JoGo: Joint Open Genome and Omics Platform

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geneid	147912
ensemblid	ENSG00000177045.11
hgncid	10891
symbol	SIX5
name	SIX homeobox 5
refseq_nuc	NM_175875.5
refseq_prot	NP_787071.3
ensembl_nuc	ENST00000317578.7
ensembl_prot	ENSP00000316842.4
mane_status	MANE Select
chr	chr19
start	45764785
end	45769252
strand	-
ver	v1.2
region	chr19:45764785-45769252
region5000	chr19:45759785-45774252
regionname0	SIX5_chr19_45764785_45769252
regionname5000	SIX5_chr19_45759785_45774252

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	739	228	27	54	109	9	29	91	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0002	0/1	739	101	19	19	46	5	11	25	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0003	1/0	739	36	0	6	23	3	3	20	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004	0/0	739	34	32	0	1	0	1	1	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0005	0/0	739	9	6	3	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0006	0/0	739	2	2	0	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0007	0/0	739	2	0	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0008	0/0	739	1	0	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0009	0/0	583	1	0	0	1	0	0	1	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	2220	221	24	52	107	9	29	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0002	0/1	2220	99	17	19	46	5	11	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0003	1/0	2220	35	0	5	23	3	3	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0004	0/0	2220	30	28	0	1	0	1	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0005	0/0	2220	9	6	3	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0006	0/0	2220	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0007	0/0	2220	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0008	0/0	2220	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0009	0/0	2220	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0010	0/0	2220	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0011	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0012	0/0	2220	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0013	0/0	2182	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0014	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0015	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0016	0/0	2220	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0017	0/0	2220	1	0	0	0	1	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0018	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0019	0/0	2220	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
c0020	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	1125	374	56	81	175	16	44	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0002	0/0	1126	7	7	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0003	0/0	1125	7	7	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0004	0/0	1125	3	0	1	0	2	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0005	0/0	1125	3	3	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0006	0/0	1125	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0007	0/0	1125	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0008	0/0	1126	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0009	0/0	1125	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0010	0/0	1125	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0011	0/0	1125	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0012	0/0	1125	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0013	0/0	1125	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0014	0/0	1125	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0015	0/0	1125	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0016	0/0	1125	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0017	0/0	1126	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0018	0/0	1125	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0019	0/0	1126	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0020	0/0	1126	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0021	0/0	1126	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
t0022	0/0	1126	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	209	23	48	103	7	28	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0002	0/1	93	14	18	46	3	11	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0003	1/0	32	0	5	20	3	3	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0004	0/0	9	6	3	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0005	0/0	7	7	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0006	0/0	7	7	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0007	0/0	4	0	2	0	1	1	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0008	0/0	4	3	0	0	0	1	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0009	0/0	3	0	1	0	2	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0010	0/0	3	3	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0011	0/0	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0012	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0013	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0014	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0015	0/0	2	1	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0016	0/0	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0017	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0018	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0019	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0020	0/0	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0021	0/0	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0022	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0023	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0024	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0025	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0026	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0027	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0028	0/0	1	0	0	0	1	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0029	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0030	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0031	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0032	0/0	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0033	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0034	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0035	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0036	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0037	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0038	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0039	0/0	1	0	0	0	1	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0040	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0041	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0042	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0043	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0044	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
g0045	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	2220	221	24	52	107	9	29	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0006	0/0	2220	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0011	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0014	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0016	0/0	2220	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0018	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0019	0/0	2220	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0002c0002	0/1	2220	99	17	19	46	5	11	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0002c0009	0/0	2220	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0003c0003	1/0	2220	35	0	5	23	3	3	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0003c0012	0/0	2220	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004	0/0	2220	30	28	0	1	0	1	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0007	0/0	2220	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0015	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0020	0/0	2220	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0005c0005	0/0	2220	9	6	3	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0006c0008	0/0	2220	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0007c0010	0/0	2220	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0008c0017	0/0	2220	1	0	0	0	1	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0009c0013	0/0	2182	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	3344	216	24	50	104	9	29	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0001t0009	0/0	3344	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0001t0010	0/0	3344	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0001t0011	0/0	3344	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0001t0015	0/0	3344	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0001t0016	0/0	3344	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0006t0001	0/0	3344	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0011t0001	0/0	3344	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0014t0001	0/0	3344	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0016t0001	0/0	3344	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0018t0001	0/0	3344	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0001c0019t0001	0/0	3344	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0002c0002t0001	0/1	3344	96	17	18	46	3	11	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0002c0002t0004	0/0	3344	3	0	1	0	2	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0002c0009t0007	0/0	3344	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0003c0003t0001	1/0	3344	33	0	5	21	3	3	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0003c0003t0014	0/0	3344	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0003c0003t0017	0/0	3345	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0003c0012t0001	0/0	3344	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0001	0/0	3344	6	4	0	1	0	1	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0002	0/0	3345	7	7	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0003	0/0	3344	7	7	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0005	0/0	3344	3	3	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0008	0/0	3345	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0012	0/0	3344	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0013	0/0	3344	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0019	0/0	3345	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0020	0/0	3345	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0004t0022	0/0	3345	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0007t0006	0/0	3344	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0015t0021	0/0	3345	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0004c0020t0018	0/0	3344	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0005c0005t0001	0/0	3344	9	6	3	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0006c0008t0001	0/0	3344	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0007c0010t0001	0/0	3344	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0008c0017t0001	0/0	3344	1	0	0	0	1	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252
a0009c0013t0001	0/0	3306	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	copy fasta	chr19	45759785	45774252

