Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| geneid | 100288695 |
|---|---|
| ensemblid | ENSG00000256671.7 |
| hgncid | 39941 |
| symbol | LIMS4 |
| name | LIM zinc finger domain containing 4 |
| refseq_nuc | NM_001371340.3 |
| refseq_prot | NP_001358269.1 |
| ensembl_nuc | ENST00000632897.2 |
| ensembl_prot | ENSP00000488340.1 |
| mane_status | MANE Select |
| chr | chr2 |
| start | 110445883 |
| end | 110472816 |
| strand | - |
| ver | v1.2 |
| region | chr2:110445883-110472816 |
| region5000 | chr2:110440883-110477816 |
| regionname0 | LIMS4_chr2_110445883_110472816 |
| regionname5000 | LIMS4_chr2_110440883_110477816 |
| ahapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 398 | 64 | 8 | 17 | 21 | 6 | 12 | 16 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002 | 0/0 | 398 | 19 | 12 | 1 | 4 | 0 | 2 | 4 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0003 | 0/0 | 398 | 4 | 3 | 0 | 1 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0004 | 0/0 | 398 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0005 | 0/0 | 398 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0006 | 0/0 | 398 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 0/0 | 1197 | 58 | 8 | 16 | 17 | 6 | 11 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| c0002 | 0/0 | 1197 | 18 | 12 | 1 | 4 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| c0003 | 0/0 | 1197 | 6 | 0 | 1 | 4 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| c0004 | 0/0 | 1197 | 4 | 3 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| c0005 | 0/0 | 1197 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| c0006 | 0/0 | 1197 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| c0007 | 0/0 | 1197 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| c0008 | 0/0 | 1197 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| thapid | grch38chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 0/0 | 895 | 55 | 9 | 13 | 18 | 6 | 9 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0002 | 0/0 | 896 | 11 | 6 | 2 | 0 | 0 | 3 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0003 | 0/0 | 896 | 5 | 4 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0004 | 0/0 | 897 | 5 | 0 | 0 | 3 | 0 | 2 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0005 | 0/0 | 896 | 4 | 0 | 1 | 3 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0006 | 0/0 | 894 | 4 | 1 | 0 | 3 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0007 | 0/0 | 896 | 2 | 2 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0008 | 0/0 | 895 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0009 | 0/0 | 896 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0010 | 0/0 | 895 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| t0011 | 0/0 | 895 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/0 | 2 | 0 | 0 | 0 | 1 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0002 | 0/0 | 2 | 0 | 1 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0003 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0004 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0006 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0007 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0008 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0009 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0010 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0011 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0013 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0014 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0015 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0016 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0018 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0019 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0022 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0023 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0025 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0026 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0027 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0028 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0030 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0031 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0032 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0034 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0036 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0037 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0039 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0041 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0042 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0046 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0047 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0048 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0049 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0052 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0053 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0055 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0056 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0057 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0060 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0062 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0063 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0065 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0066 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0067 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0068 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0069 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0070 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0071 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0072 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0073 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0074 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0076 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0077 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0079 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0080 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0081 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0082 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0083 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0084 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0085 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| g0087 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| achapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 0/0 | 1197 | 58 | 8 | 16 | 17 | 6 | 11 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0001c0003 | 0/0 | 1197 | 6 | 0 | 1 | 4 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0002 | 0/0 | 1197 | 18 | 12 | 1 | 4 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0008 | 0/0 | 1197 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0003c0004 | 0/0 | 1197 | 4 | 3 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0004c0005 | 0/0 | 1197 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0005c0006 | 0/0 | 1197 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0006c0007 | 0/0 | 1197 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 2091 | 50 | 7 | 13 | 16 | 6 | 8 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0001c0001t0002 | 0/0 | 2092 | 5 | 0 | 2 | 0 | 0 | 3 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0001c0001t0006 | 0/0 | 2090 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0001c0001t0008 | 0/0 | 2091 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0001c0001t0010 | 0/0 | 2091 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0001c0003t0001 | 0/0 | 2091 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0001c0003t0005 | 0/0 | 2092 | 4 | 0 | 1 | 3 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0001c0003t0006 | 0/0 | 2090 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0002t0002 | 0/0 | 2092 | 6 | 6 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0002t0003 | 0/0 | 2092 | 4 | 3 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0002t0004 | 0/0 | 2093 | 4 | 0 | 0 | 3 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0002t0007 | 0/0 | 2092 | 2 | 2 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0002t0009 | 0/0 | 2092 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0002t0011 | 0/0 | 2091 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0002c0008t0004 | 0/0 | 2093 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0003c0004t0001 | 0/0 | 2091 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0003c0004t0003 | 0/0 | 2092 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0003c0004t0006 | 0/0 | 2090 | 2 | 1 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0004c0005t0001 | 0/0 | 2091 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0005c0006t0001 | 0/0 | 2091 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| a0006c0007t0001 | 0/0 | 2091 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | copy fasta | chr2 | 110440883 | 110477816 |
| actghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 2 | 0 | 0 | 0 | 1 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0002 | 0/0 | 2 | 0 | 1 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0003 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0004 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0006 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0015 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0016 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0018 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0022 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0023 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0025 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0027 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0028 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0030 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0031 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0032 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0034 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0036 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0039 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0041 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0047 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0052 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0053 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0055 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0056 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0057 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0060 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0065 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0068 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0069 