Joint Open Genome and Omics Platform (JoGo)

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geneid	54707
ensemblid	ENSG00000142751.15
hgncid	25513
symbol	GPN2
name	GPN-loop GTPase 2
refseq_nuc	NM_018066.4
refseq_prot	NP_060536.3
ensembl_nuc	ENST00000374135.9
ensembl_prot	ENSP00000363250.3
mane_status	MANE Select
chr	chr1
start	26876132
end	26890283
strand	-
ver	v1.2
region	chr1:26876132-26890283
region5000	chr1:26871132-26895283
regionname0	GPN2_chr1_26876132_26890283
regionname5000	GPN2_chr1_26871132_26895283

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/1	310	229	68	46	70	12	32	40	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0002	1/0	310	21	2	10	0	4	4	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0003	0/0	310	6	6	0	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0004	0/0	310	1	1	0	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0005	0/0	310	1	1	0	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/1	933	219	64	46	67	12	29	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0002	1/0	933	21	2	10	0	4	4	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0003	0/0	933	5	5	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0004	0/0	933	4	0	0	3	0	1	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0005	0/0	933	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0006	0/0	933	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0007	0/0	933	2	0	0	0	0	2	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0008	0/0	933	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0009	0/0	933	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
c0010	0/0	933	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	3733	199	57	41	59	10	30	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0002	0/0	3734	9	1	1	5	0	2	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0003	0/0	3733	8	2	4	0	1	1	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0004	0/0	3733	8	1	3	0	3	1	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0005	0/0	3733	6	6	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0006	0/0	3733	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0007	0/0	3733	2	0	0	0	0	2	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0008	0/0	3733	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0009	0/0	3733	2	0	2	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0010	0/0	3733	2	0	0	2	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0011	0/0	3733	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0012	0/0	3733	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0013	0/0	3733	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0014	0/0	3733	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0015	0/0	3733	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0016	0/0	3733	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0017	0/0	3733	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0018	0/0	3733	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0019	0/0	3733	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0020	0/0	3733	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0021	0/0	3733	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0022	0/0	3733	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0023	0/0	3733	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0024	0/0	3733	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0025	0/0	3733	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0026	0/0	3771	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0027	0/0	3733	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
t0028	0/0	3734	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	88	24	12	40	3	9	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0002	0/1	25	4	5	5	1	9	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0003	0/0	9	1	4	0	2	2	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0004	0/0	8	2	4	0	1	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0005	0/0	8	6	2	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0006	0/0	7	0	1	4	0	2	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0007	0/0	7	1	2	0	3	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0008	0/0	6	6	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0009	0/0	5	0	5	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0010	0/0	5	3	2	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0011	0/0	4	0	1	0	2	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0012	0/0	4	4	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0013	0/0	2	0	2	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0014	0/0	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0015	0/0	2	0	0	2	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0016	0/0	2	1	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0017	0/0	2	1	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0018	0/0	2	0	0	1	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0019	1/0	2	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0020	0/0	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0021	0/0	2	0	0	0	0	2	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0022	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0023	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0024	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0025	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0026	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0027	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0028	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0029	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0030	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0031	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0032	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0033	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0034	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0035	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0036	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0037	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0038	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0039	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0040	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0041	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0042	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0043	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0044	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0045	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0046	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0047	0/0	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0048	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0049	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0050	0/0	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0051	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0052	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0053	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0054	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0055	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0056	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0057	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0058	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0059	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0060	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0061	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0062	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0063	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0064	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0065	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0066	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0067	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0068	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0069	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0070	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0071	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0072	0/0	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0073	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0074	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0075	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0076	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0077	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0078	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0079	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0080	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0081	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0082	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0083	0/0	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0084	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
g0085	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/1	933	219	64	46	67	12	29	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0004	0/0	933	4	0	0	3	0	1	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0005	0/0	933	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0006	0/0	933	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0007	0/0	933	2	0	0	0	0	2	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0002c0002	1/0	933	21	2	10	0	4	4	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0003c0003	0/0	933	5	5	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0003c0010	0/0	933	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0004c0008	0/0	933	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0005c0009	0/0	933	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	4665	177	55	34	56	6	25	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0002	0/0	4666	9	1	1	5	0	2	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0003	0/0	4665	8	2	4	0	1	1	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0004	0/0	4665	8	1	3	0	3	1	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0008	0/0	4665	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0010	0/0	4665	2	0	0	2	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0011	0/0	4665	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0014	0/0	4665	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0015	0/0	4665	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0016	0/0	4665	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0017	0/0	4665	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0019	0/0	4665	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0021	0/0	4665	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0022	0/0	4665	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0023	0/0	4665	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0024	0/0	4665	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0025	0/0	4665	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0026	0/0	4703	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0001t0028	0/0	4666	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0004t0001	0/0	4665	4	0	0	3	0	1	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0005t0006	0/0	4665	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0006t0013	0/0	4665	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0006t0027	0/0	4665	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0001c0007t0007	0/0	4665	2	0	0	0	0	2	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0002c0002t0001	1/0	4665	18	2	7	0	4	4	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0002c0002t0009	0/0	4665	2	0	2	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0002c0002t0020	0/0	4665	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0003c0003t0005	0/0	4665	5	5	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0003c0010t0005	0/0	4665	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0004c0008t0012	0/0	4665	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283
a0005c0009t0018	0/0	4665	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	copy fasta	chr1	26871132	26895283