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	209	23	48	103	7	28	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0001g0007	0/0	4	0	2	0	1	1	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0001g0023	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0001g0035	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0001g0039	0/0	1	0	0	0	1	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0009g0019	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0010g0020	0/0	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0011g0021	0/0	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0015g0026	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0001t0016g0027	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0006t0001g0011	0/0	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0011t0001g0022	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0014t0001g0034	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0016t0001g0024	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0018t0001g0029	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0001c0019t0001g0030	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0002c0002t0001g0002	0/1	93	14	18	46	3	11	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0002c0002t0001g0014	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0002c0002t0001g0036	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0002c0002t0004g0009	0/0	3	0	1	0	2	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0002c0009t0007g0017	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0003c0003t0001g0003	1/0	32	0	5	20	3	3	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0003c0003t0001g0037	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0003c0003t0014g0033	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0003c0003t0017g0040	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0003c0012t0001g0032	0/0	1	0	1	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0001g0008	0/0	4	3	0	0	0	1	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0001g0015	0/0	2	1	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0002g0005	0/0	7	7	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0003g0006	0/0	7	7	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0005g0010	0/0	3	3	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0008g0018	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0012g0031	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0013g0038	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0019g0042	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0020g0043	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0004t0022g0045	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0007t0006g0012	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0015t0021g0044	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0004c0020t0018g0041	0/0	1	1	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0005c0005t0001g0004	0/0	9	6	3	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0006c0008t0001g0013	0/0	2	2	0	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0007c0010t0001g0016	0/0	2	0	2	0	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0008c0017t0001g0028	0/0	1	0	0	0	1	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
a0009c0013t0001g0025	0/0	1	0	0	1	0	0	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0007	EUR	GBR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00099	hp2	a0002	c0002	t0001	g0002	EUR	GBR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00140	hp1	a0003	c0003	t0001	g0003	EUR	GBR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00140	hp2	a0002	c0002	t0004	g0009	EUR	GBR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00280	hp2	a0003	c0003	t0001	g0003	EUR	FIN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00323	hp1	a0002	c0002	t0001	g0002	EUR	FIN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00323	hp2	a0002	c0002	t0004	g0009	EUR	FIN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00408	hp1	a0002	c0002	t0001	g0002	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00597	hp1	a0002	c0002	t0001	g0002	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00597	hp2	a0002	c0002	t0001	g0002	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00609	hp1	a0002	c0002	t0001	g0002	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00609	hp2	a0002	c0002	t0001	g0002	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00621	hp1	a0002	c0002	t0001	g0002	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00621	hp2	a0002	c0002	t0001	g0002	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00639	hp2	a0003	c0012	t0001	g0032	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00642	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00673	hp1	a0002	c0002	t0001	g0002	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00733	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00735	hp1	a0003	c0003	t0001	g0003	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00735	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01069	hp1	a0003	c0003	t0001	g0003	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01070	hp1	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01070	hp2	a0005	c0005	t0001	g0004	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01071	hp1	a0003	c0003	t0001	g0003	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01071	hp2	a0005	c0005	t0001	g0004	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01099	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01106	hp1	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01106	hp2	a0001	c0001	t0010	g0020	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01167	hp2	a0001	c0001	t0001	g0007	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01168	hp2	a0007	c0010	t0001	g0016	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01169	hp1	a0001	c0001	t0001	g0007	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01169	hp2	a0007	c0010	t0001	g0016	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01175	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01192	hp1	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01243	hp1	a0003	c0003	t0001	g0003	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01243	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01255	hp1	a0002	c0002	t0001	g0002	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01256	hp2	a0002	c0002	t0001	g0002	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01257	hp1	a0002	c0002	t0001	g0002	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01258	hp1	a0002	c0002	t0001	g0002	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01258	hp2	a0002	c0002	t0001	g0002	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01261	hp2	a0005	c0005	