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0070 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0001g0076 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0002g0019 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0002g0026 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0002g0037 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0002g0048 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0002g0049 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0006g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0008g0046 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0001t0010g0007 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0003t0001g0077 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0003t0005g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0003t0005g0082 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0003t0005g0083 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0003t0005g0084 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0001c0003t0006g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0002g0062 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0002g0063 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0002g0066 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0002g0072 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0002g0073 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0002g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0003g0079 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0003g0080 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0003g0081 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0003g0085 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0004g0011 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0004g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0004g0013 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0004g0014 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0007g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0007g0067 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0009g0071 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0002t0011g0074 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0002c0008t0004g0087 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0003c0004t0001g0008 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0003c0004t0003g0010 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0003c0004t0006g0009 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0003c0004t0006g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0004c0005t0001g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0005c0006t0001g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| a0006c0007t0001g0042 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0028 | EUR | FIN | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG00280 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG00423 | hp1 | a0004 | c0005 | t0001 | g0040 | EAS | CHS | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG00423 | hp2 | a0001 | c0003 | t0005 | g0082 | EAS | CHS | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG00642 | hp1 | a0001 | c0001 | t0010 | g0007 | AMR | PUR | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG00642 | hp2 | a0001 | c0001 | t0001 | g0076 | AMR | PUR | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0041 | AMR | PUR | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01074 | hp2 | a0001 | c0001 | t0001 | g0068 | AMR | PUR | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0039 | AMR | PUR | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01109 | hp2 | a0001 | c0001 | t0001 | g0023 | AMR | PUR | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01175 | hp1 | a0001 | c0001 | t0001 | g0032 | AMR | PUR | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01175 | hp2 | a0002 | c0002 | t0003 | g0081 | AMR | PUR | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0058 | AMR | CLM | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01258 | hp2 | a0001 | c0001 | t0001 | g0060 | AMR | CLM | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01346 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01346 | hp2 | a0001 | c0001 | t0001 | g0006 | AMR | CLM | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0018 | EUR | IBS | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01515 | hp2 | a0001 | c0001 | t0001 | g0016 | EUR | IBS | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01975 | hp1 | a0001 | c0001 | t0001 | g0070 | AMR | PEL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01975 | hp2 | a0001 | c0001 | t0002 | g0049 | AMR | PEL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01978 | hp1 | a0001 | c0001 | t0001 | g0069 | AMR | PEL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG01978 | hp2 | a0001 | c0001 | t0001 | g0036 | AMR | PEL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02004 | hp1 | a0001 | c0001 | t0002 | g0048 | AMR | PEL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02004 | hp2 | a0001 | c0003 | t0005 | g0084 | AMR | PEL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02055 | hp1 | a0001 | c0001 | t0001 | g0031 | AFR | ACB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02055 | hp2 | a0003 | c0004 | t0001 | g0008 | AFR | ACB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02056 | hp1 | a0001 | c0001 | t0001 | g0020 | EAS | KHV | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02056 | hp2 | a0001 | c0001 | t0001 | g0038 | EAS | KHV | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0029 | EAS | KHV | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02129 | hp2 | a0001 | c0001 | t0001 | g0050 | EAS | KHV | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02451 | hp1 | a0002 | c0002 | t0002 | g0063 | AFR | ACB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02451 | hp2 | a0002 | c0002 | t0002 | g0072 | AFR | ACB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02615 | hp1 | a0006 | c0007 | t0001 | g0042 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02615 | hp2 | a0003 | c0004 | t0003 | g0010 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02622 | hp1 | a0001 | c0001 | t0008 | g0046 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02622 | hp2 | a0002 | c0002 | t0003 | g0080 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02683 | hp1 | a0001 | c0001 | t0002 | g0026 | SAS | PJL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02683 | hp2 | a0001 | c0001 | t0001 | g0027 | SAS | PJL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02698 | hp1 | a0001 | c0001 | t0002 | g0019 | SAS | PJL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02698 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02818 | hp1 | a0002 | c0002 | t0003 | g0079 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02818 | hp2 | a0002 | c0002 | t0002 | g0073 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02895 | hp1 | a0002 | c0002 | t0007 | g0061 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02895 | hp2 | a0001 | c0001 | t0001 | g0059 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02897 | hp1 | a0002 | c0002 | t0007 | g0067 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02897 | hp2 | a0002 | c0002 | t0002 | g0062 | AFR | GWD | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02970 | hp1 | a0001 | c0001 | t0001 | g0034 | AFR | ESN | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02970 | hp2 | a0002 | c0002 | t0002 | g0066 | AFR | ESN | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0057 | AFR | MSL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03098 | hp2 | a0002 | c0002 | t0011 | g0074 | AFR | MSL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03654 | hp1 | a0001 | c0001 | t0001 | g0053 | SAS | PJL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03654 | hp2 | a0001 | c0003 | t0001 | g0077 | SAS | PJL | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03688 | hp1 | a0002 | c0008 | t0004 | g0087 | SAS | STU | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03688 | hp2 | a0001 | c0001 | t0001 | g0025 | SAS | STU | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03831 | hp1 | a0002 | c0002 | t0004 | g0013 | SAS | BEB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03831 | hp2 | a0001 | c0001 | t0002 | g0037 | SAS | BEB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03834 | hp1 | a0001 | c0001 | t0001 | g0022 | SAS | BEB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03834 | hp2 | a0001 | c0001 | t0001 | g0004 | SAS | BEB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0052 | SAS | BEB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG03942 | hp2 | a0001 | c0001 | t0001 | g0054 | SAS | BEB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18906 | hp1 | a0002 | c0002 | t0003 | g0085 | AFR | YRI | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18906 | hp2 | a0002 | c0002 | t0002 | g0086 | AFR | YRI | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18944 | hp1 | a0001 | c0003 | t0005 | g0075 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18944 | hp2 | a0001 | c0001 | t0001 | g0055 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18945 | hp2 | a0001 | c0001 | t0001 | g0035 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18951 | hp1 | a0001 | c0001 | t0001 | g0024 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18951 | hp2 | a0001 | c0003 | t0006 | g0078 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18959 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18959 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18979 | hp1 | a0002 | c0002 | t0004 | g0011 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18979 | hp2 | a0001 | c0001 | t0001 | g0044 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18981 | hp1 | a0001 | c0001 | t0001 | g0033 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18981 | hp2 | a0002 | c0002 | t0009 | g0071 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18983 | hp1 | a0002 | c0002 | t0004 | g0012 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18983 | hp2 | a0001 | c0001 | t0001 | g0021 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18986 | hp1 | a0002 | c0002 | t0004 | g0014 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA18986 | hp2 | a0001 | c0001 | t0006 | g0017 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0045 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA19011 | hp2 | a0001 | c0001 | t0001 | g0065 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0047 | AFR | LWK | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA19043 | hp2 | a0001 | c0001 | t0001 | g0030 | AFR | LWK | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA19056 | hp2 | a0001 | c0003 | t0005 | g0083 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA19065 | hp1 | a0005 | c0006 | t0001 | g0043 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA19065 | hp2 | a0003 | c0004 | t0006 | g0051 | EAS | JPT | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0002 | EUR | TSI | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| NA20805 | hp2 | a0001 | c0001 | t0001 | g0056 | EUR | TSI | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02486 | hp1 | a0001 | c0001 | t0001 | g0064 | AFR | ACB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| HG02486 | hp2 | a0003 | c0004 | t0006 | g0009 | AFR | ACB | LIMS4_chr2_110440883_110477816 | LIMS4 | chr2 | 110440883 | 110477816 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr2:110446798
