Joint Open Genome and Omics Platform (JoGo)

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geneid	28972
ensemblid	ENSG00000114902.14
hgncid	23401
symbol	SPCS1
name	signal peptidase complex subunit 1
refseq_nuc	NM_014041.5
refseq_prot	NP_054760.4
ensembl_nuc	ENST00000619898.5
ensembl_prot	ENSP00000478310.2
mane_status	MANE Select
chr	chr3
start	52706106
end	52711148
strand	+
ver	v1.2
region	chr3:52706106-52711148
region5000	chr3:52701106-52716148
regionname0	SPCS1_chr3_52706106_52711148
regionname5000	SPCS1_chr3_52701106_52716148

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	102	410	92	76	182	16	42	138	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	309	406	92	76	178	16	42	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
c0002	0/0	309	4	0	0	4	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	3477	149	13	28	74	5	28	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0002	0/0	3482	93	1	18	68	2	4	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0003	0/0	3477	17	11	3	0	2	1	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0004	0/0	3477	16	2	9	4	1	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0005	0/0	3483	16	1	2	9	2	2	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0006	0/0	3476	13	13	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0007	0/0	3477	12	12	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0008	0/0	3478	9	0	0	6	1	2	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0009	0/0	3480	9	9	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0010	0/0	3481	8	1	3	4	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0011	0/0	3482	6	6	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0012	1/0	3478	5	4	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0013	0/0	3481	5	0	0	5	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0014	0/0	3469	5	0	3	0	0	2	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0015	0/0	3479	5	4	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0016	0/0	3478	4	0	1	3	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0017	0/0	3476	4	1	0	2	1	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0018	0/0	3480	4	4	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0019	0/0	3478	2	0	2	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0020	0/0	3476	2	0	0	1	1	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0021	0/0	3481	2	2	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0022	0/0	3477	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0023	0/0	3480	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0024	0/0	3477	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0025	0/0	3478	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0026	0/0	3476	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0027	0/0	3477	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0028	0/0	2963	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0029	0/0	3476	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0030	0/0	3477	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0031	0/0	3480	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0032	0/0	3484	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0033	0/0	3473	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0034	0/0	3482	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0035	0/0	3483	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0036	0/0	3478	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0037	0/0	3478	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0038	0/0	3482	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0039	0/0	3481	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0040	0/0	3479	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0041	0/0	3468	1	0	0	0	1	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0042	0/0	3478	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0043	0/0	3479	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0044	0/0	3478	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
t0045	0/0	3478	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	210	32	43	90	11	32	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0002	0/0	176	46	31	85	5	9	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0003	0/0	6	6	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0004	0/0	6	5	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0005	0/0	4	0	0	4	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0006	0/0	2	2	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0007	0/0	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0008	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0009	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0010	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0011	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
g0012	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	309	406	92	76	178	16	42	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0002	0/0	309	4	0	0	4	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	3785	145	13	28	70	5	28	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0002	0/0	3790	93	1	18	68	2	4	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0003	0/0	3785	17	11	3	0	2	1	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0004	0/0	3785	16	2	9	4	1	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0005	0/0	3791	16	1	2	9	2	2	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0006	0/0	3784	13	13	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0007	0/0	3785	12	12	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0008	0/0	3786	9	0	0	6	1	2	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0009	0/0	3788	9	9	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0010	0/0	3789	8	1	3	4	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0011	0/0	3790	6	6	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0012	1/0	3786	5	4	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0013	0/0	3789	5	0	0	5	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0014	0/0	3777	5	0	3	0	0	2	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0015	0/0	3787	5	4	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0016	0/0	3786	4	0	1	3	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0017	0/0	3784	4	1	0	2	1	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0018	0/0	3788	4	4	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0019	0/0	3786	2	0	2	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0020	0/0	3784	2	0	0	1	1	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0021	0/0	3789	2	2	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0022	0/0	3785	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0023	0/0	3788	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0024	0/0	3785	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0025	0/0	3786	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0026	0/0	3784	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0027	0/0	3785	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0028	0/0	3271	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0029	0/0	3784	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0030	0/0	3785	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0031	0/0	3788	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0032	0/0	3792	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0033	0/0	3781	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0034	0/0	3790	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0035	0/0	3791	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0036	0/0	3786	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0037	0/0	3786	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0038	0/0	3790	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0039	0/0	3789	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0040	0/0	3787	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0041	0/0	3776	1	0	0	0	1	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0042	0/0	3786	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0043	0/0	3787	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0044	0/0	3786	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0001t0045	0/0	3786	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148
a0001c0002t0001	0/0	3785	4	0	0	4	0	0	SPCS1_chr3_52701106_52716148	SPCS1	copy fasta	chr3	52701106	52716148