t0001	g0004	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01358	hp2	a0002	c0002	t0001	g0002	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01433	hp1	a0002	c0002	t0001	g0002	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01515	hp1	a0008	c0017	t0001	g0028	EUR	IBS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01884	hp1	a0004	c0020	t0018	g0041	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01884	hp2	a0002	c0002	t0001	g0002	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01891	hp1	a0004	c0004	t0001	g0008	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01891	hp2	a0001	c0001	t0001	g0035	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01934	hp2	a0003	c0003	t0001	g0003	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01975	hp2	a0001	c0001	t0011	g0021	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01978	hp1	a0002	c0002	t0001	g0002	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01978	hp2	a0001	c0006	t0001	g0011	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01981	hp2	a0001	c0006	t0001	g0011	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02015	hp2	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02027	hp1	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02040	hp1	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02055	hp1	a0002	c0002	t0001	g0002	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02056	hp1	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02056	hp2	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02071	hp1	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02074	hp1	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02080	hp1	a0003	c0003	t0001	g0003	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02080	hp2	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02083	hp1	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02083	hp2	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02129	hp1	a0003	c0003	t0001	g0037	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02129	hp2	a0002	c0002	t0001	g0002	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02135	hp1	a0003	c0003	t0001	g0003	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02145	hp1	a0004	c0004	t0002	g0005	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02148	hp1	a0002	c0002	t0004	g0009	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02155	hp2	a0002	c0002	t0001	g0002	EAS	CDX	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02257	hp1	a0005	c0005	t0001	g0004	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02257	hp2	a0002	c0002	t0001	g0002	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02258	hp2	a0004	c0007	t0006	g0012	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02280	hp1	a0004	c0004	t0003	g0006	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02280	hp2	a0004	c0015	t0021	g0044	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02572	hp1	a0004	c0004	t0001	g0015	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02572	hp2	a0004	c0004	t0001	g0008	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02622	hp1	a0002	c0002	t0001	g0002	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02622	hp2	a0004	c0004	t0002	g0005	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02630	hp1	a0002	c0002	t0001	g0002	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02630	hp2	a0002	c0002	t0001	g0002	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02647	hp1	a0004	c0004	t0008	g0018	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02647	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02698	hp2	a0003	c0003	t0001	g0003	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02723	hp1	a0001	c0018	t0001	g0029	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02735	hp2	a0002	c0002	t0001	g0002	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02809	hp1	a0002	c0002	t0001	g0014	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02809	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02818	hp2	a0006	c0008	t0001	g0013	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02886	hp1	a0004	c0004	t0002	g0005	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02886	hp2	a0002	c0002	t0001	g0002	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02895	hp2	a0004	c0004	t0003	g0006	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02896	hp1	a0002	c0009	t0007	g0017	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02896	hp2	a0005	c0005	t0001	g0004	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02897	hp1	a0004	c0004	t0003	g0006	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02897	hp2	a0002	c0009	t0007	g0017	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02922	hp1	a0002	c0002	t0001	g0002	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02922	hp2	a0006	c0008	t0001	g0013	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02970	hp1	a0004	c0004	t0001	g0008	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02976	hp2	a0002	c0002	t0001	g0002	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03041	hp1	a0002	c0002	t0001	g0036	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03041	hp2	a0001	c0011	t0001	g0022	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03098	hp1	a0002	c0002	t0001	g0002	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03098	hp2	a0004	c0004	t0022	g0045	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03130	hp1	a0004	c0004	t0002	g0005	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03130	hp2	a0004	c0004	t0003	g0006	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03139	hp1	a0004	c0004	t0003	g0006	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03209	hp1	a0004	c0007	t0006	g0012	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03209	hp2	a0005	c0005	t0001	g0004	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03225	hp1	a0005	c0005	t0001	g0004	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03225	hp2	a0004	c0004	t0005	g0010	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03453	hp1	a0004	c0004	t0008	g0018	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03490	hp2	a0002	c0002	t0001	g0002	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03491	hp1	a0003	c0003	t0001	g0003	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03540	hp2	a0001	c0014	t0001	g0034	AFR	GWD	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03579	hp1	a0004	c0004	t0005	g0010	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03579	hp2	a0002	c0002	t0001	g0014	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03654	hp1	a0002	c0002	t0001	g0002	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03669	hp2	a0004	c0004	t0001	g0008	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03704	hp2	a0002	c0002	t0001	g0002	