|
G | A | 1 | a0005 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.1138C>T | p.Arg380Trp | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 1176/2091 | 1138/1197 | 380/398 | chr2 | 110446798 | ||
| chr2:110451222
|
A | C | 1 | a0004 | 1 | HG00423.hp1 | missense_variant | MODERATE | c.863T>G | p.Phe288Cys | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/10 | 901/2091 | 863/1197 | 288/398 | chr2 | 110451222 | ||
| chr2:110468096
|
T | C | 1 | a0006 | 1 | HG02615.hp1 | missense_variant&splice_region_variant | MODERATE | c.341A>G | p.Glu114Gly | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/10 | 379/2091 | 341/1197 | 114/398 | chr2 | 110468096 | ||
| chr2:110468186
|
G | T | 2 | a0002a0003 | 23 | HG01175.hp2 HG02055.hp2 HG02451.hp1 others(20): Show |
missense_variant | MODERATE | c.251C>A | p.Thr84Lys | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/10 | 289/2091 | 251/1197 | 84/398 | chr2 | 110468186 | ||
| chr2:110468216
|
C | T | 1 | a0003 | 4 | HG02055.hp2 HG02486.hp2 HG02615.hp2 others(1): Show |
missense_variant | MODERATE | c.221G>A | p.Arg74His | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/10 | 259/2091 | 221/1197 | 74/398 | chr2 | 110468216 |
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr2:110468137
|
G | A | 2 | a0001c0003a0003c0004 | 10 | HG00423.hp2 HG02004.hp2 HG02055.hp2 others(7): Show |
synonymous_variant | LOW | c.300C>T | p.Cys100Cys | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/10 | 338/2091 | 300/1197 | 100/398 | chr2 | 110468137 | ||
| chr2:110472683
|
G | A | 1 | a0002c0008 | 1 | HG03688.hp1 | synonymous_variant | LOW | c.96C>T | p.Thr32Thr | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/10 | 134/2091 | 96/1197 | 32/398 | chr2 | 110472683 |
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr2:110445997
|
C | T | 2 | a0002c0002t0009a0002c0002t0011 | 2 | HG03098.hp2 NA18981.hp2 |
3_prime_UTR_variant | MODIFIER | c.*742G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 742 | chr2 | 110445997 | |||||
| chr2:110446280
|
G | A | 1 | a0001c0001t0010 | 1 | HG00642.hp1 | 3_prime_UTR_variant | MODIFIER | c.*459C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 459 | chr2 | 110446280 | |||||
| chr2:110446338
|
C | CT | 7 | a0001c0001t0002a0001c0003t0005a0002c0002t0002others(4): Show | 23 | HG00423.hp2 HG01175.hp2 HG01975.hp2 others(20): Show |
3_prime_UTR_variant | MODIFIER | c.*400dupA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 400 | chr2 | 110446338 | |||||
| chr2:110446338
|
C | CTT | 2 | a0002c0002t0004a0002c0008t0004 | 5 | HG03688.hp1 HG03831.hp1 NA18979.hp1 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*399_*400dupAA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 400 | chr2 | 110446338 | |||||
| chr2:110446402
|
G | A | 1 | a0002c0002t0007 | 2 | HG02895.hp1 HG02897.hp1 |
3_prime_UTR_variant | MODIFIER | c.*337C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 337 | chr2 | 110446402 | |||||
| chr2:110446487
|
C | T | 2 | a0002c0002t0003a0003c0004t0003 | 5 | HG01175.hp2 HG02615.hp2 HG02622.hp2 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*252G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 252 | chr2 | 110446487 | |||||
| chr2:110446495
|
C | T | 1 | a0001c0001t0008 | 1 | HG02622.hp1 | 3_prime_UTR_variant | MODIFIER | c.*244G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 244 | chr2 | 110446495 | |||||
| chr2:110446507
|
GT | G | 3 | a0001c0001t0006a0001c0003t0006a0003c0004t0006 | 4 | HG02486.hp2 NA18951.hp2 NA18986.hp2 others(1): Show |
3_prime_UTR_variant | MODIFIER | c.*231delA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 231 | chr2 | 110446507 | |||||
| chr2:110446544
|
G | T | 1 | a0001c0003t0005 | 4 | HG00423.hp2 HG02004.hp2 NA18944.hp1 others(1): Show |
3_prime_UTR_variant | MODIFIER | c.*195C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 195 | chr2 | 110446544 | |||||
| chr2:110446571
|
T | C | 2 | a0002c0002t0004a0002c0008t0004 | 5 | HG03688.hp1 HG03831.hp1 NA18979.hp1 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*168A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 168 | chr2 | 110446571 | |||||
| chr2:110446707
|
T | C | 1 | a0002c0002t0011 | 1 | HG03098.hp2 | 3_prime_UTR_variant | MODIFIER | c.*32A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 10/10 | 32 | chr2 | 110446707 |
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr2:110447075
|
G | A | 10 | a0001c0001t0001g0018a0001c0001t0001g0021a0001c0001t0001g0022others(7): Show | 10 | HG00423.hp1 HG01074.hp1 HG01258.hp2 others(7): Show |
intron_variant | MODIFIER | c.1049+10C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 9/9 | chr2 | 110447075 | ||||||
| chr2:110447290
|
G | C | 27 | a0001c0001t0001g0021a0001c0001t0001g0058a0001c0003t0005g0075others(24): Show | 27 | HG00423.hp2 HG01175.hp2 HG01258.hp1 others(24): Show |
intron_variant | MODIFIER | c.974-130C>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447290 | ||||||
| chr2:110447453
|
A | AT | 31 | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0015others(28): Show | 32 | HG00642.hp2 HG01074.hp2 HG01109.hp2 others(29): Show |
intron_variant | MODIFIER | c.974-294dupA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447453 | ||||||
| chr2:110447453
|
A | ATT | 10 | a0001c0001t0001g0020a0001c0001t0001g0035a0001c0001t0001g0036others(7): Show | 10 | HG00423.hp2 HG00642.hp1 HG01258.hp1 others(7): Show |
intron_variant | MODIFIER | c.974-295_974-294dup others(2): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447453 | ||||||
| chr2:110447453
|
ATT | A | 4 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0073others(1): Show | 4 | HG02486.hp2 HG02818.hp2 HG02897.hp2 others(1): Show |
intron_variant | MODIFIER | c.974-295_974-294del others(2): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447453 | ||||||
| chr2:110447488
|
C | T | 17 | a0002c0002t0002g0063a0002c0002t0002g0072a0002c0002t0002g0086others(14): Show | 17 | HG01175.hp2 HG02451.hp1 HG02451.hp2 others(14): Show |
intron_variant | MODIFIER | c.974-328G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447488 | ||||||
| chr2:110447589
|
G | A | 4 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0073others(1): Show | 4 | HG02486.hp2 HG02818.hp2 HG02897.hp2 others(1): Show |
intron_variant | MODIFIER | c.974-429C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447589 | ||||||
| chr2:110447788
|
G | A | 1 | a0002c0002t0002g0072 | 1 | HG02451.hp2 | intron_variant | MODIFIER | c.974-628C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447788 | ||||||
| chr2:110447843
|
T | G | 1 | a0001c0001t0001g0020 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.974-683A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447843 | ||||||
| chr2:110447976
|
G | T | 11 | a0001c0001t0001g0002a0001c0001t0001g0023a0001c0001t0001g0029others(8): Show | 12 | HG01109.hp2 HG01175.hp1 HG01346.hp1 others(9): Show |
intron_variant | MODIFIER | c.974-816C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447976 | ||||||
| chr2:110447986
|
CAGCTCGA others(22): Show |
C | 1 | a0001c0001t0001g0034 | 1 | HG02970.hp1 | intron_variant | MODIFIER | c.974-855_974-827del others(29): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447986 | ||||||
| chr2:110447992
|
G | A | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.974-832C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110447992 | ||||||
| chr2:110448112
|
C | T | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.974-952G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110448112 | ||||||
| chr2:110448281
|
C | G | 4 | a0002c0002t0007g0061a0002c0002t0007g0067a0002c0002t0009g0071others(1): Show | 4 | HG02895.hp1 HG02897.hp1 HG03098.hp2 others(1): Show |
intron_variant | MODIFIER | c.974-1121G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110448281 | ||||||
| chr2:110448369
|
C | T | 1 | a0001c0001t0001g0027 | 1 | HG02683.hp2 | intron_variant | MODIFIER | c.974-1209G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110448369 | ||||||
| chr2:110448640
|
C | T | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.973+1179G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110448640 | ||||||
| chr2:110448730
|
T | C | 1 | a0001c0001t0001g0015 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.973+1089A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110448730 | ||||||
| chr2:110448799
|
G | A | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.973+1020C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110448799 | ||||||
| chr2:110448950
|
T | C | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.973+869A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110448950 | ||||||
| chr2:110448997
|
C | T | 20 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(17): Show | 20 | HG01175.hp2 HG02451.hp1 HG02451.hp2 others(17): Show |
intron_variant | MODIFIER | c.973+822G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110448997 | ||||||
| chr2:110449499
|
C | A | 1 | a0002c0008t0004g0087 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.973+320G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110449499 | ||||||
| chr2:110449584
|
G | A | 5 | a0002c0002t0003g0079a0002c0002t0003g0080a0002c0002t0003g0081others(2): Show | 5 | HG01175.hp2 HG02615.hp2 HG02622.hp2 others(2): Show |
intron_variant | MODIFIER | c.973+235C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110449584 | ||||||
| chr2:110449596
|
A | G | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.973+223T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110449596 | ||||||
| chr2:110449608
|
A | G | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.973+211T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110449608 | ||||||
| chr2:110449716
|
C | T | 2 | a0001c0001t0001g0069a0001c0001t0001g0070 | 2 | HG01975.hp1 HG01978.hp1 |
intron_variant | MODIFIER | c.973+103G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 8/9 | chr2 | 110449716 | ||||||
| chr2:110450153
|
C | T | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.925-286G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/9 | chr2 | 110450153 | ||||||
