02056.hp1	intron_variant	MODIFIER	c.332-1141_332-1136d others(8): Show c.332-1141_332-1136delAAGTTT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328126
chrX:49328133	T T	A A	1	a0002c0002t0001g0030 a0002c0002t0001g0030	1	HG02602.hp1 HG02602.hp1	intron_variant	MODIFIER	c.332-1138T>A c.332-1138T>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328133
chrX:49328173	T T	C C	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0019 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-1098T>C c.332-1098T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328173
chrX:49328187	A A	AT AT	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.332-1083dupT c.332-1083dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328187
chrX:49328193	T T	G G	55	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(52): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0019 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	99	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(96): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-1078T>G c.332-1078T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328193
chrX:49328197	A A	G G	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0019 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-1074A>G c.332-1074A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328197
chrX:49328250	C C	T T	1	a0005c0005t0002g0046 a0005c0005t0002g0046	1	NA18984.hp1 NA18984.hp1	intron_variant	MODIFIER	c.332-1021C>T c.332-1021C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328250
chrX:49328251	T T	TC TC	2	a0002c0002t0001g0019 a0007c0007t0003g0044 a0002c0002t0001g0019 a0007c0007t0003g0044	2	HG02056.hp1 HG02738.hp1 HG02056.hp1 HG02738.hp1	intron_variant	MODIFIER	c.332-1014dupC c.332-1014dupC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328251
chrX:49328258	T T	TCTC TCTC	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.332-1012_332-1011i others(5): Show c.332-1012_332-1011insTCC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328258
chrX:49328274	C C	A A	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.332-997C>A c.332-997C>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328274
chrX:49328277	TC TC	T T	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.332-990delC c.332-990delC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328277
chrX:49328294	T T	A A	1	a0001c0001t0002g0045 a0001c0001t0002g0045	1	NA18612.hp1 NA18612.hp1	intron_variant	MODIFIER	c.332-977T>A c.332-977T>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328294
chrX:49328306	G G	C C	3	a0003c0003t0001g0009 a0003c0003t0001g0083 a0003c0003t0001g0086 a0003c0003t0001g0009 a0003c0003t0001g0083 a0003c0003t0001g0086	5	HG01081.hp1 HG02109.hp2 HG02622.hp2 others(2): Show HG01081.hp1 HG02109.hp2 HG02622.hp2 HG03139.hp1 NA19240.hp2	intron_variant	MODIFIER	c.332-965G>C c.332-965G>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328306
chrX:49328340	G G	A A	1	a0013c0009t0005g0042 a0013c0009t0005g0042	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.332-931G>A c.332-931G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328340
chrX:49328362	GT GT	G G	2	a0001c0001t0002g0062 a0001c0001t0002g0069 a0001c0001t0002g0062 a0001c0001t0002g0069	2	NA18956.hp1 NA19089.hp1 NA18956.hp1 NA19089.hp1	intron_variant	MODIFIER	c.332-903delT c.332-903delT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328362
chrX:49328422	G G	A A	53	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(50): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	97	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(94): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-849G>A c.332-849G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328422
chrX:49328439	A A	T T	2	a0007c0007t0003g0043 a0007c0007t0003g0044 a0007c0007t0003g0043 a0007c0007t0003g0044	2	HG00280.hp1 HG02738.hp1 HG00280.hp1 HG02738.hp1	intron_variant	MODIFIER	c.332-832A>T c.332-832A>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328439
chrX:49328441	C C	CA CA	1	a0002c0002t0001g0020 a0002c0002t0001g0020	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.332-829dupA c.332-829dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328441
chrX:49328442	A A	AT AT	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.332-823dupT c.332-823dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328442
chrX:49328469	G G	A A	2	a0007c0007t0003g0043 a0007c0007t0003g0044 a0007c0007t0003g0043 a0007c0007t0003g0044	2	HG00280.hp1 HG02738.hp1 HG00280.hp1 HG02738.hp1	intron_variant	MODIFIER	c.332-802G>A c.332-802G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328469