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	142	13	26	69	5	28	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0001g0008	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0001g0010	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0001g0011	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0002g0002	0/0	93	1	18	68	2	4	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0003g0001	0/0	15	9	3	0	2	1	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0003g0006	0/0	2	2	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0004g0001	0/0	16	2	9	4	1	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0005g0002	0/0	16	1	2	9	2	2	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0006g0002	0/0	8	8	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0006g0004	0/0	5	5	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0007g0002	0/0	11	11	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0007g0009	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0008g0001	0/0	8	0	0	5	1	2	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0008g0012	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0009g0002	0/0	9	9	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0010g0002	0/0	7	1	3	3	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0010g0004	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0011g0003	0/0	6	6	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0012g0001	1/0	5	4	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0013g0002	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0013g0005	0/0	4	0	0	4	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0014g0002	0/0	5	0	3	0	0	2	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0015g0002	0/0	5	4	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0016g0001	0/0	4	0	1	3	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0017g0001	0/0	4	1	0	2	1	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0018g0002	0/0	4	4	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0019g0001	0/0	2	0	2	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0020g0001	0/0	2	0	0	1	1	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0021g0002	0/0	2	2	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0022g0001	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0023g0002	0/0	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0024g0001	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0025g0001	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0026g0001	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0027g0001	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0028g0001	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0029g0001	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0030g0001	0/0	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0031g0007	0/0	1	0	0	0	0	1	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0032g0002	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0033g0002	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0034g0002	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0035g0002	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0036g0002	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0037g0002	0/0	1	0	0	1	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0038g0002	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0039g0002	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0040g0002	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0041g0002	0/0	1	0	0	0	1	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0042g0002	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0043g0002	0/0	1	0	1	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0044g0002	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0001t0045g0002	0/0	1	1	0	0	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
a0001c0002t0001g0001	0/0	4	0	0	4	0	0	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00099	hp2	a0001	c0001	t0003	g0001	EUR	GBR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00140	hp1	a0001	c0001	t0003	g0001	EUR	GBR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00323	hp2	a0001	c0001	t0002	g0002	EUR	FIN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00438	hp2	a0001	c0001	t0013	g0005	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00544	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00558	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00597	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00609	hp2	a0001	c0001	t0005	g0002	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00621	hp1	a0001	c0001	t0001	g0011	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00621	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00639	hp2	a0001	c0001	t0038	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00642	hp1	a0001	c0001	t0005	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00673	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00673	hp2	a0001	c0001	t0008	g0001	EAS	CHS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00735	hp1	a0001	c0001	t0004	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00738	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00738	hp2	a0001	c0001	t0004	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00741	hp1	a0001	c0001	t0014	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG00741	hp2	a0001	c0001	t0003	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01069	hp1	a0001	c0001	t0019	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01069	hp2	a0001	c0001	t0039	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01070	hp1	a0001	c0001	t0004	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01070	hp2	a0001	c0001	t0001	g0008	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01071	hp1	a0001	c0001	t0004	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01071	hp2	a0001	c0001	t0019	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01074	hp1	a0001	c0001	t0015	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01081	hp1	a0001	c0001	t0010	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01081	hp2	a0001	c0001	t0004	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01099	hp1	a0001	c0001	t0004	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01099	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01106	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01167	hp2	a0001	c0001	t0014	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01169	hp1	a0001	c0001	t0016	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01169	hp2	a0001	c0001	t0035	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01192	hp1	a0001	c0001	t0010	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01192	hp2	a0001	c0001	t0004	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01243	hp1	a0001	c0001	t0043	g0002	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01243	hp2	a0001	c0001	t0003	g0001	AMR	PUR	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01255	hp1	a0001	c0001	t0004	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01255	hp2	a0001	c0001	t0022	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01257	hp1	a0001	c0001	t0010	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01258	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01261	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01261	hp2	a0001	c0001	t0025	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01346	hp1	a0001	c0001	t0014	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01358	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01358	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01433	hp1	a0001	c0001	t0005	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01433	hp2	a0001	c0001	t0004	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01496	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01515	hp1	a0001	c0001	t0017	g0001	EUR	IBS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01515	hp2	a0001	c0001	t0041	g0002	EUR	IBS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01516	hp2	a0001	c0001	t0005	g0002	EUR	IBS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01517	hp1	a0001	c0001	t0005	g0002	EUR	IBS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01884	hp1	a0001	c0001	t0012	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01884	hp2	a0001	c0001	t0015	g0002	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01891	hp1	a0001	c0001	