JoGo: Joint Open Genome and Omics Platform

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geneid	275
ensemblid	ENSG00000145020.16
hgncid	473
symbol	AMT
name	aminomethyltransferase
refseq_nuc	NM_000481.4
refseq_prot	NP_000472.2
ensembl_nuc	ENST00000273588.9
ensembl_prot	ENSP00000273588.3
mane_status	MANE Select
chr	chr3
start	49416778
end	49422473
strand	-
ver	v1.2
region	chr3:49416778-49422473
region5000	chr3:49411778-49427473
regionname0	AMT_chr3_49416778_49422473
regionname5000	AMT_chr3_49411778_49427473

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	403	345	89	71	129	18	36	90	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0002	0/0	403	4	0	4	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0003	0/0	403	2	0	0	2	0	0	2	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0004	0/0	403	1	0	0	1	0	0	1	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0005	0/0	403	1	1	0	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0006	0/0	403	1	0	0	1	0	0	1	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0007	0/0	403	1	1	0	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0008	0/0	403	1	0	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0009	0/0	403	1	0	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0010	0/0	403	1	1	0	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1212	266	71	49	107	10	27	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0002	0/0	1212	79	18	22	22	8	9	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0003	0/0	1212	4	0	4	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0004	0/0	1212	2	0	0	2	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0005	0/0	1212	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0006	0/0	1212	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0007	0/0	1212	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0008	0/0	1212	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0009	0/0	1212	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0010	0/0	1212	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
c0011	0/0	1212	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	786	271	72	53	109	10	25	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
t0002	0/0	786	82	19	22	24	8	9	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
t0003	0/0	786	2	0	0	0	0	2	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
t0004	0/0	786	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
t0005	0/0	786	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
t0006	0/0	786	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	142	8	28	84	3	18	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0002	0/0	52	16	12	11	6	7	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0003	1/0	34	20	8	0	3	2	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0004	0/0	29	4	5	17	0	3	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0005	0/0	16	0	2	10	2	2	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0006	0/0	11	10	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0007	0/0	11	9	2	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0008	0/0	7	0	7	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0009	0/0	7	7	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0010	0/0	5	0	1	2	2	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0011	0/0	4	2	1	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0012	0/0	4	4	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0013	0/0	3	0	3	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0014	0/0	2	0	0	0	2	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0015	0/0	2	1	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0016	0/0	2	2	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0017	0/0	2	0	0	2	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0018	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0019	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0020	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0021	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0022	0/0	1	0	0	0	0	1	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0023	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0024	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0025	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0026	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0027	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0028	0/0	1	0	0	0	0	1	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0029	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0030	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0031	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0032	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0033	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0034	0/0	1	0	0	0	0	1	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0035	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0036	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0037	0/0	1	0	0	0	0	1	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0038	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0039	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0040	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0041	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
g0042	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1212	266	71	49	107	10	27	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0001c0002	0/0	1212	79	18	22	22	8	9	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0002c0003	0/0	1212	4	0	4	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0003c0004	0/0	1212	2	0	0	2	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0004c0011	0/0	1212	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0005c0005	0/0	1212	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0006c0006	0/0	1212	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0007c0010	0/0	1212	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0008c0008	0/0	1212	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0009c0007	0/0	1212	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0010c0009	0/0	1212	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1997	261	70	48	106	10	25	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0001c0001t0002	0/0	1997	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0001c0001t0003	0/0	1997	2	0	0	0	0	2	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0001c0001t0005	0/0	1997	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0001c0001t0006	0/0	1997	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0001c0002t0002	0/0	1997	79	18	22	22	8	9	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0002c0003t0001	0/0	1997	4	0	4	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0003c0004t0002	0/0	1997	2	0	0	2	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0004c0011t0001	0/0	1997	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0005c0005t0001	0/0	1997	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0006c0006t0001	0/0	1997	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0007c0010t0001	0/0	1997	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0008c0008t0001	0/0	1997	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0009c0007t0001	0/0	1997	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473
a0010c0009t0004	0/0	1997	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	copy fasta	chr3	49411778	49427473