| chr2:110450276
|
A | T | 1 | a0001c0001t0001g0055 | 1 | NA18944.hp2 | intron_variant | MODIFIER | c.925-409T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/9 | chr2 | 110450276 | ||||||
| chr2:110450277
|
A | G | 1 | a0001c0001t0001g0055 | 1 | NA18944.hp2 | intron_variant | MODIFIER | c.925-410T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/9 | chr2 | 110450277 | ||||||
| chr2:110450285
|
C | T | 2 | a0001c0001t0001g0002a0001c0001t0001g0023 | 3 | HG01109.hp2 HG01346.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.925-418G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/9 | chr2 | 110450285 | ||||||
| chr2:110450404
|
G | T | 6 | a0002c0002t0003g0079a0002c0002t0003g0080a0002c0002t0003g0081others(3): Show | 6 | HG01175.hp2 HG02486.hp2 HG02615.hp2 others(3): Show |
intron_variant | MODIFIER | c.925-537C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/9 | chr2 | 110450404 | ||||||
| chr2:110450937
|
G | A | 1 | a0001c0001t0001g0027 | 1 | HG02683.hp2 | intron_variant | MODIFIER | c.924+224C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/9 | chr2 | 110450937 | ||||||
| chr2:110451051
|
A | G | 1 | a0002c0002t0011g0074 | 1 | HG03098.hp2 | intron_variant | MODIFIER | c.924+110T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/9 | chr2 | 110451051 | ||||||
| chr2:110451127
|
A | C | 1 | a0002c0002t0003g0081 | 1 | HG01175.hp2 | intron_variant | MODIFIER | c.924+34T>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 7/9 | chr2 | 110451127 | ||||||
| chr2:110451396
|
A | G | 1 | a0001c0001t0001g0031 | 1 | HG02055.hp1 | intron_variant | MODIFIER | c.832-143T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 6/9 | chr2 | 110451396 | ||||||
| chr2:110451622
|
C | A | 29 | a0001c0001t0001g0001a0001c0001t0001g0025a0001c0001t0001g0044others(26): Show | 30 | HG00280.hp2 HG00423.hp2 HG00642.hp2 others(27): Show |
intron_variant | MODIFIER | c.831+242G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 6/9 | chr2 | 110451622 | ||||||
| chr2:110451745
|
GAATCATG others(27): Show |
G | 2 | a0002c0002t0002g0062a0002c0002t0002g0066 | 2 | HG02897.hp2 HG02970.hp2 |
intron_variant | MODIFIER | c.831+85_831+118delA others(33): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 6/9 | chr2 | 110451745 | ||||||
| chr2:110451809
|
T | G | 10 | a0001c0001t0001g0001a0001c0001t0001g0025a0001c0001t0001g0044others(7): Show | 11 | HG00280.hp2 HG00423.hp2 HG00642.hp2 others(8): Show |
intron_variant | MODIFIER | c.831+55A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 6/9 | chr2 | 110451809 | ||||||
| chr2:110452494
|
A | G | 31 | a0001c0001t0001g0001a0001c0001t0001g0025a0001c0001t0001g0058others(28): Show | 32 | HG00280.hp2 HG00423.hp2 HG00642.hp2 others(29): Show |
intron_variant | MODIFIER | c.681-480T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110452494 | ||||||
| chr2:110453151
|
C | CT | 13 | a0001c0001t0001g0035a0001c0001t0001g0039a0001c0001t0001g0065others(10): Show | 13 | HG00642.hp1 HG01109.hp1 HG02055.hp2 others(10): Show |
intron_variant | MODIFIER | c.681-1138dupA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453151 | ||||||
| chr2:110453151
|
C | CTT | 6 | a0002c0002t0003g0081a0002c0002t0004g0012a0002c0002t0007g0061others(3): Show | 6 | HG01175.hp2 HG02486.hp2 HG02895.hp1 others(3): Show |
intron_variant | MODIFIER | c.681-1139_681-1138d others(4): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453151 | ||||||
| chr2:110453151
|
C | CTTT | 4 | a0002c0002t0002g0072a0002c0002t0004g0011a0002c0002t0004g0013others(1): Show | 4 | HG02451.hp2 HG03098.hp2 HG03831.hp1 others(1): Show |
intron_variant | MODIFIER | c.681-1140_681-1138d others(5): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453151 | ||||||
| chr2:110453151
|
CT | C | 5 | a0001c0001t0001g0059a0001c0003t0005g0075a0001c0003t0005g0082others(2): Show | 5 | HG00423.hp2 HG02004.hp2 HG02895.hp2 others(2): Show |
intron_variant | MODIFIER | c.681-1138delA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453151 | ||||||
| chr2:110453155
|
T | C | 1 | a0001c0001t0001g0058 | 1 | HG01258.hp1 | intron_variant | MODIFIER | c.681-1141A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453155 | ||||||
| chr2:110453156
|
T | C | 4 | a0001c0003t0005g0075a0001c0003t0005g0082a0001c0003t0005g0083others(1): Show | 4 | HG00423.hp2 HG02004.hp2 NA18944.hp1 others(1): Show |
intron_variant | MODIFIER | c.681-1142A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453156 | ||||||
| chr2:110453275
|
C | A | 1 | a0001c0001t0001g0015 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.681-1261G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453275 | ||||||
| chr2:110453295
|
C | G | 76 | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0015others(73): Show | 77 | HG00423.hp1 HG00423.hp2 HG00642.hp1 others(74): Show |
intron_variant | MODIFIER | c.681-1281G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453295 | ||||||
| chr2:110453360
|
C | G | 1 | a0001c0001t0001g0056 | 1 | NA20805.hp2 | intron_variant | MODIFIER | c.681-1346G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453360 | ||||||
| chr2:110453511
|
G | A | 17 | a0001c0001t0001g0058a0001c0003t0005g0075a0001c0003t0005g0082others(14): Show | 17 | HG00423.hp2 HG01258.hp1 HG02004.hp2 others(14): Show |
intron_variant | MODIFIER | c.680+1340C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453511 | ||||||
| chr2:110453547
|
TA | T | 7 | a0002c0002t0002g0063a0002c0002t0002g0072a0002c0002t0007g0061others(4): Show | 7 | HG02451.hp1 HG02451.hp2 HG02486.hp2 others(4): Show |
intron_variant | MODIFIER | c.680+1303delT | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453547 | ||||||
| chr2:110453549
|
A | T | 5 | a0002c0002t0004g0011a0002c0002t0004g0012a0002c0002t0004g0013others(2): Show | 5 | HG03688.hp1 HG03831.hp1 NA18979.hp1 others(2): Show |
intron_variant | MODIFIER | c.680+1302T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453549 | ||||||
| chr2:110453564
|
G | A | 5 | a0001c0001t0001g0058a0001c0003t0005g0075a0001c0003t0005g0082others(2): Show | 5 | HG00423.hp2 HG01258.hp1 HG02004.hp2 others(2): Show |
intron_variant | MODIFIER | c.680+1287C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453564 | ||||||
| chr2:110453586
|
G | A | 2 | a0002c0002t0007g0061a0002c0002t0007g0067 | 2 | HG02895.hp1 HG02897.hp1 |
intron_variant | MODIFIER | c.680+1265C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453586 | ||||||
| chr2:110453602
|
G | A | 5 | a0001c0001t0001g0058a0001c0003t0005g0075a0001c0003t0005g0082others(2): Show | 5 | HG00423.hp2 HG01258.hp1 HG02004.hp2 others(2): Show |
intron_variant | MODIFIER | c.680+1249C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453602 | ||||||
| chr2:110453604
|
G | A | 5 | a0001c0001t0001g0058a0001c0003t0005g0075a0001c0003t0005g0082others(2): Show | 5 | HG00423.hp2 HG01258.hp1 HG02004.hp2 others(2): Show |
intron_variant | MODIFIER | c.680+1247C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453604 | ||||||
| chr2:110453689
|
C | T | 3 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0073 | 3 | HG02818.hp2 HG02897.hp2 HG02970.hp2 |
intron_variant | MODIFIER | c.680+1162G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453689 | ||||||
| chr2:110453702
|
G | A | 1 | a0002c0002t0002g0072 | 1 | HG02451.hp2 | intron_variant | MODIFIER | c.680+1149C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453702 | ||||||
| chr2:110453784
|
T | C | 1 | a0002c0002t0002g0086 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.680+1067A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453784 | ||||||
| chr2:110453785
|
T | C | 1 | a0002c0002t0002g0086 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.680+1066A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453785 | ||||||
| chr2:110453795
|
A | G | 1 | a0002c0002t0002g0086 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.680+1056T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453795 | ||||||
| chr2:110453806
|
G | A | 8 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0073others(5): Show | 8 | HG01175.hp2 HG02615.hp2 HG02622.hp2 others(5): Show |
intron_variant | MODIFIER | c.680+1045C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453806 | ||||||
| chr2:110453834
|
C | T | 8 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0073others(5): Show | 8 | HG01175.hp2 HG02615.hp2 HG02622.hp2 others(5): Show |
intron_variant | MODIFIER | c.680+1017G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453834 | ||||||
| chr2:110453876
|
T | C | 1 | a0002c0002t0002g0086 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.680+975A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453876 | ||||||
| chr2:110453956
|
T | C | 1 | a0002c0002t0002g0066 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.680+895A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110453956 | ||||||
| chr2:110454214
|
G | C | 1 | a0001c0001t0001g0055 | 1 | NA18944.hp2 | intron_variant | MODIFIER | c.680+637C>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110454214 | ||||||
| chr2:110454594
|
T | C | 3 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0073 | 3 | HG02818.hp2 HG02897.hp2 HG02970.hp2 |
intron_variant | MODIFIER | c.680+257A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110454594 | ||||||
| chr2:110454660
|
T | G | 1 | a0001c0001t0001g0015 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.680+191A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110454660 | ||||||
| chr2:110454753
|
G | A | 1 | a0001c0001t0006g0017 | 1 | NA18986.hp2 | intron_variant | MODIFIER | c.680+98C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110454753 | ||||||
| chr2:110454754
|
A | G | 1 | a0001c0001t0006g0017 | 1 | NA18986.hp2 | intron_variant | MODIFIER | c.680+97T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110454754 | ||||||
| chr2:110454755
|
G | A | 1 | a0001c0001t0006g0017 | 1 | NA18986.hp2 | intron_variant | MODIFIER | c.680+96C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 5/9 | chr2 | 110454755 | ||||||
| chr2:110455029
|
A | G | 9 | a0001c0001t0001g0002a0001c0001t0001g0023a0001c0001t0001g0029others(6): Show | 10 | HG01109.hp2 HG01346.hp1 HG01978.hp2 others(7): Show |
intron_variant | MODIFIER | c.531-29T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 4/9 | chr2 | 110455029 | ||||||
| chr2:110455047
|
T | C | 6 | a0002c0002t0002g0063a0002c0002t0003g0079a0002c0002t0003g0080others(3): Show | 6 | HG01175.hp2 HG02451.hp1 HG02615.hp2 others(3): Show |
intron_variant | MODIFIER | c.531-47A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 4/9 | chr2 | 110455047 | ||||||
| chr2:110455062
|
A | T | 1 | a0001c0001t0001g0015 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.531-62T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 4/9 | chr2 | 110455062 | ||||||