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	88	24	12	40	3	9	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0002	0/1	25	4	5	5	1	9	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0005	0/0	8	6	2	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0008	0/0	6	6	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0009	0/0	5	0	5	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0010	0/0	5	3	2	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0013	0/0	2	0	2	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0016	0/0	2	1	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0017	0/0	2	1	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0020	0/0	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0024	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0032	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0033	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0034	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0038	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0039	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0041	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0042	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0043	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0046	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0047	0/0	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0049	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0051	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0052	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0053	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0060	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0061	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0062	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0063	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0066	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0067	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0068	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0070	0/0	1	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0072	0/0	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0073	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0074	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0077	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0078	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0001g0079	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0002g0006	0/0	7	0	1	4	0	2	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0002g0059	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0002g0065	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0003g0004	0/0	8	2	4	0	1	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0004g0007	0/0	7	1	2	0	3	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0004g0082	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0008g0014	0/0	2	2	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0010g0015	0/0	2	0	0	2	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0011g0022	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0014g0080	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0015g0054	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0016g0055	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0017g0081	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0019g0050	0/0	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0021g0029	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0022g0075	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0023g0027	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0024g0056	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0025g0057	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0026g0058	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0001t0028g0083	0/0	1	0	0	0	1	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0004t0001g0018	0/0	2	0	0	1	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0004t0001g0035	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0004t0001g0064	0/0	1	0	0	1	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0005t0006g0023	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0005t0006g0026	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0006t0013g0030	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0006t0027g0028	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0001c0007t0007g0021	0/0	2	0	0	0	0	2	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0001g0003	0/0	9	1	4	0	2	2	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0001g0011	0/0	4	0	1	0	2	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0001g0019	1/0	2	0	0	0	0	1	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0001g0036	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0001g0037	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0001g0069	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0009g0045	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0009g0071	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0002c0002t0020g0044	0/0	1	0	1	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0003c0003t0005g0012	0/0	4	4	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0003c0003t0005g0085	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0003c0010t0005g0084	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0004c0008t0012g0025	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
a0005c0009t0018g0076	0/0	1	1	0	0	0	0	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0003	g0004	EUR	GBR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00099	hp2	a0001	c0001	t0001	g0047	EUR	GBR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00140	hp1	a0002	c0002	t0001	g0003	EUR	GBR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00140	hp2	a0002	c0002	t0001	g0011	EUR	GBR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00280	hp1	a0001	c0001	t0004	g0007	EUR	FIN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00280	hp2	a0001	c0001	t0019	g0050	EUR	FIN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00323	hp1	a0002	c0002	t0001	g0003	EUR	FIN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00408	hp2	a0001	c0004	t0001	g0035	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00558	hp1	a0001	c0001	t0001	g0002	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00621	hp1	a0001	c0001	t0001	g0049	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00642	hp1	a0002	c0002	t0001	g0011	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00735	hp2	a0002	c0002	t0001	g0003	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00738	hp1	a0001	c0001	t0001	g0051	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG00741	hp2	a0001	c0001	t0001	g0002	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01069	hp1	a0001	c0001	t0001	g0077	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01069	hp2	a0001	c0001	t0001	g0034	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01070	hp1	a0001	c0001	t0001	g0005	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01070	hp2	a0001	c0001	t0004	g0082	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01071	hp2	a0001	c0001	t0001	g0005	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01099	hp1	a0002	c0002	t0009	g0045	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01099	hp2	a0001	c0001	t0002	g0006	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01106	hp1	a0001	c0001	t0001	g0033	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01106	hp2	a0001	c0001	t0014	g0080	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01109	hp2	a0002	c0002	t0020	g0044	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01167	hp1	a0001	c0001	t0001	g0078	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01167	hp2	a0002	c0002	t0001	g0003	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01175	hp1	a0002	c0002	t0001	g0069	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01175	hp2	a0002	c0002	t0009	g0071	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01243	hp1	a0001	c0001	t0001	g0016	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01243	hp2	a0001	c0001	t0025	g0057	AMR	PUR	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01255	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01256	hp1	a0001	c0001	t0004	g0007	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01256	hp2	a0001	c0001	t0003	g0004	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01257	hp2	a0001	c0001	t0003	g0004	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01258	hp1	a0001	c0001	t0003	g0004	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01258	hp2	a0001	c0001	t0004	g0007	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01261	hp1	a0001	c0001	t0001	g0009	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01261	hp2	a0002	c0002	t0001	g0003	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01358	hp1	a0001	c0001	t0001	g0009	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01358	hp2	a0001	c0001	t0001	g0009	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01361	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01433	hp2	a0002	c0002	t0001	g0037	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01496	hp1	a0001	c0001	t0003	g0004	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01496	hp2	a0001	c0001	t0001	g0009	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01516	hp2	a0001	c0001	t0004	g0007	EUR	IBS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01517	hp1	a0002	c0002	t0001	g0011	EUR	IBS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01517	hp2	a0001	c0001	t0001	g0072	EUR	IBS	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01884	hp2	a0001	c0001	t0001	g0008	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01891	hp1	a0005	c0009	t0018	g0076	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01891	hp2	a0001	c0001	t0002	g0065	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01975	hp1	a0001	c0001	t0001	g0013	AMR	PEL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01975	hp2	a0001	c0001	t0001	g0013	AMR	PEL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01981	hp1	a0001	c0001	t0023	g0027	AMR	PEL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01981	hp2	a0001	c0001	t0021	g0029	AMR	