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	142	8	28	84	3	18	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0003	1/0	34	20	8	0	3	2	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0004	0/0	29	4	5	17	0	3	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0006	0/0	11	10	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0007	0/0	11	9	2	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0009	0/0	7	7	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0010	0/0	5	0	1	2	2	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0011	0/0	4	2	1	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0012	0/0	4	4	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0014	0/0	2	0	0	0	2	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0016	0/0	2	2	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0020	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0022	0/0	1	0	0	0	0	1	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0023	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0024	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0028	0/0	1	0	0	0	0	1	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0029	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0032	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0033	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0001g0041	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0002g0027	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0003g0034	0/0	1	0	0	0	0	1	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0003g0037	0/0	1	0	0	0	0	1	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0005g0036	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0001t0006g0038	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0002t0002g0002	0/0	52	16	12	11	6	7	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0002t0002g0005	0/0	16	0	2	10	2	2	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0002t0002g0008	0/0	7	0	7	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0002t0002g0015	0/0	2	1	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0002t0002g0025	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0001c0002t0002g0026	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0002c0003t0001g0013	0/0	3	0	3	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0002c0003t0001g0030	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0003c0004t0002g0017	0/0	2	0	0	2	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0004c0011t0001g0042	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0005c0005t0001g0019	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0006c0006t0001g0031	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0007c0010t0001g0039	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0008c0008t0001g0021	0/0	1	0	1	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0009c0007t0001g0035	0/0	1	0	0	1	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
a0010c0009t0004g0018	0/0	1	1	0	0	0	0	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0002	t0002	g0002	EUR	GBR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00099	hp2	a0001	c0001	t0001	g0010	EUR	GBR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00140	hp1	a0001	c0001	t0001	g0003	EUR	GBR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00140	hp2	a0001	c0002	t0002	g0002	EUR	GBR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00280	hp1	a0001	c0002	t0002	g0002	EUR	FIN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00323	hp1	a0001	c0002	t0002	g0005	EUR	FIN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00544	hp1	a0001	c0001	t0001	g0004	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00544	hp2	a0001	c0002	t0002	g0005	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00597	hp1	a0001	c0001	t0001	g0004	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00597	hp2	a0001	c0001	t0001	g0004	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00621	hp2	a0001	c0001	t0001	g0004	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00639	hp1	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00639	hp2	a0001	c0001	t0005	g0036	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00642	hp1	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00642	hp2	a0002	c0003	t0001	g0013	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00673	hp2	a0001	c0001	t0001	g0004	EAS	CHS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00733	hp1	a0001	c0001	t0001	g0003	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00733	hp2	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00735	hp2	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00738	hp1	a0001	c0002	t0002	g0008	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG00738	hp2	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01069	hp1	a0008	c0008	t0001	g0021	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01069	hp2	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01070	hp1	a0001	c0001	t0001	g0003	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01070	hp2	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01071	hp1	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01071	hp2	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01074	hp1	a0001	c0001	t0001	g0029	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01074	hp2	a0001	c0001	t0001	g0006	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01081	hp2	a0001	c0002	t0002	g0008	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01099	hp1	a0001	c0002	t0002	g0005	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01099	hp2	a0001	c0002	t0002	g0008	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01109	hp1	a0001	c0001	t0001	g0007	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01109	hp2	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01167	hp1	a0001	c0002	t0002	g0002	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01167	hp2	a0001	c0001	t0001	g0010	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01168	hp1	a0002	c0003	t0001	g0030	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01168	hp2	a0001	c0002	t0002	g0025	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01169	hp1	a0001	c0002	t0002	g0008	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01169	hp2	a0001	c0002	t0002	g0005	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01175	hp1	a0001	c0001	t0001	g0011	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01175	hp2	a0001	c0001	t0001	g0004	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01243	hp1	a0001	c0001	t0001	g0007	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01243	hp2	a0001	c0001	t0001	g0023	AMR	PUR	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01255	hp1	a0001	c0001	t0001	g0003	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01256	hp2	a0002	c0003	t0001	g0013	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01257	hp1	a0001	c0002	t0002	g0008	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01258	hp1	a0002	c0003	t0001	g0013	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01258	hp2	a0001	c0002	t0002	g0008	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01261	hp1	a0001	c0001	t0001	g0003	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01261	hp2	a0001	c0001	t0001	g0003	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01433	hp1	a0001	c0002	t0002	g0008	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01433	hp2	a0001	c0001	t0001	g0003	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01515	hp1	a0001	c0002	t0002	g0005	EUR	IBS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01515	hp2	a0001	c0001	t0001	g0010	EUR	IBS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01516	hp1	a0001	c0002	t0002	g0002	EUR	IBS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01516	hp2	a0001	c0001	t0001	g0014	EUR	IBS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01517	hp1	a0001	c0002	t0002	g0002	EUR	IBS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01517	hp2	a0001	c0001	t0001	g0014	EUR	IBS	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01884	hp1	a0001	c0001	t0001	g0024	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01884	hp2	a0001	c0001	t0001	g0006	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01891	hp1	a0001	c0002	t0002	g0002	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01891	hp2	a0001	c0001	t0001	g0004	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01934	hp2	a0001	c0002	t0002	g0002	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01978	hp1	a0001	c0001	t0001	g0004	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01978	hp2	a0001	c0001	t0001	g0004	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01981	hp2	a0001	c0001	t0001	g0003	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02027	hp2	a0001	c0001	t0001	g0011	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02055	hp1	a0001	c0002	t0002	g0002	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02055	hp2	a0007	c0010	t0001	g0039	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02074	hp2	a0001	c0001	t0001	g0004	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02080	hp2	a0001	c0001	t0001	g0004	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02083	hp2	a0001	c0001	t0001	g0032	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02135	hp1	a0001	c0001	t0001	g0004	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02145	hp1	a0001	c0001	t0001	g0009	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02145	hp2	a0001	c0002	t0002	g0002	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02155	hp1	a0009	c0007	t0001	g0035	EAS	CDX	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02257	hp1	a0001	c0001	t0001	g0003	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02257	hp2	a0001	c0001	t0001	g0009	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02258	hp1	a0001	c0001	t0001	g0007	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02280	hp2	a0001	c0002	t0002	g0015	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02293	hp1	a0001	c0001	t0001	g0004	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02293	hp2	a0001	c0001	t0001	g0004	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02300	hp1	a0001	c0001	t0001	g0003	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02451	hp1	a0001	c0001	t0001	g0012	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02451	hp2	a0001	c0001	t0001	g0009	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02572	hp1	a0001	c0001	t0001	g0009	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02572	hp2	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02602	hp2	a0001	c0002	t0002	g0002	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02615	hp2	a0001	c0002	t0002	g0002	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02622	