chrX:49328472	G G	T T	1	a0002c0002t0001g0032 a0002c0002t0001g0032	1	NA19005.hp1 NA19005.hp1	intron_variant	MODIFIER	c.332-799G>T c.332-799G>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328472
chrX:49328481	C C	G G	1	a0005c0005t0002g0046 a0005c0005t0002g0046	1	NA18984.hp1 NA18984.hp1	intron_variant	MODIFIER	c.332-790C>G c.332-790C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328481
chrX:49328481	C C	T T	2	a0002c0002t0001g0019 a0002c0002t0001g0038 a0002c0002t0001g0019 a0002c0002t0001g0038	2	HG02056.hp1 HG03239.hp1 HG02056.hp1 HG03239.hp1	intron_variant	MODIFIER	c.332-790C>T c.332-790C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328481
chrX:49328505	C C	T T	1	a0003c0003t0001g0037 a0003c0003t0001g0037	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.332-766C>T c.332-766C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328505
chrX:49328519	TG TG	T T	1	a0005c0005t0002g0046 a0005c0005t0002g0046	1	NA18984.hp1 NA18984.hp1	intron_variant	MODIFIER	c.332-749delG c.332-749delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328519
chrX:49328577	T T	C C	4	a0001c0001t0002g0054 a0001c0001t0002g0061 a0007c0007t0003g0043 others(1): Show a0001c0001t0002g0054 a0001c0001t0002g0061 a0007c0007t0003g0043 a0007c0007t0003g0044	4	HG00280.hp1 HG02135.hp1 HG02738.hp1 others(1): Show HG00280.hp1 HG02135.hp1 HG02738.hp1 HG04228.hp1	intron_variant	MODIFIER	c.332-694T>C c.332-694T>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328577
chrX:49328624	G G	GC GC	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.332-647_332-646ins others(1): Show c.332-647_332-646insC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328624
chrX:49328628	TG TG	T T	1	a0005c0005t0002g0046 a0005c0005t0002g0046	1	NA18984.hp1 NA18984.hp1	intron_variant	MODIFIER	c.332-640delG c.332-640delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328628
chrX:49328698	T T	TA TA	2	a0001c0001t0002g0062 a0002c0002t0001g0020 a0001c0001t0002g0062 a0002c0002t0001g0020	2	NA18956.hp1 NA19062.hp1 NA18956.hp1 NA19062.hp1	intron_variant	MODIFIER	c.332-570dupA c.332-570dupA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328698
chrX:49328698	TA TA	T T	1	a0001c0001t0002g0058 a0001c0001t0002g0058	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-570delA c.332-570delA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328698
chrX:49328730	C C	G G	29	a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0013 others(26): Show a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0045 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0061 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0082 a0001c0001t0002g0087 a0005c0005t0002g0046 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072	47	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(44): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp2 HG01952.hp1 HG01978.hp1 HG02129.hp1 HG02148.hp2 HG02738.hp1 HG03239.hp2 HG03490.hp1 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp2 NA18946.hp1 NA18957.hp2 NA18965.hp1 NA18984.hp1 NA18989.hp1 NA18995.hp1 NA19004.hp1 NA19010.hp2 NA19064.hp2 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1	intron_variant	MODIFIER	c.332-541C>G c.332-541C>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328730
chrX:49328856	G G	A A	5	a0003c0003t0001g0037 a0004c0004t0001g0024 a0005c0005t0002g0046 others(2): Show a0003c0003t0001g0037 a0004c0004t0001g0024 a0005c0005t0002g0046 a0007c0007t0003g0043 a0007c0007t0003g0044	5	HG00280.hp1 HG02258.hp1 HG02738.hp1 others(2): Show HG00280.hp1 HG02258.hp1 HG02738.hp1 HG03486.hp2 NA18984.hp1	intron_variant	MODIFIER	c.332-415G>A c.332-415G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328856
chrX:49328907	G G	C C	3	a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047	4	NA18942.hp1 NA18953.hp1 NA18984.hp1 others(1): Show NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.332-364G>C c.332-364G>C	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328907
chrX:49328926	A A	G G	2	a0005c0005t0002g0011 a0005c0005t0002g0047 a0005c0005t0002g0011 a0005c0005t0002g0047	3	NA18942.hp1 NA18953.hp1 NA19058.hp1 NA18942.hp1 NA18953.hp1 NA19058.hp1	intron_variant	MODIFIER	c.332-345A>G c.332-345A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328926
chrX:49328931	A A	AT AT	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.332-337dupT c.332-337dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328931
