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geneid	64648
ensemblid	ENSG00000196406.4
hgncid	14332
symbol	SPANXD
name	SPANX family member D
refseq_nuc	NM_032417.4
refseq_prot	NP_115793.1
ensembl_nuc	ENST00000370515.3
ensembl_prot	ENSP00000359546.3
mane_status	MANE Select
chr	chrX
start	141697411
end	141698739
strand	-
ver	v1.2
region	chrX:141697411-141698739
region5000	chrX:141692411-141703739
regionname0	SPANXD_chrX_141697411_141698739
regionname5000	SPANXD_chrX_141692411_141703739

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	97	287	52	54	142	11	28	110	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0002	0/0	97	10	5	2	3	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0003	0/0	97	8	6	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0004	0/0	97	7	4	1	2	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0005	0/0	97	6	6	0	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0006	0/0	97	5	1	2	0	0	2	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0007	0/0	97	5	4	0	1	0	0	1	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0008	0/0	97	2	2	0	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0009	0/0	97	1	0	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0010	0/0	97	1	0	0	1	0	0	1	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0011	0/0	97	1	0	0	1	0	0	1	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0012	0/0	25	1	0	0	1	0	0	1	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	294	280	48	54	141	11	26	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0002	0/0	294	10	5	2	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0003	0/0	294	8	6	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0004	0/0	294	7	4	1	2	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0005	0/0	294	6	6	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0006	0/0	294	5	1	2	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0007	0/0	294	5	4	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0008	0/0	294	4	4	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0009	0/0	294	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0010	0/0	294	2	0	0	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0011	0/0	294	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0012	0/0	294	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0013	0/0	294	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0014	0/0	294	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
c0015	0/0	299	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	389	150	2	42	87	9	10	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0002	0/0	389	91	21	7	45	2	16	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0003	0/0	389	38	29	4	4	0	1	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0004	0/0	389	22	13	7	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0005	0/0	389	5	5	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0006	0/0	389	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0007	0/0	388	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0008	0/0	389	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0009	0/0	389	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0010	0/0	389	2	0	0	1	0	1	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0011	0/0	389	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0012	0/0	389	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0013	0/0	389	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0014	0/0	389	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0015	0/0	388	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0016	0/0	388	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0017	0/0	389	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0018	0/0	389	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0019	0/0	389	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0020	0/0	389	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0021	0/0	389	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0022	0/0	388	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
t0023	0/0	403	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	132	2	37	76	9	8	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0002	0/0	39	12	1	20	0	6	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0003	0/0	38	1	6	19	2	10	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0004	0/0	12	9	0	2	0	1	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0005	0/0	10	6	2	2	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0006	0/0	7	5	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0007	0/0	5	5	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0008	0/0	5	4	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0009	0/0	4	0	4	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0010	0/0	4	4	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0011	0/0	4	0	2	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0012	0/0	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0013	0/0	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0014	0/0	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0015	0/0	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0016	0/0	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0017	0/0	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0018	0/0	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0019	0/0	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0020	0/0	2	0	0	1	0	1	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0021	0/0	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0022	0/0	2	0	0	2	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0023	0/0	2	0	0	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0024	0/0	2	0	0	2	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0025	0/0	2	1	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0026	0/0	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0027	0/0	2	0	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0028	0/0	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0029	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0030	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0031	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0032	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0033	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0034	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0035	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0036	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0037	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0038	0/0	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0039	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0040	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0041	0/0	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0042	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0043	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0044	0/0	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0045	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0046	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0047	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0048	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0049	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0050	0/0	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0051	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0052	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0053	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0054	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0055	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0056	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0057	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0058	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0059	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
g0060	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	294	280	48	54	141	11	26	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0008	0/0	294	4	4	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0010	0/0	294	2	0	0	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0014	0/0	294	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0002c0002	0/0	294	10	5	2	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0003c0003	0/0	294	8	6	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0004c0004	0/0	294	7	4	1	2	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0005c0005	0/0	294	6	6	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0006c0006	0/0	294	5	1	2	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0007c0007	0/0	294	5	4	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0008c0009	0/0	294	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0009c0011	0/0	294	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0010c0013	0/0	294	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0011c0012	0/0	294	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0012c0015	0/0	299	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	682	146	2	42	85	9	8	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0002	0/0	682	80	14	7	41	2	16	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0003	0/0	682	26	19	2	4	0	1	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0004	0/0	682	7	5	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0005	0/0	682	5	5	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0006	0/0	682	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0007	0/0	681	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0008	0/0	682	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0010	0/0	682	2	0	0	1	0	1	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0012	0/0	682	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0014	0/0	682	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0017	0/0	682	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0018	0/0	682	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0001t0020	0/0	682	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0008t0009	0/0	682	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0008t0013	0/0	682	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0010t0001	0/0	682	2	0	0	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0001c0014t0001	0/0	682	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0002c0002t0002	0/0	682	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0002c0002t0003	0/0	682	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0002c0002t0004	0/0	682	6	4	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0003c0003t0003	0/0	682	8	6	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0004c0004t0004	0/0	682	5	4	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0004c0004t0019	0/0	682	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0004c0004t0022	0/0	681	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0005c0005t0002	0/0	682	6	6	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0006c0006t0004	0/0	682	4	0	2	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0006c0006t0021	0/0	682	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0007c0007t0001	0/0	682	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0007c0007t0002	0/0	682	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0007c0007t0003	0/0	682	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0008c0009t0011	0/0	682	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0009c0011t0015	0/0	681	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0010c0013t0016	0/0	681	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0011c0012t0002	0/0	682	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739
a0012c0015t0023	0/0	701	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	copy fasta	chrX	141692411	141703739

