Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	3159
ensemblid	ENSG00000137309.21
hgncid	5010
symbol	HMGA1
name	high mobility group AT-hook 1
refseq_nuc	NM_145899.3
refseq_prot	NP_665906.1
ensembl_nuc	ENST00000311487.9
ensembl_prot	ENSP00000308227.4
mane_status	MANE Select
chr	chr6
start	34236873
end	34246231
strand	+
ver	v1.2
region	chr6:34236873-34246231
region5000	chr6:34231873-34251231
regionname0	HMGA1_chr6_34236873_34246231
regionname5000	HMGA1_chr6_34231873_34251231

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	107	322	92	68	114	14	32	80	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	324	314	84	68	114	14	32	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
c0002	0/0	324	7	7	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
c0003	0/0	324	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	1597	273	79	61	93	10	29	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0002	0/0	1597	14	1	0	13	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0003	1/0	1597	8	6	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0004	0/0	1597	6	0	0	6	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0005	0/0	1597	5	0	1	0	4	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0006	0/0	1597	3	3	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0007	0/0	1597	2	0	0	1	0	1	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0008	0/0	1597	2	0	2	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0009	0/0	1597	2	1	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0010	0/0	1597	2	2	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0011	0/0	1597	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0012	0/0	1597	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0013	0/0	1597	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0014	0/0	1597	1	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
t0015	0/0	1597	1	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	132	20	26	58	8	20	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0002	0/0	20	1	13	6	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0003	0/0	9	8	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0004	0/0	9	5	0	4	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0005	0/0	8	0	1	6	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0006	0/0	8	0	0	8	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0007	0/0	7	7	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0008	0/0	6	0	2	1	0	3	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0009	0/0	6	5	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0010	0/0	5	5	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0011	0/0	5	5	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0012	0/0	5	5	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0013	0/0	4	0	1	0	3	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0014	0/0	4	0	4	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0015	0/0	4	0	0	4	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0016	0/0	4	3	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0017	1/0	3	1	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0018	0/0	3	2	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0019	0/0	3	0	2	0	1	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0020	0/0	3	0	1	0	1	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0021	0/0	3	3	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0022	0/0	3	0	2	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0023	0/0	2	1	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0024	0/0	2	0	0	1	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0025	0/1	2	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0026	0/0	2	0	1	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0027	0/0	2	0	0	2	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0028	0/0	2	2	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0029	0/0	2	2	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0030	0/0	2	0	2	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0031	0/0	2	0	2	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0032	0/0	2	0	0	2	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0033	0/0	2	0	0	0	0	2	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0034	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0035	0/0	1	0	0	0	1	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0036	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0037	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0038	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0039	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0040	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0041	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0042	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0043	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0044	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0045	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0046	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0047	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0048	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0049	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0050	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0051	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0052	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0053	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0054	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0055	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0056	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0057	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0058	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0059	0/0	1	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0060	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0061	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0062	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0063	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0064	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0065	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0066	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0067	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0068	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0069	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0070	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0071	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0072	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0073	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0074	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0075	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0076	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0077	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0078	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
g0079	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	324	314	84	68	114	14	32	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0002	0/0	324	7	7	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0003	0/0	324	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	1920	272	78	61	93	10	29	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0002	0/0	1920	14	1	0	13	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0003	1/0	1920	3	1	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0004	0/0	1920	6	0	0	6	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0005	0/0	1920	5	0	1	0	4	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0006	0/0	1920	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0007	0/0	1920	2	0	0	1	0	1	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0008	0/0	1920	2	0	2	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0009	0/0	1920	2	1	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0010	0/0	1920	2	2	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0011	0/0	1920	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0012	0/0	1920	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0013	0/0	1920	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0014	0/0	1920	1	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0001t0015	0/0	1920	1	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0002t0003	0/0	1920	5	5	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0002t0006	0/0	1920	2	2	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231
a0001c0003t0001	0/0	1920	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	copy fasta	chr6	34231873	34251231

