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geneid	3226
ensemblid	ENSG00000180818.5
hgncid	5122
symbol	HOXC10
name	homeobox C10
refseq_nuc	NM_017409.4
refseq_prot	NP_059105.2
ensembl_nuc	ENST00000303460.5
ensembl_prot	ENSP00000307321.4
mane_status	MANE Select
chr	chr12
start	53985146
end	53990279
strand	+
ver	v1.2
region	chr12:53985146-53990279
region5000	chr12:53980146-53995279
regionname0	HOXC10_chr12_53985146_53990279
regionname5000	HOXC10_chr12_53980146_53995279

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	342	361	92	74	138	16	41	103	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0002	0/0	342	6	0	0	6	0	0	5	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0003	0/0	342	2	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0004	0/0	342	1	0	0	0	0	1	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0005	0/0	342	1	0	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0006	0/0	342	1	1	0	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	1029	330	90	64	129	13	34	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
c0002	0/0	1029	28	2	8	8	3	7	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
c0003	0/0	1029	6	0	0	6	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
c0004	0/0	1029	2	1	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
c0005	0/0	1029	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
c0006	0/0	1029	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
c0007	0/0	1029	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
c0008	0/0	1029	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
c0009	0/0	1029	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	946	177	14	39	97	9	18	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0002	0/0	948	117	23	26	40	7	21	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0003	0/0	947	17	12	3	0	0	2	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0004	0/0	949	16	8	5	2	0	1	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0005	0/0	948	13	13	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0006	0/0	949	7	7	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0007	0/0	946	4	4	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0008	0/0	946	3	0	0	3	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0009	0/0	948	3	3	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0010	0/0	946	3	3	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0011	0/0	948	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0012	0/0	948	2	2	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0013	0/0	946	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0014	0/0	946	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0015	0/0	946	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0016	0/0	949	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0017	0/0	948	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0018	0/0	947	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0019	0/0	949	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
t0020	0/0	947	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	216	43	43	104	8	18	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0002	0/0	83	16	21	31	4	11	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0003	0/0	11	8	1	1	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0004	0/0	10	1	2	1	2	4	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0005	0/0	5	5	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0006	0/0	5	5	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0007	0/0	5	5	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0008	0/0	4	4	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0009	0/0	3	0	0	0	0	3	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0010	0/0	3	1	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0011	0/0	3	2	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0012	0/0	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0013	0/0	2	0	0	0	0	2	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0014	0/0	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0015	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0016	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0017	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0018	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0019	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0020	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0021	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0022	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0023	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0024	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0025	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0026	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0027	0/0	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0028	0/0	1	0	0	0	1	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0029	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0030	0/0	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0031	0/0	1	0	0	0	1	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0032	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
g0033	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	1029	330	90	64	129	13	34	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0002	0/0	1029	28	2	8	8	3	7	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0005	0/0	1029	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0009	0/0	1029	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0002c0003	0/0	1029	6	0	0	6	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0003c0004	0/0	1029	2	1	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0004c0008	0/0	1029	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0005c0007	0/0	1029	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0006c0006	0/0	1029	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1974	160	13	35	86	8	18	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0002	0/0	1976	97	22	20	37	5	13	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0003	0/0	1975	15	11	2	0	0	2	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0004	0/0	1977	15	8	4	2	0	1	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0005	0/0	1976	13	13	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0006	0/0	1977	7	7	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0007	0/0	1974	4	4	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0008	0/0	1974	3	0	0	3	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0009	0/0	1976	3	3	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0010	0/0	1974	2	2	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0011	0/0	1976	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0012	0/0	1976	2	2	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0013	0/0	1974	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0014	0/0	1974	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0016	0/0	1977	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0017	0/0	1976	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0018	0/0	1975	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0019	0/0	1977	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0001t0020	0/0	1975	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0002t0001	0/0	1974	10	1	2	6	1	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0002t0002	0/0	1976	17	1	5	2	2	7	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0002t0004	0/0	1977	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0005t0001	0/0	1974	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0001c0009t0015	0/0	1974	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0002c0003t0001	0/0	1974	5	0	0	5	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0002c0003t0002	0/0	1976	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0003c0004t0003	0/0	1975	2	1	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0004c0008t0002	0/0	1976	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0005c0007t0002	0/0	1976	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279
a0006c0006t0010	0/0	1974	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	copy fasta	chr12	53980146	53995279