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	132	2	37	76	9	8	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0001g0009	0/0	4	0	4	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0001g0014	0/0	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0001g0015	0/0	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0001g0024	0/0	2	0	0	2	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0001g0043	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0001g0044	0/0	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0002g0002	0/0	39	12	1	20	0	6	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0002g0003	0/0	38	1	6	19	2	10	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0002g0032	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0002g0035	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0002g0036	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0003g0004	0/0	12	9	0	2	0	1	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0003g0005	0/0	10	6	2	2	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0003g0053	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0003g0055	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0003g0056	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0003g0057	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0004g0006	0/0	7	5	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0005g0010	0/0	4	4	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0005g0049	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0006g0012	0/0	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0007g0022	0/0	2	0	0	2	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0007g0039	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0008g0016	0/0	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0010g0020	0/0	2	0	0	1	0	1	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0012g0029	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0014g0037	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0017g0041	0/0	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0018g0042	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0001t0020g0048	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0008t0009g0018	0/0	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0008t0013g0030	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0010t0001g0023	0/0	2	0	0	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0001c0014t0001g0046	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0002c0002t0002g0013	0/0	3	0	0	3	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0002c0002t0003g0054	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0002c0002t0004g0025	0/0	2	1	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0002c0002t0004g0026	0/0	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0002c0002t0004g0050	0/0	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0002c0002t0004g0052	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0003c0003t0003g0019	0/0	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0003c0003t0003g0027	0/0	2	0	2	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0003c0003t0003g0028	0/0	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0003c0003t0003g0058	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0004c0004t0004g0008	0/0	5	4	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0004c0004t0019g0047	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0004c0004t0022g0059	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0005c0005t0002g0007	0/0	5	5	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0005c0005t0002g0031	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0006c0006t0004g0011	0/0	4	0	2	0	0	2	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0006c0006t0021g0051	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0007c0007t0001g0045	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0007c0007t0002g0033	0/0	1	1	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0007c0007t0003g0017	0/0	3	3	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0008c0009t0011g0021	0/0	2	2	0	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0009c0011t0015g0038	0/0	1	0	1	0	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0010c0013t0016g0040	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0011c0012t0002g0034	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
a0012c0015t0023g0060	0/0	1	0	0	1	0	0	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00140	hp1	a0001	c0001	t0002	g0003	EUR	GBR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00408	hp1	a0001	c0001	t0002	g0003	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00408	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00558	hp2	a0002	c0002	t0002	g0013	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00609	hp1	a0001	c0001	t0018	g0042	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00621	hp1	a0001	c0001	t0003	g0005	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00639	hp1	a0003	c0003	t0003	g0027	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00639	hp2	a0001	c0001	t0002	g0003	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00735	hp2	a0001	c0001	t0002	g0003	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01069	hp1	a0001	c0001	t0002	g0003	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01071	hp1	a0001	c0001	t0002	g0003	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01074	hp1	a0002	c0002	t0004	g0025	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01099	hp1	a0001	c0001	t0002	g0003	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01106	hp1	a0001	c0001	t0002	g0003	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01109	hp1	a0001	c0001	t0003	g0005	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01167	hp1	a0001	c0001	t0004	g0006	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01168	hp1	a0006	c0006	t0004	g0011	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01169	hp1	a0006	c0006	t0004	g0011	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01169	hp2	a0001	c0001	t0004	g0006	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01175	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01243	hp1	a0002	c0002	t0004	g0050	AMR	PUR	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01256	hp1	a0001	c0001	t0001	g0009	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01261	hp1	a0003	c0003	t0003	g0027	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01346	hp1	a0001	c0001	t0001	g0009	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01361	hp2	a0001	c0001	t0001	g0009	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01496	hp1	a0004	c0004	t0004	g0008	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01496	hp2	a0001	c0001	t0001	g0009	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01515	hp1	a0001	c0001	t0002	g0003	EUR	IBS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01884	hp1	a0005	c0005	t0002	g0007	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01884	hp2	a0008	c0009	t0011	g0021	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01891	hp1	a0001	c0001	t0002	g0032	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01891	hp2	a0001	c0001	t0002	g0002	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01934	hp1	a0001	c0001	t0017	g0041	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02004	hp2	a0009	c0011	t0015	g0038	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02040	hp1	a0001	c0001	t0002	g0003	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02055	hp1	a0001	c0008	t0009	g0018	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02056	hp1	a0001	c0001	t0001	g0015	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02074	hp1	a0001	c0001	t0002	g0003	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02080	hp2	a0001	c0001	t0002	g0003	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02129	hp1	a0001	c0014	t0001	g0046	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02135	hp1	a0001	c0001	t0002	g0035	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02145	hp1	a0001	c0001	t0003	g0004	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02155	hp1	a0001	c0001	t0002	g0002	EAS	CDX	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02165	hp2	a0001	c0001	t0001	g0014	EAS	CDX	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02257	hp1	a0004	c0004	t0004	g0008	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02257	hp2	a0006	c0006	t0021	g0051	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02258	hp1	a0005	c0005	t0002	g0007	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02273	hp1	a0001	c0001	t0001	g0044	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02280	hp1	a0001	c0001	t0005	g0010	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02280	hp2	a0001	c0001	t0004	g0006	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02451	hp1	a0001	c0001	t0003	g0057	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02451	hp2	a0001	c0001	t0004	g0006	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02523	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02572	hp1	a0002	c0002	t0004	g0052	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02602	hp1	a0001	c0001	t0002	g0003	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02615	hp1	a0001	c0001	t0005	g0010	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02615	hp2	a0001	c0001	t0002	g0002	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02630	hp1	a0001	c0001	t0002	g0002	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02630	hp2	a0001	c0001	t0003	g0004	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02647	hp1	a0001	c0001	t0003	g0004	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02717	hp1	a0003	c0003	t0003	g0019	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02723	hp1	a0001	c0001	t0003	g0004	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02723	hp2	a0003	c0003	t0003	g0058	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02738	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02809	hp1	a0008	c0009	t0011	g0021	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02809	hp2	a0001	c0001	t0002	g0002	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02818	hp1	a0001	c0001	t0003	g0053	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02818	hp2	a0002	c0002	t0004	g0026	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02886	hp1	a0001	c0001	t0003	g0005	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02886	hp2	a0005	c0005	t0002	g0007	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02895	hp1	a0001	c0001	t0002	g0002	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02896	hp1	a0002	c0002	t0003	g0054	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02896	hp2	a0001	c0001	t0003	g0004	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02897	