PEL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02004	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02004	hp2	a0001	c0001	t0001	g0009	AMR	PEL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02015	hp2	a0001	c0001	t0001	g0060	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02027	hp2	a0001	c0001	t0002	g0059	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02040	hp1	a0001	c0001	t0011	g0022	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02055	hp1	a0001	c0001	t0001	g0010	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02055	hp2	a0003	c0003	t0005	g0012	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02071	hp1	a0001	c0001	t0010	g0015	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02071	hp2	a0001	c0001	t0001	g0017	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02074	hp1	a0001	c0001	t0010	g0015	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02145	hp2	a0001	c0001	t0001	g0040	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02155	hp1	a0001	c0001	t0001	g0079	EAS	CDX	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02258	hp2	a0001	c0001	t0001	g0008	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02280	hp1	a0002	c0002	t0001	g0036	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02280	hp2	a0001	c0001	t0001	g0008	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02293	hp1	a0001	c0001	t0001	g0010	AMR	PEL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02293	hp2	a0001	c0001	t0001	g0010	AMR	PEL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02451	hp1	a0001	c0001	t0001	g0002	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02451	hp2	a0001	c0001	t0001	g0066	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02523	hp1	a0001	c0001	t0002	g0006	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02572	hp1	a0001	c0001	t0001	g0002	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02572	hp2	a0001	c0001	t0001	g0043	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02602	hp1	a0001	c0001	t0003	g0004	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02615	hp1	a0001	c0001	t0001	g0048	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02622	hp2	a0001	c0001	t0001	g0017	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02630	hp1	a0001	c0001	t0001	g0032	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02698	hp1	a0001	c0004	t0001	g0018	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02723	hp1	a0001	c0001	t0001	g0005	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02723	hp2	a0003	c0003	t0005	g0012	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02735	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02735	hp2	a0001	c0001	t0001	g0041	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02738	hp1	a0001	c0001	t0001	g0070	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02738	hp2	a0001	c0001	t0001	g0038	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02809	hp2	a0001	c0001	t0003	g0004	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02818	hp1	a0001	c0001	t0001	g0020	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02818	hp2	a0001	c0006	t0013	g0030	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02896	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02922	hp2	a0001	c0001	t0001	g0005	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02965	hp1	a0003	c0003	t0005	g0012	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02965	hp2	a0001	c0001	t0022	g0075	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02976	hp1	a0001	c0001	t0001	g0010	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02976	hp2	a0001	c0005	t0006	g0023	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03017	hp1	a0001	c0001	t0004	g0007	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03041	hp1	a0001	c0001	t0004	g0007	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03041	hp2	a0003	c0010	t0005	g0084	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03098	hp1	a0001	c0005	t0006	g0026	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03098	hp2	a0001	c0001	t0001	g0067	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03130	hp2	a0001	c0001	t0001	g0005	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03139	hp1	a0001	c0001	t0001	g0008	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03209	hp1	a0001	c0001	t0024	g0056	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03209	hp2	a0001	c0001	t0026	g0058	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03239	hp2	a0002	c0002	t0001	g0003	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03453	hp1	a0001	c0001	t0008	g0014	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03486	hp2	a0001	c0001	t0001	g0002	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03490	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03491	hp1	a0001	c0007	t0007	g0021	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03491	hp2	a0001	c0001	t0002	g0006	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03492	hp1	a0001	c0007	t0007	g0021	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03492	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03540	hp1	a0001	c0001	t0001	g0016	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03579	hp1	a0001	c0001	t0003	g0004	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03579	hp2	a0001	c0001	t0008	g0014	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03654	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03704	hp1	a0001	c0001	t0001	g0062	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03710	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03710	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03831	hp1	a0001	c0001	t0002	g0006	SAS	BEB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03831	hp2	a0001	c0001	t0001	g0002	SAS	BEB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03942	hp1	a0002	c0002	t0001	g0019	SAS	BEB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03942	hp2	a0001	c0001	t0001	g0002	SAS	BEB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG04115	hp2	a0002	c0002	t0001	g0003	SAS	STU	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG04199	hp1	a0001	c0001	t0001	g0002	SAS	STU	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG04204	hp1	a0001	c0001	t0001	g0046	SAS	STU	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG04204	hp2	a0002	c0002	t0001	g0011	SAS	STU	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18522	hp1	a0001	c0001	t0001	g0031	AFR	YRI	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18612	hp1	a0001	c0001	t0001	g0061	EAS	CHB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18906	hp2	a0001	c0001	t0001	g0002	AFR	YRI	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18962	hp2	a0001	c0001	t0001	g0042	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18963	hp1	a0001	c0001	t0002	g0006	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18963	hp2	a0001	c0004	t0001	g0018	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18966	hp1	a0001	c0001	t0001	g0024	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18969	hp2	a0001	c0001	t0001	g0073	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18982	hp2	a0001	c0001	t0001	g0052	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18983	hp2	a0001	c0001	t0016	g0055	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18997	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18997	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18998	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19005	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19030	hp1	a0001	c0001	t0001	g0005	AFR	LWK	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19030	hp2	a0001	c0001	t0001	g0010	AFR	LWK	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19043	hp1	a0002	c0002	t0001	g0003	AFR	LWK	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19043	hp2	a0001	c0001	t0001	g0001	AFR	LWK	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19056	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19056	hp2	a0001	c0004	t0001	g0064	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19062	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19077	hp1	a0001	c0001	t0002	g0006	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19077	hp2	a0001	c0001	t0017	g0081	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19084	hp1	a0001	c0001	t0015	g0054	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19087	hp1	a0001	c0001	t0002	g0006	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19087	hp2	a0001	c0001	t0001	g0053	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19090	hp1	a0001	c0001	t0001	g0074	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20129	hp1	a0001	c0001	t0001	g0005	AFR	ASW	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20752	hp2	a0001	c0001	t0004	g0007	EUR	TSI	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20805	hp1	a0001	c0001	t0028	g0083	EUR	TSI	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20905	hp1	a0001	c0001	t0001	g0063	SAS	GIH	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20905	hp2	a0001	c0001	t0001	g0039	SAS	GIH	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG01123	hp2	a0002	c0002	t0001	g0003	AMR	CLM	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02109	hp1	a0003	c0003	t0005	g0012	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02109	hp2	a0001	c0006	t0027	g0028	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02486	hp2	a0001	c0001	t0001	g0008	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02559	hp1	a0001	c0001	t0001	g0005	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG02559	hp2	a0001	c0001	t0001	g0068	AFR	ACB	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG03471	hp2	a0001	c0001	t0001	g0008	AFR	MSL	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG06807	hp1	a0001	c0001	t0001	g0020	AFR	USA	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20300	hp1	a0003	c0003	t0005	g0085	AFR	USA	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA21309	hp1	a0004	c0008	t0012	g0025	AFR	LWK	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0002	REF	REF	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283
homoSapiens_grch38	hp1	a0002	c0002	t0001	g0019	REF	REF	GPN2_chr1_26871132_26895283	GPN2	chr1	26871132	26895283