| chr2:110455114
|
C | A | 4 | a0001c0001t0001g0003a0001c0001t0001g0044a0001c0001t0001g0045others(1): Show | 5 | NA18959.hp2 NA18979.hp2 NA19011.hp1 others(2): Show |
intron_variant | MODIFIER | c.531-114G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 4/9 | chr2 | 110455114 | ||||||
| chr2:110455275
|
C | T | 15 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(12): Show | 15 | HG01175.hp2 HG02451.hp1 HG02451.hp2 others(12): Show |
intron_variant | MODIFIER | c.530+160G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 4/9 | chr2 | 110455275 | ||||||
| chr2:110455688
|
G | A | 1 | a0001c0001t0002g0048 | 1 | HG02004.hp1 | intron_variant | MODIFIER | c.410-133C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455688 | ||||||
| chr2:110455690
|
A | C | 1 | a0001c0001t0002g0048 | 1 | HG02004.hp1 | intron_variant | MODIFIER | c.410-135T>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455690 | ||||||
| chr2:110455691
|
C | CT | 8 | a0001c0001t0001g0015a0001c0003t0001g0077a0002c0002t0002g0072others(5): Show | 8 | HG02451.hp2 HG02486.hp2 HG02895.hp1 others(5): Show |
intron_variant | MODIFIER | c.410-137dupA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455691 | ||||||
| chr2:110455691
|
C | T | 1 | a0001c0001t0002g0048 | 1 | HG02004.hp1 | intron_variant | MODIFIER | c.410-136G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455691 | ||||||
| chr2:110455705
|
G | T | 32 | a0001c0001t0001g0006a0001c0001t0001g0016a0001c0001t0001g0052others(29): Show | 32 | HG00423.hp2 HG00642.hp1 HG01175.hp2 others(29): Show |
intron_variant | MODIFIER | c.410-150C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455705 | ||||||
| chr2:110455789
|
C | T | 2 | a0001c0001t0001g0002a0001c0001t0001g0023 | 3 | HG01109.hp2 HG01346.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.410-234G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455789 | ||||||
| chr2:110455922
|
G | A | 25 | a0001c0001t0001g0006a0001c0001t0001g0052a0001c0001t0001g0058others(22): Show | 25 | HG00423.hp2 HG00642.hp1 HG01175.hp2 others(22): Show |
intron_variant | MODIFIER | c.410-367C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455922 | ||||||
| chr2:110455929
|
C | A | 1 | a0003c0004t0006g0009 | 1 | HG02486.hp2 | intron_variant | MODIFIER | c.410-374G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455929 | ||||||
| chr2:110455955
|
G | A | 1 | a0001c0003t0005g0075 | 1 | NA18944.hp1 | intron_variant | MODIFIER | c.410-400C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110455955 | ||||||
| chr2:110456029
|
GT | G | 2 | a0001c0001t0001g0015a0001c0001t0006g0017 | 2 | NA18959.hp1 NA18986.hp2 |
intron_variant | MODIFIER | c.410-475delA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110456029 | ||||||
| chr2:110456397
|
C | T | 19 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0073others(16): Show | 19 | HG01175.hp2 HG02486.hp2 HG02615.hp2 others(16): Show |
intron_variant | MODIFIER | c.409+633G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110456397 | ||||||
| chr2:110456582
|
A | G | 2 | a0002c0002t0011g0074a0003c0004t0006g0009 | 2 | HG02486.hp2 HG03098.hp2 |
intron_variant | MODIFIER | c.409+448T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110456582 | ||||||
| chr2:110456707
|
G | A | 3 | a0002c0002t0004g0011a0002c0002t0004g0012a0002c0002t0004g0014 | 3 | NA18979.hp1 NA18983.hp1 NA18986.hp1 |
intron_variant | MODIFIER | c.409+323C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110456707 | ||||||
| chr2:110456721
|
G | T | 1 | a0001c0001t0001g0041 | 1 | HG01074.hp1 | intron_variant | MODIFIER | c.409+309C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110456721 | ||||||
| chr2:110456830
|
T | C | 37 | a0001c0001t0001g0006a0001c0001t0001g0029a0001c0001t0001g0035others(34): Show | 37 | HG00423.hp2 HG00642.hp1 HG00642.hp2 others(34): Show |
intron_variant | MODIFIER | c.409+200A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110456830 | ||||||
| chr2:110456876
|
A | AC | 5 | a0001c0001t0002g0048a0001c0001t0006g0017a0002c0002t0003g0080others(2): Show | 5 | HG02004.hp1 HG02622.hp2 HG03098.hp2 others(2): Show |
intron_variant | MODIFIER | c.409+153dupG | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110456876 | ||||||
| chr2:110456904
|
G | T | 3 | a0002c0002t0007g0061a0002c0002t0007g0067a0002c0002t0009g0071 | 3 | HG02895.hp1 HG02897.hp1 NA18981.hp2 |
intron_variant | MODIFIER | c.409+126C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 3/9 | chr2 | 110456904 | ||||||
| chr2:110457259
|
C | T | 70 | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0015others(67): Show | 71 | HG00423.hp1 HG00423.hp2 HG00642.hp1 others(68): Show |
intron_variant | MODIFIER | c.343-163G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457259 | ||||||
| chr2:110457284
|
G | A | 1 | a0002c0002t0002g0063 | 1 | HG02451.hp1 | intron_variant | MODIFIER | c.343-188C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457284 | ||||||
| chr2:110457545
|
T | A | 1 | a0001c0001t0002g0048 | 1 | HG02004.hp1 | intron_variant | MODIFIER | c.343-449A>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457545 | ||||||
| chr2:110457637
|
A | G | 1 | a0001c0001t0002g0048 | 1 | HG02004.hp1 | intron_variant | MODIFIER | c.343-541T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457637 | ||||||
| chr2:110457718
|
CTTAACAG others(3): Show |
C | 1 | a0001c0001t0001g0021 | 1 | NA18983.hp2 | intron_variant | MODIFIER | c.343-632_343-623del others(10): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457718 | ||||||
| chr2:110457720
|
T | A | 1 | a0001c0001t0006g0017 | 1 | NA18986.hp2 | intron_variant | MODIFIER | c.343-624A>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457720 | ||||||
| chr2:110457727
|
C | A | 3 | a0002c0002t0004g0011a0002c0002t0004g0012a0002c0002t0004g0014 | 3 | NA18979.hp1 NA18983.hp1 NA18986.hp1 |
intron_variant | MODIFIER | c.343-631G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457727 | ||||||
| chr2:110457894
|
G | T | 16 | a0001c0001t0001g0006a0001c0001t0001g0020a0001c0001t0001g0027others(13): Show | 16 | HG00423.hp2 HG00642.hp1 HG00642.hp2 others(13): Show |
intron_variant | MODIFIER | c.343-798C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457894 | ||||||
| chr2:110457904
|
T | G | 1 | a0001c0001t0006g0017 | 1 | NA18986.hp2 | intron_variant | MODIFIER | c.343-808A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457904 | ||||||
| chr2:110457965
|
A | G | 1 | a0001c0001t0002g0048 | 1 | HG02004.hp1 | intron_variant | MODIFIER | c.343-869T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110457965 | ||||||
| chr2:110458016
|
T | C | 1 | a0002c0002t0002g0063 | 1 | HG02451.hp1 | intron_variant | MODIFIER | c.343-920A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110458016 | ||||||
| chr2:110458416
|
A | G | 1 | a0001c0001t0001g0025 | 1 | HG03688.hp2 | intron_variant | MODIFIER | c.343-1320T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110458416 | ||||||
| chr2:110458458
|
C | T | 1 | a0001c0001t0001g0015 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.343-1362G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110458458 | ||||||
| chr2:110458487
|
C | T | 12 | a0001c0001t0001g0006a0001c0001t0001g0052a0001c0001t0001g0058others(9): Show | 12 | HG00423.hp2 HG00642.hp1 HG00642.hp2 others(9): Show |
intron_variant | MODIFIER | c.343-1391G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110458487 | ||||||
| chr2:110458626
|
C | T | 86 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(83): Show | 89 | HG00280.hp2 HG00423.hp1 HG00423.hp2 others(86): Show |
intron_variant | MODIFIER | c.343-1530G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110458626 | ||||||
| chr2:110458671
|
T | C | 20 | a0001c0001t0001g0015a0002c0002t0002g0062a0002c0002t0002g0063others(17): Show | 20 | HG01175.hp2 HG02451.hp1 HG02615.hp2 others(17): Show |
intron_variant | MODIFIER | c.343-1575A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110458671 | ||||||
| chr2:110458697
|
T | G | 1 | a0001c0001t0001g0036 | 1 | HG01978.hp2 | intron_variant | MODIFIER | c.343-1601A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110458697 | ||||||
| chr2:110459078
|
A | G | 19 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(16): Show | 19 | HG01175.hp2 HG02451.hp1 HG02451.hp2 others(16): Show |
intron_variant | MODIFIER | c.343-1982T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459078 | ||||||
| chr2:110459150
|
G | A | 1 | a0001c0001t0006g0017 | 1 | NA18986.hp2 | intron_variant | MODIFIER | c.343-2054C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459150 | ||||||
| chr2:110459252
|
G | A | 1 | a0001c0001t0001g0022 | 1 | HG03834.hp1 | intron_variant | MODIFIER | c.343-2156C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459252 | ||||||
| chr2:110459275
|
G | A | 9 | a0001c0001t0001g0006a0001c0001t0001g0052a0001c0001t0001g0058others(6): Show | 9 | HG00423.hp2 HG00642.hp1 HG01258.hp1 others(6): Show |
intron_variant | MODIFIER | c.343-2179C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459275 | ||||||
| chr2:110459291
|
A | G | 31 | a0001c0001t0001g0006a0001c0001t0001g0052a0001c0001t0001g0058others(28): Show | 31 | HG00423.hp2 HG00642.hp1 HG00642.hp2 others(28): Show |
intron_variant | MODIFIER | c.343-2195T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459291 | ||||||
| chr2:110459307
|
G | A | 5 | a0001c0001t0001g0059a0001c0003t0005g0075a0001c0003t0005g0082others(2): Show | 5 | HG00423.hp2 HG02004.hp2 HG02895.hp2 others(2): Show |
intron_variant | MODIFIER | c.343-2211C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459307 | ||||||
| chr2:110459337
|
GCGACATG others(7): Show |
G | 1 | a0001c0001t0001g0058 | 1 | HG01258.hp1 | intron_variant | MODIFIER | c.343-2255_343-2242d others(16): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459337 | ||||||
| chr2:110459402
|
T | G | 1 | a0001c0001t0001g0015 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.343-2306A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459402 | ||||||
| chr2:110459421
|
C | A | 29 | a0001c0001t0001g0006a0001c0001t0001g0052a0001c0001t0010g0007others(26): Show | 29 | HG00423.hp2 HG00642.hp1 HG01175.hp2 others(26): Show |
intron_variant | MODIFIER | c.343-2325G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459421 | ||||||
| chr2:110459605
|
ATATTTCA others(7): Show |
A | 10 | a0001c0001t0001g0006a0001c0001t0001g0052a0001c0001t0010g0007others(7): Show | 10 | HG00423.hp2 HG00642.hp1 HG01346.hp2 others(7): Show |
intron_variant | MODIFIER | c.343-2523_343-2510d others(16): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459605 | ||||||
| chr2:110459611
|
CA | C | 2 | a0001c0001t0006g0017a0001c0003t0006g0078 | 2 | NA18951.hp2 NA18986.hp2 |
intron_variant | MODIFIER | c.343-2516delT | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459611 | ||||||