hp1	a0001	c0001	t0002	g0002	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02897	hp2	a0001	c0001	t0003	g0004	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02922	hp1	a0001	c0001	t0003	g0005	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02922	hp2	a0002	c0002	t0004	g0025	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02965	hp1	a0001	c0001	t0003	g0055	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02970	hp1	a0001	c0001	t0003	g0004	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02970	hp2	a0001	c0001	t0004	g0006	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02976	hp1	a0001	c0001	t0002	g0002	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02976	hp2	a0003	c0003	t0003	g0028	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03041	hp1	a0001	c0001	t0003	g0056	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03041	hp2	a0002	c0002	t0004	g0026	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03098	hp1	a0004	c0004	t0004	g0008	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03130	hp1	a0001	c0001	t0003	g0004	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03139	hp1	a0001	c0008	t0013	g0030	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03195	hp1	a0007	c0007	t0002	g0033	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03195	hp2	a0001	c0001	t0003	g0005	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03209	hp1	a0001	c0001	t0006	g0012	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03225	hp1	a0001	c0001	t0005	g0049	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03239	hp1	a0001	c0001	t0002	g0003	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03239	hp2	a0001	c0010	t0001	g0023	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03453	hp1	a0007	c0007	t0003	g0017	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03453	hp2	a0003	c0003	t0003	g0019	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03486	hp2	a0004	c0004	t0004	g0008	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03490	hp1	a0001	c0001	t0002	g0003	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03492	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03516	hp1	a0007	c0007	t0003	g0017	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03516	hp2	a0001	c0001	t0005	g0010	AFR	ESN	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03540	hp1	a0001	c0008	t0009	g0018	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03540	hp2	a0001	c0001	t0006	g0012	AFR	GWD	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03579	hp1	a0005	c0005	t0002	g0007	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03654	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03669	hp1	a0001	c0001	t0002	g0003	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03669	hp2	a0001	c0001	t0002	g0003	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03688	hp1	a0001	c0001	t0002	g0002	SAS	STU	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03704	hp1	a0001	c0010	t0001	g0023	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03710	hp1	a0001	c0001	t0002	g0003	SAS	PJL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03831	hp1	a0006	c0006	t0004	g0011	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03834	hp2	a0006	c0006	t0004	g0011	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03927	hp2	a0001	c0001	t0002	g0003	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03942	hp1	a0001	c0001	t0002	g0002	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG04115	hp1	a0001	c0001	t0002	g0002	SAS	STU	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG04184	hp1	a0001	c0001	t0002	g0003	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG04184	hp2	a0001	c0001	t0002	g0003	SAS	BEB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG04199	hp1	a0001	c0001	t0003	g0004	SAS	STU	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG04228	hp1	a0001	c0001	t0002	g0003	SAS	STU	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18522	hp1	a0003	c0003	t0003	g0028	AFR	YRI	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18612	hp1	a0001	c0001	t0001	g0014	EAS	CHB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18906	hp1	a0004	c0004	t0004	g0008	AFR	YRI	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18906	hp2	a0003	c0003	t0003	g0019	AFR	YRI	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18939	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18940	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18941	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18941	hp2	a0001	c0001	t0020	g0048	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18948	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18959	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18962	hp1	a0001	c0001	t0007	g0022	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18964	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18966	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18967	hp1	a0001	c0001	t0001	g0043	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18969	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18970	hp1	a0001	c0001	t0003	g0005	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18972	hp1	a0002	c0002	t0002	g0013	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18972	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18973	hp2	a0001	c0001	t0008	g0016	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18974	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18975	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18975	hp2	a0001	c0001	t0014	g0037	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18978	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18979	hp1	a0001	c0001	t0008	g0016	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18979	hp2	a0001	c0001	t0007	g0022	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18980	hp2	a0010	c0013	t0016	g0040	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18981	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18982	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18988	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18990	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18994	hp1	a0001	c0001	t0001	g0015	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18995	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18998	hp1	a0001	c0001	t0001	g0024	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18998	hp2	a0001	c0001	t0010	g0020	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19000	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19002	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19002	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19005	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19006	hp1	a0001	c0001	t0002	g0036	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19009	hp1	a0004	c0004	t0022	g0059	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19010	hp1	a0001	c0001	t0001	g0015	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19010	hp2	a0001	c0001	t0007	g0039	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19011	hp2	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19030	hp1	a0001	c0001	t0003	g0005	AFR	LWK	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19030	hp2	a0005	c0005	t0002	g0031	AFR	LWK	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19043	hp1	a0001	c0001	t0002	g0002	AFR	LWK	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19054	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19056	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19057	hp2	a0004	c0004	t0019	g0047	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19058	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19062	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19063	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19064	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19065	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19065	hp2	a0001	c0001	t0008	g0016	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19066	hp1	a0001	c0001	t0001	g0024	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19068	hp1	a0007	c0007	t0001	g0045	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19072	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19076	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19078	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19078	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19079	hp1	a0002	c0002	t0002	g0013	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19080	hp2	a0012	c0015	t0023	g0060	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19081	hp2	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19082	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19084	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19085	hp1	a0011	c0012	t0002	g0034	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19086	hp1	a0001	c0001	t0001	g0014	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19087	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19240	hp1	a0001	c0001	t0002	g0002	AFR	YRI	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA19240	hp2	a0001	c0008	t0009	g0018	AFR	YRI	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA20129	hp1	a0001	c0001	t0002	g0002	AFR	ASW	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA20129	hp2	a0001	c0001	t0003	g0004	AFR	ASW	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA20905	hp1	a0001	c0001	t0010	g0020	SAS	GIH	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01123	hp1	a0001	c0001	t0003	g0005	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02109	hp1	a0005	c0005	t0002	g0007	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02109	hp2	a0007	c0007	t0003	g0017	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02486	hp1	a0001	c0001	t0006	g0012	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02559	hp1	a0001	c0001	t0002	g0002	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG02559	hp2	a0001	c0001	t0002	g0003	AFR	ACB	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG03471	hp1	a0001	c0001	t0005	g0010	AFR	MSL	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG06807	hp1	a0001	c0001	t0004	g0006	AFR	USA	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
HG06807	hp2	a0001	c0001	t0003	g0005	AFR	USA	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA18955	hp1	a0001	c0001	t0012	g0029	EAS	JPT	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA20300	hp1	a0001	c0001	t0004	g0006	AFR	USA	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA20300	hp2	a0001	c0001	t0002	g0002	AFR	USA	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739
NA21309	hp2	a0001	c0001	t0003	g0005	AFR	LWK	SPANXD_chrX_141692411_141703739	SPANXD	chrX	141692411	141703739