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:26884188	C C	T T	1	a0005 a0005	1	HG01891.hp1 HG01891.hp1	missense_variant	MODERATE	c.832G>A c.832G>A	p.Ala278Thr p.Ala278Thr	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/5	1019/4665	832/933	278/310	chr1	26884188
chr1:26884230	T T	C C	4	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	237	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(234): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp2 HG04115.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18944.hp1 NA18944.hp2 NA18952.hp1 NA18952.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18989.hp1 NA18989.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19005.hp1 NA19005.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19077.hp1 NA19077.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.790A>G c.790A>G	p.Arg264Gly p.Arg264Gly	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/5	977/4665	790/933	264/310	chr1	26884230
chr1:26884271	C C	T T	1	a0004 a0004	1	NA21309.hp1 NA21309.hp1	missense_variant	MODERATE	c.749G>A c.749G>A	p.Arg250Gln p.Arg250Gln	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/5	936/4665	749/933	250/310	chr1	26884271
chr1:26886022	T T	C C	1	a0003 a0003	6	HG02055.hp2 HG02109.hp1 HG02723.hp2 others(3): Show HG02055.hp2 HG02109.hp1 HG02723.hp2 HG02965.hp1 HG03041.hp2 NA20300.hp1	missense_variant	MODERATE	c.680A>G c.680A>G	p.Gln227Arg p.Gln227Arg	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/5	867/4665	680/933	227/310	chr1	26886022

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:26879680	C C	T T	1	a0001c0006 a0001c0006	2	HG02109.hp2 HG02818.hp2 HG02109.hp2 HG02818.hp2	synonymous_variant	LOW	c.930G>A c.930G>A	p.Leu310Leu p.Leu310Leu	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1117/4665	930/933	310/310	chr1	26879680
chr1:26884231	G G	A A	1	a0001c0004 a0001c0004	4	HG00408.hp2 HG02698.hp1 NA18963.hp2 others(1): Show HG00408.hp2 HG02698.hp1 NA18963.hp2 NA19056.hp2	synonymous_variant	LOW	c.789C>T c.789C>T	p.Phe263Phe p.Phe263Phe	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/5	976/4665	789/933	263/310	chr1	26884231
chr1:26884267	G G	T T	1	a0001c0005 a0001c0005	2	HG02976.hp2 HG03098.hp1 HG02976.hp2 HG03098.hp1	synonymous_variant	LOW	c.753C>A c.753C>A	p.Val251Val p.Val251Val	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/5	940/4665	753/933	251/310	chr1	26884267
chr1:26889701	C C	T T	1	a0003c0010 a0003c0010	1	HG03041.hp2 HG03041.hp2	synonymous_variant	LOW	c.396G>A c.396G>A	p.Ala132Ala p.Ala132Ala	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	1/5	583/4665	396/933	132/310	chr1	26889701
chr1:26889857	G G	C C	1	a0001c0007 a0001c0007	2	HG03491.hp1 HG03492.hp1 HG03491.hp1 HG03492.hp1	synonymous_variant	LOW	c.240C>G c.240C>G	p.Gly80Gly p.Gly80Gly	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	1/5	427/4665	240/933	80/310	chr1	26889857
chr1:26890040	G G	A A	2	a0003c0003 a0003c0010 a0003c0003 a0003c0010	6	HG02055.hp2 HG02109.hp1 HG02723.hp2 others(3): Show HG02055.hp2 HG02109.hp1 HG02723.hp2 HG02965.hp1 HG03041.hp2 NA20300.hp1	synonymous_variant	LOW	c.57C>T c.57C>T	p.Gly19Gly p.Gly19Gly	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	1/5	244/4665	57/933	19/310	chr1	26890040