t0045	g0002	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01891	hp2	a0001	c0001	t0003	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01928	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01934	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01934	hp2	a0001	c0001	t0003	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01975	hp2	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01978	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01981	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01993	hp2	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02004	hp1	a0001	c0001	t0001	g0010	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02015	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02040	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02055	hp2	a0001	c0001	t0004	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02071	hp2	a0001	c0001	t0013	g0005	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02074	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02080	hp1	a0001	c0001	t0005	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02080	hp2	a0001	c0001	t0008	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02083	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02083	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02129	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02132	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02135	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02155	hp2	a0001	c0001	t0010	g0002	EAS	CDX	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02257	hp1	a0001	c0001	t0004	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02257	hp2	a0001	c0001	t0003	g0006	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02258	hp1	a0001	c0001	t0036	g0002	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02273	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02280	hp2	a0001	c0001	t0006	g0002	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02293	hp2	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02300	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02451	hp2	a0001	c0001	t0015	g0002	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02523	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02523	hp2	a0001	c0001	t0020	g0001	EAS	KHV	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02572	hp1	a0001	c0001	t0003	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02622	hp1	a0001	c0001	t0006	g0004	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02622	hp2	a0001	c0001	t0009	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02630	hp1	a0001	c0001	t0006	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02630	hp2	a0001	c0001	t0007	g0009	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02647	hp2	a0001	c0001	t0006	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02683	hp1	a0001	c0001	t0005	g0002	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02717	hp1	a0001	c0001	t0044	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02717	hp2	a0001	c0001	t0007	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02723	hp1	a0001	c0001	t0003	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02723	hp2	a0001	c0001	t0003	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02809	hp1	a0001	c0001	t0006	g0004	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02809	hp2	a0001	c0001	t0003	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02818	hp1	a0001	c0001	t0042	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02818	hp2	a0001	c0001	t0005	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02886	hp2	a0001	c0001	t0006	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02896	hp1	a0001	c0001	t0018	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02896	hp2	a0001	c0001	t0006	g0004	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02897	hp1	a0001	c0001	t0018	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02897	hp2	a0001	c0001	t0006	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02922	hp1	a0001	c0001	t0007	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02922	hp2	a0001	c0001	t0027	g0001	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02965	hp1	a0001	c0001	t0040	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02965	hp2	a0001	c0001	t0007	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02970	hp1	a0001	c0001	t0009	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02970	hp2	a0001	c0001	t0021	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02976	hp1	a0001	c0001	t0010	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02976	hp2	a0001	c0001	t0011	g0003	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03041	hp1	a0001	c0001	t0007	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03041	hp2	a0001	c0001	t0029	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03098	hp1	a0001	c0001	t0009	g0002	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03130	hp1	a0001	c0001	t0007	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03130	hp2	a0001	c0001	t0011	g0003	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03139	hp1	a0001	c0001	t0003	g0001	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03139	hp2	a0001	c0001	t0007	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03195	hp2	a0001	c0001	t0015	g0002	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03209	hp1	a0001	c0001	t0011	g0003	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03209	hp2	a0001	c0001	t0009	g0002	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03225	hp2	a0001	c0001	t0006	g0002	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03239	hp2	a0001	c0001	t0003	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03486	hp1	a0001	c0001	t0017	g0001	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03486	hp2	a0001	c0001	t0009	g0002	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03491	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03516	hp2	a0001	c0001	t0011	g0003	AFR	ESN	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03540	hp2	a0001	c0001	t0006	g0002	AFR	GWD	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03579	hp1	a0001	c0001	t0006	g0004	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03579	hp2	a0001	c0001	t0003	g0001	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03654	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03669	hp1	a0001	c0001	t0008	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03669	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03688	hp1	a0001	c0001	t0005	g0002	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03704	hp1	a0001	c0001	t0030	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03704	hp2	a0001	c0001	t0014	g0002	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03834	hp1	a0001	c0001	t0002	g0002	SAS	BEB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03834	hp2	a0001	c0001	t0008	g0001	SAS	BEB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03942	hp2	a0001	c0001	t0023	g0002	SAS	BEB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG04204	hp1	a0001	c0001	t0031	g0007	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG04228	hp1	a0001	c0001	t0014	g0002	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18522	hp1	a0001	c0001	t0003	g0001	AFR	YRI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18522	hp2	a0001	c0001	t0018	g0002	AFR	YRI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18612	hp1	a0001	c0001	t0002	g0002	EAS	CHB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18612	hp2	a0001	c0001	t0002	g0002	EAS	CHB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18747	hp2	a0001	c0001	t0002	g0002	EAS	CHB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18906	hp1	a0001	c0001	t0021	g0002	AFR	YRI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18942	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18944	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18945	hp1	a0001	c0001	t0013	g0005	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18945	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18946	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18947	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18951	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18953	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18953	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18954	