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03710	hp1	a0002	c0002	t0001	g0002	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03710	hp2	a0002	c0002	t0001	g0002	SAS	PJL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03834	hp2	a0002	c0002	t0001	g0002	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03927	hp1	a0002	c0002	t0001	g0002	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03927	hp2	a0001	c0001	t0001	g0007	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03942	hp2	a0003	c0003	t0001	g0003	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG04115	hp2	a0002	c0002	t0001	g0002	SAS	STU	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG04184	hp1	a0002	c0002	t0001	g0002	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG04184	hp2	a0002	c0002	t0001	g0002	SAS	BEB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18522	hp1	a0005	c0005	t0001	g0004	AFR	YRI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18522	hp2	a0004	c0004	t0002	g0005	AFR	YRI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18747	hp1	a0002	c0002	t0001	g0002	EAS	CHB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18906	hp1	a0004	c0004	t0019	g0042	AFR	YRI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18906	hp2	a0004	c0004	t0020	g0043	AFR	YRI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18942	hp2	a0001	c0019	t0001	g0030	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18943	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18945	hp2	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18947	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18947	hp2	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18949	hp1	a0004	c0004	t0001	g0015	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18951	hp2	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18952	hp1	a0001	c0001	t0009	g0019	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18960	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18961	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18962	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18962	hp2	a0001	c0001	t0015	g0026	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18963	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18964	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18965	hp2	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18966	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18969	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18970	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18973	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18977	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18977	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18978	hp2	a0003	c0003	t0014	g0033	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18979	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18979	hp2	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18980	hp1	a0001	c0001	t0016	g0027	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18984	hp2	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18989	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18990	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18993	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18994	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18994	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18997	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18997	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18998	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19000	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19004	hp2	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19007	hp1	a0009	c0013	t0001	g0025	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19009	hp1	a0001	c0001	t0001	g0023	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19009	hp2	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19030	hp1	a0002	c0002	t0001	g0002	AFR	LWK	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19057	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19058	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19060	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19063	hp1	a0001	c0016	t0001	g0024	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19066	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19068	hp1	a0003	c0003	t0017	g0040	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19074	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19078	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19079	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19081	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19081	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19082	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19083	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19083	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19089	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19090	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA19240	hp2	a0004	c0004	t0003	g0006	AFR	YRI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20129	hp2	a0005	c0005	t0001	g0004	AFR	ASW	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20752	hp1	a0002	c0002	t0001	g0002	EUR	TSI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20805	hp1	a0001	c0001	t0001	g0039	EUR	TSI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20805	hp2	a0003	c0003	t0001	g0003	EUR	TSI	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG01123	hp2	a0002	c0002	t0001	g0002	AMR	CLM	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02109	hp2	a0004	c0004	t0013	g0038	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02486	hp1	a0004	c0004	t0003	g0006	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02486	hp2	a0002	c0002	t0001	g0002	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02559	hp1	a0004	c0004	t0012	g0031	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03471	hp1	a0004	c0004	t0005	g0010	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG03471	hp2	a0004	c0004	t0002	g0005	AFR	MSL	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG06807	hp1	a0004	c0004	t0002	g0005	AFR	USA	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
HG06807	hp2	a0002	c0002	t0001	g0002	AFR	USA	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18955	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA18955	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
NA20300	hp2	a0002	c0002	t0001	g0002	AFR	USA	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
homoSapiens_chm13v2	hp1	a0002	c0002	t0001	g0002	REF	REF	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252
homoSapiens_grch38	hp1	a0003	c0003	t0001	g0003	REF	REF	SIX5_chr19_45759785_45774252	SIX5	chr19	45759785	45774252