hp1	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02622	hp2	a0001	c0001	t0001	g0007	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02647	hp1	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02647	hp2	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02698	hp2	a0001	c0002	t0002	g0002	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02717	hp1	a0001	c0001	t0001	g0007	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02723	hp1	a0001	c0001	t0002	g0027	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02723	hp2	a0010	c0009	t0004	g0018	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02735	hp1	a0001	c0002	t0002	g0005	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02738	hp1	a0001	c0002	t0002	g0005	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02738	hp2	a0001	c0001	t0003	g0034	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02809	hp1	a0001	c0002	t0002	g0026	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02809	hp2	a0001	c0001	t0001	g0007	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02818	hp1	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02818	hp2	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02886	hp1	a0001	c0001	t0001	g0011	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02886	hp2	a0001	c0002	t0002	g0002	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02895	hp1	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02895	hp2	a0001	c0001	t0001	g0012	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02896	hp1	a0001	c0001	t0001	g0007	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02896	hp2	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02897	hp1	a0001	c0001	t0001	g0007	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02897	hp2	a0001	c0001	t0001	g0012	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02922	hp1	a0001	c0001	t0001	g0009	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02922	hp2	a0001	c0001	t0001	g0007	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02965	hp1	a0001	c0002	t0002	g0002	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02965	hp2	a0001	c0001	t0001	g0006	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02970	hp1	a0001	c0001	t0001	g0040	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02970	hp2	a0001	c0002	t0002	g0002	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02976	hp1	a0001	c0001	t0001	g0006	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02976	hp2	a0001	c0002	t0002	g0002	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03041	hp1	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03041	hp2	a0001	c0001	t0001	g0016	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03098	hp2	a0001	c0001	t0001	g0003	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03130	hp1	a0001	c0001	t0001	g0012	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03130	hp2	a0001	c0002	t0002	g0002	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03139	hp1	a0001	c0001	t0001	g0007	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03139	hp2	a0001	c0001	t0001	g0006	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03195	hp1	a0001	c0001	t0001	g0006	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03195	hp2	a0001	c0001	t0001	g0007	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03225	hp1	a0001	c0001	t0001	g0009	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03225	hp2	a0001	c0001	t0001	g0006	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03239	hp2	a0001	c0001	t0001	g0022	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03486	hp2	a0001	c0002	t0002	g0002	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03516	hp1	a0001	c0001	t0001	g0020	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03540	hp1	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03540	hp2	a0001	c0001	t0001	g0003	AFR	GWD	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03579	hp1	a0001	c0001	t0001	g0003	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03579	hp2	a0001	c0001	t0001	g0004	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03654	hp2	a0001	c0002	t0002	g0002	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03688	hp1	a0001	c0001	t0001	g0003	SAS	STU	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03710	hp1	a0001	c0001	t0003	g0037	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03710	hp2	a0001	c0001	t0001	g0004	SAS	PJL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03831	hp1	a0001	c0002	t0002	g0002	SAS	BEB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03831	hp2	a0001	c0002	t0002	g0002	SAS	BEB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03834	hp1	a0001	c0001	t0001	g0003	SAS	BEB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03834	hp2	a0001	c0002	t0002	g0002	SAS	BEB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03942	hp2	a0001	c0002	t0002	g0002	SAS	BEB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG04199	hp1	a0001	c0001	t0001	g0004	SAS	STU	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG04199	hp2	a0001	c0001	t0001	g0004	SAS	STU	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG04228	hp2	a0001	c0001	t0001	g0028	SAS	STU	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18522	hp1	a0001	c0002	t0002	g0002	AFR	YRI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18522	hp2	a0005	c0005	t0001	g0019	AFR	YRI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18612	hp2	a0001	c0002	t0002	g0002	EAS	CHB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18747	hp1	a0001	c0002	t0002	g0002	EAS	CHB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18906	hp1	a0001	c0001	t0001	g0003	AFR	YRI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18906	hp2	a0001	c0002	t0002	g0002	AFR	YRI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18940	hp1	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18944	hp1	a0001	c0001	t0001	g0010	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18944	hp2	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18947	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18949	hp1	a0004	c0011	t0001	g0042	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18949	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18951	hp1	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18952	hp2	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18954	hp1	a0003	c0004	t0002	g0017	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18963	hp2	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18964	hp1	a0001	c0001	t0001	g0033	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18965	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18968	hp2	a0001	c0001	t0006	g0038	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18973	hp2	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18979	hp1	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18979	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18981	hp1	a0006	c0006	t0001	g0031	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18983	hp2	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18987	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18991	hp1	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18991	hp2	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19000	hp1	a0001	c0002	t0002	g0015	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19000	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19003	hp1	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19003	hp2	a0001	c0001	t0001	g0010	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19004	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19010	hp1	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19010	hp2	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19012	hp1	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19043	hp1	a0001	c0001	t0001	g0003	AFR	LWK	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19043	hp2	a0001	c0001	t0001	g0016	AFR	LWK	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19062	hp1	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19062	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19063	hp2	a0001	c0002	t0002	g0002	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19065	hp2	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19070	hp2	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19077	hp1	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19077	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19079	hp1	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19080	hp2	a0003	c0004	t0002	g0017	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19087	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19090	hp2	a0001	c0002	t0002	g0005	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19240	hp1	a0001	c0001	t0001	g0006	AFR	YRI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA19240	hp2	a0001	c0001	t0001	g0006	AFR	YRI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20129	hp1	a0001	c0001	t0001	g0006	AFR	ASW	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20129	hp2	a0001	c0002	t0002	g0002	AFR	ASW	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20752	hp1	a0001	c0001	t0001	g0003	EUR	TSI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20752	hp2	a0001	c0002	t0002	g0002	EUR	TSI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20805	hp1	a0001	c0001	t0001	g0003	EUR	TSI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02109	hp1	a0001	c0002	t0002	g0002	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02109	hp2	a0001	c0001	t0001	g0011	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02486	hp1	a0001	c0001	t0001	g0041	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02486	hp2	a0001	c0001	t0001	g0003	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02559	hp1	a0001	c0001	t0001	g0004	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG02559	hp2	a0001	c0001	t0001	g0003	AFR	ACB	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG03471	hp2	a0001	c0001	t0001	g0006	AFR	MSL	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG06807	hp1	a0001	c0002	t0002	g0002	AFR	USA	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
HG06807	hp2	a0001	c0001	t0001	g0003	AFR	USA	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20300	hp1	a0001	c0001	t0001	g0004	AFR	USA	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA20300	hp2	a0001	c0002	t0002	g0002	AFR	USA	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA21309	hp1	a0001	c0001	t0001	g0009	AFR	LWK	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
NA21309	hp2	a0001	c0001	t0001	g0003	AFR	LWK	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0003	REF	REF	AMT_chr3_49411778_49427473	AMT	chr3	49411778	49427473