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	119	20	25	47	8	19	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0002	0/0	20	1	13	6	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0003	0/0	9	8	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0004	0/0	9	5	0	4	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0005	0/0	8	0	1	6	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0006	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0008	0/0	6	0	2	1	0	3	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0009	0/0	6	5	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0010	0/0	5	5	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0011	0/0	5	5	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0012	0/0	4	4	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0014	0/0	4	0	4	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0015	0/0	4	0	0	4	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0016	0/0	4	3	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0018	0/0	3	2	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0019	0/0	2	0	1	0	1	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0020	0/0	3	0	1	0	1	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0021	0/0	3	3	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0022	0/0	3	0	2	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0025	0/1	2	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0026	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0027	0/0	2	0	0	2	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0028	0/0	2	2	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0029	0/0	2	2	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0030	0/0	2	0	2	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0032	0/0	2	0	0	2	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0033	0/0	2	0	0	0	0	2	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0034	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0038	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0039	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0041	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0042	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0043	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0045	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0046	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0047	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0048	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0049	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0050	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0051	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0052	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0053	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0054	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0055	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0056	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0057	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0058	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0059	0/0	1	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0061	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0062	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0063	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0064	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0066	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0070	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0071	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0072	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0073	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0074	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0075	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0077	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0078	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0001g0079	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0002g0001	0/0	6	0	0	6	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0002g0006	0/0	7	0	0	7	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0002g0067	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0003g0017	1/0	3	1	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0004g0001	0/0	4	0	0	4	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0004g0060	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0004g0065	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0005g0013	0/0	4	0	1	0	3	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0005g0035	0/0	1	0	0	0	1	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0006g0037	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0007g0024	0/0	2	0	0	1	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0008g0031	0/0	2	0	2	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0009g0023	0/0	2	1	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0010g0068	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0010g0069	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0011g0019	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0012g0001	0/0	1	0	0	1	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0013g0001	0/0	1	0	1	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0014g0001	0/0	1	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0001t0015g0026	0/0	1	0	0	0	0	1	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0002t0003g0007	0/0	5	5	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0002t0006g0007	0/0	2	2	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
a0001c0003t0001g0012	0/0	1	1	0	0	0	0	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00099	hp2	a0001	c0001	t0005	g0013	EUR	GBR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00140	hp2	a0001	c0001	t0005	g0013	EUR	GBR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00280	hp1	a0001	c0001	t0001	g0020	EUR	FIN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00408	hp2	a0001	c0001	t0001	g0056	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00423	hp1	a0001	c0001	t0001	g0044	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00423	hp2	a0001	c0001	t0001	g0005	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00558	hp2	a0001	c0001	t0004	g0001	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00597	hp1	a0001	c0001	t0001	g0005	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00597	hp2	a0001	c0001	t0001	g0005	EAS	CHS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00639	hp1	a0001	c0001	t0001	g0030	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00639	hp2	a0001	c0001	t0001	g0014	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00642	hp1	a0001	c0001	t0001	g0054	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00733	hp1	a0001	c0001	t0008	g0031	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00735	hp1	a0001	c0001	t0001	g0002	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00735	hp2	a0001	c0001	t0001	g0008	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG00741	hp2	a0001	c0001	t0003	g0017	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01069	hp1	a0001	c0001	t0001	g0020	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01069	hp2	a0001	c0001	t0001	g0014	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01071	hp1	a0001	c0001	t0001	g0014	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01081	hp2	a0001	c0001	t0005	g0013	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01099	hp1	a0001	c0001	t0001	g0008	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01109	hp1	a0001	c0001	t0001	g0016	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01109	hp2	a0001	c0001	t0001	g0072	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01167	hp2	a0001	c0001	t0001	g0002	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01168	hp2	a0001	c0001	t0011	g0019	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01175	hp1	a0001	c0001	t0001	g0018	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01175	hp2	a0001	c0001	t0001	g0019	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01192	hp1	a0001	c0001	t0008	g0031	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01255	hp1	a0001	c0001	t0001	g0038	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01255	hp2	a0001	c0001	t0009	g0023	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01257	hp1	a0001	c0001	t0001	g0002	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01257	hp2	a0001	c0001	t0001	g0046	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01358	hp1	a0001	c0001	t0001	g0049	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01358	hp2	a0001	c0001	t0001	g0002	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01361	hp2	a0001	c0001	t0001	g0014	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01433	hp2	a0001	c0001	t0001	g0022	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01496	hp1	a0001	c0001	t0001	g0005	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01496	hp2	a0001	c0001	t0001	g0002	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01515	hp1	a0001	c0001	t0005	g0035	EUR	IBS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01517	hp2	a0001	c0001	t0005	g0013	EUR	IBS	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01884	hp1	a0001	c0002	t0003	g0007	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01884	hp2	a0001	c0001	t0001	g0036	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01891	hp1	a0001	c0001	t0001	g0018	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01891	hp2	a0001	c0001	t0001	g0012	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01928	hp1	a0001	c0001	t0001	g0002	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01928	hp2	a0001	c0001	t0013	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01934	hp2	a0001	c0001	t0001	g0002	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01978	hp2	a0001	c0001	t0001	g0002	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01981	hp2	a0001	c0001	t0001	g0002	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02004	hp1	a0001	c0001	t0001	g0002	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02027	hp1	a0001	c0001	t0001	g0008	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02027	hp2	a0001	c0001	t0001	g0027	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02040	hp1	a0001	c0001	t0001	g0055	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02040	hp2	a0001	c0001	t0001	g0027	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02055	hp2	a0001	c0001	t0001	g0029	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02071	hp2	a0001	c0001	t0012	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02074	hp1	a0001	c0001	t0004	g0060	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02080	hp1	a0001	c0001	t0001	g0070	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02083	hp1	a0001	c0001	t0001	g0045	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02135	hp2	a0001	c0001	t0001	g0057	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02145	hp1	a0001	c0001	t0006	g0037	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02145	hp2	a0001	c0001	t0001	g0003	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02148	hp1	a0001	c0001	t0001	g0002	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02148	hp2	a0001	c0001	t0001	g0030	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02257	hp2	a0001	c0001	t0001	g0009	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02258	hp1	a0001	c0001	t0010	g0068	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02273	hp2	a0001	c0001	t0001	g0075	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02280	hp1	a0001	c0001	t0001	g0010	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02280	hp2	a0001	c0001	t0001	g0004	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02293	hp2	a0001	c0001	t0001	g0022	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02300	hp1	a0001	