chrX:49328935	A A	G G	4	a0001c0001t0002g0054 a0005c0005t0002g0011 a0005c0005t0002g0046 others(1): Show a0001c0001t0002g0054 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047	5	HG02135.hp1 NA18942.hp1 NA18953.hp1 others(2): Show HG02135.hp1 NA18942.hp1 NA18953.hp1 NA18984.hp1 NA19058.hp1	intron_variant	MODIFIER	c.332-336A>G c.332-336A>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49328935
chrX:49328999	G G	GT GT	1	a0011c0013t0002g0065 a0011c0013t0002g0065	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.332-268dupT c.332-268dupT	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49328999
chrX:49329054	T T	A A	2	a0007c0007t0003g0043 a0007c0007t0003g0044 a0007c0007t0003g0043 a0007c0007t0003g0044	2	HG00280.hp1 HG02738.hp1 HG00280.hp1 HG02738.hp1	intron_variant	MODIFIER	c.332-217T>A c.332-217T>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49329054
chrX:49329063	AG AG	A A	94	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(91): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0002c0002t0001g0001 a0002c0002t0001g0005 a0002c0002t0001g0010 a0002c0002t0001g0017 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0032 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0064 a0002c0002t0006g0018 a0003c0003t0001g0005 a0003c0003t0001g0007 a0003c0003t0001g0009 a0003c0003t0001g0016 a0003c0003t0001g0023 a0003c0003t0001g0026 a0003c0003t0001g0037 a0003c0003t0001g0040 a0003c0003t0001g0083 a0003c0003t0001g0084 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0088 a0004c0004t0001g0001 a0004c0004t0001g0021 a0004c0004t0001g0022 a0004c0004t0001g0024 a0004c0004t0001g0031 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0008c0008t0001g0001 a0008c0008t0001g0007 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042 a0014c0010t0001g0001	193	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(190): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02258.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-201delG c.332-201delG	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49329063
chrX:49329068	G G	A A	54	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 others(51): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0004g0015 a0005c0005t0002g0011 a0005c0005t0002g0046 a0005c0005t0002g0047 a0006c0006t0002g0006 a0007c0007t0003g0043 a0007c0007t0003g0044 a0009c0011t0002g0008 a0010c0012t0002g0070 a0011c0013t0002g0065 a0012c0014t0002g0072 a0013c0009t0005g0042	98	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18989.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19010.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA20805.hp1 NA20905.hp1	intron_variant	MODIFIER	c.332-203G>A c.332-203G>A	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49329068
chrX:49329098	C C	T T	1	a0004c0004t0001g0031 a0004c0004t0001g0031	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.332-173C>T c.332-173C>T	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49329098
chrX:49329160	T T	G G	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	HG01123.hp2 HG01123.hp2	intron_variant	MODIFIER	c.332-111T>G c.332-111T>G	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49329160
chrX:49329245	TC TC	T T	1	a0001c0001t0002g0069 a0001c0001t0002g0069	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.332-23delC c.332-23delC	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49329245
chrX:49329254	T T	TA TA	1	a0001c0001t0002g0053 a0001c0001t0002g0053	1	HG01123.hp1 HG01123.hp1	intron_variant	MODIFIER	c.332-17_332-16insA c.332-17_332-16insA	GAGE12J	ENSG00000224659.3	transcript	ENST00000442437.3	protein_coding	4/4		chrX	49329254

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🧬 JoGo Online Haplotype Explorer GAGE12J_chrX_49317037_49334384

JoGo Local Haplotype Explorer (on iGV) GAGE12J_chrX_49317037_49334384

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 14)

CCoding Level Haplotype Info (Total: 14)

TTranscript Level Haplotype Info (Total: 6)

GGenebody Level Haplotype Info (Total: 88)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 14)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 17)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 95)

Haplotype Details by Sample (Haploid Level) (Total: 194)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 16)

CCoding Level Variants (Synonymous Mutations) (Total: 2)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 4)

GGenebody Level Haplotype Variants (Intron) (Total: 268)

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Annotation (Repeats)

Annotation (SNP Array)