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:141697412	C C	A A	1	a0001 a0001	4	HG02055.hp1 HG03139.hp1 HG03540.hp1 others(1): Show HG02055.hp1 HG03139.hp1 HG03540.hp1 NA19240.hp2	splice_region_variant	LOW	c.53G>T c.53G>T		SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2				chrX	141697412
chrX:141697487	A A	G G	1	a0008 a0008	2	HG01884.hp2 HG02809.hp1 HG01884.hp2 HG02809.hp1	missense_variant	MODERATE	c.272T>C c.272T>C	p.Met91Thr p.Met91Thr	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	606/682	272/294	91/97	chrX	141697487
chrX:141697520	A A	T T	1	a0003 a0003	8	HG00639.hp1 HG01261.hp1 HG02717.hp1 others(5): Show HG00639.hp1 HG01261.hp1 HG02717.hp1 HG02723.hp2 HG02976.hp2 HG03453.hp2 NA18522.hp1 NA18906.hp2	missense_variant	MODERATE	c.239T>A c.239T>A	p.Leu80His p.Leu80His	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	573/682	239/294	80/97	chrX	141697520
chrX:141697521	G G	C C	1	a0003 a0003	8	HG00639.hp1 HG01261.hp1 HG02717.hp1 others(5): Show HG00639.hp1 HG01261.hp1 HG02717.hp1 HG02723.hp2 HG02976.hp2 HG03453.hp2 NA18522.hp1 NA18906.hp2	missense_variant	MODERATE	c.238C>G c.238C>G	p.Leu80Val p.Leu80Val	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	572/682	238/294	80/97	chrX	141697521
chrX:141697539	T T	C C	6	a0003 a0004 a0006 others(3): Show a0003 a0004 a0006 a0007 a0009 a0010	27	HG00639.hp1 HG01168.hp1 HG01169.hp1 others(24): Show HG00639.hp1 HG01168.hp1 HG01169.hp1 HG01261.hp1 HG01496.hp1 HG02004.hp2 HG02109.hp2 HG02257.hp1 HG02257.hp2 HG02717.hp1 HG02723.hp2 HG02976.hp2 HG03098.hp1 HG03195.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp1 HG03831.hp1 HG03834.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18980.hp2 NA19009.hp1 NA19057.hp2 NA19068.hp1	missense_variant	MODERATE	c.220A>G c.220A>G	p.Lys74Glu p.Lys74Glu	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	554/682	220/294	74/97	chrX	141697539
chrX:141697557	C C	G G	4	a0004 a0009 a0010 others(1): Show a0004 a0009 a0010 a0011	10	HG01496.hp1 HG02004.hp2 HG02257.hp1 others(7): Show HG01496.hp1 HG02004.hp2 HG02257.hp1 HG03098.hp1 HG03486.hp2 NA18906.hp1 NA18980.hp2 NA19009.hp1 NA19057.hp2 NA19085.hp1	missense_variant	MODERATE	c.202G>C c.202G>C	p.Val68Leu p.Val68Leu	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	536/682	202/294	68/97	chrX	141697557
chrX:141697582	A A	C C	1	a0009 a0009	1	HG02004.hp2 HG02004.hp2	missense_variant	MODERATE	c.177T>G c.177T>G	p.Phe59Leu p.Phe59Leu	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	511/682	177/294	59/97	chrX	141697582
chrX:141697584	A A	C C	1	a0009 a0009	1	HG02004.hp2 HG02004.hp2	missense_variant	MODERATE	c.175T>G c.175T>G	p.Phe59Val p.Phe59Val	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	509/682	175/294	59/97	chrX	141697584
chrX:141697635	G G	T T	4	a0002 a0004 a0006 others(1): Show a0002 a0004 a0006 a0009	23	HG00558.hp2 HG01074.hp1 HG01168.hp1 others(20): Show HG00558.hp2 HG01074.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01496.hp1 HG02004.hp2 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03486.hp2 HG03831.hp1 HG03834.hp2 NA18906.hp1 NA18972.hp1 NA19009.hp1 NA19057.hp2 NA19079.hp1	missense_variant	MODERATE	c.124C>A c.124C>A	p.Leu42Ile p.Leu42Ile	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	458/682	124/294	42/97	chrX	141697635
chrX:141697665	A A	C C	4	a0002 a0004 a0006 others(1): Show a0002 a0004 a0006 a0009	23	HG00558.hp2 HG01074.hp1 HG01168.hp1 others(20): Show HG00558.hp2 HG01074.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01496.hp1 HG02004.hp2 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03486.hp2 HG03831.hp1 HG03834.hp2 NA18906.hp1 NA18972.hp1 NA19009.hp1 NA19057.hp2 NA19079.hp1	missense_variant	MODERATE	c.94T>G c.94T>G	p.Tyr32Asp p.Tyr32Asp	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	428/682	94/294	32/97	chrX	141697665
chrX:141697670	C C	G G	4	a0002 a0004 a0006 others(1): Show a0002 a0004 a0006 a0009	23	HG00558.hp2 HG01074.hp1 HG01168.hp1 others(20): Show HG00558.hp2 HG01074.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01496.hp1 HG02004.hp2 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03486.hp2 HG03831.hp1 HG03834.hp2 NA18906.hp1 NA18972.hp1 NA19009.hp1 NA19057.hp2 NA19079.hp1	missense_variant	MODERATE	c.89G>C c.89G>C	p.Ser30Thr p.Ser30Thr	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	423/682	89/294	30/97	chrX	141697670
chrX:141697674	A A	G G	4	a0002 a0004 a0006 others(1): Show a0002 a0004 a0006 a0009	23	HG00558.hp2 HG01074.hp1 HG01168.hp1 others(20): Show HG00558.hp2 HG01074.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01496.hp1 HG02004.hp2 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03486.hp2 HG03831.hp1 HG03834.hp2 NA18906.hp1 NA18972.hp1 NA19009.hp1 NA19057.hp2 NA19079.hp1	missense_variant	MODERATE	c.85T>C c.85T>C	p.Ser29Pro p.Ser29Pro	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	419/682	85/294	29/97	chrX	141697674
chrX:141698335	A A	AT AT	1	a0012 a0012	1	NA19080.hp2 NA19080.hp2	frameshift_variant&splice_region_variant	HIGH	c.70dupA c.70dupA	p.Met24fs p.Met24fs	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	404/682	70/294	24/97	chrX	141698335
chrX:141698342	T T	TG TG	1	a0012 a0012	1	NA19080.hp2 NA19080.hp2	frameshift_variant	HIGH	c.63dupC c.63dupC	p.Asn22fs p.Asn22fs	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	397/682	63/294	21/97	chrX	141698342
chrX:141698355	A A	T T	1	a0005 a0005	6	HG01884.hp1 HG02109.hp1 HG02258.hp1 others(3): Show HG01884.hp1 HG02109.hp1 HG02258.hp1 HG02886.hp2 HG03579.hp1 NA19030.hp2	missense_variant	MODERATE	c.51T>A c.51T>A	p.Asp17Glu p.Asp17Glu	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	385/682	51/294	17/97	chrX	141698355
chrX:141698386	G G	GC GC	1	a0012 a0012	1	NA19080.hp2 NA19080.hp2	frameshift_variant	HIGH	c.19dupG c.19dupG	p.Ala7fs p.Ala7fs	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	353/682	19/294	7/97	chrX	141698386
chrX:141698396	G G	GT GT	1	a0012 a0012	1	NA19080.hp2 NA19080.hp2	frameshift_variant	HIGH	c.9dupA c.9dupA	p.Gln4fs p.Gln4fs	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	343/682	9/294	3/97	chrX	141698396
chrX:141698401	T T	TC TC	1	a0012 a0012	1	NA19080.hp2 NA19080.hp2	frameshift_variant	HIGH	c.4dupG c.4dupG	p.Asp2fs p.Asp2fs	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	338/682	4/294	2/97	chrX	141698401