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18957	hp1	a0001	c0001	t0010	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18957	hp2	a0001	c0001	t0017	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18961	hp1	a0001	c0001	t0005	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18962	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18962	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18965	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18966	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18966	hp2	a0001	c0001	t0017	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18967	hp2	a0001	c0001	t0032	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18970	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18970	hp2	a0001	c0001	t0028	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18971	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18971	hp2	a0001	c0001	t0004	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18972	hp1	a0001	c0001	t0008	g0012	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18972	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18974	hp1	a0001	c0001	t0008	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18974	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18977	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18977	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18979	hp2	a0001	c0001	t0005	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18980	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18982	hp1	a0001	c0001	t0016	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18982	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18983	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18983	hp2	a0001	c0001	t0034	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18984	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18984	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18986	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18986	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18987	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18990	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18990	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18992	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18992	hp2	a0001	c0001	t0004	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18993	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18995	hp1	a0001	c0001	t0004	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18995	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18997	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18997	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA18999	hp2	a0001	c0001	t0005	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19002	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19002	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19005	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19005	hp2	a0001	c0001	t0008	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19006	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19006	hp2	a0001	c0001	t0008	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19007	hp1	a0001	c0001	t0016	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19007	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19009	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19010	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19011	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19012	hp1	a0001	c0001	t0037	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19030	hp1	a0001	c0001	t0007	g0002	AFR	LWK	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19030	hp2	a0001	c0001	t0009	g0002	AFR	LWK	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19043	hp1	a0001	c0001	t0018	g0002	AFR	LWK	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19043	hp2	a0001	c0001	t0006	g0004	AFR	LWK	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19054	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19055	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19055	hp2	a0001	c0001	t0004	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19056	hp1	a0001	c0001	t0010	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19057	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19057	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19058	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19062	hp1	a0001	c0001	t0026	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19062	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19064	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19065	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19067	hp2	a0001	c0001	t0005	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19068	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19070	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19076	hp1	a0001	c0001	t0033	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19076	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19077	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19078	hp1	a0001	c0001	t0005	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19078	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19079	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19080	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19081	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19083	hp1	a0001	c0001	t0016	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19083	hp2	a0001	c0001	t0010	g0004	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19084	hp1	a0001	c0001	t0013	g0005	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19084	hp2	a0001	c0001	t0013	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19085	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19087	hp1	a0001	c0001	t0005	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19088	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19088	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19090	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19090	hp2	a0001	c0001	t0005	g0002	EAS	JPT	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19240	hp1	a0001	c0001	t0009	g0002	AFR	YRI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA19240	hp2	a0001	c0001	t0012	g0001	AFR	YRI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA20129	hp1	a0001	c0001	t0007	g0002	AFR	ASW	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA20129	hp2	a0001	c0001	t0009	g0002	AFR	ASW	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA20752	hp1	a0001	c0001	t0008	g0001	EUR	TSI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA20752	hp2	a0001	c0001	t0002	g0002	EUR	TSI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA20805	hp1	a0001	c0001	t0004	g0001	EUR	TSI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA20805	hp2	a0001	c0001	t0020	g0001	EUR	TSI	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01123	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02109	hp1	a0001	c0001	t0002	g0002	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02109	hp2	a0001	c0001	t0015	g0002	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02486	hp1	a0001	c0001	t0003	g0006	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02486	hp2	a0001	c0001	t0009	g0002	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02559	hp1	a0001	c0001	t0012	g0001	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG02559	hp2	a0001	c0001	t0011	g0003	AFR	ACB	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03471	hp1	a0001	c0001	t0007	g0002	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG03471	hp2	a0001	c0001	t0011	g0003	AFR	MSL	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG06807	hp1	a0001	c0001	t0012	g0001	AFR	USA	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
HG06807	hp2	a0001	c0001	t0003	g0001	AFR	USA	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA20300	hp1	a0001	c0001	t0007	g0002	AFR	USA	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA20300	hp2	a0001	c0001	t0006	g0002	AFR	USA	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA21309	hp1	a0001	c0001	t0024	g0001	AFR	LWK	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
NA21309	hp2	a0001	c0001	t0007	g0002	AFR	LWK	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148
homoSapiens_grch38	hp1	a0001	c0001	t0012	g0001	REF	REF	SPCS1_chr3_52701106_52716148	SPCS1	chr3	52701106	52716148