c0001	t0001	g0002	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02451	hp1	a0001	c0001	t0001	g0039	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02451	hp2	a0001	c0001	t0001	g0009	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02523	hp2	a0001	c0001	t0001	g0015	EAS	KHV	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02602	hp2	a0001	c0001	t0001	g0025	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02622	hp1	a0001	c0001	t0001	g0009	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02622	hp2	a0001	c0001	t0001	g0064	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02630	hp1	a0001	c0001	t0001	g0011	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02630	hp2	a0001	c0001	t0001	g0077	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02647	hp1	a0001	c0001	t0001	g0021	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02647	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02683	hp2	a0001	c0001	t0015	g0026	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02698	hp1	a0001	c0001	t0001	g0003	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02717	hp1	a0001	c0001	t0001	g0016	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02717	hp2	a0001	c0001	t0001	g0011	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02723	hp1	a0001	c0001	t0001	g0018	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02723	hp2	a0001	c0001	t0001	g0012	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02809	hp1	a0001	c0001	t0001	g0012	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02809	hp2	a0001	c0001	t0001	g0028	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02818	hp1	a0001	c0001	t0001	g0016	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02818	hp2	a0001	c0001	t0001	g0029	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02895	hp2	a0001	c0001	t0001	g0009	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02896	hp1	a0001	c0002	t0006	g0007	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02896	hp2	a0001	c0003	t0001	g0012	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02897	hp1	a0001	c0002	t0006	g0007	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02965	hp1	a0001	c0001	t0001	g0063	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02970	hp1	a0001	c0001	t0001	g0003	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02976	hp1	a0001	c0001	t0001	g0004	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02976	hp2	a0001	c0001	t0010	g0069	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03017	hp1	a0001	c0001	t0001	g0020	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03017	hp2	a0001	c0001	t0014	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03041	hp2	a0001	c0001	t0001	g0066	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03098	hp1	a0001	c0002	t0003	g0007	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03098	hp2	a0001	c0001	t0001	g0003	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03130	hp1	a0001	c0001	t0001	g0003	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03130	hp2	a0001	c0001	t0009	g0023	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03139	hp1	a0001	c0001	t0001	g0001	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03139	hp2	a0001	c0001	t0001	g0012	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03195	hp1	a0001	c0002	t0003	g0007	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03195	hp2	a0001	c0001	t0001	g0011	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03209	hp1	a0001	c0002	t0003	g0007	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03209	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03225	hp1	a0001	c0001	t0001	g0011	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03225	hp2	a0001	c0001	t0001	g0010	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03239	hp2	a0001	c0001	t0001	g0008	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03453	hp1	a0001	c0001	t0001	g0004	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03486	hp1	a0001	c0001	t0001	g0003	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03516	hp1	a0001	c0001	t0001	g0021	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03516	hp2	a0001	c0001	t0001	g0010	AFR	ESN	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03540	hp2	a0001	c0001	t0001	g0011	AFR	GWD	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03579	hp1	a0001	c0001	t0001	g0010	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03579	hp2	a0001	c0001	t0001	g0003	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03654	hp2	a0001	c0001	t0007	g0024	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03688	hp1	a0001	c0001	t0001	g0008	SAS	STU	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03704	hp2	a0001	c0001	t0001	g0033	SAS	PJL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03834	hp2	a0001	c0001	t0001	g0033	SAS	BEB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG04115	hp1	a0001	c0001	t0001	g0059	SAS	STU	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG04184	hp2	a0001	c0001	t0001	g0005	SAS	BEB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG04199	hp2	a0001	c0001	t0001	g0008	SAS	STU	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18522	hp1	a0001	c0001	t0001	g0010	AFR	YRI	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18522	hp2	a0001	c0001	t0001	g0004	AFR	YRI	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18906	hp1	a0001	c0001	t0001	g0062	AFR	YRI	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18941	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18942	hp2	a0001	c0001	t0001	g0078	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18944	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18944	hp2	a0001	c0001	t0001	g0022	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18946	hp1	a0001	c0001	t0001	g0041	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18946	hp2	a0001	c0001	t0001	g0005	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18951	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18952	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18954	hp2	a0001	c0001	t0002	g0006	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18956	hp1	a0001	c0001	t0001	g0032	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18956	hp2	a0001	c0001	t0002	g0006	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18960	hp2	a0001	c0001	t0001	g0034	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18962	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18963	hp1	a0001	c0001	t0002	g0006	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18963	hp2	a0001	c0001	t0001	g0004	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18969	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18969	hp2	a0001	c0001	t0001	g0043	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18970	hp2	a0001	c0001	t0004	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18975	hp1	a0001	c0001	t0001	g0061	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18975	hp2	a0001	c0001	t0001	g0076	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18980	hp1	a0001	c0001	t0001	g0015	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18980	hp2	a0001	c0001	t0002	g0006	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18982	hp1	a0001	c0001	t0002	g0006	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18982	hp2	a0001	c0001	t0001	g0004	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18983	hp2	a0001	c0001	t0001	g0004	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18990	hp1	a0001	c0001	t0002	g0006	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18990	hp2	a0001	c0001	t0001	g0006	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18994	hp2	a0001	c0001	t0001	g0002	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18998	hp2	a0001	c0001	t0001	g0002	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19004	hp1	a0001	c0001	t0002	g0006	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19004	hp2	a0001	c0001	t0001	g0004	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19005	hp1	a0001	c0001	t0001	g0058	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19005	hp2	a0001	c0001	t0001	g0005	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19009	hp2	a0001	c0001	t0001	g0015	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19011	hp1	a0001	c0001	t0001	g0071	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19030	hp1	a0001	c0001	t0001	g0021	AFR	LWK	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19030	hp2	a0001	c0001	t0001	g0051	AFR	LWK	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19043	hp1	a0001	c0001	t0001	g0042	AFR	LWK	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19043	hp2	a0001	c0001	t0001	g0001	AFR	LWK	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19055	hp2	a0001	c0001	t0001	g0032	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19056	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19064	hp1	a0001	c0001	t0004	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19064	hp2	a0001	c0001	t0001	g0002	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19065	hp1	a0001	c0001	t0001	g0053	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19065	hp2	a0001	c0001	t0004	g0065	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19067	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19068	hp1	a0001	c0001	t0007	g0024	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19070	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19074	hp2	a0001	c0001	t0001	g0050	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19081	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19081	hp2	a0001	c0001	t0001	g0015	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19088	hp2	a0001	c0001	t0001	g0074	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19089	hp1	a0001	c0001	t0001	g0005	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19089	hp2	a0001	c0001	t0001	g0073	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19240	hp1	a0001	c0001	t0002	g0067	AFR	YRI	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA19240	hp2	a0001	c0001	t0001	g0079	AFR	YRI	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA20129	hp1	a0001	c0002	t0003	g0007	AFR	ASW	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA20129	hp2	a0001	c0001	t0001	g0047	AFR	ASW	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA20805	hp1	a0001	c0001	t0001	g0019	EUR	TSI	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01123	hp1	a0001	c0001	t0001	g0026	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG01123	hp2	a0001	c0001	t0001	g0009	AMR	CLM	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02109	hp1	a0001	c0001	t0001	g0004	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02109	hp2	a0001	c0001	t0003	g0017	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02486	hp1	a0001	c0001	t0001	g0028	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG02559	hp2	a0001	c0001	t0001	g0003	AFR	ACB	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03471	hp1	a0001	c0001	t0001	g0003	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG06807	hp1	a0001	c0001	t0001	g0016	AFR	USA	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
HG06807	hp2	a0001	c0001	t0001	g0052	AFR	USA	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA18955	hp2	a0001	c0001	t0001	g0048	EAS	JPT	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA20300	hp1	a0001	c0001	t0001	g0009	AFR	USA	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA20300	hp2	a0001	c0001	t0001	g0002	AFR	USA	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
NA21309	hp2	a0001	c0001	t0001	g0040	AFR	LWK	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0025	REF	REF	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231
homoSapiens_grch38	hp1	a0001	c0001	t0003	g0017	REF	REF	HMGA1_chr6_34231873_34251231	HMGA1	chr6	34231873	34251231