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:26876146	G G	C C	1	a0001c0001t0019 a0001c0001t0019	1	HG00280.hp2 HG00280.hp2	3_prime_UTR_variant	MODIFIER	c.3531C>G c.3531C>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	3531	chr1	26876146
chr1:26876190	G G	A A	1	a0002c0002t0020 a0002c0002t0020	1	HG01109.hp2 HG01109.hp2	3_prime_UTR_variant	MODIFIER	c.3487C>T c.3487C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	3487	chr1	26876190
chr1:26876218	G G	GT GT	2	a0001c0001t0002 a0001c0001t0028 a0001c0001t0002 a0001c0001t0028	10	HG01099.hp2 HG01891.hp2 HG02027.hp2 others(7): Show HG01099.hp2 HG01891.hp2 HG02027.hp2 HG02523.hp1 HG03491.hp2 HG03831.hp1 NA18963.hp1 NA19077.hp1 NA19087.hp1 NA20805.hp1	3_prime_UTR_variant	MODIFIER	c.3458dupA c.3458dupA	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	3458	chr1	26876218
chr1:26876277	G G	A A	1	a0004c0008t0012 a0004c0008t0012	1	NA21309.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.3400C>T c.3400C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	3400	chr1	26876277
chr1:26876301	C C	T T	1	a0005c0009t0018 a0005c0009t0018	1	HG01891.hp1 HG01891.hp1	3_prime_UTR_variant	MODIFIER	c.3376G>A c.3376G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	3376	chr1	26876301
chr1:26876493	C C	T T	2	a0003c0003t0005 a0003c0010t0005 a0003c0003t0005 a0003c0010t0005	6	HG02055.hp2 HG02109.hp1 HG02723.hp2 others(3): Show HG02055.hp2 HG02109.hp1 HG02723.hp2 HG02965.hp1 HG03041.hp2 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.3184G>A c.3184G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	3184	chr1	26876493
chr1:26876569	A A	T T	1	a0001c0001t0017 a0001c0001t0017	1	NA19077.hp2 NA19077.hp2	3_prime_UTR_variant	MODIFIER	c.3108T>A c.3108T>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	3108	chr1	26876569
chr1:26876913	C C	T T	1	a0001c0001t0016 a0001c0001t0016	1	NA18983.hp2 NA18983.hp2	3_prime_UTR_variant	MODIFIER	c.2764G>A c.2764G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	2764	chr1	26876913
chr1:26877045	A A	G G	1	a0001c0001t0008 a0001c0001t0008	2	HG03453.hp1 HG03579.hp2 HG03453.hp1 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.2632T>C c.2632T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	2632	chr1	26877045
chr1:26877237	A A	T T	3	a0001c0001t0004 a0001c0001t0021 a0001c0001t0028 a0001c0001t0004 a0001c0001t0021 a0001c0001t0028	10	HG00280.hp1 HG01070.hp2 HG01256.hp1 others(7): Show HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01258.hp2 HG01516.hp2 HG01981.hp2 HG03017.hp1 HG03041.hp1 NA20752.hp2 NA20805.hp1	3_prime_UTR_variant	MODIFIER	c.2440T>A c.2440T>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	2440	chr1	26877237
chr1:26877268	G G	A A	2	a0001c0006t0013 a0001c0006t0027 a0001c0006t0013 a0001c0006t0027	2	HG02109.hp2 HG02818.hp2 HG02109.hp2 HG02818.hp2	3_prime_UTR_variant	MODIFIER	c.2409C>T c.2409C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	2409	chr1	26877268
chr1:26877382	C C	A A	4	a0001c0001t0003 a0001c0001t0023 a0001c0005t0006 others(1): Show a0001c0001t0003 a0001c0001t0023 a0001c0005t0006 a0004c0008t0012	12	HG00099.hp1 HG01256.hp2 HG01257.hp2 others(9): Show HG00099.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01981.hp1 HG02602.hp1 HG02809.hp2 HG02976.hp2 HG03098.hp1 HG03579.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.2295G>T c.2295G>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	2295	chr1	26877382
chr1:26877653	C C	T T	1	a0001c0001t0015 a0001c0001t0015	1	NA19084.hp1 NA19084.hp1	3_prime_UTR_variant	MODIFIER	c.2024G>A c.2024G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	2024	chr1	26877653
chr1:26877692	T T	C C	8	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 others(5): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0028 a0001c0005t0006 a0004c0008t0012	23	HG00099.hp1 HG00280.hp1 HG01070.hp2 others(20): Show HG00099.hp1 HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01981.hp1 HG01981.hp2 HG02602.hp1 HG02809.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03579.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1985A>G c.1985A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1985	chr1	26877692
chr1:26877832	A A	G G	2	a0001c0006t0013 a0001c0006t0027 a0001c0006t0013 a0001c0006t0027	2	HG02109.hp2 HG02818.hp2 HG02109.hp2 HG02818.hp2	3_prime_UTR_variant	MODIFIER	c.1845T>C c.1845T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1845	chr1	26877832
chr1:26877973	A A	G G	1	a0001c0007t0007 a0001c0007t0007	2	HG03491.hp1 HG03492.hp1 HG03491.hp1 HG03492.hp1	3_prime_UTR_variant	MODIFIER	c.1704T>C c.1704T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1704	chr1	26877973
chr1:26878194	A A	G G	1	a0001c0001t0014 a0001c0001t0014	1	HG01106.hp2 HG01106.hp2	3_prime_UTR_variant	MODIFIER	c.1483T>C c.1483T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1483	chr1	26878194
chr1:26878425	G G	A A	1	a0001c0001t0023 a0001c0001t0023	1	HG01981.hp1 HG01981.hp1	3_prime_UTR_variant	MODIFIER	c.1252C>T c.1252C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1252	chr1	26878425
chr1:26878427	G G	A A	1	a0001c0001t0024 a0001c0001t0024	1	HG03209.hp1 HG03209.hp1	3_prime_UTR_variant	MODIFIER	c.1250C>T c.1250C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1250	chr1	26878427
chr1:26878444	G G	A A	1	a0001c0001t0025 a0001c0001t0025	1	HG01243.hp2 HG01243.hp2	3_prime_UTR_variant	MODIFIER	c.1233C>T c.1233C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1233	chr1	26878444
chr1:26878592	T T	TTTTGAAG others(31): Show TTTTGAAGTACACCTTTTTTTTGAGACAAAGTCTCGCTC	1	a0001c0001t0026 a0001c0001t0026	1	HG03209.hp2 HG03209.hp2	3_prime_UTR_variant	MODIFIER	c.1047_1084dupGAGC others(34): Show c.1047_1084dupGAGCGAGACTTTGTCTCAAAAAAAAGGTGTACTT CAAA	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1084	chr1	26878592
chr1:26878627	G G	A A	2	a0001c0006t0013 a0001c0006t0027 a0001c0006t0013 a0001c0006t0027	2	HG02109.hp2 HG02818.hp2 HG02109.hp2 HG02818.hp2	3_prime_UTR_variant	MODIFIER	c.1050C>T c.1050C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	1050	chr1	26878627
chr1:26878735	C C	T T	1	a0001c0006t0013 a0001c0006t0013	1	HG02818.hp2 HG02818.hp2	3_prime_UTR_variant	MODIFIER	c.942G>A c.942G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	942	chr1	26878735
chr1:26878839	G G	A A	1	a0002c0002t0009 a0002c0002t0009	2	HG01099.hp1 HG01175.hp2 HG01099.hp1 HG01175.hp2	3_prime_UTR_variant	MODIFIER	c.838C>T c.838C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	838	chr1	26878839
chr1:26878951	C C	T T	1	a0001c0005t0006 a0001c0005t0006	2	HG02976.hp2 HG03098.hp1 HG02976.hp2 HG03098.hp1	3_prime_UTR_variant	MODIFIER	c.726G>A c.726G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	726	chr1	26878951
chr1:26879195	C C	T T	1	a0004c0008t0012 a0004c0008t0012	1	NA21309.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.482G>A c.482G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	482	chr1	26879195
chr1:26879233	G G	A A	2	a0003c0003t0005 a0003c0010t0005 a0003c0003t0005 a0003c0010t0005	6	HG02055.hp2 HG02109.hp1 HG02723.hp2 others(3): Show HG02055.hp2 HG02109.hp1 HG02723.hp2 HG02965.hp1 HG03041.hp2 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.444C>T c.444C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	444	chr1	26879233
chr1:26879481	G G	A A	1	a0001c0001t0010 a0001c0001t0010	2	HG02071.hp1 HG02074.hp1 HG02071.hp1 HG02074.hp1	3_prime_UTR_variant	MODIFIER	c.196C>T c.196C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	5/5	196	chr1	26879481
chr1:26890178	G G	A A	4	a0001c0001t0004 a0001c0001t0028 a0003c0003t0005 others(1): Show a0001c0001t0004 a0001c0001t0028 a0003c0003t0005 a0003c0010t0005	15	HG00280.hp1 HG01070.hp2 HG01256.hp1 others(12): Show HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01258.hp2 HG01516.hp2 HG02055.hp2 HG02109.hp1 HG02723.hp2 HG02965.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 NA20300.hp1 NA20752.hp2 NA20805.hp1	5_prime_UTR_variant	MODIFIER	c.-82C>T c.-82C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	1/5	82	chr1	26890178
chr1:26890246	C C	G G	1	a0001c0001t0011 a0001c0001t0011	1	HG02040.hp1 HG02040.hp1	5_prime_UTR_variant	MODIFIER	c.-150G>C c.-150G>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	1/5	150	chr1	26890246