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr3:52706873	A A	G G	1	a0001c0002 a0001c0002	4	NA18954.hp1 NA19057.hp1 NA19064.hp1 others(1): Show NA18954.hp1 NA19057.hp1 NA19064.hp1 NA19080.hp1	synonymous_variant	LOW	c.177A>G c.177A>G	p.Ser59Ser p.Ser59Ser	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/4	318/3786	177/309	59/102			chr3	52706873

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr3:52706166	C C	G G	27	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(24): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0021 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045	193	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(190): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03834.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp2	5_prime_UTR_variant	MODIFIER	c.-81C>G c.-81C>G	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	1/4	81		chr3	52706166
chr3:52706213	A A	T T	1	a0001c0001t0030 a0001c0001t0030	1	HG03704.hp1 HG03704.hp1	5_prime_UTR_variant	MODIFIER	c.-34A>T c.-34A>T	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	1/4	34		chr3	52706213
chr3:52708039	G G	A A	1	a0001c0001t0022 a0001c0001t0022	1	HG01255.hp2 HG01255.hp2	3_prime_UTR_variant	MODIFIER	c.227G>A c.227G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	227		chr3	52708039
chr3:52708040	A A	C C	1	a0001c0001t0022 a0001c0001t0022	1	HG01255.hp2 HG01255.hp2	3_prime_UTR_variant	MODIFIER	c.228A>C c.228A>C	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	228		chr3	52708040
chr3:52708289	TGAG TGAG	T T	2	a0001c0001t0006 a0001c0001t0007 a0001c0001t0006 a0001c0001t0007	25	HG02280.hp2 HG02622.hp1 HG02630.hp1 others(22): Show HG02280.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp2 HG02809.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03225.hp2 HG03471.hp1 HG03540.hp2 HG03579.hp1 NA19030.hp1 NA19043.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.482_484delAGG c.482_484delAGG	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	482	INFO_REALIGN_3_PRIME	chr3	52708289
chr3:52708397	T T	C C	17	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 others(14): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0018 a0001c0001t0021 a0001c0001t0023 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039	144	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(141): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG01069.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01169.hp2 HG01192.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01516.hp2 HG01517.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02258.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02523.hp1 HG02559.hp2 HG02683.hp1 HG02818.hp2 HG02896.hp1 HG02897.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp2 HG03209.hp1 HG03471.hp2 HG03491.hp2 HG03516.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03942.hp2 HG04204.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.585T>C c.585T>C	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	585		chr3	52708397
chr3:52708521	A A	T T	22	a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 others(19): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045	161	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(158): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02258.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02622.hp2 HG02683.hp1 HG02717.hp1 HG02818.hp1 HG02818.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03834.hp1 HG04228.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp2 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.709A>T c.709A>T	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	709		chr3	52708521
chr3:52708709	A A	G G	5	a0001c0001t0015 a0001c0001t0042 a0001c0001t0043 others(2): Show a0001c0001t0015 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045	9	HG01074.hp1 HG01243.hp1 HG01884.hp2 others(6): Show HG01074.hp1 HG01243.hp1 HG01884.hp2 HG01891.hp1 HG02109.hp2 HG02451.hp2 HG02717.hp1 HG02818.hp1 HG03195.hp2	3_prime_UTR_variant	MODIFIER	c.897A>G c.897A>G	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	897		chr3	52708709
chr3:52709131	C C	T T	2	a0001c0001t0014 a0001c0001t0041 a0001c0001t0014 a0001c0001t0041	6	HG00741.hp1 HG01167.hp2 HG01346.hp1 others(3): Show HG00741.hp1 HG01167.hp2 HG01346.hp1 HG01515.hp2 HG03704.hp2 HG04228.hp1	3_prime_UTR_variant	MODIFIER	c.1319C>T c.1319C>T	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1319		chr3	52709131
chr3:52709181	C C	CA CA	6	a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 others(3): Show a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0001t0014 a0001c0001t0019 a0001c0001t0032	39	HG00741.hp1 HG01069.hp1 HG01071.hp2 others(36): Show HG00741.hp1 HG01069.hp1 HG01071.hp2 HG01167.hp2 HG01346.hp1 HG02280.hp2 HG02559.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp2 HG02809.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03704.hp2 HG04228.hp1 NA18967.hp2 NA19030.hp1 NA19043.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1385dupA c.1385dupA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1386	INFO_REALIGN_3_PRIME	chr3	52709181
chr3:52709181	CA CA	C C	4	a0001c0001t0013 a0001c0001t0020 a0001c0001t0029 others(1): Show a0001c0001t0013 a0001c0001t0020 a0001c0001t0029 a0001c0001t0045	9	HG00438.hp2 HG01891.hp1 HG02071.hp2 others(6): Show HG00438.hp2 HG01891.hp1 HG02071.hp2 HG02523.hp2 HG03041.hp2 NA18945.hp1 NA19084.hp1 NA19084.hp2 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.1385delA c.1385delA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1385	INFO_REALIGN_3_PRIME	chr3	52709181
chr3:52709243	A A	G G	1	a0001c0001t0021 a0001c0001t0021	2	HG02970.hp2 NA18906.hp1 HG02970.hp2 NA18906.hp1	3_prime_UTR_variant	MODIFIER	c.1431A>G c.1431A>G	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1431		chr3	52709243
chr3:52709273	C C	T T	2	a0001c0001t0038 a0001c0001t0039 a0001c0001t0038 a0001c0001t0039	2	HG00639.hp2 HG01069.hp2 HG00639.hp2 HG01069.hp2	3_prime_UTR_variant	MODIFIER	c.1461C>T c.1461C>T	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1461		chr3	52709273