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr19:45765644	C C	T T	2	a0002 a0007 a0002 a0007	103	HG00099.hp2 HG00140.hp2 HG00323.hp1 others(100): Show HG00099.hp2 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG01070.hp1 HG01099.hp2 HG01106.hp1 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01358.hp2 HG01433.hp1 HG01884.hp2 HG01978.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02257.hp2 HG02486.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02735.hp2 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03490.hp2 HG03579.hp2 HG03654.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG06807.hp2 NA18747.hp1 NA18947.hp1 NA18960.hp2 NA18963.hp1 NA18966.hp2 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18977.hp1 NA18979.hp1 NA18989.hp2 NA18990.hp2 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA19030.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp2 NA19066.hp2 NA19074.hp1 NA19078.hp2 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19090.hp1 NA20300.hp2 NA20752.hp1 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.2077G>A c.2077G>A	p.Val693Met p.Val693Met	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	2485/3344	2077/2220	693/739	chr19	45765644
chr19:45765818	G G	A A	3	a0001 a0008 a0009 a0001 a0008 a0009	230	HG00099.hp1 HG00280.hp1 HG00408.hp2 others(227): Show HG00099.hp1 HG00280.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02895.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03139.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03490.hp1 HG03491.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18955.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18990.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp2 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	missense_variant	MODERATE	c.1903C>T c.1903C>T	p.Pro635Ser p.Pro635Ser	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	2311/3344	1903/2220	635/739	chr19	45765818
chr19:45765938	C C	T T	2	a0005 a0006 a0005 a0006	11	HG01070.hp2 HG01071.hp2 HG01261.hp2 others(8): Show HG01070.hp2 HG01071.hp2 HG01261.hp2 HG02257.hp1 HG02818.hp2 HG02896.hp2 HG02922.hp2 HG03209.hp2 HG03225.hp1 NA18522.hp1 NA20129.hp2	missense_variant	MODERATE	c.1783G>A c.1783G>A	p.Val595Met p.Val595Met	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	2191/3344	1783/2220	595/739	chr19	45765938
chr19:45766055	G G	C C	8	a0001 a0002 a0004 others(5): Show a0001 a0002 a0004 a0005 a0006 a0007 a0008 a0009	378	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(375): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18955.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp2 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18993.hp2 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.1666C>G c.1666C>G	p.Leu556Val p.Leu556Val	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	2074/3344	1666/2220	556/739	chr19	45766055
chr19:45766066	G G	A A	1	a0007 a0007	2	HG01168.hp2 HG01169.hp2 HG01168.hp2 HG01169.hp2	missense_variant	MODERATE	c.1655C>T c.1655C>T	p.Thr552Met p.Thr552Met	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	2063/3344	1655/2220	552/739	chr19	45766066
chr19:45766461	CGGCTGCC others(31): Show CGGCTGCCAACAGCTGCAGGGGCCCCACAGCCTGGGGCA	C C	1	a0009 a0009	1	NA19007.hp1 NA19007.hp1	frameshift_variant	HIGH	c.1460_1497delTGCCCC others(32): Show c.1460_1497delTGCCCCAGGCTGTGGGGCCCCTGCAGCTGTTGGCAG CC	p.Leu487fs p.Leu487fs	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	2/3	1905/3344	1460/2220	487/739	chr19	45766461
chr19:45766510	C C	G G	1	a0006 a0006	2	HG02818.hp2 HG02922.hp2 HG02818.hp2 HG02922.hp2	missense_variant	MODERATE	c.1449G>C c.1449G>C	p.Gln483His p.Gln483His	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	2/3	1857/3344	1449/2220	483/739	chr19	45766510
chr19:45766593	G G	A A	1	a0008 a0008	1	HG01515.hp1 HG01515.hp1	missense_variant	MODERATE	c.1366C>T c.1366C>T	p.Leu456Phe p.Leu456Phe	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	2/3	1774/3344	1366/2220	456/739	chr19	45766593