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:141697573	T T	A A	1	a0001c0014 a0001c0014	1	HG02129.hp1 HG02129.hp1	synonymous_variant	LOW	c.186A>T c.186A>T	p.Thr62Thr p.Thr62Thr	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	520/682	186/294	62/97	chrX	141697573
chrX:141697633	T T	C C	4	a0002c0002 a0004c0004 a0006c0006 others(1): Show a0002c0002 a0004c0004 a0006c0006 a0009c0011	23	HG00558.hp2 HG01074.hp1 HG01168.hp1 others(20): Show HG00558.hp2 HG01074.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01496.hp1 HG02004.hp2 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03486.hp2 HG03831.hp1 HG03834.hp2 NA18906.hp1 NA18972.hp1 NA19009.hp1 NA19057.hp2 NA19079.hp1	synonymous_variant	LOW	c.126A>G c.126A>G	p.Leu42Leu p.Leu42Leu	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	460/682	126/294	42/97	chrX	141697633
chrX:141697636	T T	C C	1	a0001c0010 a0001c0010	2	HG03239.hp2 HG03704.hp1 HG03239.hp2 HG03704.hp1	synonymous_variant	LOW	c.123A>G c.123A>G	p.Lys41Lys p.Lys41Lys	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	457/682	123/294	41/97	chrX	141697636
chrX:141697642	C C	A A	4	a0002c0002 a0004c0004 a0006c0006 others(1): Show a0002c0002 a0004c0004 a0006c0006 a0009c0011	23	HG00558.hp2 HG01074.hp1 HG01168.hp1 others(20): Show HG00558.hp2 HG01074.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01496.hp1 HG02004.hp2 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03486.hp2 HG03831.hp1 HG03834.hp2 NA18906.hp1 NA18972.hp1 NA19009.hp1 NA19057.hp2 NA19079.hp1	synonymous_variant	LOW	c.117G>T c.117G>T	p.Pro39Pro p.Pro39Pro	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	451/682	117/294	39/97	chrX	141697642
chrX:141697642	C C	T T	2	a0001c0008 a0005c0005 a0001c0008 a0005c0005	10	HG01884.hp1 HG02055.hp1 HG02109.hp1 others(7): Show HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02258.hp1 HG02886.hp2 HG03139.hp1 HG03540.hp1 HG03579.hp1 NA19030.hp2 NA19240.hp2	synonymous_variant	LOW	c.117G>A c.117G>A	p.Pro39Pro p.Pro39Pro	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	451/682	117/294	39/97	chrX	141697642
chrX:141697672	C C	T T	4	a0002c0002 a0004c0004 a0006c0006 others(1): Show a0002c0002 a0004c0004 a0006c0006 a0009c0011	23	HG00558.hp2 HG01074.hp1 HG01168.hp1 others(20): Show HG00558.hp2 HG01074.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01496.hp1 HG02004.hp2 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03486.hp2 HG03831.hp1 HG03834.hp2 NA18906.hp1 NA18972.hp1 NA19009.hp1 NA19057.hp2 NA19079.hp1	synonymous_variant	LOW	c.87G>A c.87G>A	p.Ser29Ser p.Ser29Ser	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	421/682	87/294	29/97	chrX	141697672