chr3:52709285	CACAGTCT others(507): Show CACAGTCTTAAAGATGAGTTTTTAAATTAATTTAGGAAGATGAATTAAGC ACTCAAGTAAAAACGATAAAAGTGGGAAGAAAAGATGTTTAAACAAAATA AAAATATACAGTATGGTAATTAATAAGAAAGTATGGGGGAAGTCAGGTGT GGTGGTTCATGCCTATAATCCCAGCACTTTCAGAGGCCGATGCAGGAGGA CTGCTTGAATGCAGTTTGAGACCAGCCTGGGCAACACAGACTTCCTCTCC ACAAAAAATTTTAAAAATTAGCCAGGTGTGGTGGTGCATGCCTGTGGTCC TAGCTACTTGAGGGGCTGAGGTGGGAGGATCACTTAAGCCCAGGAGGTCA AGGCTGCAGTGAGCTATGATCACCTCACTGCACTCCAGGCTGGGTGACAG AGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGATATGGGTGAG ATTCCTTTAATTCTAATAAAATACCTACTTTATACCAATACATTAGAAAA ATTAAGTAAAACTGA	C C	1	a0001c0001t0028 a0001c0001t0028	1	NA18970.hp2 NA18970.hp2	3_prime_UTR_variant	MODIFIER	c.1474_1987del c.1474_1987del	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1474		chr3	52709285
chr3:52709341	G G	A A	1	a0001c0001t0033 a0001c0001t0033	1	NA19076.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.1529G>A c.1529G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1529		chr3	52709341
chr3:52709368	G G	A A	28	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(25): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0021 a0001c0001t0023 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045	194	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(191): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03834.hp1 HG03942.hp2 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1556G>A c.1556G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1556		chr3	52709368
chr3:52709389	T T	C C	1	a0001c0001t0024 a0001c0001t0024	1	NA21309.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1577T>C c.1577T>C	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1577		chr3	52709389
chr3:52709521	C C	T T	2	a0001c0001t0043 a0001c0001t0044 a0001c0001t0043 a0001c0001t0044	2	HG01243.hp1 HG02717.hp1 HG01243.hp1 HG02717.hp1	3_prime_UTR_variant	MODIFIER	c.1709C>T c.1709C>T	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1709		chr3	52709521
chr3:52709700	C C	CA CA	7	a0001c0001t0006 a0001c0001t0008 a0001c0001t0025 others(4): Show a0001c0001t0006 a0001c0001t0008 a0001c0001t0025 a0001c0001t0036 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044	27	HG00673.hp2 HG01243.hp1 HG01261.hp2 others(24): Show HG00673.hp2 HG01243.hp1 HG01261.hp2 HG02080.hp2 HG02258.hp1 HG02280.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG03225.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03834.hp2 NA18972.hp1 NA18974.hp1 NA19005.hp2 NA19006.hp2 NA19043.hp2 NA20300.hp2 NA20752.hp1	3_prime_UTR_variant	MODIFIER	c.1910dupA c.1910dupA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1911	INFO_REALIGN_3_PRIME	chr3	52709700
chr3:52709700	C C	CAA CAA	4	a0001c0001t0007 a0001c0001t0015 a0001c0001t0040 others(1): Show a0001c0001t0007 a0001c0001t0015 a0001c0001t0040 a0001c0001t0045	19	HG01074.hp1 HG01884.hp2 HG01891.hp1 others(16): Show HG01074.hp1 HG01884.hp2 HG01891.hp1 HG02109.hp2 HG02451.hp2 HG02630.hp2 HG02717.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp2 HG03471.hp1 NA19030.hp1 NA20129.hp1 NA20300.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1909_1910dupAA c.1909_1910dupAA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1911	INFO_REALIGN_3_PRIME	chr3	52709700
chr3:52709700	C C	CAAA CAAA	8	a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 others(5): Show a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0018 a0001c0001t0021 a0001c0001t0023 a0001c0001t0031 a0001c0001t0039	32	HG01069.hp2 HG01081.hp1 HG01192.hp1 others(29): Show HG01069.hp2 HG01081.hp1 HG01192.hp1 HG01257.hp1 HG02155.hp2 HG02486.hp2 HG02559.hp2 HG02622.hp2 HG02896.hp1 HG02897.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp2 HG03209.hp1 HG03209.hp2 HG03471.hp2 HG03486.hp2 HG03516.hp2 HG03942.hp2 HG04204.hp1 NA18522.hp2 NA18906.hp1 NA18957.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19083.hp2 NA19240.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.1908_1910dupAAA c.1908_1910dupAAA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1911	INFO_REALIGN_3_PRIME	chr3	52709700
chr3:52709700	C C	CAAAA CAAAA	5	a0001c0001t0002 a0001c0001t0013 a0001c0001t0034 others(2): Show a0001c0001t0002 a0001c0001t0013 a0001c0001t0034 a0001c0001t0035 a0001c0001t0038	101	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(98): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00621.hp2 HG00639.hp2 HG00673.hp1 HG00738.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01169.hp2 HG01258.hp1 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01496.hp2 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02523.hp1 HG03491.hp2 HG03654.hp2 HG03669.hp2 HG03834.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19068.hp1 NA19070.hp2 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.1907_1910dupAAAA c.1907_1910dupAAAA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1911	INFO_REALIGN_3_PRIME	chr3	52709700
chr3:52709700	C C	CAAAAA CAAAAA	3	a0001c0001t0005 a0001c0001t0032 a0001c0001t0033 a0001c0001t0005 a0001c0001t0032 a0001c0001t0033	18	HG00609.hp2 HG00642.hp1 HG01433.hp1 others(15): Show HG00609.hp2 HG00642.hp1 HG01433.hp1 HG01516.hp2 HG01517.hp1 HG02080.hp1 HG02683.hp1 HG02818.hp2 HG03688.hp1 NA18961.hp1 NA18967.hp2 NA18979.hp2 NA18999.hp2 NA19067.hp2 NA19076.hp1 NA19078.hp1 NA19087.hp1 NA19090.hp2	3_prime_UTR_variant	MODIFIER	c.1906_1910dupAAAA others(1): Show c.1906_1910dupAAAAA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1911	INFO_REALIGN_3_PRIME	chr3	52709700
chr3:52709700	CA CA	C C	3	a0001c0001t0017 a0001c0001t0026 a0001c0001t0027 a0001c0001t0017 a0001c0001t0026 a0001c0001t0027	6	HG01515.hp1 HG02922.hp2 HG03486.hp1 others(3): Show HG01515.hp1 HG02922.hp2 HG03486.hp1 NA18957.hp2 NA18966.hp2 NA19062.hp1	3_prime_UTR_variant	MODIFIER	c.1910delA c.1910delA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1910	INFO_REALIGN_3_PRIME	chr3	52709700