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr19:45765548	G G	A A	1	a0004c0015 a0004c0015	1	HG02280.hp2 HG02280.hp2	synonymous_variant	LOW	c.2173C>T c.2173C>T	p.Leu725Leu p.Leu725Leu	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	2581/3344	2173/2220	725/739	chr19	45765548
chr19:45765758	G G	A A	1	a0002c0009 a0002c0009	2	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	synonymous_variant	LOW	c.1963C>T c.1963C>T	p.Leu655Leu p.Leu655Leu	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	2371/3344	1963/2220	655/739	chr19	45765758
chr19:45765987	C C	T T	1	a0001c0014 a0001c0014	1	HG03540.hp2 HG03540.hp2	synonymous_variant	LOW	c.1734G>A c.1734G>A	p.Pro578Pro p.Pro578Pro	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	2142/3344	1734/2220	578/739	chr19	45765987
chr19:45766423	G G	A A	1	a0001c0016 a0001c0016	1	NA19063.hp1 NA19063.hp1	synonymous_variant	LOW	c.1536C>T c.1536C>T	p.Gly512Gly p.Gly512Gly	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	2/3	1944/3344	1536/2220	512/739	chr19	45766423
chr19:45766695	G G	A A	1	a0001c0018 a0001c0018	1	HG02723.hp1 HG02723.hp1	synonymous_variant	LOW	c.1264C>T c.1264C>T	p.Leu422Leu p.Leu422Leu	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	2/3	1672/3344	1264/2220	422/739	chr19	45766695
chr19:45766921	G G	A A	1	a0001c0019 a0001c0019	1	NA18942.hp2 NA18942.hp2	synonymous_variant	LOW	c.1038C>T c.1038C>T	p.Asn346Asn p.Asn346Asn	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	2/3	1446/3344	1038/2220	346/739	chr19	45766921
chr19:45766945	G G	T T	1	a0003c0012 a0003c0012	1	HG00639.hp2 HG00639.hp2	synonymous_variant	LOW	c.1014C>A c.1014C>A	p.Leu338Leu p.Leu338Leu	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	2/3	1422/3344	1014/2220	338/739	chr19	45766945
chr19:45768296	C C	T T	1	a0001c0011 a0001c0011	1	HG03041.hp2 HG03041.hp2	synonymous_variant	LOW	c.549G>A c.549G>A	p.Val183Val p.Val183Val	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	957/3344	549/2220	183/739	chr19	45768296
chr19:45768470	C C	G G	1	a0004c0007 a0004c0007	2	HG02258.hp2 HG03209.hp1 HG02258.hp2 HG03209.hp1	synonymous_variant	LOW	c.375G>C c.375G>C	p.Pro125Pro p.Pro125Pro	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	783/3344	375/2220	125/739	chr19	45768470
chr19:45768632	C C	A A	1	a0004c0020 a0004c0020	1	HG01884.hp1 HG01884.hp1	synonymous_variant	LOW	c.213G>T c.213G>T	p.Gly71Gly p.Gly71Gly	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	621/3344	213/2220	71/739	chr19	45768632
chr19:45768737	C C	T T	1	a0001c0006 a0001c0006	2	HG01978.hp2 HG01981.hp2 HG01978.hp2 HG01981.hp2	synonymous_variant	LOW	c.108G>A c.108G>A	p.Leu36Leu p.Leu36Leu	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	516/3344	108/2220	36/739	chr19	45768737