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr3:49417607	C C	T T	1	a0009 a0009	1	HG02155.hp1 HG02155.hp1	missense_variant	MODERATE	c.1145G>A c.1145G>A	p.Arg382Gln p.Arg382Gln	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	9/9	1168/1997	1145/1212	382/403	chr3	49417607
chr3:49417655	G G	A A	1	a0008 a0008	1	HG01069.hp1 HG01069.hp1	missense_variant	MODERATE	c.1097C>T c.1097C>T	p.Pro366Leu p.Pro366Leu	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	9/9	1120/1997	1097/1212	366/403	chr3	49417655
chr3:49417953	T T	C C	1	a0010 a0010	1	HG02723.hp2 HG02723.hp2	missense_variant	MODERATE	c.898A>G c.898A>G	p.Met300Val p.Met300Val	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	8/9	921/1997	898/1212	300/403	chr3	49417953
chr3:49419135	G G	T T	1	a0007 a0007	1	HG02055.hp2 HG02055.hp2	missense_variant	MODERATE	c.713C>A c.713C>A	p.Ala238Glu p.Ala238Glu	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/9	736/1997	713/1212	238/403	chr3	49419135
chr3:49419136	C C	T T	1	a0007 a0007	1	HG02055.hp2 HG02055.hp2	missense_variant	MODERATE	c.712G>A c.712G>A	p.Ala238Thr p.Ala238Thr	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/9	735/1997	712/1212	238/403	chr3	49419136
chr3:49419138	A A	T T	1	a0007 a0007	1	HG02055.hp2 HG02055.hp2	missense_variant	MODERATE	c.710T>A c.710T>A	p.Val237Glu p.Val237Glu	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/9	733/1997	710/1212	237/403	chr3	49419138
chr3:49419139	C C	T T	1	a0007 a0007	1	HG02055.hp2 HG02055.hp2	missense_variant	MODERATE	c.709G>A c.709G>A	p.Val237Ile p.Val237Ile	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/9	732/1997	709/1212	237/403	chr3	49419139
chr3:49419141	G G	A A	1	a0007 a0007	1	HG02055.hp2 HG02055.hp2	missense_variant	MODERATE	c.707C>T c.707C>T	p.Pro236Leu p.Pro236Leu	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/9	730/1997	707/1212	236/403	chr3	49419141
chr3:49419298	C C	T T	1	a0006 a0006	1	NA18981.hp1 NA18981.hp1	missense_variant	MODERATE	c.658G>A c.658G>A	p.Val220Met p.Val220Met	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/9	681/1997	658/1212	220/403	chr3	49419298
chr3:49419300	C C	T T	1	a0005 a0005	1	NA18522.hp2 NA18522.hp2	missense_variant	MODERATE	c.656G>A c.656G>A	p.Arg219His p.Arg219His	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/9	679/1997	656/1212	219/403	chr3	49419300
chr3:49419325	C C	T T	1	a0002 a0002	4	HG00642.hp2 HG01168.hp1 HG01256.hp2 others(1): Show HG00642.hp2 HG01168.hp1 HG01256.hp2 HG01258.hp1	missense_variant	MODERATE	c.631G>A c.631G>A	p.Glu211Lys p.Glu211Lys	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/9	654/1997	631/1212	211/403	chr3	49419325
chr3:49422148	T T	C C	1	a0004 a0004	1	NA18949.hp1 NA18949.hp1	missense_variant	MODERATE	c.214A>G c.214A>G	p.Thr72Ala p.Thr72Ala	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	2/9	237/1997	214/1212	72/403	chr3	49422148
chr3:49422214	C C	A A	1	a0003 a0003	2	NA18954.hp1 NA19080.hp2 NA18954.hp1 NA19080.hp2	missense_variant	MODERATE	c.148G>T c.148G>T	p.Val50Leu p.Val50Leu	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	2/9	171/1997	148/1212	50/403	chr3	49422214