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr1:26879843	C C	T T	1	a0001c0001t0001g0053 a0001c0001t0001g0053	1	NA19087.hp2 NA19087.hp2	intron_variant	MODIFIER	c.861-94G>A c.861-94G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26879843
chr1:26879898	T T	G G	1	a0001c0001t0001g0060 a0001c0001t0001g0060	1	HG02015.hp2 HG02015.hp2	intron_variant	MODIFIER	c.861-149A>C c.861-149A>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26879898
chr1:26880121	T T	C C	2	a0001c0001t0001g0005 a0001c0001t0001g0032 a0001c0001t0001g0005 a0001c0001t0001g0032	9	HG01070.hp1 HG01071.hp2 HG02559.hp1 others(6): Show HG01070.hp1 HG01071.hp2 HG02559.hp1 HG02630.hp1 HG02723.hp1 HG02922.hp2 HG03130.hp2 NA19030.hp1 NA20129.hp1	intron_variant	MODIFIER	c.861-372A>G c.861-372A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880121
chr1:26880310	G G	T T	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	NA18982.hp2 NA18982.hp2	intron_variant	MODIFIER	c.861-561C>A c.861-561C>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880310
chr1:26880336	C C	T T	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.861-587G>A c.861-587G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880336
chr1:26880337	A A	G G	83	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(80): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0002g0006 a0001c0001t0002g0059 a0001c0001t0002g0065 a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0008g0014 a0001c0001t0010g0015 a0001c0001t0011g0022 a0001c0001t0014g0080 a0001c0001t0015g0054 a0001c0001t0016g0055 a0001c0001t0017g0081 a0001c0001t0019g0050 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0024g0056 a0001c0001t0025g0057 a0001c0001t0026g0058 a0001c0001t0028g0083 a0001c0004t0001g0018 a0001c0004t0001g0035 a0001c0004t0001g0064 a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0006t0013g0030 a0001c0006t0027g0028 a0001c0007t0007g0021 a0002c0002t0001g0003 a0002c0002t0001g0011 a0002c0002t0001g0036 a0002c0002t0001g0037 a0002c0002t0009g0045 a0002c0002t0009g0071 a0002c0002t0020g0044 a0003c0003t0005g0012 a0003c0003t0005g0085 a0003c0010t0005g0084 a0004c0008t0012g0025 a0005c0009t0018g0076	255	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(252): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18944.hp1 NA18944.hp2 NA18952.hp1 NA18952.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18989.hp1 NA18989.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19005.hp1 NA19005.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19077.hp1 NA19077.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.861-588T>C c.861-588T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880337
chr1:26880374	G G	A A	1	a0002c0002t0001g0011 a0002c0002t0001g0011	4	HG00140.hp2 HG00642.hp1 HG01517.hp1 others(1): Show HG00140.hp2 HG00642.hp1 HG01517.hp1 HG04204.hp2	intron_variant	MODIFIER	c.861-625C>T c.861-625C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880374
chr1:26880554	G G	A A	1	a0005c0009t0018g0076 a0005c0009t0018g0076	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.861-805C>T c.861-805C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880554
chr1:26880586	C C	T T	1	a0001c0001t0002g0065 a0001c0001t0002g0065	1	HG01891.hp2 HG01891.hp2	intron_variant	MODIFIER	c.861-837G>A c.861-837G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880586
chr1:26880601	A A	G G	10	a0001c0001t0001g0002 a0001c0001t0001g0031 a0001c0001t0001g0038 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0031 a0001c0001t0001g0038 a0001c0001t0001g0041 a0001c0001t0001g0047 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0074 a0001c0001t0019g0050 a0001c0007t0007g0021	35	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(32): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00558.hp1 HG00741.hp2 HG01192.hp1 HG01255.hp1 HG01361.hp1 HG02004.hp1 HG02451.hp1 HG02572.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03654.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03942.hp2 HG04199.hp1 NA18522.hp1 NA18906.hp2 NA18997.hp1 NA18998.hp1 NA19005.hp2 NA19056.hp1 NA19090.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.861-852T>C c.861-852T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880601
chr1:26880620	T T	C C	1	a0001c0001t0002g0059 a0001c0001t0002g0059	1	HG02027.hp2 HG02027.hp2	intron_variant	MODIFIER	c.861-871A>G c.861-871A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880620
chr1:26880827	A A	ATATAC ATATAC	13	a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 others(10): Show a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0028g0083 a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0006t0013g0030 a0001c0006t0027g0028 a0004c0008t0012g0025 a0005c0009t0018g0076	26	HG00099.hp1 HG00280.hp1 HG01070.hp2 others(23): Show HG00099.hp1 HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01981.hp1 HG01981.hp2 HG02109.hp2 HG02602.hp1 HG02809.hp2 HG02818.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03579.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.861-1079_861-1078i others(7): Show c.861-1079_861-1078insGTATA	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26880827
chr1:26881108	C C	T T	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG00621.hp1 HG00621.hp1	intron_variant	MODIFIER	c.861-1359G>A c.861-1359G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26881108
chr1:26881229	C C	T T	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.861-1480G>A c.861-1480G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26881229
chr1:26881428	A A	G G	1	a0002c0002t0009g0071 a0002c0002t0009g0071	1	HG01175.hp2 HG01175.hp2	intron_variant	MODIFIER	c.861-1679T>C c.861-1679T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26881428
chr1:26881867	A A	G G	2	a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0005t0006g0023 a0001c0005t0006g0026	2	HG02976.hp2 HG03098.hp1 HG02976.hp2 HG03098.hp1	intron_variant	MODIFIER	c.861-2118T>C c.861-2118T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26881867
chr1:26881893	G G	A A	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.861-2144C>T c.861-2144C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26881893
chr1:26882074	G G	A A	1	a0001c0001t0001g0060 a0001c0001t0001g0060	1	HG02015.hp2 HG02015.hp2	intron_variant	MODIFIER	c.860+2086C>T c.860+2086C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882074
chr1:26882193	G G	A A	2	a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0005t0006g0023 a0001c0005t0006g0026	2	HG02976.hp2 HG03098.hp1 HG02976.hp2 HG03098.hp1	intron_variant	MODIFIER	c.860+1967C>T c.860+1967C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882193
chr1:26882211	C C	G G	2	a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0005t0006g0023 a0001c0005t0006g0026	2	HG02976.hp2 HG03098.hp1 HG02976.hp2 HG03098.hp1	intron_variant	MODIFIER	c.860+1949G>C c.860+1949G>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882211
chr1:26882213	G G	A A	1	a0001c0001t0001g0016 a0001c0001t0001g0016	2	HG01243.hp1 HG03540.hp1 HG01243.hp1 HG03540.hp1	intron_variant	MODIFIER	c.860+1947C>T c.860+1947C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882213
chr1:26882217	C C	CA CA	6	a0001c0001t0001g0005 a0001c0001t0001g0017 a0001c0001t0001g0032 others(3): Show a0001c0001t0001g0005 a0001c0001t0001g0017 a0001c0001t0001g0032 a0001c0001t0001g0043 a0001c0004t0001g0064 a0001c0006t0013g0030	14	HG01070.hp1 HG01071.hp2 HG02071.hp2 others(11): Show HG01070.hp1 HG01071.hp2 HG02071.hp2 HG02559.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02818.hp2 HG02922.hp2 HG03130.hp2 NA19030.hp1 NA19056.hp2 NA20129.hp1	intron_variant	MODIFIER	c.860+1942dupT c.860+1942dupT	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882217
chr1:26882219	A A	T T	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG00099.hp2 HG00099.hp2	intron_variant	MODIFIER	c.860+1941T>A c.860+1941T>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882219
chr1:26882408	A A	T T	1	a0001c0001t0023g0027 a0001c0001t0023g0027	1	HG01981.hp1 HG01981.hp1	intron_variant	MODIFIER	c.860+1752T>A c.860+1752T>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882408
chr1:26882675	G G	T T	5	a0001c0001t0003g0004 a0001c0001t0023g0027 a0001c0005t0006g0023 others(2): Show a0001c0001t0003g0004 a0001c0001t0023g0027 a0001c0005t0006g0023 a0001c0005t0006g0026 a0004c0008t0012g0025	12	HG00099.hp1 HG01256.hp2 HG01257.hp2 others(9): Show HG00099.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01981.hp1 HG02602.hp1 HG02809.hp2 HG02976.hp2 HG03098.hp1 HG03579.hp1 NA21309.hp1	intron_variant	MODIFIER	c.860+1485C>A c.860+1485C>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882675
chr1:26882818	G G	T T	1	a0005c0009t0018g0076 a0005c0009t0018g0076	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.860+1342C>A c.860+1342C>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882818
chr1:26882857	T T	C C	2	a0001c0001t0001g0061 a0005c0009t0018g0076 a0001c0001t0001g0061 a0005c0009t0018g0076	2	HG01891.hp1 NA18612.hp1 HG01891.hp1 NA18612.hp1	intron_variant	MODIFIER	c.860+1303A>G c.860+1303A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882857