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr19:45764889	C C	T T	1	a0002c0009t0007 a0002c0009t0007	2	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	3_prime_UTR_variant	MODIFIER	c.612G>A c.612G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	612	chr19	45764889
chr19:45764930	G G	A A	1	a0001c0001t0016 a0001c0001t0016	1	NA18980.hp1 NA18980.hp1	3_prime_UTR_variant	MODIFIER	c.571C>T c.571C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	571	chr19	45764930
chr19:45765049	G G	A A	1	a0004c0004t0020 a0004c0004t0020	1	NA18906.hp2 NA18906.hp2	3_prime_UTR_variant	MODIFIER	c.452C>T c.452C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	452	chr19	45765049
chr19:45765170	G G	A A	4	a0004c0004t0003 a0004c0004t0005 a0004c0004t0013 others(1): Show a0004c0004t0003 a0004c0004t0005 a0004c0004t0013 a0004c0007t0006	13	HG02109.hp2 HG02258.hp2 HG02280.hp1 others(10): Show HG02109.hp2 HG02258.hp2 HG02280.hp1 HG02486.hp1 HG02895.hp2 HG02897.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03579.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.331C>T c.331C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	331	chr19	45765170
chr19:45765195	C C	T T	4	a0004c0004t0003 a0004c0004t0012 a0004c0004t0013 others(1): Show a0004c0004t0003 a0004c0004t0012 a0004c0004t0013 a0004c0007t0006	11	HG02109.hp2 HG02258.hp2 HG02280.hp1 others(8): Show HG02109.hp2 HG02258.hp2 HG02280.hp1 HG02486.hp1 HG02559.hp1 HG02895.hp2 HG02897.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.306G>A c.306G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	306	chr19	45765195
chr19:45765251	C C	T T	1	a0001c0001t0015 a0001c0001t0015	1	NA18962.hp2 NA18962.hp2	3_prime_UTR_variant	MODIFIER	c.250G>A c.250G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	250	chr19	45765251
chr19:45765287	C C	G G	1	a0003c0003t0014 a0003c0003t0014	1	NA18978.hp2 NA18978.hp2	3_prime_UTR_variant	MODIFIER	c.214G>C c.214G>C	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	214	chr19	45765287
chr19:45765396	G G	A A	1	a0002c0002t0004 a0002c0002t0004	3	HG00140.hp2 HG00323.hp2 HG02148.hp1 HG00140.hp2 HG00323.hp2 HG02148.hp1	3_prime_UTR_variant	MODIFIER	c.105C>T c.105C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	105	chr19	45765396
chr19:45765456	C C	T T	5	a0004c0004t0003 a0004c0004t0005 a0004c0004t0012 others(2): Show a0004c0004t0003 a0004c0004t0005 a0004c0004t0012 a0004c0004t0013 a0004c0015t0021	13	HG02109.hp2 HG02280.hp1 HG02280.hp2 others(10): Show HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02895.hp2 HG02897.hp1 HG03130.hp2 HG03139.hp1 HG03225.hp2 HG03471.hp1 HG03579.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.45G>A c.45G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	45	chr19	45765456
chr19:45765457	G G	A A	1	a0004c0015t0021 a0004c0015t0021	1	HG02280.hp2 HG02280.hp2	3_prime_UTR_variant	MODIFIER	c.44C>T c.44C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	3/3	44	chr19	45765457
chr19:45768866	C C	T T	1	a0001c0001t0011 a0001c0001t0011	1	HG01975.hp2 HG01975.hp2	5_prime_UTR_variant	MODIFIER	c.-22G>A c.-22G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	22	chr19	45768866
chr19:45768889	C C	T T	1	a0004c0004t0019 a0004c0004t0019	1	NA18906.hp1 NA18906.hp1	5_prime_UTR_variant	MODIFIER	c.-45G>A c.-45G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	45	chr19	45768889
chr19:45768903	C C	T T	1	a0004c0004t0008 a0004c0004t0008	2	HG02647.hp1 HG03453.hp1 HG02647.hp1 HG03453.hp1	5_prime_UTR_variant	MODIFIER	c.-59G>A c.-59G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	59	chr19	45768903
chr19:45768918	G G	A A	1	a0004c0004t0022 a0004c0004t0022	1	HG03098.hp2 HG03098.hp2	5_prime_UTR_variant	MODIFIER	c.-74C>T c.-74C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	74	chr19	45768918
chr19:45768919	T T	TC TC	7	a0003c0003t0017 a0004c0004t0002 a0004c0004t0008 others(4): Show a0003c0003t0017 a0004c0004t0002 a0004c0004t0008 a0004c0004t0019 a0004c0004t0020 a0004c0004t0022 a0004c0015t0021	14	HG02145.hp1 HG02280.hp2 HG02622.hp2 others(11): Show HG02145.hp1 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG03098.hp2 HG03130.hp1 HG03453.hp1 HG03471.hp2 HG06807.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA19068.hp1	5_prime_UTR_variant	MODIFIER	c.-76dupG c.-76dupG	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	76	chr19	45768919
chr19:45768952	C C	A A	1	a0002c0009t0007 a0002c0009t0007	2	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	5_prime_UTR_variant	MODIFIER	c.-108G>T c.-108G>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	108	chr19	45768952
chr19:45768986	C C	A A	1	a0004c0004t0005 a0004c0004t0005	3	HG03225.hp2 HG03471.hp1 HG03579.hp1 HG03225.hp2 HG03471.hp1 HG03579.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-142G>T c.-142G>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3		chr19	45768986
chr19:45768992	G G	A A	7	a0004c0004t0002 a0004c0004t0008 a0004c0004t0019 others(4): Show a0004c0004t0002 a0004c0004t0008 a0004c0004t0019 a0004c0004t0020 a0004c0004t0022 a0004c0015t0021 a0004c0020t0018	14	HG01884.hp1 HG02145.hp1 HG02280.hp2 others(11): Show HG01884.hp1 HG02145.hp1 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG03098.hp2 HG03130.hp1 HG03453.hp1 HG03471.hp2 HG06807.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2	5_prime_UTR_variant	MODIFIER	c.-148C>T c.-148C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	148	chr19	45768992
chr19:45769007	T T	C C	1	a0004c0004t0003 a0004c0004t0003	7	HG02280.hp1 HG02486.hp1 HG02895.hp2 others(4): Show HG02280.hp1 HG02486.hp1 HG02895.hp2 HG02897.hp1 HG03130.hp2 HG03139.hp1 NA19240.hp2	5_prime_UTR_variant	MODIFIER	c.-163A>G c.-163A>G	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	163	chr19	45769007
chr19:45769013	C C	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01106.hp2 HG01106.hp2	5_prime_UTR_variant	MODIFIER	c.-169G>A c.-169G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	169	chr19	45769013
chr19:45769050	C C	T T	1	a0001c0001t0009 a0001c0001t0009	1	NA18952.hp1 NA18952.hp1	5_prime_UTR_variant	MODIFIER	c.-206G>A c.-206G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/3	206	chr19	45769050