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr3:49417897	C C	T T	2	a0001c0002 a0003c0004 a0001c0002 a0003c0004	81	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(78): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00544.hp2 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01257.hp1 HG01258.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02280.hp2 HG02602.hp2 HG02615.hp2 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp2 HG03486.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18963.hp2 NA18973.hp2 NA18979.hp1 NA18983.hp2 NA18991.hp2 NA19000.hp1 NA19003.hp1 NA19010.hp2 NA19012.hp1 NA19062.hp1 NA19063.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp1 NA19080.hp2 NA19090.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp2	synonymous_variant	LOW	c.954G>A c.954G>A	p.Arg318Arg p.Arg318Arg	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	8/9	977/1997	954/1212	318/403			chr3	49417897
chr3:49419143	C C	A A	1	a0007c0010 a0007c0010	1	HG02055.hp2 HG02055.hp2	synonymous_variant	LOW	c.705G>T c.705G>T	p.Val235Val p.Val235Val	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/9	728/1997	705/1212	235/403			chr3	49419143

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr3:49416844	G G	A A	3	a0001c0001t0002 a0001c0002t0002 a0003c0004t0002 a0001c0001t0002 a0001c0002t0002 a0003c0004t0002	82	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(79): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00544.hp2 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01257.hp1 HG01258.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02280.hp2 HG02602.hp2 HG02615.hp2 HG02698.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp2 HG03486.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18963.hp2 NA18973.hp2 NA18979.hp1 NA18983.hp2 NA18991.hp2 NA19000.hp1 NA19003.hp1 NA19010.hp2 NA19012.hp1 NA19062.hp1 NA19063.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp1 NA19080.hp2 NA19090.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.696C>T c.696C>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	9/9	696	chr3	49416844
chr3:49417122	C C	G G	1	a0001c0001t0005 a0001c0001t0005	1	HG00639.hp2 HG00639.hp2	3_prime_UTR_variant	MODIFIER	c.418G>C c.418G>C	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	9/9	418	chr3	49417122
chr3:49417124	G G	A A	1	a0001c0001t0003 a0001c0001t0003	2	HG02738.hp2 HG03710.hp1 HG02738.hp2 HG03710.hp1	3_prime_UTR_variant	MODIFIER	c.416C>T c.416C>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	9/9	416	chr3	49417124
chr3:49417264	T T	G G	1	a0001c0001t0006 a0001c0001t0006	1	NA18968.hp2 NA18968.hp2	3_prime_UTR_variant	MODIFIER	c.276A>C c.276A>C	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	9/9	276	chr3	49417264
chr3:49422451	C C	T T	1	a0010c0009t0004 a0010c0009t0004	1	HG02723.hp2 HG02723.hp2	5_prime_UTR_variant	MODIFIER	c.-1G>A c.-1G>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	1/9	1	chr3	49422451