chr1:26882948	A A	G G	10	a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 others(7): Show a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0028g0083 a0001c0005t0006g0023 a0001c0005t0006g0026 a0004c0008t0012g0025	23	HG00099.hp1 HG00280.hp1 HG01070.hp2 others(20): Show HG00099.hp1 HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01981.hp1 HG01981.hp2 HG02602.hp1 HG02809.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03579.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.860+1212T>C c.860+1212T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26882948
chr1:26883314	G G	GC GC	16	a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032 others(13): Show a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0028g0083 a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0006t0013g0030 a0001c0006t0027g0028 a0004c0008t0012g0025 a0005c0009t0018g0076	36	HG00099.hp1 HG00280.hp1 HG01070.hp1 others(33): Show HG00099.hp1 HG00280.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01981.hp1 HG01981.hp2 HG02109.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03579.hp1 NA18522.hp1 NA19030.hp1 NA20129.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.860+845_860+846ins others(1): Show c.860+845_860+846insG	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26883314
chr1:26883331	C C	G G	3	a0001c0001t0001g0008 a0001c0001t0001g0066 a0001c0001t0002g0065 a0001c0001t0001g0008 a0001c0001t0001g0066 a0001c0001t0002g0065	8	HG01884.hp2 HG01891.hp2 HG02258.hp2 others(5): Show HG01884.hp2 HG01891.hp2 HG02258.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp2 HG03139.hp1 HG03471.hp2	intron_variant	MODIFIER	c.860+829G>C c.860+829G>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26883331
chr1:26883692	G G	A A	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG03704.hp1 HG03704.hp1	intron_variant	MODIFIER	c.860+468C>T c.860+468C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26883692
chr1:26883858	G G	A A	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.860+302C>T c.860+302C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26883858
chr1:26883970	G G	T T	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.860+190C>A c.860+190C>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26883970
chr1:26884022	A A	G G	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	HG04204.hp1 HG04204.hp1	intron_variant	MODIFIER	c.860+138T>C c.860+138T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	4/4	chr1	26884022
chr1:26884370	C C	T T	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG02572.hp2 HG02572.hp2	intron_variant	MODIFIER	c.730-80G>A c.730-80G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26884370
chr1:26884373	C C	T T	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	NA18962.hp2 NA18962.hp2	intron_variant	MODIFIER	c.730-83G>A c.730-83G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26884373
chr1:26884663	C C	T T	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG02735.hp2 HG02735.hp2	intron_variant	MODIFIER	c.730-373G>A c.730-373G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26884663
chr1:26884886	G G	A A	3	a0001c0001t0001g0008 a0001c0001t0001g0066 a0001c0001t0002g0065 a0001c0001t0001g0008 a0001c0001t0001g0066 a0001c0001t0002g0065	8	HG01884.hp2 HG01891.hp2 HG02258.hp2 others(5): Show HG01884.hp2 HG01891.hp2 HG02258.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp2 HG03139.hp1 HG03471.hp2	intron_variant	MODIFIER	c.730-596C>T c.730-596C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26884886
chr1:26884975	C C	A A	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	NA18522.hp1 NA18522.hp1	intron_variant	MODIFIER	c.730-685G>T c.730-685G>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26884975
chr1:26884992	C C	T T	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.730-702G>A c.730-702G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26884992
chr1:26885578	C C	CT CT	9	a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0070 others(6): Show a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0070 a0002c0002t0001g0037 a0002c0002t0001g0069 a0003c0003t0005g0012 a0003c0003t0005g0085 a0003c0010t0005g0084 a0005c0009t0018g0076	12	HG01175.hp1 HG01433.hp2 HG01891.hp1 others(9): Show HG01175.hp1 HG01433.hp2 HG01891.hp1 HG02055.hp2 HG02109.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02965.hp1 HG03041.hp2 NA20300.hp1 NA20905.hp2	intron_variant	MODIFIER	c.729+394dupA c.729+394dupA	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26885578
chr1:26885578	CT CT	C C	4	a0001c0001t0001g0067 a0001c0001t0003g0004 a0001c0001t0023g0027 others(1): Show a0001c0001t0001g0067 a0001c0001t0003g0004 a0001c0001t0023g0027 a0001c0006t0027g0028	11	HG00099.hp1 HG01256.hp2 HG01257.hp2 others(8): Show HG00099.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01981.hp1 HG02109.hp2 HG02602.hp1 HG02809.hp2 HG03098.hp2 HG03579.hp1	intron_variant	MODIFIER	c.729+394delA c.729+394delA	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26885578
chr1:26885718	T T	C C	5	a0001c0001t0003g0004 a0001c0001t0023g0027 a0001c0005t0006g0023 others(2): Show a0001c0001t0003g0004 a0001c0001t0023g0027 a0001c0005t0006g0023 a0001c0005t0006g0026 a0004c0008t0012g0025	12	HG00099.hp1 HG01256.hp2 HG01257.hp2 others(9): Show HG00099.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01981.hp1 HG02602.hp1 HG02809.hp2 HG02976.hp2 HG03098.hp1 HG03579.hp1 NA21309.hp1	intron_variant	MODIFIER	c.729+255A>G c.729+255A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26885718
chr1:26885736	C C	T T	1	a0005c0009t0018g0076 a0005c0009t0018g0076	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.729+237G>A c.729+237G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26885736
chr1:26885748	T T	C C	10	a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 others(7): Show a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0028g0083 a0001c0005t0006g0023 a0001c0005t0006g0026 a0004c0008t0012g0025	23	HG00099.hp1 HG00280.hp1 HG01070.hp2 others(20): Show HG00099.hp1 HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01981.hp1 HG01981.hp2 HG02602.hp1 HG02809.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03579.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.729+225A>G c.729+225A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26885748
chr1:26885871	G G	A A	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.729+102C>T c.729+102C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	3/4	chr1	26885871
chr1:26886210	T T	C C	3	a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032	10	HG01070.hp1 HG01071.hp2 HG02559.hp1 others(7): Show HG01070.hp1 HG01071.hp2 HG02559.hp1 HG02630.hp1 HG02723.hp1 HG02922.hp2 HG03130.hp2 NA18522.hp1 NA19030.hp1 NA20129.hp1	intron_variant	MODIFIER	c.569-77A>G c.569-77A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26886210
chr1:26886550	T T	C C	16	a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032 others(13): Show a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0028g0083 a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0006t0013g0030 a0001c0006t0027g0028 a0004c0008t0012g0025 a0005c0009t0018g0076	36	HG00099.hp1 HG00280.hp1 HG01070.hp1 others(33): Show HG00099.hp1 HG00280.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01981.hp1 HG01981.hp2 HG02109.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03579.hp1 NA18522.hp1 NA19030.hp1 NA20129.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.569-417A>G c.569-417A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26886550
chr1:26886588	A A	G G	11	a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 others(8): Show a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0028g0083 a0001c0005t0006g0023 a0001c0005t0006g0026 a0004c0008t0012g0025 a0005c0009t0018g0076	24	HG00099.hp1 HG00280.hp1 HG01070.hp2 others(21): Show HG00099.hp1 HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01981.hp1 HG01981.hp2 HG02602.hp1 HG02809.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03579.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.569-455T>C c.569-455T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26886588
chr1:26886610	A A	T T	1	a0002c0002t0001g0036 a0002c0002t0001g0036	1	HG02280.hp1 HG02280.hp1	intron_variant	MODIFIER	c.569-477T>A c.569-477T>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26886610
chr1:26886643	C C	G G	1	a0001c0004t0001g0035 a0001c0004t0001g0035	1	HG00408.hp2 HG00408.hp2	intron_variant	MODIFIER	c.569-510G>C c.569-510G>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26886643
chr1:26886871	T T	C C	4	a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 others(1): Show a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0028g0083	10	HG00280.hp1 HG01070.hp2 HG01256.hp1 others(7): Show HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01258.hp2 HG01516.hp2 HG01981.hp2 HG03017.hp1 HG03041.hp1 NA20752.hp2 NA20805.hp1	intron_variant	MODIFIER	c.569-738A>G c.569-738A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26886871