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr6:34240837	C C	T T	1	a0001c0002 a0001c0002	7	HG01884.hp1 HG02896.hp1 HG02897.hp1 others(4): Show HG01884.hp1 HG02896.hp1 HG02897.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp1 NA20129.hp1	synonymous_variant	LOW	c.57C>T c.57C>T	p.Asp19Asp p.Asp19Asp	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/6	306/1920	57/324	19/107			chr6	34240837
chr6:34244857	G G	A A	1	a0001c0003 a0001c0003	1	HG02896.hp2 HG02896.hp2	synonymous_variant	LOW	c.297G>A c.297G>A	p.Ser99Ser p.Ser99Ser	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	546/1920	297/324	99/107			chr6	34244857

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr6:34236925	C C	T T	1	a0001c0001t0015 a0001c0001t0015	1	HG02683.hp2 HG02683.hp2	5_prime_UTR_variant	MODIFIER	c.-197C>T c.-197C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	1/6	3856	chr6	34236925
chr6:34244966	A A	G G	14	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0003t0001	311	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(308): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.82A>G c.82A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	82	chr6	34244966
chr6:34245005	G G	A A	1	a0001c0001t0011 a0001c0001t0011	1	HG01168.hp2 HG01168.hp2	3_prime_UTR_variant	MODIFIER	c.121G>A c.121G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	121	chr6	34245005
chr6:34245060	G G	A A	2	a0001c0001t0007 a0001c0001t0012 a0001c0001t0007 a0001c0001t0012	3	HG02071.hp2 HG03654.hp2 NA19068.hp1 HG02071.hp2 HG03654.hp2 NA19068.hp1	3_prime_UTR_variant	MODIFIER	c.176G>A c.176G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	176	chr6	34245060
chr6:34245187	C C	G G	1	a0001c0001t0012 a0001c0001t0012	1	HG02071.hp2 HG02071.hp2	3_prime_UTR_variant	MODIFIER	c.303C>G c.303C>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	303	chr6	34245187
chr6:34245313	C C	T T	1	a0001c0001t0014 a0001c0001t0014	1	HG03017.hp2 HG03017.hp2	3_prime_UTR_variant	MODIFIER	c.429C>T c.429C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	429	chr6	34245313
chr6:34245356	C C	T T	1	a0001c0001t0012 a0001c0001t0012	1	HG02071.hp2 HG02071.hp2	3_prime_UTR_variant	MODIFIER	c.472C>T c.472C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	472	chr6	34245356
chr6:34245473	C C	T T	1	a0001c0001t0010 a0001c0001t0010	2	HG02258.hp1 HG02976.hp2 HG02258.hp1 HG02976.hp2	3_prime_UTR_variant	MODIFIER	c.589C>T c.589C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	589	chr6	34245473
chr6:34245492	C C	T T	1	a0001c0001t0002 a0001c0001t0002	14	NA18941.hp1 NA18954.hp2 NA18956.hp2 others(11): Show NA18941.hp1 NA18954.hp2 NA18956.hp2 NA18962.hp1 NA18963.hp1 NA18969.hp1 NA18980.hp2 NA18982.hp1 NA18990.hp1 NA19004.hp1 NA19056.hp1 NA19070.hp2 NA19081.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.608C>T c.608C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	608	chr6	34245492
chr6:34245519	T T	C C	14	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0003t0001	311	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(308): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.635T>C c.635T>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	635	chr6	34245519
chr6:34245587	G G	A A	1	a0001c0001t0004 a0001c0001t0004	6	HG00558.hp2 HG02074.hp1 NA18944.hp1 others(3): Show HG00558.hp2 HG02074.hp1 NA18944.hp1 NA18970.hp2 NA19064.hp1 NA19065.hp2	3_prime_UTR_variant	MODIFIER	c.703G>A c.703G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	703	chr6	34245587
chr6:34245589	C C	T T	1	a0001c0001t0013 a0001c0001t0013	1	HG01928.hp2 HG01928.hp2	3_prime_UTR_variant	MODIFIER	c.705C>T c.705C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	705	chr6	34245589
chr6:34245633	A A	G G	1	a0001c0001t0009 a0001c0001t0009	2	HG01255.hp2 HG03130.hp2 HG01255.hp2 HG03130.hp2	3_prime_UTR_variant	MODIFIER	c.749A>G c.749A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	749	chr6	34245633
chr6:34245684	G G	C C	1	a0001c0001t0007 a0001c0001t0007	2	HG03654.hp2 NA19068.hp1 HG03654.hp2 NA19068.hp1	3_prime_UTR_variant	MODIFIER	c.800G>C c.800G>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	800	chr6	34245684
chr6:34245775	G G	A A	1	a0001c0001t0002 a0001c0001t0002	14	NA18941.hp1 NA18954.hp2 NA18956.hp2 others(11): Show NA18941.hp1 NA18954.hp2 NA18956.hp2 NA18962.hp1 NA18963.hp1 NA18969.hp1 NA18980.hp2 NA18982.hp1 NA18990.hp1 NA19004.hp1 NA19056.hp1 NA19070.hp2 NA19081.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.891G>A c.891G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	891	chr6	34245775
chr6:34245976	C C	G G	1	a0001c0001t0005 a0001c0001t0005	5	HG00099.hp2 HG00140.hp2 HG01081.hp2 others(2): Show HG00099.hp2 HG00140.hp2 HG01081.hp2 HG01515.hp1 HG01517.hp2	3_prime_UTR_variant	MODIFIER	c.1092C>G c.1092C>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	1092	chr6	34245976
chr6:34246091	A A	G G	16	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0002t0006 a0001c0003t0001	314	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(311): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.1207A>G c.1207A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	1207	chr6	34246091
chr6:34246096	G G	A A	1	a0001c0001t0008 a0001c0001t0008	2	HG00733.hp1 HG01192.hp1 HG00733.hp1 HG01192.hp1	3_prime_UTR_variant	MODIFIER	c.1212G>A c.1212G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	6/6	1212	chr6	34246096