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr3:49418187	C C	CT CT	4	a0001c0001t0001g0006 a0001c0001t0001g0020 a0001c0001t0001g0023 others(1): Show a0001c0001t0001g0006 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0002g0027	14	HG01074.hp2 HG01243.hp2 HG01884.hp2 others(11): Show HG01074.hp2 HG01243.hp2 HG01884.hp2 HG02723.hp1 HG02965.hp2 HG02976.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03471.hp2 HG03516.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1	intron_variant	MODIFIER	c.878-215dupA c.878-215dupA	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418187
chr3:49418245	C C	T T	2	a0001c0002t0002g0008 a0001c0002t0002g0025 a0001c0002t0002g0008 a0001c0002t0002g0025	8	HG00738.hp1 HG01081.hp2 HG01099.hp2 others(5): Show HG00738.hp1 HG01081.hp2 HG01099.hp2 HG01168.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01433.hp1	intron_variant	MODIFIER	c.878-272G>A c.878-272G>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418245
chr3:49418363	A A	C C	1	a0001c0002t0002g0026 a0001c0002t0002g0026	1	HG02809.hp1 HG02809.hp1	intron_variant	MODIFIER	c.878-390T>G c.878-390T>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418363
chr3:49418476	C C	T T	2	a0002c0003t0001g0013 a0002c0003t0001g0030 a0002c0003t0001g0013 a0002c0003t0001g0030	4	HG00642.hp2 HG01168.hp1 HG01256.hp2 others(1): Show HG00642.hp2 HG01168.hp1 HG01256.hp2 HG01258.hp1	intron_variant	MODIFIER	c.877+495G>A c.877+495G>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418476
chr3:49418477	G G	A A	2	a0001c0001t0001g0012 a0001c0001t0001g0041 a0001c0001t0001g0012 a0001c0001t0001g0041	5	HG02451.hp1 HG02486.hp1 HG02895.hp2 others(2): Show HG02451.hp1 HG02486.hp1 HG02895.hp2 HG02897.hp2 HG03130.hp1	intron_variant	MODIFIER	c.877+494C>T c.877+494C>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418477
chr3:49418494	C C	CT CT	7	a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0023 others(4): Show a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0002t0002g0015	11	HG01175.hp1 HG01243.hp2 HG01884.hp1 others(8): Show HG01175.hp1 HG01243.hp2 HG01884.hp1 HG02027.hp2 HG02109.hp2 HG02280.hp2 HG02486.hp1 HG02886.hp1 HG02970.hp1 HG03516.hp1 NA19000.hp1	intron_variant	MODIFIER	c.877+476dupA c.877+476dupA	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418494
chr3:49418494	C C	CTTTT CTTTT	2	a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0010 a0001c0001t0001g0016	7	HG00099.hp2 HG01167.hp2 HG01515.hp2 others(4): Show HG00099.hp2 HG01167.hp2 HG01515.hp2 HG03041.hp2 NA18944.hp1 NA19003.hp2 NA19043.hp2	intron_variant	MODIFIER	c.877+473_877+476dup others(4): Show c.877+473_877+476dupAAAA	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418494
chr3:49418494	C C	CTTTTT CTTTTT	13	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0028 others(10): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0003g0037 a0001c0001t0005g0036 a0001c0001t0006g0038 a0002c0003t0001g0013 a0004c0011t0001g0042 a0006c0006t0001g0031 a0009c0007t0001g0035	166	HG00280.hp2 HG00323.hp2 HG00408.hp1 others(163): Show HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00735.hp1 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02300.hp2 HG02602.hp1 HG02615.hp1 HG02622.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02809.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03516.hp2 HG03654.hp1 HG03688.hp2 HG03710.hp1 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18947.hp1 NA18949.hp1 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19012.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19079.hp2 NA19080.hp1 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.877+472_877+476dup others(5): Show c.877+472_877+476dupAAAAA	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418494
chr3:49418494	C C	CTTTTTT CTTTTTT	4	a0001c0001t0001g0004 a0001c0001t0003g0034 a0002c0003t0001g0030 others(1): Show a0001c0001t0001g0004 a0001c0001t0003g0034 a0002c0003t0001g0030 a0007c0010t0001g0039	32	HG00544.hp1 HG00597.hp1 HG00597.hp2 others(29): Show HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp2 HG00673.hp2 HG01168.hp1 HG01175.hp2 HG01891.hp2 HG01978.hp1 HG01978.hp2 HG02055.hp2 HG02074.hp2 HG02080.hp2 HG02135.hp1 HG02293.hp1 HG02293.hp2 HG02559.hp1 HG02738.hp2 HG03579.hp2 HG03710.hp2 HG04199.hp1 HG04199.hp2 NA18947.hp2 NA18949.hp2 NA18979.hp2 NA18991.hp1 NA19000.hp2 NA19010.hp1 NA19077.hp1 NA19077.hp2 NA19087.hp2 NA20300.hp1	intron_variant	MODIFIER	c.877+471_877+476dup others(6): Show c.877+471_877+476dupAAAAAA	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418494
chr3:49418494	CT CT	C C	5	a0001c0001t0001g0022 a0001c0002t0002g0002 a0001c0002t0002g0008 others(2): Show a0001c0001t0001g0022 a0001c0002t0002g0002 a0001c0002t0002g0008 a0001c0002t0002g0026 a0003c0004t0002g0017	63	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(60): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01109.hp2 HG01167.hp1 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02602.hp2 HG02615.hp2 HG02698.hp2 HG02809.hp1 HG02886.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp2 HG03239.hp2 HG03486.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18944.hp2 NA18952.hp2 NA18954.hp1 NA18979.hp1 NA18983.hp2 NA19003.hp1 NA19010.hp2 NA19012.hp1 NA19062.hp1 NA19063.hp2 NA19080.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp2	intron_variant	MODIFIER	c.877+476delA c.877+476delA	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418494