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:141697431	G G	T T	5	a0004c0004t0019 a0004c0004t0022 a0006c0006t0021 others(2): Show a0004c0004t0019 a0004c0004t0022 a0006c0006t0021 a0009c0011t0015 a0010c0013t0016	5	HG02004.hp2 HG02257.hp2 NA18980.hp2 others(2): Show HG02004.hp2 HG02257.hp2 NA18980.hp2 NA19009.hp1 NA19057.hp2	3_prime_UTR_variant	MODIFIER	c.34C>A c.34C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	2/2	34	chrX	141697431
chrX:141698430	A A	T T	1	a0001c0008t0013 a0001c0008t0013	1	HG03139.hp1 HG03139.hp1	5_prime_UTR_variant	MODIFIER	c.-25T>A c.-25T>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	25	chrX	141698430
chrX:141698432	C C	T T	9	a0001c0001t0004 a0001c0001t0005 a0001c0001t0018 others(6): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0018 a0002c0002t0004 a0004c0004t0004 a0004c0004t0022 a0006c0006t0004 a0006c0006t0021 a0009c0011t0015	31	HG00609.hp1 HG01074.hp1 HG01167.hp1 others(28): Show HG00609.hp1 HG01074.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01496.hp1 HG02004.hp2 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02572.hp1 HG02615.hp1 HG02818.hp2 HG02922.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03225.hp1 HG03471.hp1 HG03486.hp2 HG03516.hp2 HG03831.hp1 HG03834.hp2 HG06807.hp1 NA18906.hp1 NA19009.hp1 NA20300.hp1	5_prime_UTR_variant	MODIFIER	c.-27G>A c.-27G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	27	chrX	141698432
chrX:141698459	T T	TC TC	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-55dupG c.-55dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	55	chrX	141698459
chrX:141698467	G G	GC GC	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-63dupG c.-63dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	63	chrX	141698467
chrX:141698482	C C	T T	2	a0001c0001t0005 a0008c0009t0011 a0001c0001t0005 a0008c0009t0011	7	HG01884.hp2 HG02280.hp1 HG02615.hp1 others(4): Show HG01884.hp2 HG02280.hp1 HG02615.hp1 HG02809.hp1 HG03225.hp1 HG03471.hp1 HG03516.hp2	5_prime_UTR_variant	MODIFIER	c.-77G>A c.-77G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	77	chrX	141698482
chrX:141698492	T T	C C	2	a0001c0001t0008 a0001c0001t0014 a0001c0001t0008 a0001c0001t0014	4	NA18973.hp2 NA18975.hp2 NA18979.hp1 others(1): Show NA18973.hp2 NA18975.hp2 NA18979.hp1 NA19065.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-87A>G c.-87A>G	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2		chrX	141698492
chrX:141698505	T T	TG TG	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-101dupC c.-101dupC	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	101	chrX	141698505
chrX:141698512	G G	C C	1	a0001c0001t0020 a0001c0001t0020	1	NA18941.hp2 NA18941.hp2	5_prime_UTR_variant	MODIFIER	c.-107C>G c.-107C>G	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	107	chrX	141698512
chrX:141698517	G G	GC GC	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-113dupG c.-113dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	113	chrX	141698517
chrX:141698577	G G	T T	1	a0001c0001t0012 a0001c0001t0012	1	NA18955.hp1 NA18955.hp1	5_prime_UTR_variant	MODIFIER	c.-172C>A c.-172C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	172	chrX	141698577
chrX:141698582	C C	CT CT	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-178dupA c.-178dupA	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	178	chrX	141698582
chrX:141698585	CG CG	C C	4	a0001c0001t0007 a0004c0004t0022 a0009c0011t0015 others(1): Show a0001c0001t0007 a0004c0004t0022 a0009c0011t0015 a0010c0013t0016	6	HG02004.hp2 NA18962.hp1 NA18979.hp2 others(3): Show HG02004.hp2 NA18962.hp1 NA18979.hp2 NA18980.hp2 NA19009.hp1 NA19010.hp2	5_prime_UTR_variant	MODIFIER	c.-181delC c.-181delC	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	181	chrX	141698585
chrX:141698589	G G	A A	4	a0001c0001t0007 a0004c0004t0022 a0009c0011t0015 others(1): Show a0001c0001t0007 a0004c0004t0022 a0009c0011t0015 a0010c0013t0016	6	HG02004.hp2 NA18962.hp1 NA18979.hp2 others(3): Show HG02004.hp2 NA18962.hp1 NA18979.hp2 NA18980.hp2 NA19009.hp1 NA19010.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-184C>T c.-184C>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2		chrX	141698589
chrX:141698603	C C	CT CT	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-199dupA c.-199dupA	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	199	chrX	141698603
chrX:141698632	A A	AG AG	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-228dupC c.-228dupC	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	228	chrX	141698632
chrX:141698639	A A	G G	9	a0001c0001t0001 a0001c0001t0008 a0001c0001t0010 others(6): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0010 a0001c0001t0018 a0001c0001t0020 a0001c0010t0001 a0001c0014t0001 a0004c0004t0019 a0007c0007t0001	158	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(155): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00609.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01123.hp2 HG01168.hp2 HG01175.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02698.hp1 HG02735.hp1 HG03017.hp1 HG03239.hp2 HG03486.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04204.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18977.hp1 NA18978.hp2 NA18979.hp1 NA18980.hp1 NA18981.hp2 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18994.hp1 NA18998.hp1 NA18998.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19054.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19078.hp2 NA19080.hp1 NA19081.hp1 NA19083.hp1 NA19084.hp1 NA19086.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1	5_prime_UTR_variant	MODIFIER	c.-234T>C c.-234T>C	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	234	chrX	141698639
chrX:141698641	A A	AG AG	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-237dupC c.-237dupC	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	237	chrX	141698641
chrX:141698647	G G	T T	1	a0001c0001t0017 a0001c0001t0017	1	HG01934.hp1 HG01934.hp1	5_prime_UTR_variant	MODIFIER	c.-242C>A c.-242C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	242	chrX	141698647
chrX:141698658	C C	CA CA	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-254dupT c.-254dupT	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	254	chrX	141698658
chrX:141698666	G G	GTTTT GTTTT	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-262_-261insAAAA c.-262_-261insAAAA	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	262	chrX	141698666
chrX:141698667	C C	G G	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-262G>C c.-262G>C	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	262	chrX	141698667
chrX:141698667	C C	T T	14	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(11): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0008t0013 a0002c0002t0002 a0005c0005t0002 a0007c0007t0002 a0008c0009t0011 a0009c0011t0015 a0010c0013t0016 a0011c0012t0002	106	HG00140.hp1 HG00408.hp1 HG00408.hp2 others(103): Show HG00140.hp1 HG00408.hp1 HG00408.hp2 HG00558.hp2 HG00639.hp2 HG00735.hp2 HG01069.hp1 HG01071.hp1 HG01099.hp1 HG01106.hp1 HG01175.hp2 HG01515.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02004.hp2 HG02040.hp1 HG02074.hp1 HG02080.hp2 HG02109.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02976.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03490.hp1 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04228.hp1 NA18939.hp1 NA18940.hp1 NA18941.hp1 NA18948.hp1 NA18955.hp1 NA18962.hp1 NA18964.hp1 NA18966.hp1 NA18969.hp2 NA18972.hp1 NA18972.hp2 NA18975.hp1 NA18975.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18988.hp1 NA18990.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19056.hp1 NA19058.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19076.hp1 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA19082.hp1 NA19085.hp1 NA19087.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20905.hp1	5_prime_UTR_variant	MODIFIER	c.-262G>A c.-262G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	262	chrX	141698667
chrX:141698669	G G	T T	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-264C>A c.-264C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	264	chrX	141698669
chrX:141698679	C C	T T	1	a0001c0001t0006 a0001c0001t0006	3	HG02486.hp1 HG03209.hp1 HG03540.hp2 HG02486.hp1 HG03209.hp1 HG03540.hp2	5_prime_UTR_variant	MODIFIER	c.-274G>A c.-274G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	274	chrX	141698679
chrX:141698699	C C	CA CA	1	a0012c0015t0023 a0012c0015t0023	1	NA19080.hp2 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-295dupT c.-295dupT	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/2	295	chrX	141698699