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr6:34237092	A A	C C	1	a0001c0001t0001g0079 a0001c0001t0001g0079	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.-158-112A>C c.-158-112A>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	1/5		chr6	34237092
chr6:34237186	G G	GCT GCT	88	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(85): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0067 a0001c0001t0004g0001 a0001c0001t0004g0060 a0001c0001t0004g0065 a0001c0001t0005g0013 a0001c0001t0005g0035 a0001c0001t0006g0037 a0001c0001t0007g0024 a0001c0001t0008g0031 a0001c0001t0009g0023 a0001c0001t0010g0068 a0001c0001t0010g0069 a0001c0001t0011g0019 a0001c0001t0012g0001 a0001c0001t0013g0001 a0001c0001t0014g0001 a0001c0001t0015g0026 a0001c0002t0003g0007 a0001c0002t0006g0007 a0001c0003t0001g0012	319	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(316): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-158-12_-158-11dup others(2): Show c.-158-12_-158-11dupTC	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	1/5	INFO_REALIGN_3_PRIME	chr6	34237186
chr6:34237387	C C	T T	1	a0001c0001t0001g0078 a0001c0001t0001g0078	1	NA18942.hp2 NA18942.hp2	intron_variant	MODIFIER	c.-45+70C>T c.-45+70C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237387
chr6:34237396	G G	A A	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	NA18960.hp2 NA18960.hp2	intron_variant	MODIFIER	c.-45+79G>A c.-45+79G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237396
chr6:34237457	C C	G G	1	a0001c0001t0001g0077 a0001c0001t0001g0077	1	HG02630.hp2 HG02630.hp2	intron_variant	MODIFIER	c.-45+140C>G c.-45+140C>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237457
chr6:34237460	C C	A A	1	a0001c0001t0009g0023 a0001c0001t0009g0023	2	HG01255.hp2 HG03130.hp2 HG01255.hp2 HG03130.hp2	intron_variant	MODIFIER	c.-45+143C>A c.-45+143C>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237460
chr6:34237465	G G	GGGGAGGG others(11): Show GGGGAGGGCCGCGCGGCGC	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG01884.hp2 HG01884.hp2	intron_variant	MODIFIER	c.-45+152_-45+169dup others(18): Show c.-45+152_-45+169dupAGGGCCGCGCGGCGCGGG	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr6	34237465
chr6:34237479	G G	A A	2	a0001c0001t0005g0013 a0001c0001t0005g0035 a0001c0001t0005g0013 a0001c0001t0005g0035	5	HG00099.hp2 HG00140.hp2 HG01081.hp2 others(2): Show HG00099.hp2 HG00140.hp2 HG01081.hp2 HG01515.hp1 HG01517.hp2	intron_variant	MODIFIER	c.-45+162G>A c.-45+162G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237479
chr6:34237495	G G	A A	3	a0001c0001t0001g0025 a0001c0001t0006g0037 a0001c0001t0007g0024 a0001c0001t0001g0025 a0001c0001t0006g0037 a0001c0001t0007g0024	5	HG02145.hp1 HG02602.hp2 HG03654.hp2 others(2): Show HG02145.hp1 HG02602.hp2 HG03654.hp2 NA19068.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-45+178G>A c.-45+178G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237495
chr6:34237634	C C	CGGAGCCC others(3): Show CGGAGCCCGGA	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.-45+327_-45+336dup others(10): Show c.-45+327_-45+336dupAGGAGCCCGG	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr6	34237634
chr6:34237670	G G	A A	2	a0001c0001t0001g0010 a0001c0001t0001g0039 a0001c0001t0001g0010 a0001c0001t0001g0039	6	HG02280.hp1 HG02451.hp1 HG03225.hp2 others(3): Show HG02280.hp1 HG02451.hp1 HG03225.hp2 HG03516.hp2 HG03579.hp1 NA18522.hp1	intron_variant	MODIFIER	c.-45+353G>A c.-45+353G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237670
chr6:34237688	G G	GGAGCCC GGAGCCC	50	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(47): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0004g0001 a0001c0001t0004g0060 a0001c0001t0005g0013 a0001c0001t0005g0035 a0001c0001t0009g0023 a0001c0001t0011g0019 a0001c0001t0012g0001 a0001c0001t0013g0001 a0001c0001t0014g0001 a0001c0001t0015g0026	222	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(219): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02895.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03834.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19064.hp1 NA19065.hp1 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-45+385_-45+390dup others(6): Show c.-45+385_-45+390dupAGCCCG	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr6	34237688
chr6:34237755	G G	T T	13	a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 others(10): Show a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076	39	HG00735.hp1 HG01109.hp1 HG01109.hp2 others(36): Show HG00735.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01884.hp2 HG01928.hp1 HG01934.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02080.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02717.hp1 HG02818.hp1 HG03704.hp2 HG03834.hp2 HG06807.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp1 NA18956.hp1 NA18975.hp2 NA18994.hp2 NA18998.hp2 NA19011.hp1 NA19055.hp2 NA19064.hp2 NA19067.hp1 NA19088.hp2 NA19089.hp2 NA20300.hp2	intron_variant	MODIFIER	c.-45+438G>T c.-45+438G>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237755
chr6:34237767	G G	C C	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.-45+450G>C c.-45+450G>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237767
chr6:34237844	C C	G G	1	a0001c0001t0001g0061 a0001c0001t0001g0061	1	NA18975.hp1 NA18975.hp1	intron_variant	MODIFIER	c.-45+527C>G c.-45+527C>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237844
chr6:34237865	C C	A A	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	NA18946.hp1 NA18946.hp1	intron_variant	MODIFIER	c.-45+548C>A c.-45+548C>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237865
chr6:34237936	G G	A A	2	a0001c0002t0003g0007 a0001c0002t0006g0007 a0001c0002t0003g0007 a0001c0002t0006g0007	7	HG01884.hp1 HG02896.hp1 HG02897.hp1 others(4): Show HG01884.hp1 HG02896.hp1 HG02897.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp1 NA20129.hp1	intron_variant	MODIFIER	c.-45+619G>A c.-45+619G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237936
chr6:34237984	T T	G G	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	NA19043.hp1 NA19043.hp1	intron_variant	MODIFIER	c.-45+667T>G c.-45+667T>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34237984
chr6:34238045	T T	C C	10	a0001c0001t0001g0002 a0001c0001t0001g0022 a0001c0001t0001g0032 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076	32	HG00735.hp1 HG01109.hp2 HG01167.hp2 others(29): Show HG00735.hp1 HG01109.hp2 HG01167.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01928.hp1 HG01934.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02080.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp1 NA18956.hp1 NA18975.hp2 NA18994.hp2 NA18998.hp2 NA19011.hp1 NA19055.hp2 NA19064.hp2 NA19067.hp1 NA19088.hp2 NA19089.hp2 NA20300.hp2	intron_variant	MODIFIER	c.-45+728T>C c.-45+728T>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238045
chr6:34238185	C C	T T	2	a0001c0001t0001g0011 a0001c0001t0001g0042 a0001c0001t0001g0011 a0001c0001t0001g0042	6	HG02630.hp1 HG02717.hp2 HG03195.hp2 others(3): Show HG02630.hp1 HG02717.hp2 HG03195.hp2 HG03225.hp1 HG03540.hp2 NA19043.hp1	intron_variant	MODIFIER	c.-45+868C>T c.-45+868C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238185
chr6:34238268	C C	G G	12	a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 others(9): Show a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076	38	HG00735.hp1 HG01109.hp1 HG01109.hp2 others(35): Show HG00735.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01884.hp2 HG01928.hp1 HG01934.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02717.hp1 HG02818.hp1 HG03704.hp2 HG03834.hp2 HG06807.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp1 NA18956.hp1 NA18975.hp2 NA18994.hp2 NA18998.hp2 NA19011.hp1 NA19055.hp2 NA19064.hp2 NA19067.hp1 NA19088.hp2 NA19089.hp2 NA20300.hp2	intron_variant	MODIFIER	c.-45+951C>G c.-45+951C>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238268
chr6:34238327	C C	A A	1	a0001c0001t0001g0033 a0001c0001t0001g0033	2	HG03704.hp2 HG03834.hp2 HG03704.hp2 HG03834.hp2	intron_variant	MODIFIER	c.-45+1010C>A c.-45+1010C>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238327
chr6:34238341	C C	G G	4	a0001c0001t0001g0010 a0001c0001t0001g0039 a0001c0001t0010g0068 others(1): Show a0001c0001t0001g0010 a0001c0001t0001g0039 a0001c0001t0010g0068 a0001c0001t0010g0069	8	HG02258.hp1 HG02280.hp1 HG02451.hp1 others(5): Show HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02976.hp2 HG03225.hp2 HG03516.hp2 HG03579.hp1 NA18522.hp1	intron_variant	MODIFIER	c.-45+1024C>G c.-45+1024C>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238341