chr3:49418553	G G	T T	7	a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0008 others(4): Show a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0008 a0001c0002t0002g0015 a0001c0002t0002g0025 a0001c0002t0002g0026 a0003c0004t0002g0017	81	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(78): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00544.hp2 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01257.hp1 HG01258.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02280.hp2 HG02602.hp2 HG02615.hp2 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp2 HG03486.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18963.hp2 NA18973.hp2 NA18979.hp1 NA18983.hp2 NA18991.hp2 NA19000.hp1 NA19003.hp1 NA19010.hp2 NA19012.hp1 NA19062.hp1 NA19063.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp1 NA19080.hp2 NA19090.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp2	intron_variant	MODIFIER	c.877+418C>A c.877+418C>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418553
chr3:49418586	C C	T T	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	NA18964.hp1 NA18964.hp1	intron_variant	MODIFIER	c.877+385G>A c.877+385G>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418586
chr3:49418597	G G	T T	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG02083.hp2 HG02083.hp2	intron_variant	MODIFIER	c.877+374C>A c.877+374C>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418597
chr3:49418668	A A	AT AT	9	a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0002t0002g0002 others(6): Show a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0008 a0001c0002t0002g0015 a0001c0002t0002g0025 a0001c0002t0002g0026 a0003c0004t0002g0017	83	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(80): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00544.hp2 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01257.hp1 HG01258.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02280.hp2 HG02602.hp2 HG02615.hp2 HG02698.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp2 HG03486.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18963.hp2 NA18973.hp2 NA18979.hp1 NA18983.hp2 NA18991.hp2 NA19000.hp1 NA19003.hp1 NA19010.hp2 NA19012.hp1 NA19062.hp1 NA19063.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp1 NA19080.hp2 NA19090.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp2	intron_variant	MODIFIER	c.877+302dupA c.877+302dupA	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418668
chr3:49418808	A A	G G	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG02970.hp1 HG02970.hp1	intron_variant	MODIFIER	c.877+163T>C c.877+163T>C	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	7/8	chr3	49418808
chr3:49419152	C C	T T	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	splice_acceptor_variant&intron_variant	HIGH	c.697-1G>A c.697-1G>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419152
chr3:49419154	G G	T T	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	splice_region_variant&intron_variant	LOW	c.697-3C>A c.697-3C>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419154
chr3:49419156	A A	T T	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	splice_region_variant&intron_variant	LOW	c.697-5T>A c.697-5T>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419156
chr3:49419160	A A	T T	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-9T>A c.697-9T>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419160
chr3:49419162	C C	A A	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-11G>T c.697-11G>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419162
chr3:49419163	A A	C C	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-12T>G c.697-12T>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419163
chr3:49419165	C C	A A	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-14G>T c.697-14G>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419165
chr3:49419167	G G	A A	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-16C>T c.697-16C>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419167
chr3:49419169	G G	C C	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-18C>G c.697-18C>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419169
chr3:49419170	G G	C C	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-19C>G c.697-19C>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419170
chr3:49419177	G G	C C	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-26C>G c.697-26C>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419177
chr3:49419178	G G	C C	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-27C>G c.697-27C>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419178
chr3:49419182	G G	T T	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-31C>A c.697-31C>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419182
chr3:49419184	T T	C C	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-33A>G c.697-33A>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419184
chr3:49419192	C C	A A	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-41G>T c.697-41G>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419192
chr3:49419195	C C	T T	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-44G>A c.697-44G>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419195
chr3:49419197	T T	C C	1	a0007c0010t0001g0039 a0007c0010t0001g0039	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.697-46A>G c.697-46A>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	6/8	chr3	49419197
chr3:49420030	A A	G G	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.471+181T>C c.471+181T>C	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	4/8	chr3	49420030
chr3:49420036	C C	T T	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG01074.hp1 HG01074.hp1	intron_variant	MODIFIER	c.471+175G>A c.471+175G>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	4/8	chr3	49420036
chr3:49420530	T T	A A	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG01243.hp2 HG01243.hp2	intron_variant	MODIFIER	c.340-188A>T c.340-188A>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	3/8	chr3	49420530
chr3:49420592	C C	G G	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	HG04228.hp2 HG04228.hp2	intron_variant	MODIFIER	c.340-250G>C c.340-250G>C	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	3/8	chr3	49420592