chr3:52709700	CAAAAAAA CAAAAAAA	C C	2	a0001c0001t0014 a0001c0001t0041 a0001c0001t0014 a0001c0001t0041	6	HG00741.hp1 HG01167.hp2 HG01346.hp1 others(3): Show HG00741.hp1 HG01167.hp2 HG01346.hp1 HG01515.hp2 HG03704.hp2 HG04228.hp1	3_prime_UTR_variant	MODIFIER	c.1904_1910delAAAA others(3): Show c.1904_1910delAAAAAAA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1904	INFO_REALIGN_3_PRIME	chr3	52709700
chr3:52709727	T T	C C	1	a0001c0001t0034 a0001c0001t0034	1	NA18983.hp2 NA18983.hp2	3_prime_UTR_variant	MODIFIER	c.1915T>C c.1915T>C	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	1915		chr3	52709727
chr3:52709838	G G	A A	3	a0001c0001t0004 a0001c0001t0022 a0001c0001t0026 a0001c0001t0004 a0001c0001t0022 a0001c0001t0026	18	HG00735.hp1 HG00738.hp2 HG01070.hp1 others(15): Show HG00735.hp1 HG00738.hp2 HG01070.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01433.hp2 HG02055.hp2 HG02257.hp1 NA18971.hp2 NA18992.hp2 NA18995.hp1 NA19055.hp2 NA19062.hp1 NA20805.hp1	3_prime_UTR_variant	MODIFIER	c.2026G>A c.2026G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	2026		chr3	52709838
chr3:52710208	C C	CA CA	13	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 others(10): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0021 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039	137	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(134): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG01069.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01169.hp2 HG01192.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01516.hp2 HG01517.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02523.hp1 HG02559.hp2 HG02683.hp1 HG02818.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp2 HG03209.hp1 HG03471.hp2 HG03491.hp2 HG03516.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03834.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.2403dupA c.2403dupA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	2404	INFO_REALIGN_3_PRIME	chr3	52710208
chr3:52710364	TA TA	T T	41	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(38): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0045 a0001c0002t0001	398	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(395): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.2567delA c.2567delA	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	2567	INFO_REALIGN_3_PRIME	chr3	52710364
chr3:52710420	T T	G G	11	a0001c0001t0009 a0001c0001t0014 a0001c0001t0015 others(8): Show a0001c0001t0009 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0036 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045	30	HG00741.hp1 HG01074.hp1 HG01167.hp2 others(27): Show HG00741.hp1 HG01074.hp1 HG01167.hp2 HG01243.hp1 HG01346.hp1 HG01515.hp2 HG01884.hp2 HG01891.hp1 HG02109.hp2 HG02258.hp1 HG02451.hp2 HG02486.hp2 HG02622.hp2 HG02717.hp1 HG02818.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG02970.hp1 HG03098.hp1 HG03195.hp2 HG03209.hp2 HG03486.hp2 HG03704.hp2 HG04228.hp1 NA18522.hp2 NA19030.hp2 NA19043.hp1 NA19240.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.2608T>G c.2608T>G	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	2608		chr3	52710420
chr3:52710444	A A	G G	28	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(25): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0021 a0001c0001t0023 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045	194	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(191): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03834.hp1 HG03942.hp2 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.2632A>G c.2632A>G	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	2632		chr3	52710444
chr3:52710476	CAG CAG	C C	2	a0001c0001t0014 a0001c0001t0041 a0001c0001t0014 a0001c0001t0041	6	HG00741.hp1 HG01167.hp2 HG01346.hp1 others(3): Show HG00741.hp1 HG01167.hp2 HG01346.hp1 HG01515.hp2 HG03704.hp2 HG04228.hp1	3_prime_UTR_variant	MODIFIER	c.2665_2666delAG c.2665_2666delAG	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	2665		chr3	52710476
chr3:52711071	T T	C C	9	a0001c0001t0001 a0001c0001t0008 a0001c0001t0016 others(6): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0016 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0028 a0001c0001t0030 a0001c0002t0001	172	HG00099.hp1 HG00140.hp2 HG00323.hp1 others(169): Show HG00099.hp1 HG00140.hp2 HG00323.hp1 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00642.hp2 HG00673.hp2 HG00735.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01496.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp2 HG01928.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp2 HG02080.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02155.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02523.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03195.hp1 HG03225.hp1 HG03239.hp1 HG03486.hp1 HG03491.hp1 HG03516.hp1 HG03540.hp1 HG03654.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp2 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18944.hp1 NA18946.hp2 NA18947.hp2 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18970.hp2 NA18972.hp1 NA18974.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18980.hp1 NA18982.hp1 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18993.hp1 NA18993.hp2 NA18997.hp2 NA18999.hp1 NA19005.hp2 NA19006.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp2 NA19054.hp1 NA19054.hp2 NA19056.hp2 NA19057.hp1 NA19058.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19067.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp2 NA19078.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19083.hp1 NA19085.hp2 NA19087.hp2 NA20752.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.3259T>C c.3259T>C	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	3259		chr3	52711071
chr3:52711122	TAAAAACA others(3): Show TAAAAACATAC	T T	1	a0001c0001t0033 a0001c0001t0033	1	NA19076.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.3311_3320delAAAA others(6): Show c.3311_3320delAAAAACATAC	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	4/4	3311		chr3	52711122