| chr2:110459758
|
GC | G | 3 | a0001c0001t0001g0024a0001c0001t0006g0017a0002c0002t0004g0014 | 3 | NA18951.hp1 NA18986.hp1 NA18986.hp2 |
intron_variant | MODIFIER | c.343-2663delG | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459758 | ||||||
| chr2:110459908
|
A | T | 1 | a0001c0001t0001g0004 | 1 | HG03834.hp2 | intron_variant | MODIFIER | c.343-2812T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459908 | ||||||
| chr2:110459910
|
C | A | 5 | a0002c0002t0003g0079a0002c0002t0003g0080a0002c0002t0003g0081others(2): Show | 5 | HG01175.hp2 HG02615.hp2 HG02622.hp2 others(2): Show |
intron_variant | MODIFIER | c.343-2814G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110459910 | ||||||
| chr2:110460023
|
A | G | 3 | a0001c0001t0001g0035a0001c0001t0001g0036a0001c0001t0001g0065 | 3 | HG01978.hp2 NA18945.hp2 NA19011.hp2 |
intron_variant | MODIFIER | c.343-2927T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110460023 | ||||||
| chr2:110460653
|
C | A | 1 | a0001c0003t0005g0082 | 1 | HG00423.hp2 | intron_variant | MODIFIER | c.343-3557G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110460653 | ||||||
| chr2:110460659
|
A | G | 1 | a0001c0001t0001g0055 | 1 | NA18944.hp2 | intron_variant | MODIFIER | c.343-3563T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110460659 | ||||||
| chr2:110460691
|
C | T | 1 | a0002c0002t0009g0071 | 1 | NA18981.hp2 | intron_variant | MODIFIER | c.343-3595G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110460691 | ||||||
| chr2:110460863
|
C | T | 1 | a0004c0005t0001g0040 | 1 | HG00423.hp1 | intron_variant | MODIFIER | c.343-3767G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110460863 | ||||||
| chr2:110461040
|
TTTA | T | 4 | a0001c0001t0001g0054a0001c0001t0001g0055a0001c0001t0001g0059others(1): Show | 4 | HG00642.hp2 HG02895.hp2 HG03942.hp2 others(1): Show |
intron_variant | MODIFIER | c.343-3947_343-3945d others(5): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461040 | ||||||
| chr2:110461053
|
TTA | T | 34 | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(31): Show | 35 | HG00423.hp1 HG01074.hp1 HG01074.hp2 others(32): Show |
intron_variant | MODIFIER | c.343-3959_343-3958d others(4): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461053 | ||||||
| chr2:110461054
|
TA | T | 2 | a0001c0001t0001g0052a0003c0004t0006g0051 | 2 | HG03942.hp1 NA19065.hp2 |
intron_variant | MODIFIER | c.343-3959delT | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461054 | ||||||
| chr2:110461055
|
A | AT | 9 | a0001c0001t0001g0001a0001c0001t0001g0027a0001c0001t0001g0058others(6): Show | 10 | HG00280.hp2 HG01258.hp1 HG02055.hp2 others(7): Show |
intron_variant | MODIFIER | c.343-3960dupA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461055 | ||||||
| chr2:110461055
|
A | T | 8 | a0001c0001t0001g0015a0001c0001t0006g0017a0001c0003t0001g0077others(5): Show | 8 | HG01175.hp2 HG02451.hp2 HG02622.hp2 others(5): Show |
intron_variant | MODIFIER | c.343-3959T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461055 | ||||||
| chr2:110461056
|
TTA | T | 6 | a0001c0001t0001g0002a0001c0001t0001g0023a0001c0001t0001g0028others(3): Show | 7 | HG00280.hp1 HG01109.hp2 HG01346.hp1 others(4): Show |
intron_variant | MODIFIER | c.343-3962_343-3961d others(4): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461056 | ||||||
| chr2:110461058
|
A | T | 78 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(75): Show | 80 | HG00280.hp2 HG00423.hp1 HG00423.hp2 others(77): Show |
intron_variant | MODIFIER | c.343-3962T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461058 | ||||||
| chr2:110461069
|
T | C | 2 | a0002c0002t0011g0074a0003c0004t0006g0009 | 2 | HG02486.hp2 HG03098.hp2 |
intron_variant | MODIFIER | c.343-3973A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461069 | ||||||
| chr2:110461599
|
AAATTAAT others(13): Show |
A | 1 | a0001c0001t0002g0037 | 1 | HG03831.hp2 | intron_variant | MODIFIER | c.343-4523_343-4504d others(22): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461599 | ||||||
| chr2:110461622
|
G | A | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4526C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461622 | ||||||
| chr2:110461690
|
A | G | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4594T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461690 | ||||||
| chr2:110461706
|
GAA | G | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4612_343-4611d others(4): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461706 | ||||||
| chr2:110461720
|
C | G | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4624G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461720 | ||||||
| chr2:110461732
|
A | G | 3 | a0001c0001t0001g0053a0001c0001t0001g0076a0002c0002t0002g0063 | 3 | HG00642.hp2 HG02451.hp1 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4636T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461732 | ||||||
| chr2:110461777
|
G | A | 1 | a0001c0001t0001g0060 | 1 | HG01258.hp2 | intron_variant | MODIFIER | c.343-4681C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461777 | ||||||
| chr2:110461802
|
T | C | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4706A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461802 | ||||||
| chr2:110461840
|
G | A | 1 | a0001c0001t0001g0020 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.343-4744C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461840 | ||||||
| chr2:110461938
|
C | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4842G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461938 | ||||||
| chr2:110461940
|
C | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4844G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461940 | ||||||
| chr2:110461946
|
GCTTTGCT others(15): Show |
G | 1 | a0001c0001t0001g0053 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.343-4872_343-4851d others(24): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110461946 | ||||||
| chr2:110462047
|
T | C | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-4951A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462047 | ||||||
| chr2:110462250
|
C | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-5154G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462250 | ||||||
| chr2:110462297
|
T | C | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-5201A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462297 | ||||||
| chr2:110462348
|
T | C | 1 | a0001c0001t0001g0004 | 1 | HG03834.hp2 | intron_variant | MODIFIER | c.343-5252A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462348 | ||||||
| chr2:110462413
|
T | C | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-5317A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462413 | ||||||
| chr2:110462561
|
C | G | 20 | a0001c0001t0001g0006a0001c0001t0001g0052a0001c0003t0001g0077others(17): Show | 20 | HG00423.hp2 HG01175.hp2 HG01346.hp2 others(17): Show |
intron_variant | MODIFIER | c.343-5465G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462561 | ||||||
| chr2:110462588
|
C | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.343-5492G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462588 | ||||||
| chr2:110462621
|
G | T | 3 | a0001c0001t0001g0031a0001c0001t0001g0068a0003c0004t0006g0009 | 3 | HG01074.hp2 HG02055.hp1 HG02486.hp2 |
intron_variant | MODIFIER | c.342+5474C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462621 | ||||||
| chr2:110462641
|
T | G | 1 | a0001c0003t0005g0083 | 1 | NA19056.hp2 | intron_variant | MODIFIER | c.342+5454A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462641 | ||||||
| chr2:110462674
|
T | A | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+5421A>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462674 | ||||||
| chr2:110462779
|
C | A | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+5316G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462779 | ||||||
| chr2:110462785
|
C | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+5310G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462785 | ||||||
| chr2:110462814
|
A | G | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+5281T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462814 | ||||||
| chr2:110462892
|
A | G | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+5203T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462892 | ||||||
| chr2:110462896
|
T | C | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+5199A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110462896 | ||||||
| chr2:110463213
|
A | ACT | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+4880_342+4881d others(4): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463213 | ||||||
| chr2:110463217
|
C | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+4878G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463217 | ||||||
| chr2:110463261
|
A | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+4834T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463261 | ||||||
| chr2:110463328
|
T | C | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+4767A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463328 | ||||||
| chr2:110463335
|
G | A | 3 | a0001c0001t0001g0053a0001c0001t0001g0076a0002c0002t0002g0086 | 3 | HG00642.hp2 HG03654.hp1 NA18906.hp2 |
intron_variant | MODIFIER | c.342+4760C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463335 | ||||||
| chr2:110463371
|
T | TATGGTCC others(2): Show |
2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+4723_342+4724i others(11): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463371 | ||||||
| chr2:110463373
|
G | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+4722C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463373 | ||||||
| chr2:110463375
|
A | G | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+4720T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463375 | ||||||
| chr2:110463595
|
A | G | 1 | a0001c0001t0001g0030 | 1 | NA19043.hp2 | intron_variant | MODIFIER | c.342+4500T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463595 | ||||||
| chr2:110463670
|
C | G | 2 | a0001c0001t0001g0029a0001c0001t0001g0055 | 2 | HG02129.hp1 NA18944.hp2 |
intron_variant | MODIFIER | c.342+4425G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463670 | ||||||
| chr2:110463761
|
C | G | 1 | a0002c0002t0002g0073 | 1 | HG02818.hp2 | intron_variant | MODIFIER | c.342+4334G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463761 | ||||||
| chr2:110463851
|
T | C | 30 | a0001c0001t0001g0006a0001c0001t0001g0028a0001c0001t0001g0052others(27): Show | 30 | HG00280.hp1 HG00423.hp2 HG00642.hp1 others(27): Show |
intron_variant | MODIFIER | c.342+4244A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463851 | ||||||