chr3:49420725	C C	T T	1	a0001c0001t0001g0014 a0001c0001t0001g0014	2	HG01516.hp2 HG01517.hp2 HG01516.hp2 HG01517.hp2	intron_variant	MODIFIER	c.340-383G>A c.340-383G>A	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	3/8	chr3	49420725
chr3:49420833	G G	A A	21	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 others(18): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0040 a0001c0001t0003g0034 a0001c0001t0003g0037 a0001c0001t0005g0036 a0001c0001t0006g0038 a0002c0003t0001g0013 a0002c0003t0001g0030 a0004c0011t0001g0042 a0006c0006t0001g0031 a0007c0010t0001g0039 a0009c0007t0001g0035	213	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(210): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp2 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18994.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19012.hp2 NA19043.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.340-491C>T c.340-491C>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	3/8	chr3	49420833
chr3:49420922	G G	C C	9	a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0002t0002g0002 others(6): Show a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0008 a0001c0002t0002g0015 a0001c0002t0002g0025 a0001c0002t0002g0026 a0003c0004t0002g0017	83	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(80): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00544.hp2 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01257.hp1 HG01258.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02280.hp2 HG02602.hp2 HG02615.hp2 HG02698.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp2 HG03486.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18963.hp2 NA18973.hp2 NA18979.hp1 NA18983.hp2 NA18991.hp2 NA19000.hp1 NA19003.hp1 NA19010.hp2 NA19012.hp1 NA19062.hp1 NA19063.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp1 NA19080.hp2 NA19090.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp2	intron_variant	MODIFIER	c.339+570C>G c.339+570C>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	3/8	chr3	49420922
chr3:49421331	G G	A A	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG02970.hp1 HG02970.hp1	intron_variant	MODIFIER	c.339+161C>T c.339+161C>T	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	3/8	chr3	49421331
chr3:49421681	A A	C C	23	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 others(20): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0003g0034 a0001c0001t0003g0037 a0001c0001t0005g0036 a0001c0001t0006g0038 a0002c0003t0001g0013 a0002c0003t0001g0030 a0004c0011t0001g0042 a0006c0006t0001g0031 a0007c0010t0001g0039 a0009c0007t0001g0035	218	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(215): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18994.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19012.hp2 NA19043.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.259-109T>G c.259-109T>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	2/8	chr3	49421681
chr3:49421819	C C	G G	17	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0010 others(14): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0003g0034 a0001c0001t0003g0037 a0001c0001t0005g0036 a0001c0001t0006g0038 a0002c0003t0001g0013 a0002c0003t0001g0030 a0004c0011t0001g0042 a0006c0006t0001g0031 a0007c0010t0001g0039 a0009c0007t0001g0035	192	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(189): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02698.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18994.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19012.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.259-247G>C c.259-247G>C	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	2/8	chr3	49421819
chr3:49421862	T T	C C	2	a0001c0001t0001g0012 a0001c0001t0001g0041 a0001c0001t0001g0012 a0001c0001t0001g0041	5	HG02451.hp1 HG02486.hp1 HG02895.hp2 others(2): Show HG02451.hp1 HG02486.hp1 HG02895.hp2 HG02897.hp2 HG03130.hp1	intron_variant	MODIFIER	c.258+242A>G c.258+242A>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	2/8	chr3	49421862
chr3:49421943	T T	C C	23	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 others(20): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0003g0034 a0001c0001t0003g0037 a0001c0001t0005g0036 a0001c0001t0006g0038 a0002c0003t0001g0013 a0002c0003t0001g0030 a0004c0011t0001g0042 a0006c0006t0001g0031 a0007c0010t0001g0039 a0009c0007t0001g0035	218	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(215): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18994.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19012.hp2 NA19043.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.258+161A>G c.258+161A>G	AMT	ENSG00000145020.16	transcript	ENST00000273588.9	protein_coding	2/8	chr3	49421943

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🧬 JoGo Online Haplotype Explorer AMT_chr3_49411778_49427473

JoGo Local Haplotype Explorer (on iGV) AMT_chr3_49411778_49427473

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ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 10)

CCoding Level Haplotype Info (Total: 11)

TTranscript Level Haplotype Info (Total: 6)

GGenebody Level Haplotype Info (Total: 42)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 11)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 15)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 42)

Haplotype Details by Sample (Haploid Level) (Total: 358)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 13)

CCoding Level Variants (Synonymous Mutations) (Total: 2)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 5)

GGenebody Level Haplotype Variants (Intron) (Total: 44)

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Annotation (Repeats)

Annotation (SNP Array)