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr3:52706325	C C	G G	1	a0001c0001t0013g0005 a0001c0001t0013g0005	4	HG00438.hp2 HG02071.hp2 NA18945.hp1 others(1): Show HG00438.hp2 HG02071.hp2 NA18945.hp1 NA19084.hp1	intron_variant	MODIFIER	c.36+43C>G c.36+43C>G	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	1/3		chr3	52706325
chr3:52706619	C C	A A	1	a0001c0001t0011g0003 a0001c0001t0011g0003	6	HG02559.hp2 HG02976.hp2 HG03130.hp2 others(3): Show HG02559.hp2 HG02976.hp2 HG03130.hp2 HG03209.hp1 HG03471.hp2 HG03516.hp2	intron_variant	MODIFIER	c.37-25C>A c.37-25C>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	1/3		chr3	52706619
chr3:52706904	G G	A A	1	a0001c0001t0031g0007 a0001c0001t0031g0007	1	HG04204.hp1 HG04204.hp1	intron_variant	MODIFIER	c.183+25G>A c.183+25G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/3		chr3	52706904
chr3:52707117	G G	A A	1	a0001c0001t0001g0008 a0001c0001t0001g0008	1	HG01070.hp2 HG01070.hp2	intron_variant	MODIFIER	c.183+238G>A c.183+238G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/3		chr3	52707117
chr3:52707144	G G	A A	32	a0001c0001t0002g0002 a0001c0001t0005g0002 a0001c0001t0006g0002 others(29): Show a0001c0001t0002g0002 a0001c0001t0005g0002 a0001c0001t0006g0002 a0001c0001t0006g0004 a0001c0001t0007g0002 a0001c0001t0007g0009 a0001c0001t0009g0002 a0001c0001t0010g0002 a0001c0001t0010g0004 a0001c0001t0011g0003 a0001c0001t0013g0002 a0001c0001t0013g0005 a0001c0001t0014g0002 a0001c0001t0015g0002 a0001c0001t0018g0002 a0001c0001t0021g0002 a0001c0001t0023g0002 a0001c0001t0031g0007 a0001c0001t0032g0002 a0001c0001t0033g0002 a0001c0001t0034g0002 a0001c0001t0035g0002 a0001c0001t0036g0002 a0001c0001t0037g0002 a0001c0001t0038g0002 a0001c0001t0039g0002 a0001c0001t0040g0002 a0001c0001t0041g0002 a0001c0001t0042g0002 a0001c0001t0043g0002 a0001c0001t0044g0002 a0001c0001t0045g0002	194	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(191): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03834.hp1 HG03942.hp2 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp2	intron_variant	MODIFIER	c.183+265G>A c.183+265G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/3		chr3	52707144
chr3:52707285	T T	G G	1	a0001c0001t0001g0010 a0001c0001t0001g0010	1	HG02004.hp1 HG02004.hp1	intron_variant	MODIFIER	c.184-402T>G c.184-402T>G	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/3		chr3	52707285
chr3:52707311	A A	G G	1	a0001c0001t0008g0012 a0001c0001t0008g0012	1	NA18972.hp1 NA18972.hp1	intron_variant	MODIFIER	c.184-376A>G c.184-376A>G	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/3		chr3	52707311
chr3:52707500	G G	A A	1	a0001c0001t0007g0009 a0001c0001t0007g0009	1	HG02630.hp2 HG02630.hp2	intron_variant	MODIFIER	c.184-187G>A c.184-187G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/3		chr3	52707500
chr3:52707521	G G	A A	1	a0001c0001t0003g0006 a0001c0001t0003g0006	2	HG02257.hp2 HG02486.hp1 HG02257.hp2 HG02486.hp1	intron_variant	MODIFIER	c.184-166G>A c.184-166G>A	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/3		chr3	52707521
chr3:52707565	AT AT	A A	31	a0001c0001t0001g0011 a0001c0001t0002g0002 a0001c0001t0005g0002 others(28): Show a0001c0001t0001g0011 a0001c0001t0002g0002 a0001c0001t0005g0002 a0001c0001t0006g0002 a0001c0001t0007g0002 a0001c0001t0007g0009 a0001c0001t0009g0002 a0001c0001t0010g0002 a0001c0001t0011g0003 a0001c0001t0013g0002 a0001c0001t0013g0005 a0001c0001t0014g0002 a0001c0001t0015g0002 a0001c0001t0018g0002 a0001c0001t0021g0002 a0001c0001t0023g0002 a0001c0001t0031g0007 a0001c0001t0032g0002 a0001c0001t0033g0002 a0001c0001t0034g0002 a0001c0001t0035g0002 a0001c0001t0036g0002 a0001c0001t0037g0002 a0001c0001t0038g0002 a0001c0001t0039g0002 a0001c0001t0040g0002 a0001c0001t0041g0002 a0001c0001t0042g0002 a0001c0001t0043g0002 a0001c0001t0044g0002 a0001c0001t0045g0002	189	HG00323.hp2 HG00438.hp2 HG00544.hp2 others(186): Show HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03834.hp1 HG03942.hp2 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp2	intron_variant	MODIFIER	c.184-111delT c.184-111delT	SPCS1	ENSG00000114902.14	transcript	ENST00000619898.5	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr3	52707565

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🧬 JoGo Online Haplotype Explorer SPCS1_chr3_52701106_52716148

JoGo Local Haplotype Explorer (on iGV) SPCS1_chr3_52701106_52716148

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 2)

TTranscript Level Haplotype Info (Total: 45)

GGenebody Level Haplotype Info (Total: 12)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 2)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 46)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 55)

Haplotype Details by Sample (Haploid Level) (Total: 410)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 34)

GGenebody Level Haplotype Variants (Intron) (Total: 10)

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Annotation (Repeats)

Annotation (SNP Array)