| chr2:110463948
|
T | C | 10 | a0001c0001t0001g0006a0001c0001t0001g0028a0001c0001t0001g0052others(7): Show | 10 | HG00280.hp1 HG00423.hp2 HG00642.hp1 others(7): Show |
intron_variant | MODIFIER | c.342+4147A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110463948 | ||||||
| chr2:110464036
|
C | T | 1 | a0002c0002t0003g0079 | 1 | HG02818.hp1 | intron_variant | MODIFIER | c.342+4059G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464036 | ||||||
| chr2:110464102
|
A | T | 3 | a0001c0001t0001g0038a0002c0002t0002g0062a0002c0002t0002g0073 | 3 | HG02056.hp2 HG02818.hp2 HG02897.hp2 |
intron_variant | MODIFIER | c.342+3993T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464102 | ||||||
| chr2:110464118
|
G | T | 1 | a0002c0002t0009g0071 | 1 | NA18981.hp2 | intron_variant | MODIFIER | c.342+3977C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464118 | ||||||
| chr2:110464260
|
T | A | 1 | a0002c0002t0002g0086 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.342+3835A>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464260 | ||||||
| chr2:110464298
|
G | A | 1 | a0002c0002t0002g0072 | 1 | HG02451.hp2 | intron_variant | MODIFIER | c.342+3797C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464298 | ||||||
| chr2:110464364
|
G | A | 9 | a0001c0001t0001g0018a0001c0001t0001g0021a0001c0001t0001g0022others(6): Show | 9 | HG00423.hp1 HG01258.hp2 HG01515.hp1 others(6): Show |
intron_variant | MODIFIER | c.342+3731C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464364 | ||||||
| chr2:110464444
|
G | A | 1 | a0002c0002t0002g0063 | 1 | HG02451.hp1 | intron_variant | MODIFIER | c.342+3651C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464444 | ||||||
| chr2:110464484
|
T | C | 19 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(16): Show | 19 | HG01175.hp2 HG02451.hp1 HG02451.hp2 others(16): Show |
intron_variant | MODIFIER | c.342+3611A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464484 | ||||||
| chr2:110464556
|
A | T | 40 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(37): Show | 42 | HG00280.hp1 HG00280.hp2 HG00423.hp2 others(39): Show |
intron_variant | MODIFIER | c.342+3539T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464556 | ||||||
| chr2:110464697
|
C | T | 2 | a0001c0001t0001g0047a0001c0001t0008g0046 | 2 | HG02622.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.342+3398G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464697 | ||||||
| chr2:110464794
|
T | G | 1 | a0001c0001t0001g0039 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.342+3301A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464794 | ||||||
| chr2:110464818
|
G | T | 1 | a0001c0001t0001g0054 | 1 | HG03942.hp2 | intron_variant | MODIFIER | c.342+3277C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464818 | ||||||
| chr2:110464917
|
C | T | 23 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(20): Show | 23 | HG01175.hp2 HG02055.hp2 HG02451.hp1 others(20): Show |
intron_variant | MODIFIER | c.342+3178G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464917 | ||||||
| chr2:110464928
|
G | A | 6 | a0001c0003t0001g0077a0001c0003t0005g0075a0001c0003t0005g0082others(3): Show | 6 | HG00423.hp2 HG02004.hp2 HG03654.hp2 others(3): Show |
intron_variant | MODIFIER | c.342+3167C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110464928 | ||||||
| chr2:110465039
|
A | G | 1 | a0001c0001t0001g0050 | 1 | HG02129.hp2 | intron_variant | MODIFIER | c.342+3056T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465039 | ||||||
| chr2:110465211
|
GT | G | 29 | a0001c0003t0001g0077a0001c0003t0005g0075a0001c0003t0005g0082others(26): Show | 29 | HG00423.hp2 HG01175.hp2 HG02004.hp2 others(26): Show |
intron_variant | MODIFIER | c.342+2883delA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465211 | ||||||
| chr2:110465324
|
T | C | 1 | a0001c0001t0001g0041 | 1 | HG01074.hp1 | intron_variant | MODIFIER | c.342+2771A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465324 | ||||||
| chr2:110465331
|
C | T | 19 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(16): Show | 19 | HG01175.hp2 HG02451.hp1 HG02451.hp2 others(16): Show |
intron_variant | MODIFIER | c.342+2764G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465331 | ||||||
| chr2:110465410
|
C | T | 19 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(16): Show | 19 | HG01175.hp2 HG02451.hp1 HG02451.hp2 others(16): Show |
intron_variant | MODIFIER | c.342+2685G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465410 | ||||||
| chr2:110465417
|
C | CAGACCCA others(4): Show |
1 | a0001c0001t0001g0053 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.342+2667_342+2677d others(13): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465417 | ||||||
| chr2:110465476
|
T | C | 29 | a0001c0003t0001g0077a0001c0003t0005g0075a0001c0003t0005g0082others(26): Show | 29 | HG00423.hp2 HG01175.hp2 HG02004.hp2 others(26): Show |
intron_variant | MODIFIER | c.342+2619A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465476 | ||||||
| chr2:110465477
|
G | A | 23 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(20): Show | 23 | HG01175.hp2 HG02055.hp2 HG02451.hp1 others(20): Show |
intron_variant | MODIFIER | c.342+2618C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465477 | ||||||
| chr2:110465619
|
C | T | 23 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(20): Show | 23 | HG01175.hp2 HG02055.hp2 HG02451.hp1 others(20): Show |
intron_variant | MODIFIER | c.342+2476G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465619 | ||||||
| chr2:110465624
|
G | A | 6 | a0001c0003t0001g0077a0001c0003t0005g0075a0001c0003t0005g0082others(3): Show | 6 | HG00423.hp2 HG02004.hp2 HG03654.hp2 others(3): Show |
intron_variant | MODIFIER | c.342+2471C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465624 | ||||||
| chr2:110465663
|
G | A | 1 | a0001c0001t0001g0064 | 1 | HG02486.hp1 | intron_variant | MODIFIER | c.342+2432C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465663 | ||||||
| chr2:110465873
|
G | A | 1 | a0002c0002t0011g0074 | 1 | HG03098.hp2 | intron_variant | MODIFIER | c.342+2222C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465873 | ||||||
| chr2:110465895
|
T | C | 1 | a0002c0002t0011g0074 | 1 | HG03098.hp2 | intron_variant | MODIFIER | c.342+2200A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465895 | ||||||
| chr2:110465964
|
A | G | 4 | a0002c0002t0003g0079a0002c0002t0003g0080a0002c0002t0003g0081others(1): Show | 4 | HG01175.hp2 HG02622.hp2 HG02818.hp1 others(1): Show |
intron_variant | MODIFIER | c.342+2131T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110465964 | ||||||
| chr2:110466182
|
T | C | 28 | a0001c0003t0001g0077a0001c0003t0005g0075a0001c0003t0005g0082others(25): Show | 28 | HG00423.hp2 HG01175.hp2 HG02004.hp2 others(25): Show |
intron_variant | MODIFIER | c.342+1913A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466182 | ||||||
| chr2:110466201
|
C | T | 2 | a0001c0001t0001g0053a0001c0001t0001g0076 | 2 | HG00642.hp2 HG03654.hp1 |
intron_variant | MODIFIER | c.342+1894G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466201 | ||||||
| chr2:110466249
|
G | A | 1 | a0001c0001t0001g0023 | 1 | HG01109.hp2 | intron_variant | MODIFIER | c.342+1846C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466249 | ||||||
| chr2:110466336
|
G | T | 1 | a0001c0001t0001g0024 | 1 | NA18951.hp1 | intron_variant | MODIFIER | c.342+1759C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466336 | ||||||
| chr2:110466404
|
C | T | 4 | a0003c0004t0001g0008a0003c0004t0003g0010a0003c0004t0006g0009others(1): Show | 4 | HG02055.hp2 HG02486.hp2 HG02615.hp2 others(1): Show |
intron_variant | MODIFIER | c.342+1691G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466404 | ||||||
| chr2:110466466
|
A | C | 1 | a0001c0001t0001g0041 | 1 | HG01074.hp1 | intron_variant | MODIFIER | c.342+1629T>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466466 | ||||||
| chr2:110466506
|
TA | T | 24 | a0001c0001t0001g0022a0001c0001t0001g0023a0001c0001t0001g0041others(21): Show | 24 | HG01074.hp1 HG01109.hp2 HG01175.hp2 others(21): Show |
intron_variant | MODIFIER | c.342+1588delT | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466506 | ||||||
| chr2:110466527
|
G | T | 6 | a0001c0003t0001g0077a0001c0003t0005g0075a0001c0003t0005g0082others(3): Show | 6 | HG00423.hp2 HG02004.hp2 HG03654.hp2 others(3): Show |
intron_variant | MODIFIER | c.342+1568C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466527 | ||||||
| chr2:110466568
|
GT | G | 4 | a0003c0004t0001g0008a0003c0004t0003g0010a0003c0004t0006g0009others(1): Show | 4 | HG02055.hp2 HG02486.hp2 HG02615.hp2 others(1): Show |
intron_variant | MODIFIER | c.342+1526delA | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466568 | ||||||
| chr2:110466590
|
G | A | 4 | a0003c0004t0001g0008a0003c0004t0003g0010a0003c0004t0006g0009others(1): Show | 4 | HG02055.hp2 HG02486.hp2 HG02615.hp2 others(1): Show |
intron_variant | MODIFIER | c.342+1505C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466590 | ||||||
| chr2:110466679
|
T | A | 13 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0072others(10): Show | 13 | HG02451.hp2 HG02818.hp2 HG02895.hp1 others(10): Show |
intron_variant | MODIFIER | c.342+1416A>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110466679 | ||||||
| chr2:110467059
|
G | A | 1 | a0004c0005t0001g0040 | 1 | HG00423.hp1 | intron_variant | MODIFIER | c.342+1036C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467059 | ||||||
| chr2:110467059
|
G | T | 6 | a0001c0001t0001g0064a0002c0002t0002g0063a0002c0002t0003g0079others(3): Show | 6 | HG01175.hp2 HG02451.hp1 HG02486.hp1 others(3): Show |
intron_variant | MODIFIER | c.342+1036C>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467059 | ||||||
| chr2:110467084
|
C | T | 5 | a0002c0002t0002g0063a0002c0002t0003g0079a0002c0002t0003g0080others(2): Show | 5 | HG01175.hp2 HG02451.hp1 HG02622.hp2 others(2): Show |
intron_variant | MODIFIER | c.342+1011G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467084 | ||||||
| chr2:110467158
|
G | C | 29 | a0001c0001t0001g0047a0001c0001t0008g0046a0001c0003t0001g0077others(26): Show | 29 | HG00423.hp2 HG01175.hp2 HG02004.hp2 others(26): Show |
intron_variant | MODIFIER | c.342+937C>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467158 | ||||||
| chr2:110467278
|
C | T | 4 | a0003c0004t0001g0008a0003c0004t0003g0010a0003c0004t0006g0009others(1): Show | 4 | HG02055.hp2 HG02486.hp2 HG02615.hp2 others(1): Show |
intron_variant | MODIFIER | c.342+817G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467278 | ||||||
| chr2:110467279
|
G | A | 3 | a0002c0002t0002g0062a0002c0002t0002g0066a0002c0002t0002g0073 | 3 | HG02818.hp2 HG02897.hp2 HG02970.hp2 |