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr19:45766287	C C	G G	6	a0004c0004t0002g0005 a0004c0004t0008g0018 a0004c0004t0019g0042 others(3): Show a0004c0004t0002g0005 a0004c0004t0008g0018 a0004c0004t0019g0042 a0004c0004t0020g0043 a0004c0004t0022g0045 a0004c0015t0021g0044	13	HG02145.hp1 HG02280.hp2 HG02622.hp2 others(10): Show HG02145.hp1 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG03098.hp2 HG03130.hp1 HG03453.hp1 HG03471.hp2 HG06807.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2	intron_variant	MODIFIER	c.1609+63G>C c.1609+63G>C	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	2/2	chr19	45766287
chr19:45767308	G G	A A	1	a0002c0002t0001g0036 a0002c0002t0001g0036	1	HG03041.hp1 HG03041.hp1	intron_variant	MODIFIER	c.804-153C>T c.804-153C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45767308
chr19:45767382	C C	T T	5	a0002c0009t0007g0017 a0004c0004t0003g0006 a0004c0004t0012g0031 others(2): Show a0002c0009t0007g0017 a0004c0004t0003g0006 a0004c0004t0012g0031 a0004c0004t0013g0038 a0004c0007t0006g0012	13	HG02109.hp2 HG02258.hp2 HG02280.hp1 others(10): Show HG02109.hp2 HG02258.hp2 HG02280.hp1 HG02486.hp1 HG02559.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG03130.hp2 HG03139.hp1 HG03209.hp1 NA19240.hp2	intron_variant	MODIFIER	c.804-227G>A c.804-227G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45767382
chr19:45767421	C C	A A	1	a0003c0003t0001g0037 a0003c0003t0001g0037	1	HG02129.hp1 HG02129.hp1	intron_variant	MODIFIER	c.804-266G>T c.804-266G>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45767421
chr19:45767844	C C	A A	1	a0004c0004t0013g0038 a0004c0004t0013g0038	1	HG02109.hp2 HG02109.hp2	intron_variant	MODIFIER	c.803+198G>T c.803+198G>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45767844
chr19:45767881	A A	G G	1	a0001c0016t0001g0024 a0001c0016t0001g0024	1	NA19063.hp1 NA19063.hp1	intron_variant	MODIFIER	c.803+161T>C c.803+161T>C	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45767881
chr19:45767889	C C	T T	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	NA19009.hp1 NA19009.hp1	intron_variant	MODIFIER	c.803+153G>A c.803+153G>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45767889
chr19:45767919	G G	T T	20	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0023 others(17): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0023 a0001c0001t0001g0039 a0001c0001t0009g0019 a0001c0001t0010g0020 a0001c0001t0011g0021 a0001c0001t0015g0026 a0001c0001t0016g0027 a0001c0006t0001g0011 a0001c0011t0001g0022 a0001c0016t0001g0024 a0001c0018t0001g0029 a0001c0019t0001g0030 a0002c0002t0001g0014 a0004c0004t0001g0008 a0005c0005t0001g0004 a0006c0008t0001g0013 a0008c0017t0001g0028 a0009c0013t0001g0025	245	HG00099.hp1 HG00280.hp1 HG00408.hp2 others(242): Show HG00099.hp1 HG00280.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03490.hp1 HG03491.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18955.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18990.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp2 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.803+123C>A c.803+123C>A	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45767919
chr19:45767979	A A	G G	1	a0001c0001t0001g0007 a0001c0001t0001g0007	4	HG00099.hp1 HG01167.hp2 HG01169.hp1 others(1): Show HG00099.hp1 HG01167.hp2 HG01169.hp1 HG03927.hp2	intron_variant	MODIFIER	c.803+63T>C c.803+63T>C	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45767979
chr19:45768026	G G	A A	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	NA20805.hp1 NA20805.hp1	intron_variant	MODIFIER	c.803+16C>T c.803+16C>T	SIX5	ENSG00000177045.11	transcript	ENST00000317578.7	protein_coding	1/2	chr19	45768026

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🧬 JoGo Online Haplotype Explorer SIX5_chr19_45759785_45774252

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 20)

TTranscript Level Haplotype Info (Total: 22)

GGenebody Level Haplotype Info (Total: 45)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 20)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 37)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 45)

Haplotype Details by Sample (Haploid Level) (Total: 414)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 8)

CCoding Level Variants (Synonymous Mutations) (Total: 11)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 21)

GGenebody Level Haplotype Variants (Intron) (Total: 10)

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Annotation (Repeats)

Annotation (SNP Array)