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:141697698	A A	G G	6	a0001c0001t0003g0055 a0002c0002t0002g0013 a0002c0002t0004g0025 others(3): Show a0001c0001t0003g0055 a0002c0002t0002g0013 a0002c0002t0004g0025 a0004c0004t0019g0047 a0004c0004t0022g0059 a0009c0011t0015g0038	9	HG00558.hp2 HG01074.hp1 HG02004.hp2 others(6): Show HG00558.hp2 HG01074.hp1 HG02004.hp2 HG02922.hp2 HG02965.hp1 NA18972.hp1 NA19009.hp1 NA19057.hp2 NA19079.hp1	intron_variant	MODIFIER	c.73-12T>C c.73-12T>C	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697698
chrX:141697728	G G	GT GT	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-43_73-42insA c.73-43_73-42insA	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697728
chrX:141697753	C C	T T	1	a0001c0001t0001g0014 a0001c0001t0001g0014	3	HG02165.hp2 NA18612.hp1 NA19086.hp1 HG02165.hp2 NA18612.hp1 NA19086.hp1	intron_variant	MODIFIER	c.73-67G>A c.73-67G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697753
chrX:141697760	G G	A A	7	a0001c0001t0003g0055 a0001c0001t0003g0056 a0002c0002t0004g0025 others(4): Show a0001c0001t0003g0055 a0001c0001t0003g0056 a0002c0002t0004g0025 a0004c0004t0019g0047 a0004c0004t0022g0059 a0009c0011t0015g0038 a0010c0013t0016g0040	8	HG01074.hp1 HG02004.hp2 HG02922.hp2 others(5): Show HG01074.hp1 HG02004.hp2 HG02922.hp2 HG02965.hp1 HG03041.hp1 NA18980.hp2 NA19009.hp1 NA19057.hp2	intron_variant	MODIFIER	c.73-74C>T c.73-74C>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697760
chrX:141697782	G G	A A	5	a0002c0002t0004g0025 a0002c0002t0004g0052 a0003c0003t0003g0019 others(2): Show a0002c0002t0004g0025 a0002c0002t0004g0052 a0003c0003t0003g0019 a0003c0003t0003g0028 a0003c0003t0003g0058	9	HG01074.hp1 HG02572.hp1 HG02717.hp1 others(6): Show HG01074.hp1 HG02572.hp1 HG02717.hp1 HG02723.hp2 HG02922.hp2 HG02976.hp2 HG03453.hp2 NA18522.hp1 NA18906.hp2	intron_variant	MODIFIER	c.73-96C>T c.73-96C>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697782
chrX:141697793	G G	A A	2	a0001c0001t0001g0024 a0001c0001t0020g0048 a0001c0001t0001g0024 a0001c0001t0020g0048	3	NA18941.hp2 NA18998.hp1 NA19066.hp1 NA18941.hp2 NA18998.hp1 NA19066.hp1	intron_variant	MODIFIER	c.73-107C>T c.73-107C>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697793
chrX:141697795	G G	T T	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	HG02273.hp1 HG02273.hp1	intron_variant	MODIFIER	c.73-109C>A c.73-109C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697795
chrX:141697806	GAGA GAGA	G G	1	a0001c0001t0006g0012 a0001c0001t0006g0012	3	HG02486.hp1 HG03209.hp1 HG03540.hp2 HG02486.hp1 HG03209.hp1 HG03540.hp2	intron_variant	MODIFIER	c.73-123_73-121delTC others(1): Show c.73-123_73-121delTCT	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697806
chrX:141697824	G G	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	4	HG01256.hp1 HG01346.hp1 HG01361.hp2 others(1): Show HG01256.hp1 HG01346.hp1 HG01361.hp2 HG01496.hp2	intron_variant	MODIFIER	c.73-138C>A c.73-138C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697824
chrX:141697827	C C	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	4	HG01256.hp1 HG01346.hp1 HG01361.hp2 others(1): Show HG01256.hp1 HG01346.hp1 HG01361.hp2 HG01496.hp2	intron_variant	MODIFIER	c.73-141G>A c.73-141G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697827
chrX:141697830	A A	G G	1	a0001c0001t0001g0009 a0001c0001t0001g0009	4	HG01256.hp1 HG01346.hp1 HG01361.hp2 others(1): Show HG01256.hp1 HG01346.hp1 HG01361.hp2 HG01496.hp2	intron_variant	MODIFIER	c.73-144T>C c.73-144T>C	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697830
chrX:141697869	G G	C C	3	a0001c0001t0002g0035 a0001c0001t0003g0053 a0005c0005t0002g0031 a0001c0001t0002g0035 a0001c0001t0003g0053 a0005c0005t0002g0031	3	HG02135.hp1 HG02818.hp1 NA19030.hp2 HG02135.hp1 HG02818.hp1 NA19030.hp2	intron_variant	MODIFIER	c.73-183C>G c.73-183C>G	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697869
chrX:141697897	T T	C C	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-211A>G c.73-211A>G	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697897
chrX:141697898	T T	A A	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-212A>T c.73-212A>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697898
chrX:141697899	T T	C C	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-213A>G c.73-213A>G	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697899
chrX:141697900	TGTC TGTC	T T	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-217_73-215delGA others(1): Show c.73-217_73-215delGAC	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697900
chrX:141697903	C C	A A	1	a0001c0001t0001g0009 a0001c0001t0001g0009	4	HG01256.hp1 HG01346.hp1 HG01361.hp2 others(1): Show HG01256.hp1 HG01346.hp1 HG01361.hp2 HG01496.hp2	intron_variant	MODIFIER	c.73-217G>T c.73-217G>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697903
chrX:141697906	T T	A A	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-220A>T c.73-220A>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697906
chrX:141697908	C C	CGCG CGCG	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-223_73-222insCG others(1): Show c.73-223_73-222insCGC	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697908
chrX:141697910	T T	G G	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-224A>C c.73-224A>C	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697910
chrX:141697912	G G	T T	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.73-226C>A c.73-226C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697912
chrX:141697952	GGGTTCAG others(73): Show GGGTTCAGGCCGTGAGAAACATCCTGCCTAACCACCTGTCCGCAAGGCGG ACAAAGGCCCAACTGAAGAAACATCCCTATC	G G	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+302_73-267delGA others(78): Show c.72+302_73-267delGATAGGGATGTTTCTTCAGTTGGGCCTTTGTC CGCCTTGCGGACAGGTGGTTAGGCAGGATGTTTCTCACGGCCTGAACC	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697952
chrX:141697993	G G	T T	1	a0001c0001t0003g0057 a0001c0001t0003g0057	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.73-307C>A c.73-307C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141697993
chrX:141698031	T T	A A	2	a0003c0003t0003g0019 a0003c0003t0003g0028 a0003c0003t0003g0019 a0003c0003t0003g0028	5	HG02717.hp1 HG02976.hp2 HG03453.hp2 others(2): Show HG02717.hp1 HG02976.hp2 HG03453.hp2 NA18522.hp1 NA18906.hp2	intron_variant	MODIFIER	c.72+303A>T c.72+303A>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698031
chrX:141698046	C C	CA CA	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+287dupT c.72+287dupT	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698046
chrX:141698048	G G	A A	2	a0003c0003t0003g0019 a0003c0003t0003g0058 a0003c0003t0003g0019 a0003c0003t0003g0058	4	HG02717.hp1 HG02723.hp2 HG03453.hp2 others(1): Show HG02717.hp1 HG02723.hp2 HG03453.hp2 NA18906.hp2	intron_variant	MODIFIER	c.72+286C>T c.72+286C>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698048
chrX:141698050	G G	GT GT	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+283dupA c.72+283dupA	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698050