intron_variant | MODIFIER | c.342+816C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467279 | ||||||
| chr2:110467530
|
T | A | 1 | a0001c0001t0001g0041 | 1 | HG01074.hp1 | intron_variant | MODIFIER | c.342+565A>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467530 | ||||||
| chr2:110467673
|
G | A | 4 | a0003c0004t0001g0008a0003c0004t0003g0010a0003c0004t0006g0009others(1): Show | 4 | HG02055.hp2 HG02486.hp2 HG02615.hp2 others(1): Show |
intron_variant | MODIFIER | c.342+422C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467673 | ||||||
| chr2:110467730
|
G | A | 23 | a0001c0001t0006g0017a0002c0002t0002g0062a0002c0002t0002g0063others(20): Show | 23 | HG01175.hp2 HG02055.hp2 HG02451.hp1 others(20): Show |
intron_variant | MODIFIER | c.342+365C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467730 | ||||||
| chr2:110467934
|
A | C | 4 | a0003c0004t0001g0008a0003c0004t0003g0010a0003c0004t0006g0009others(1): Show | 4 | HG02055.hp2 HG02486.hp2 HG02615.hp2 others(1): Show |
intron_variant | MODIFIER | c.342+161T>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110467934 | ||||||
| chr2:110468022
|
T | G | 23 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(20): Show | 23 | HG01175.hp2 HG02055.hp2 HG02451.hp1 others(20): Show |
intron_variant | MODIFIER | c.342+73A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110468022 | ||||||
| chr2:110468046
|
C | G | 1 | a0002c0002t0002g0066 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.342+49G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110468046 | ||||||
| chr2:110468054
|
T | C | 23 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(20): Show | 23 | HG01175.hp2 HG02055.hp2 HG02451.hp1 others(20): Show |
intron_variant | MODIFIER | c.342+41A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 2/9 | chr2 | 110468054 | ||||||
| chr2:110468373
|
A | C | 8 | a0001c0001t0001g0053a0001c0001t0001g0076a0001c0003t0001g0077others(5): Show | 8 | HG00423.hp2 HG00642.hp2 HG02004.hp2 others(5): Show |
intron_variant | MODIFIER | c.183-119T>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110468373 | ||||||
| chr2:110468667
|
A | G | 2 | a0001c0001t0001g0047a0001c0001t0008g0046 | 2 | HG02622.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.183-413T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110468667 | ||||||
| chr2:110468682
|
C | A | 7 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(4): Show | 7 | HG00423.hp2 HG00642.hp2 HG02004.hp2 others(4): Show |
intron_variant | MODIFIER | c.183-428G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110468682 | ||||||
| chr2:110468700
|
T | C | 1 | a0001c0003t0005g0084 | 1 | HG02004.hp2 | intron_variant | MODIFIER | c.183-446A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110468700 | ||||||
| chr2:110468797
|
T | C | 4 | a0001c0001t0001g0003a0001c0001t0001g0044a0001c0001t0001g0045others(1): Show | 5 | NA18959.hp2 NA18979.hp2 NA19011.hp1 others(2): Show |
intron_variant | MODIFIER | c.183-543A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110468797 | ||||||
| chr2:110468956
|
T | C | 30 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(27): Show | 30 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(27): Show |
intron_variant | MODIFIER | c.183-702A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110468956 | ||||||
| chr2:110469065
|
G | C | 19 | a0002c0002t0002g0062a0002c0002t0002g0063a0002c0002t0002g0066others(16): Show | 19 | HG01175.hp2 HG02451.hp1 HG02451.hp2 others(16): Show |
intron_variant | MODIFIER | c.183-811C>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110469065 | ||||||
| chr2:110469092
|
A | G | 30 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(27): Show | 30 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(27): Show |
intron_variant | MODIFIER | c.183-838T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110469092 | ||||||
| chr2:110469142
|
C | T | 1 | a0002c0002t0009g0071 | 1 | NA18981.hp2 | intron_variant | MODIFIER | c.183-888G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110469142 | ||||||
| chr2:110469226
|
A | G | 1 | a0002c0002t0002g0066 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.183-972T>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110469226 | ||||||
| chr2:110469323
|
C | T | 1 | a0001c0001t0001g0016 | 1 | HG01515.hp2 | intron_variant | MODIFIER | c.183-1069G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110469323 | ||||||
| chr2:110469548
|
A | T | 1 | a0001c0001t0001g0021 | 1 | NA18983.hp2 | intron_variant | MODIFIER | c.183-1294T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110469548 | ||||||
| chr2:110469834
|
C | G | 6 | a0001c0001t0001g0006a0001c0001t0001g0020a0001c0001t0001g0052others(3): Show | 6 | HG00642.hp1 HG01074.hp2 HG01346.hp2 others(3): Show |
intron_variant | MODIFIER | c.183-1580G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110469834 | ||||||
| chr2:110470061
|
A | C | 30 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(27): Show | 30 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(27): Show |
intron_variant | MODIFIER | c.183-1807T>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470061 | ||||||
| chr2:110470145
|
C | G | 30 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(27): Show | 30 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(27): Show |
intron_variant | MODIFIER | c.183-1891G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470145 | ||||||
| chr2:110470175
|
C | G | 1 | a0001c0001t0001g0018 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.183-1921G>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470175 | ||||||
| chr2:110470199
|
T | C | 32 | a0001c0001t0001g0047a0001c0001t0001g0076a0001c0001t0008g0046others(29): Show | 32 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(29): Show |
intron_variant | MODIFIER | c.183-1945A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470199 | ||||||
| chr2:110470369
|
C | T | 5 | a0001c0001t0006g0017a0001c0003t0005g0075a0001c0003t0005g0082others(2): Show | 5 | HG00423.hp2 HG02004.hp2 NA18944.hp1 others(2): Show |
intron_variant | MODIFIER | c.183-2115G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470369 | ||||||
| chr2:110470441
|
G | A | 30 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(27): Show | 30 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(27): Show |
intron_variant | MODIFIER | c.182+2156C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470441 | ||||||
| chr2:110470470
|
A | T | 30 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(27): Show | 30 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(27): Show |
intron_variant | MODIFIER | c.182+2127T>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470470 | ||||||
| chr2:110470848
|
T | C | 2 | a0001c0001t0002g0048a0001c0001t0002g0049 | 2 | HG01975.hp2 HG02004.hp1 |
intron_variant | MODIFIER | c.182+1749A>G | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470848 | ||||||
| chr2:110470974
|
C | T | 1 | a0001c0001t0001g0016 | 1 | HG01515.hp2 | intron_variant | MODIFIER | c.182+1623G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470974 | ||||||
| chr2:110470989
|
T | G | 12 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(9): Show | 12 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(9): Show |
intron_variant | MODIFIER | c.182+1608A>C | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110470989 | ||||||
| chr2:110471026
|
C | T | 2 | a0001c0001t0001g0015a0001c0001t0010g0007 | 2 | HG00642.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.182+1571G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471026 | ||||||
| chr2:110471168
|
C | T | 30 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(27): Show | 30 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(27): Show |
intron_variant | MODIFIER | c.182+1429G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471168 | ||||||
| chr2:110471267
|
C | T | 1 | a0002c0002t0002g0086 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.182+1330G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471267 | ||||||
| chr2:110471307
|
C | A | 1 | a0001c0001t0001g0050 | 1 | HG02129.hp2 | intron_variant | MODIFIER | c.182+1290G>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471307 | ||||||
| chr2:110471329
|
TTG | T | 29 | a0001c0001t0001g0076a0001c0003t0001g0077a0001c0003t0005g0075others(26): Show | 29 | HG00423.hp2 HG00642.hp2 HG02004.hp2 others(26): Show |
intron_variant | MODIFIER | c.182+1266_182+1267d others(4): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471329 | ||||||
| chr2:110471507
|
G | GTATC | 14 | a0001c0001t0001g0006a0001c0001t0001g0052a0001c0001t0001g0053others(11): Show | 14 | HG01258.hp1 HG01258.hp2 HG01346.hp2 others(11): Show |
intron_variant | MODIFIER | c.182+1086_182+1089d others(6): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471507 | ||||||
| chr2:110471507
|
G | GTATCTAT others(1): Show |
16 | a0001c0001t0001g0064a0001c0001t0001g0065a0001c0001t0001g0076others(13): Show | 16 | HG00642.hp1 HG00642.hp2 HG01175.hp2 others(13): Show |
intron_variant | MODIFIER | c.182+1082_182+1089d others(10): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471507 | ||||||
| chr2:110471507
|
G | GTATCTAT others(5): Show |
6 | a0001c0003t0005g0082a0001c0003t0005g0083a0001c0003t0005g0084others(3): Show | 6 | HG00423.hp2 HG02004.hp2 HG02897.hp1 others(3): Show |
intron_variant | MODIFIER | c.182+1078_182+1089d others(14): Show |
LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471507 | ||||||
| chr2:110471684
|
G | A | 1 | a0001c0001t0001g0068 | 1 | HG01074.hp2 | intron_variant | MODIFIER | c.182+913C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471684 | ||||||
| chr2:110471819
|
C | T | 2 | a0001c0001t0001g0006a0001c0001t0010g0007 | 2 | HG00642.hp1 HG01346.hp2 |
intron_variant | MODIFIER | c.182+778G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471819 | ||||||
| chr2:110471965
|
C | T | 1 | a0001c0001t0001g0005 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.182+632G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110471965 | ||||||
| chr2:110472290
|
C | T | 1 | a0001c0001t0001g0004 | 1 | HG03834.hp2 | intron_variant | MODIFIER | c.182+307G>A | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110472290 | ||||||
| chr2:110472446
|
G | A | 1 | a0002c0002t0002g0086 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.182+151C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110472446 | ||||||
| chr2:110472461
|
G | A | 18 | a0001c0001t0001g0069a0001c0001t0001g0070a0001c0001t0001g0076others(15): Show | 18 | HG00423.hp2 HG00642.hp2 HG01175.hp2 others(15): Show |
intron_variant | MODIFIER | c.182+136C>T | LIMS4 | ENSG00000256671.7 | transcript | ENST00000632897.2 | protein_coding | 1/9 | chr2 | 110472461 |