chr6:34238353	G G	A A	1	a0001c0001t0009g0023 a0001c0001t0009g0023	2	HG01255.hp2 HG03130.hp2 HG01255.hp2 HG03130.hp2	intron_variant	MODIFIER	c.-45+1036G>A c.-45+1036G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238353
chr6:34238363	T T	G G	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18969.hp2 NA18969.hp2	intron_variant	MODIFIER	c.-45+1046T>G c.-45+1046T>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238363
chr6:34238391	A A	G G	1	a0001c0001t0004g0060 a0001c0001t0004g0060	1	HG02074.hp1 HG02074.hp1	intron_variant	MODIFIER	c.-45+1074A>G c.-45+1074A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238391
chr6:34238401	G G	A A	1	a0001c0001t0001g0014 a0001c0001t0001g0014	4	HG00639.hp2 HG01069.hp2 HG01071.hp1 others(1): Show HG00639.hp2 HG01069.hp2 HG01071.hp1 HG01361.hp2	intron_variant	MODIFIER	c.-45+1084G>A c.-45+1084G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238401
chr6:34238428	C C	T T	1	a0001c0001t0001g0020 a0001c0001t0001g0020	3	HG00280.hp1 HG01069.hp1 HG03017.hp1 HG00280.hp1 HG01069.hp1 HG03017.hp1	intron_variant	MODIFIER	c.-45+1111C>T c.-45+1111C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238428
chr6:34238442	A A	G G	1	a0001c0001t0009g0023 a0001c0001t0009g0023	2	HG01255.hp2 HG03130.hp2 HG01255.hp2 HG03130.hp2	intron_variant	MODIFIER	c.-45+1125A>G c.-45+1125A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238442
chr6:34238518	A A	T T	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	HG04115.hp1 HG04115.hp1	intron_variant	MODIFIER	c.-45+1201A>T c.-45+1201A>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238518
chr6:34238777	T T	C C	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	NA18906.hp1 NA18906.hp1	intron_variant	MODIFIER	c.-45+1460T>C c.-45+1460T>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238777
chr6:34238800	C C	A A	2	a0001c0001t0005g0013 a0001c0001t0005g0035 a0001c0001t0005g0013 a0001c0001t0005g0035	5	HG00099.hp2 HG00140.hp2 HG01081.hp2 others(2): Show HG00099.hp2 HG00140.hp2 HG01081.hp2 HG01515.hp1 HG01517.hp2	intron_variant	MODIFIER	c.-45+1483C>A c.-45+1483C>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238800
chr6:34238811	G G	C C	2	a0001c0001t0001g0026 a0001c0001t0015g0026 a0001c0001t0001g0026 a0001c0001t0015g0026	2	HG01123.hp1 HG02683.hp2 HG01123.hp1 HG02683.hp2	intron_variant	MODIFIER	c.-45+1494G>C c.-45+1494G>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238811
chr6:34238812	G G	A A	1	a0001c0001t0007g0024 a0001c0001t0007g0024	2	HG03654.hp2 NA19068.hp1 HG03654.hp2 NA19068.hp1	intron_variant	MODIFIER	c.-45+1495G>A c.-45+1495G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238812
chr6:34238852	C C	T T	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	NA18975.hp2 NA18975.hp2	intron_variant	MODIFIER	c.-45+1535C>T c.-45+1535C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238852
chr6:34238868	C C	G G	4	a0001c0001t0001g0010 a0001c0001t0001g0039 a0001c0001t0010g0068 others(1): Show a0001c0001t0001g0010 a0001c0001t0001g0039 a0001c0001t0010g0068 a0001c0001t0010g0069	8	HG02258.hp1 HG02280.hp1 HG02451.hp1 others(5): Show HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02976.hp2 HG03225.hp2 HG03516.hp2 HG03579.hp1 NA18522.hp1	intron_variant	MODIFIER	c.-45+1551C>G c.-45+1551C>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34238868
chr6:34239092	A A	G G	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	NA19005.hp1 NA19005.hp1	intron_variant	MODIFIER	c.-44-1645A>G c.-44-1645A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239092
chr6:34239268	C C	CT CT	2	a0001c0001t0001g0006 a0001c0001t0002g0006 a0001c0001t0001g0006 a0001c0001t0002g0006	8	NA18954.hp2 NA18956.hp2 NA18963.hp1 others(5): Show NA18954.hp2 NA18956.hp2 NA18963.hp1 NA18980.hp2 NA18982.hp1 NA18990.hp1 NA18990.hp2 NA19004.hp1	intron_variant	MODIFIER	c.-44-1457dupT c.-44-1457dupT	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr6	34239268
chr6:34239268	CT CT	C C	11	a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0021 others(8): Show a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0021 a0001c0001t0001g0028 a0001c0001t0001g0032 a0001c0001t0001g0041 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0071 a0001c0001t0005g0035 a0001c0003t0001g0012	26	HG01515.hp1 HG01891.hp2 HG02109.hp1 others(23): Show HG01515.hp1 HG01891.hp2 HG02109.hp1 HG02280.hp2 HG02486.hp1 HG02622.hp2 HG02647.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02896.hp2 HG02965.hp1 HG02976.hp1 HG03139.hp2 HG03453.hp1 HG03516.hp1 NA18522.hp2 NA18946.hp1 NA18956.hp1 NA18963.hp2 NA18982.hp2 NA18983.hp2 NA19004.hp2 NA19011.hp1 NA19030.hp1 NA19055.hp2	intron_variant	MODIFIER	c.-44-1457delT c.-44-1457delT	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr6	34239268
chr6:34239329	G G	A A	1	a0001c0001t0001g0029 a0001c0001t0001g0029	2	HG02055.hp2 HG02818.hp2 HG02055.hp2 HG02818.hp2	intron_variant	MODIFIER	c.-44-1408G>A c.-44-1408G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239329
chr6:34239332	C C	G G	2	a0001c0001t0001g0038 a0001c0001t0001g0062 a0001c0001t0001g0038 a0001c0001t0001g0062	2	HG01255.hp1 NA18906.hp1 HG01255.hp1 NA18906.hp1	intron_variant	MODIFIER	c.-44-1405C>G c.-44-1405C>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239332
chr6:34239378	G G	A A	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.-44-1359G>A c.-44-1359G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239378
chr6:34239657	G G	A A	3	a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0063 a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0063	12	HG02109.hp1 HG02280.hp2 HG02486.hp1 others(9): Show HG02109.hp1 HG02280.hp2 HG02486.hp1 HG02809.hp2 HG02965.hp1 HG02976.hp1 HG03453.hp1 NA18522.hp2 NA18963.hp2 NA18982.hp2 NA18983.hp2 NA19004.hp2	intron_variant	MODIFIER	c.-44-1080G>A c.-44-1080G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239657
chr6:34239697	T T	TAA TAA	53	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(50): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0004g0001 a0001c0001t0004g0060 a0001c0001t0004g0065 a0001c0001t0005g0013 a0001c0001t0005g0035 a0001c0001t0009g0023 a0001c0001t0011g0019 a0001c0001t0012g0001 a0001c0001t0013g0001 a0001c0001t0014g0001 a0001c0001t0015g0026	227	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(224): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03834.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-44-1040_-44-1039i others(4): Show c.-44-1040_-44-1039insAA	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239697
chr6:34239700	A A	T T	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	HG02135.hp2 HG02135.hp2	intron_variant	MODIFIER	c.-44-1037A>T c.-44-1037A>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239700
chr6:34239741	A A	G G	1	a0001c0001t0006g0037 a0001c0001t0006g0037	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.-44-996A>G c.-44-996A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239741
chr6:34239812	A A	G G	1	a0001c0001t0001g0056 a0001c0001t0001g0056	1	HG00408.hp2 HG00408.hp2	intron_variant	MODIFIER	c.-44-925A>G c.-44-925A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239812
chr6:34239955	ACCCATCT others(8): Show ACCCATCTGACAAAGT	A A	1	a0001c0001t0001g0027 a0001c0001t0001g0027	2	HG02027.hp2 HG02040.hp2 HG02027.hp2 HG02040.hp2	intron_variant	MODIFIER	c.-44-771_-44-757del others(15): Show c.-44-771_-44-757delAAAGTCCCATCTGAC	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr6	34239955
chr6:34239971	C C	T T	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	HG02040.hp1 HG02040.hp1	intron_variant	MODIFIER	c.-44-766C>T c.-44-766C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34239971
chr6:34240100	A A	G G	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	HG00642.hp1 HG00642.hp1	intron_variant	MODIFIER	c.-44-637A>G c.-44-637A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240100
chr6:34240122	A A	T T	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG02273.hp2 HG02273.hp2	intron_variant	MODIFIER	c.-44-615A>T c.-44-615A>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240122
chr6:34240161	C C	A A	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	HG00423.hp1 HG00423.hp1	intron_variant	MODIFIER	c.-44-576C>A c.-44-576C>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240161
chr6:34240188	T T	C C	1	a0001c0001t0001g0009 a0001c0001t0001g0009	6	HG01123.hp2 HG02257.hp2 HG02451.hp2 others(3): Show HG01123.hp2 HG02257.hp2 HG02451.hp2 HG02622.hp1 HG02895.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-44-549T>C c.-44-549T>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240188
chr6:34240207	C C	T T	1	a0001c0001t0001g0053 a0001c0001t0001g0053	1	NA19065.hp1 NA19065.hp1	intron_variant	MODIFIER	c.-44-530C>T c.-44-530C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240207