chrX:141698075	T T	TC TC	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+258dupG c.72+258dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698075
chrX:141698082	G G	GA GA	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+251dupT c.72+251dupT	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698082
chrX:141698090	G G	A A	24	a0001c0001t0002g0002 a0001c0001t0002g0032 a0001c0001t0002g0035 others(21): Show a0001c0001t0002g0002 a0001c0001t0002g0032 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0003g0005 a0001c0001t0003g0057 a0001c0001t0004g0006 a0001c0001t0005g0010 a0001c0001t0006g0012 a0001c0001t0007g0022 a0001c0001t0012g0029 a0001c0001t0017g0041 a0001c0008t0009g0018 a0001c0008t0013g0030 a0002c0002t0004g0025 a0002c0002t0004g0026 a0003c0003t0003g0019 a0003c0003t0003g0028 a0003c0003t0003g0058 a0005c0005t0002g0007 a0005c0005t0002g0031 a0006c0006t0004g0011 a0011c0012t0002g0034 a0012c0015t0023g0060	97	HG00408.hp2 HG00621.hp1 HG01074.hp1 others(94): Show HG00408.hp2 HG00621.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG02055.hp1 HG02109.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02717.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA18939.hp1 NA18955.hp1 NA18962.hp1 NA18964.hp1 NA18966.hp1 NA18969.hp2 NA18970.hp1 NA18972.hp2 NA18978.hp1 NA18979.hp2 NA18981.hp1 NA18990.hp1 NA18995.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19056.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19080.hp2 NA19082.hp1 NA19085.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.72+244C>T c.72+244C>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698090
chrX:141698095	A A	AC AC	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+238dupG c.72+238dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698095
chrX:141698118	T T	C C	1	a0001c0001t0001g0015 a0001c0001t0001g0015	3	HG02056.hp1 NA18994.hp1 NA19010.hp1 HG02056.hp1 NA18994.hp1 NA19010.hp1	intron_variant	MODIFIER	c.72+216A>G c.72+216A>G	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698118
chrX:141698129	T T	C C	2	a0002c0002t0004g0025 a0002c0002t0004g0026 a0002c0002t0004g0025 a0002c0002t0004g0026	4	HG01074.hp1 HG02818.hp2 HG02922.hp2 others(1): Show HG01074.hp1 HG02818.hp2 HG02922.hp2 HG03041.hp2	intron_variant	MODIFIER	c.72+205A>G c.72+205A>G	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698129
chrX:141698145	A A	G G	1	a0001c0001t0003g0053 a0001c0001t0003g0053	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.72+189T>C c.72+189T>C	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698145
chrX:141698146	T T	TA TA	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+187dupT c.72+187dupT	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698146
chrX:141698156	G G	GC GC	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+177dupG c.72+177dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698156
chrX:141698164	C C	CCA CCA	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+169_72+170insTG c.72+169_72+170insTG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698164
chrX:141698165	A A	C C	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+169T>G c.72+169T>G	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698165
chrX:141698179	G G	GC GC	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+154dupG c.72+154dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698179
chrX:141698188	C C	G G	3	a0002c0002t0004g0025 a0002c0002t0004g0026 a0003c0003t0003g0027 a0002c0002t0004g0025 a0002c0002t0004g0026 a0003c0003t0003g0027	6	HG00639.hp1 HG01074.hp1 HG01261.hp1 others(3): Show HG00639.hp1 HG01074.hp1 HG01261.hp1 HG02818.hp2 HG02922.hp2 HG03041.hp2	intron_variant	MODIFIER	c.72+146G>C c.72+146G>C	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698188
chrX:141698189	C C	T T	3	a0002c0002t0004g0025 a0002c0002t0004g0026 a0003c0003t0003g0027 a0002c0002t0004g0025 a0002c0002t0004g0026 a0003c0003t0003g0027	6	HG00639.hp1 HG01074.hp1 HG01261.hp1 others(3): Show HG00639.hp1 HG01074.hp1 HG01261.hp1 HG02818.hp2 HG02922.hp2 HG03041.hp2	intron_variant	MODIFIER	c.72+145G>A c.72+145G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698189
chrX:141698199	C C	CG CG	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+134dupC c.72+134dupC	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698199
chrX:141698199	C C	T T	1	a0001c0001t0006g0012 a0001c0001t0006g0012	3	HG02486.hp1 HG03209.hp1 HG03540.hp2 HG02486.hp1 HG03209.hp1 HG03540.hp2	intron_variant	MODIFIER	c.72+135G>A c.72+135G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698199
chrX:141698219	C C	T T	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.72+115G>A c.72+115G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698219
chrX:141698221	G G	A A	1	a0008c0009t0011g0021 a0008c0009t0011g0021	2	HG01884.hp2 HG02809.hp1 HG01884.hp2 HG02809.hp1	intron_variant	MODIFIER	c.72+113C>T c.72+113C>T	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698221
chrX:141698222	G G	GC GC	1	a0001c0001t0002g0036 a0001c0001t0002g0036	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.72+111dupG c.72+111dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698222
chrX:141698222	G G	GCC GCC	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+110_72+111dupGG c.72+110_72+111dupGG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698222
chrX:141698232	T T	TC TC	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+101dupG c.72+101dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698232
chrX:141698236	C C	CA CA	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+97dupT c.72+97dupT	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698236
chrX:141698245	G G	GC GC	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+88dupG c.72+88dupG	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698245
chrX:141698263	T T	TTG TTG	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+70_72+71insCA c.72+70_72+71insCA	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698263
chrX:141698264	G G	T T	1	a0012c0015t0023g0060 a0012c0015t0023g0060	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.72+70C>A c.72+70C>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698264
chrX:141698274	C C	T T	1	a0002c0002t0004g0025 a0002c0002t0004g0025	2	HG01074.hp1 HG02922.hp2 HG01074.hp1 HG02922.hp2	intron_variant	MODIFIER	c.72+60G>A c.72+60G>A	SPANXD	ENSG00000196406.4	transcript	ENST00000370515.3	protein_coding	1/1	chrX	141698274

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 12)

CCoding Level Haplotype Info (Total: 15)

TTranscript Level Haplotype Info (Total: 23)

GGenebody Level Haplotype Info (Total: 60)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 15)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 36)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 60)

Haplotype Details by Sample (Haploid Level) (Total: 334)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 18)

CCoding Level Variants (Synonymous Mutations) (Total: 6)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 26)

GGenebody Level Haplotype Variants (Intron) (Total: 53)

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Annotation (Repeats)

Annotation (SNP Array)