chr1:26886993	CA CA	C C	65	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 others(62): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0002g0006 a0001c0001t0002g0059 a0001c0001t0002g0065 a0001c0001t0004g0082 a0001c0001t0008g0014 a0001c0001t0010g0015 a0001c0001t0011g0022 a0001c0001t0014g0080 a0001c0001t0015g0054 a0001c0001t0016g0055 a0001c0001t0017g0081 a0001c0001t0019g0050 a0001c0001t0024g0056 a0001c0001t0025g0057 a0001c0001t0026g0058 a0001c0004t0001g0018 a0001c0004t0001g0035 a0001c0004t0001g0064 a0001c0006t0013g0030 a0001c0006t0027g0028 a0001c0007t0007g0021 a0002c0002t0001g0003 a0002c0002t0001g0011 a0002c0002t0001g0036 a0002c0002t0001g0037 a0002c0002t0009g0045 a0002c0002t0020g0044 a0003c0003t0005g0012 a0003c0010t0005g0084	216	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(213): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02965.hp1 HG02976.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18944.hp1 NA18944.hp2 NA18952.hp1 NA18952.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18989.hp1 NA18989.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19005.hp1 NA19005.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19077.hp1 NA19077.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.569-861delT c.569-861delT	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26886993
chr1:26886993	CAA CAA	C C	6	a0001c0001t0001g0013 a0001c0001t0001g0034 a0001c0001t0003g0004 others(3): Show a0001c0001t0001g0013 a0001c0001t0001g0034 a0001c0001t0003g0004 a0001c0001t0023g0027 a0001c0005t0006g0026 a0004c0008t0012g0025	14	HG00099.hp1 HG01069.hp2 HG01256.hp2 others(11): Show HG00099.hp1 HG01069.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG02602.hp1 HG02809.hp2 HG03098.hp1 HG03579.hp1 NA21309.hp1	intron_variant	MODIFIER	c.569-862_569-861del others(2): Show c.569-862_569-861delTT	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26886993
chr1:26887015	A A	G G	1	a0002c0002t0001g0011 a0002c0002t0001g0011	4	HG00140.hp2 HG00642.hp1 HG01517.hp1 others(1): Show HG00140.hp2 HG00642.hp1 HG01517.hp1 HG04204.hp2	intron_variant	MODIFIER	c.569-882T>C c.569-882T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887015
chr1:26887131	G G	A A	1	a0001c0001t0001g0073 a0001c0001t0001g0073	1	NA18969.hp2 NA18969.hp2	intron_variant	MODIFIER	c.569-998C>T c.569-998C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887131
chr1:26887169	G G	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	2	HG02818.hp1 HG06807.hp1 HG02818.hp1 HG06807.hp1	intron_variant	MODIFIER	c.569-1036C>T c.569-1036C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887169
chr1:26887179	T T	C C	1	a0005c0009t0018g0076 a0005c0009t0018g0076	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.569-1046A>G c.569-1046A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887179
chr1:26887248	G G	A A	1	a0001c0006t0013g0030 a0001c0006t0013g0030	1	HG02818.hp2 HG02818.hp2	intron_variant	MODIFIER	c.569-1115C>T c.569-1115C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887248
chr1:26887539	A A	G G	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	HG01106.hp1 HG01106.hp1	intron_variant	MODIFIER	c.569-1406T>C c.569-1406T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887539
chr1:26887601	G G	A A	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	NA19090.hp1 NA19090.hp1	intron_variant	MODIFIER	c.568+1368C>T c.568+1368C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887601
chr1:26887623	A A	G G	16	a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032 others(13): Show a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0028g0083 a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0006t0013g0030 a0001c0006t0027g0028 a0004c0008t0012g0025 a0005c0009t0018g0076	36	HG00099.hp1 HG00280.hp1 HG01070.hp1 others(33): Show HG00099.hp1 HG00280.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01981.hp1 HG01981.hp2 HG02109.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03579.hp1 NA18522.hp1 NA19030.hp1 NA20129.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.568+1346T>C c.568+1346T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887623
chr1:26887672	C C	T T	3	a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0005 a0001c0001t0001g0031 a0001c0001t0001g0032	10	HG01070.hp1 HG01071.hp2 HG02559.hp1 others(7): Show HG01070.hp1 HG01071.hp2 HG02559.hp1 HG02630.hp1 HG02723.hp1 HG02922.hp2 HG03130.hp2 NA18522.hp1 NA19030.hp1 NA20129.hp1	intron_variant	MODIFIER	c.568+1297G>A c.568+1297G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887672
chr1:26887754	A A	G G	13	a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 others(10): Show a0001c0001t0003g0004 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0021g0029 a0001c0001t0022g0075 a0001c0001t0023g0027 a0001c0001t0028g0083 a0001c0005t0006g0023 a0001c0005t0006g0026 a0001c0006t0013g0030 a0001c0006t0027g0028 a0004c0008t0012g0025 a0005c0009t0018g0076	26	HG00099.hp1 HG00280.hp1 HG01070.hp2 others(23): Show HG00099.hp1 HG00280.hp1 HG01070.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01981.hp1 HG01981.hp2 HG02109.hp2 HG02602.hp1 HG02809.hp2 HG02818.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03579.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.568+1215T>C c.568+1215T>C	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887754
chr1:26887863	A A	AT AT	3	a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0008g0014 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0008g0014	9	HG01975.hp1 HG01975.hp2 HG02055.hp1 others(6): Show HG01975.hp1 HG01975.hp2 HG02055.hp1 HG02293.hp1 HG02293.hp2 HG02976.hp1 HG03453.hp1 HG03579.hp2 NA19030.hp2	intron_variant	MODIFIER	c.568+1105dupA c.568+1105dupA	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887863
chr1:26887863	A A	ATT ATT	1	a0001c0001t0001g0009 a0001c0001t0001g0009	5	HG01261.hp1 HG01358.hp1 HG01358.hp2 others(2): Show HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01496.hp2 HG02004.hp2	intron_variant	MODIFIER	c.568+1104_568+1105d others(4): Show c.568+1104_568+1105dupAA	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26887863
chr1:26888159	C C	T T	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	NA18966.hp1 NA18966.hp1	intron_variant	MODIFIER	c.568+810G>A c.568+810G>A	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26888159
chr1:26888588	T T	C C	6	a0001c0001t0001g0077 a0001c0001t0004g0007 a0001c0001t0004g0082 others(3): Show a0001c0001t0001g0077 a0001c0001t0004g0007 a0001c0001t0004g0082 a0001c0001t0022g0075 a0001c0001t0028g0083 a0005c0009t0018g0076	12	HG00280.hp1 HG01069.hp1 HG01070.hp2 others(9): Show HG00280.hp1 HG01069.hp1 HG01070.hp2 HG01256.hp1 HG01258.hp2 HG01516.hp2 HG01891.hp1 HG02965.hp2 HG03017.hp1 HG03041.hp1 NA20752.hp2 NA20805.hp1	intron_variant	MODIFIER	c.568+381A>G c.568+381A>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26888588
chr1:26888618	G G	C C	1	a0001c0001t0001g0078 a0001c0001t0001g0078	1	HG01167.hp1 HG01167.hp1	intron_variant	MODIFIER	c.568+351C>G c.568+351C>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26888618
chr1:26888761	A A	C C	1	a0001c0005t0006g0023 a0001c0005t0006g0023	1	HG02976.hp2 HG02976.hp2	intron_variant	MODIFIER	c.568+208T>G c.568+208T>G	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26888761
chr1:26888800	G G	A A	1	a0001c0001t0001g0079 a0001c0001t0001g0079	1	HG02155.hp1 HG02155.hp1	intron_variant	MODIFIER	c.568+169C>T c.568+169C>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	2/4	chr1	26888800
chr1:26889297	T T	A A	1	a0001c0001t0014g0080 a0001c0001t0014g0080	1	HG01106.hp2 HG01106.hp2	intron_variant	MODIFIER	c.412-172A>T c.412-172A>T	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	1/4	chr1	26889297
chr1:26889356	GGCATCTG others(15): Show GGCATCTGACTCCACTCTTTCAT	G G	1	a0001c0001t0017g0081 a0001c0001t0017g0081	1	NA19077.hp2 NA19077.hp2	intron_variant	MODIFIER	c.412-253_412-232del others(22): Show c.412-253_412-232delATGAAAGAGTGGAGTCAGATGC	GPN2	ENSG00000142751.15	transcript	ENST00000374135.9	protein_coding	1/4	chr1	26889356

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🧬 JoGo Online Haplotype Explorer GPN2_chr1_26871132_26895283

JoGo Local Haplotype Explorer (on iGV) GPN2_chr1_26871132_26895283

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 10)

TTranscript Level Haplotype Info (Total: 28)

GGenebody Level Haplotype Info (Total: 85)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 10)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 31)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 85)

Haplotype Details by Sample (Haploid Level) (Total: 258)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (Synonymous Mutations) (Total: 6)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 30)

GGenebody Level Haplotype Variants (Intron) (Total: 73)

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Annotation (Repeats)

Annotation (SNP Array)