chr6:34240213	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	HG02602.hp2 homoSapiens_chm13v2.hp1 HG02602.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-44-524C>T c.-44-524C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240213
chr6:34240299	A A	G G	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.-44-438A>G c.-44-438A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240299
chr6:34240309	G G	A A	1	a0001c0001t0007g0024 a0001c0001t0007g0024	2	HG03654.hp2 NA19068.hp1 HG03654.hp2 NA19068.hp1	intron_variant	MODIFIER	c.-44-428G>A c.-44-428G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240309
chr6:34240315	T T	G G	7	a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0021 others(4): Show a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0021 a0001c0001t0001g0028 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0003t0001g0012	21	HG01891.hp2 HG02109.hp1 HG02280.hp2 others(18): Show HG01891.hp2 HG02109.hp1 HG02280.hp2 HG02486.hp1 HG02622.hp2 HG02647.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02896.hp2 HG02965.hp1 HG02976.hp1 HG03139.hp2 HG03453.hp1 HG03516.hp1 NA18522.hp2 NA18963.hp2 NA18982.hp2 NA18983.hp2 NA19004.hp2 NA19030.hp1	intron_variant	MODIFIER	c.-44-422T>G c.-44-422T>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240315
chr6:34240413	T T	C C	7	a0001c0001t0001g0010 a0001c0001t0001g0025 a0001c0001t0001g0039 others(4): Show a0001c0001t0001g0010 a0001c0001t0001g0025 a0001c0001t0001g0039 a0001c0001t0006g0037 a0001c0001t0007g0024 a0001c0001t0010g0068 a0001c0001t0010g0069	13	HG02145.hp1 HG02258.hp1 HG02280.hp1 others(10): Show HG02145.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02602.hp2 HG02976.hp2 HG03225.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp2 NA18522.hp1 NA19068.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-44-324T>C c.-44-324T>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240413
chr6:34240459	A A	AC AC	6	a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0001t0001g0028 others(3): Show a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0001t0001g0028 a0001c0001t0001g0061 a0001c0001t0001g0070 a0001c0001t0001g0071	16	HG00423.hp2 HG00597.hp1 HG00597.hp2 others(13): Show HG00423.hp2 HG00597.hp1 HG00597.hp2 HG01433.hp2 HG01496.hp1 HG02080.hp1 HG02293.hp2 HG02486.hp1 HG02809.hp2 HG04184.hp2 NA18944.hp2 NA18946.hp2 NA18975.hp1 NA19005.hp2 NA19011.hp1 NA19089.hp1	intron_variant	MODIFIER	c.-44-270dupC c.-44-270dupC	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr6	34240459
chr6:34240463	C C	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	6	HG00735.hp2 HG01099.hp1 HG02027.hp1 others(3): Show HG00735.hp2 HG01099.hp1 HG02027.hp1 HG03239.hp2 HG03688.hp1 HG04199.hp2	intron_variant	MODIFIER	c.-44-274C>T c.-44-274C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240463
chr6:34240472	C C	T T	2	a0001c0001t0001g0019 a0001c0001t0011g0019 a0001c0001t0001g0019 a0001c0001t0011g0019	3	HG01168.hp2 HG01175.hp2 NA20805.hp1 HG01168.hp2 HG01175.hp2 NA20805.hp1	intron_variant	MODIFIER	c.-44-265C>T c.-44-265C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240472
chr6:34240599	C C	T T	2	a0001c0001t0001g0066 a0001c0001t0002g0067 a0001c0001t0001g0066 a0001c0001t0002g0067	2	HG03041.hp2 NA19240.hp1 HG03041.hp2 NA19240.hp1	intron_variant	MODIFIER	c.-44-138C>T c.-44-138C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	2/5		chr6	34240599
chr6:34240941	T T	G G	1	a0001c0001t0009g0023 a0001c0001t0009g0023	2	HG01255.hp2 HG03130.hp2 HG01255.hp2 HG03130.hp2	intron_variant	MODIFIER	c.135+26T>G c.135+26T>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34240941
chr6:34240996	C C	A A	3	a0001c0001t0001g0025 a0001c0001t0006g0037 a0001c0001t0007g0024 a0001c0001t0001g0025 a0001c0001t0006g0037 a0001c0001t0007g0024	5	HG02145.hp1 HG02602.hp2 HG03654.hp2 others(2): Show HG02145.hp1 HG02602.hp2 HG03654.hp2 NA19068.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.135+81C>A c.135+81C>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34240996
chr6:34241025	C C	T T	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	NA18946.hp1 NA18946.hp1	intron_variant	MODIFIER	c.135+110C>T c.135+110C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241025
chr6:34241052	CACCTGTG others(9): Show CACCTGTGTGTACTCCT	C C	1	a0001c0001t0007g0024 a0001c0001t0007g0024	2	HG03654.hp2 NA19068.hp1 HG03654.hp2 NA19068.hp1	intron_variant	MODIFIER	c.135+138_135+153del others(16): Show c.135+138_135+153delACCTGTGTGTACTCCT	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241052
chr6:34241066	C C	T T	3	a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0077 a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0077	13	HG00280.hp1 HG01069.hp1 HG02145.hp2 others(10): Show HG00280.hp1 HG01069.hp1 HG02145.hp2 HG02559.hp2 HG02630.hp2 HG02698.hp1 HG02970.hp1 HG03017.hp1 HG03098.hp2 HG03130.hp1 HG03471.hp1 HG03486.hp1 HG03579.hp2	intron_variant	MODIFIER	c.135+151C>T c.135+151C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241066
chr6:34241072	C C	T T	2	a0001c0001t0001g0038 a0001c0001t0001g0062 a0001c0001t0001g0038 a0001c0001t0001g0062	2	HG01255.hp1 NA18906.hp1 HG01255.hp1 NA18906.hp1	intron_variant	MODIFIER	c.135+157C>T c.135+157C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241072
chr6:34241126	C C	T T	1	a0001c0001t0004g0065 a0001c0001t0004g0065	1	NA19065.hp2 NA19065.hp2	intron_variant	MODIFIER	c.135+211C>T c.135+211C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241126
chr6:34241147	T T	C C	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	HG02083.hp1 HG02083.hp1	intron_variant	MODIFIER	c.135+232T>C c.135+232T>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241147
chr6:34241331	G G	A A	1	a0001c0001t0007g0024 a0001c0001t0007g0024	2	HG03654.hp2 NA19068.hp1 HG03654.hp2 NA19068.hp1	intron_variant	MODIFIER	c.135+416G>A c.135+416G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241331
chr6:34241490	T T	C C	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	HG02965.hp1 HG02965.hp1	intron_variant	MODIFIER	c.135+575T>C c.135+575T>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241490
chr6:34241504	T T	A A	13	a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 others(10): Show a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076	39	HG00735.hp1 HG01109.hp1 HG01109.hp2 others(36): Show HG00735.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01884.hp2 HG01928.hp1 HG01934.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02080.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02717.hp1 HG02818.hp1 HG03704.hp2 HG03834.hp2 HG06807.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp1 NA18956.hp1 NA18975.hp2 NA18994.hp2 NA18998.hp2 NA19011.hp1 NA19055.hp2 NA19064.hp2 NA19067.hp1 NA19088.hp2 NA19089.hp2 NA20300.hp2	intron_variant	MODIFIER	c.135+589T>A c.135+589T>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241504
chr6:34241579	A A	G G	1	a0001c0001t0006g0037 a0001c0001t0006g0037	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.135+664A>G c.135+664A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241579
chr6:34241608	G G	T T	1	a0001c0001t0006g0037 a0001c0001t0006g0037	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.135+693G>T c.135+693G>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241608
chr6:34241657	G G	A A	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	HG01257.hp2 HG01257.hp2	intron_variant	MODIFIER	c.135+742G>A c.135+742G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241657
chr6:34241739	C C	T T	4	a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0051 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0077	14	HG00280.hp1 HG01069.hp1 HG02145.hp2 others(11): Show HG00280.hp1 HG01069.hp1 HG02145.hp2 HG02559.hp2 HG02630.hp2 HG02698.hp1 HG02970.hp1 HG03017.hp1 HG03098.hp2 HG03130.hp1 HG03471.hp1 HG03486.hp1 HG03579.hp2 NA19030.hp2	intron_variant	MODIFIER	c.135+824C>T c.135+824C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241739
chr6:34241939	C C	T T	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	NA19088.hp2 NA19088.hp2	intron_variant	MODIFIER	c.136-773C>T c.136-773C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34241939
chr6:34242015	C C	T T	3	a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0063 a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0063	12	HG02109.hp1 HG02280.hp2 HG02486.hp1 others(9): Show HG02109.hp1 HG02280.hp2 HG02486.hp1 HG02809.hp2 HG02965.hp1 HG02976.hp1 HG03453.hp1 NA18522.hp2 NA18963.hp2 NA18982.hp2 NA18983.hp2 NA19004.hp2	intron_variant	MODIFIER	c.136-697C>T c.136-697C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242015
chr6:34242054	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	HG02602.hp2 homoSapiens_chm13v2.hp1 HG02602.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.136-658C>T c.136-658C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242054
chr6:34242065	G G	A A	1	a0001c0001t0007g0024 a0001c0001t0007g0024	2	HG03654.hp2 NA19068.hp1 HG03654.hp2 NA19068.hp1	intron_variant	MODIFIER	c.136-647G>A c.136-647G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242065
chr6:34242067	G G	T T	3	a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0063 a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0063	12	HG02109.hp1 HG02280.hp2 HG02486.hp1 others(9): Show HG02109.hp1 HG02280.hp2 HG02486.hp1 HG02809.hp2 HG02965.hp1 HG02976.hp1 HG03453.hp1 NA18522.hp2 NA18963.hp2 NA18982.hp2 NA18983.hp2 NA19004.hp2	intron_variant	MODIFIER	c.136-645G>T c.136-645G>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242067
chr6:34242075	C C	T T	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	NA19074.hp2 NA19074.hp2	intron_variant	MODIFIER	c.136-637C>T c.136-637C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242075
chr6:34242120	G G	A A	1	a0001c0001t0006g0037 a0001c0001t0006g0037	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.136-592G>A c.136-592G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242120
chr6:34242263	G G	A A	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.136-449G>A c.136-449G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242263
chr6:34242536	C C	T T	1	a0001c0001t0006g0037 a0001c0001t0006g0037	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.136-176C>T c.136-176C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242536
chr6:34242610	G G	T T	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18969.hp2 NA18969.hp2	intron_variant	MODIFIER	c.136-102G>T c.136-102G>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5		chr6	34242610
chr6:34242693	A A	AC AC	12	a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 others(9): Show a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076	38	HG00735.hp1 HG01109.hp1 HG01109.hp2 others(35): Show HG00735.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01884.hp2 HG01928.hp1 HG01934.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02080.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02717.hp1 HG02818.hp1 HG03704.hp2 HG03834.hp2 HG06807.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp1 NA18956.hp1 NA18975.hp2 NA18994.hp2 NA18998.hp2 NA19011.hp1 NA19055.hp2 NA19064.hp2 NA19067.hp1 NA19088.hp2 NA20300.hp2	intron_variant	MODIFIER	c.136-14dupC c.136-14dupC	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	3/5	INFO_REALIGN_3_PRIME	chr6	34242693
chr6:34243041	C C	T T	1	a0001c0001t0001g0072 a0001c0001t0001g0072	1	HG01109.hp2 HG01109.hp2	intron_variant	MODIFIER	c.219+246C>T c.219+246C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	4/5		chr6	34243041
chr6:34243093	C C	T T	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG01358.hp1 HG01358.hp1	intron_variant	MODIFIER	c.219+298C>T c.219+298C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	4/5		chr6	34243093
chr6:34243142	G G	A A	1	a0001c0001t0007g0024 a0001c0001t0007g0024	2	HG03654.hp2 NA19068.hp1 HG03654.hp2 NA19068.hp1	intron_variant	MODIFIER	c.220-326G>A c.220-326G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	4/5		chr6	34243142
chr6:34243333	C C	CTTGGGTG others(19): Show CTTGGGTGGGCCTGTTGGGTGAGAGTG	2	a0001c0001t0001g0011 a0001c0001t0001g0042 a0001c0001t0001g0011 a0001c0001t0001g0042	6	HG02630.hp1 HG02717.hp2 HG03195.hp2 others(3): Show HG02630.hp1 HG02717.hp2 HG03195.hp2 HG03225.hp1 HG03540.hp2 NA19043.hp1	intron_variant	MODIFIER	c.220-128_220-103dup others(26): Show c.220-128_220-103dupGGGCCTGTTGGGTGAGAGTGTTGGGT	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	4/5	INFO_REALIGN_3_PRIME	chr6	34243333
chr6:34243461	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	HG02602.hp2 homoSapiens_chm13v2.hp1 HG02602.hp2 homoSapiens_chm13v2.hp1	splice_region_variant&intron_variant	LOW	c.220-7C>T c.220-7C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	4/5		chr6	34243461
chr6:34243564	GT GT	G G	64	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(61): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0067 a0001c0001t0004g0001 a0001c0001t0004g0060 a0001c0001t0004g0065 a0001c0001t0005g0013 a0001c0001t0005g0035 a0001c0001t0006g0037 a0001c0001t0007g0024 a0001c0001t0008g0031 a0001c0001t0009g0023 a0001c0001t0011g0019 a0001c0001t0012g0001 a0001c0001t0013g0001 a0001c0001t0014g0001 a0001c0001t0015g0026 a0001c0003t0001g0012	244	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(241): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03834.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.270+48delT c.270+48delT	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5	INFO_REALIGN_3_PRIME	chr6	34243564
chr6:34243659	G G	A A	1	a0001c0001t0010g0068 a0001c0001t0010g0068	1	HG02258.hp1 HG02258.hp1	intron_variant	MODIFIER	c.270+141G>A c.270+141G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34243659
chr6:34243987	C C	T T	12	a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 others(9): Show a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076	38	HG00735.hp1 HG01109.hp1 HG01109.hp2 others(35): Show HG00735.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01884.hp2 HG01928.hp1 HG01934.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02080.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02717.hp1 HG02818.hp1 HG03704.hp2 HG03834.hp2 HG06807.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp1 NA18956.hp1 NA18975.hp2 NA18994.hp2 NA18998.hp2 NA19011.hp1 NA19055.hp2 NA19064.hp2 NA19067.hp1 NA19088.hp2 NA20300.hp2	intron_variant	MODIFIER	c.270+469C>T c.270+469C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34243987
chr6:34244159	G G	A A	1	a0001c0001t0008g0031 a0001c0001t0008g0031	2	HG00733.hp1 HG01192.hp1 HG00733.hp1 HG01192.hp1	intron_variant	MODIFIER	c.270+641G>A c.270+641G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34244159
chr6:34244269	C C	A A	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.271-562C>A c.271-562C>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34244269
chr6:34244416	A A	G G	1	a0001c0001t0007g0024 a0001c0001t0007g0024	2	HG03654.hp2 NA19068.hp1 HG03654.hp2 NA19068.hp1	intron_variant	MODIFIER	c.271-415A>G c.271-415A>G	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34244416
chr6:34244561	G G	C C	1	a0001c0001t0001g0018 a0001c0001t0001g0018	3	HG01175.hp1 HG01891.hp1 HG02723.hp1 HG01175.hp1 HG01891.hp1 HG02723.hp1	intron_variant	MODIFIER	c.271-270G>C c.271-270G>C	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34244561
chr6:34244646	C C	T T	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19240.hp1 NA19240.hp1	intron_variant	MODIFIER	c.271-185C>T c.271-185C>T	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34244646
chr6:34244682	G G	A A	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	NA18955.hp2 NA18955.hp2	intron_variant	MODIFIER	c.271-149G>A c.271-149G>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34244682
chr6:34244760	T T	TG TG	3	a0001c0001t0001g0025 a0001c0001t0006g0037 a0001c0001t0007g0024 a0001c0001t0001g0025 a0001c0001t0006g0037 a0001c0001t0007g0024	5	HG02145.hp1 HG02602.hp2 HG03654.hp2 others(2): Show HG02145.hp1 HG02602.hp2 HG03654.hp2 NA19068.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.271-67dupG c.271-67dupG	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5	INFO_REALIGN_3_PRIME	chr6	34244760
chr6:34244779	T T	A A	1	a0001c0001t0001g0015 a0001c0001t0001g0015	4	HG02523.hp2 NA18980.hp1 NA19009.hp2 others(1): Show HG02523.hp2 NA18980.hp1 NA19009.hp2 NA19081.hp2	intron_variant	MODIFIER	c.271-52T>A c.271-52T>A	HMGA1	ENSG00000137309.21	transcript	ENST00000311487.9	protein_coding	5/5		chr6	34244779

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🧬 JoGo Online Haplotype Explorer HMGA1_chr6_34231873_34251231

JoGo Local Haplotype Explorer (on iGV) HMGA1_chr6_34231873_34251231

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 3)

TTranscript Level Haplotype Info (Total: 15)

GGenebody Level Haplotype Info (Total: 79)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 3)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 18)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 89)

Haplotype Details by Sample (Haploid Level) (Total: 322)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

CCoding Level Variants (Synonymous Mutations) (Total: 2)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 18)

GGenebody Level Haplotype Variants (Intron) (Total: 105)

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Annotation (Repeats)

Annotation (SNP Array)