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	135	10	26	77	7	15	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0002	0/0	10	1	5	3	1	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0003	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0005	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0009	0/0	3	0	0	0	0	3	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0012	0/0	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0015	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0017	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0019	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0020	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0021	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0022	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0024	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0001g0026	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0001	0/0	50	13	11	23	1	2	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0002	0/0	32	6	6	13	2	5	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0004	0/0	7	0	1	0	2	4	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0005	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0008	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0014	0/0	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0016	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0025	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0027	0/0	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0029	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0002g0032	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0003g0001	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0003g0002	0/0	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0003g0003	0/0	7	5	1	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0003g0004	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0003g0006	0/0	4	4	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0003g0011	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0004g0001	0/0	6	3	3	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0004g0002	0/0	7	4	1	1	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0004g0004	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0004g0006	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0005g0001	0/0	13	13	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0006g0001	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0006g0003	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0006g0005	0/0	2	2	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0006g0008	0/0	2	2	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0006g0023	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0007g0007	0/0	4	4	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0008g0001	0/0	3	0	0	3	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0009g0005	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0009g0007	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0009g0008	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0010g0002	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0010g0003	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0011g0010	0/0	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0012g0001	0/0	2	2	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0013g0010	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0014g0001	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0016g0033	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0017g0002	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0018g0002	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0019g0001	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0001t0020g0002	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0002t0001g0002	0/0	10	1	2	6	1	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0002t0002g0002	0/0	11	1	4	2	0	4	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0002t0002g0004	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0002t0002g0013	0/0	2	0	0	0	0	2	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0002t0002g0028	0/0	1	0	0	0	1	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0002t0002g0030	0/0	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0002t0002g0031	0/0	1	0	0	0	1	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0002t0004g0002	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0005t0001g0001	0/0	2	0	2	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0001c0009t0015g0018	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0002c0003t0001g0002	0/0	5	0	0	5	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0002c0003t0002g0002	0/0	1	0	0	1	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0003c0004t0003g0011	0/0	2	1	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0004c0008t0002g0001	0/0	1	0	0	0	0	1	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0005c0007t0002g0002	0/0	1	0	1	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
a0006c0006t0010g0003	0/0	1	1	0	0	0	0	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0002	EUR	GBR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00099	hp2	a0001	c0001	t0002	g0001	EUR	GBR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00280	hp2	a0001	c0002	t0002	g0031	EUR	FIN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00323	hp2	a0001	c0002	t0001	g0002	EUR	FIN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00408	hp2	a0001	c0001	t0002	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00544	hp1	a0001	c0001	t0002	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00544	hp2	a0001	c0001	t0002	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00621	hp1	a0002	c0003	t0001	g0002	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00639	hp2	a0001	c0001	t0002	g0004	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00642	hp2	a0001	c0002	t0004	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00733	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00733	hp2	a0001	c0001	t0002	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00735	hp1	a0001	c0001	t0004	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00735	hp2	a0001	c0001	t0004	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00738	hp2	a0001	c0001	t0003	g0003	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00741	hp1	a0001	c0002	t0002	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01069	hp2	a0001	c0001	t0002	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01070	hp1	a0001	c0005	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01070	hp2	a0001	c0001	t0001	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01071	hp1	a0001	c0001	t0002	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01071	hp2	a0001	c0005	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01074	hp2	a0001	c0001	t0001	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01081	hp1	a0001	c0001	t0001	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01081	hp2	a0001	c0002	t0001	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01099	hp1	a0001	c0001	t0003	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01106	hp1	a0001	c0001	t0002	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01109	hp1	a0003	c0004	t0003	g0011	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01109	hp2	a0001	c0001	t0004	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01167	hp1	a0001	c0001	t0011	g0010	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01167	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01168	hp1	a0001	c0002	t0001	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01169	hp2	a0001	c0001	t0011	g0010	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01175	hp1	a0001	c0001	t0002	g0025	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01192	hp2	a0001	c0001	t0004	g0002	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01255	hp2	a0001	c0001	t0002	g0002	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01256	hp1	a0001	c0001	t0001	g0015	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01256	hp2	a0001	c0001	t0001	g0002	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01258	hp2	a0001	c0001	t0020	g0002	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01261	hp1	a0001	c0001	t0001	g0012	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01346	hp2	a0001	c0001	t0002	g0002	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01358	hp1	a0001	c0001	t0002	g0002	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01361	hp1	a0001	c0001	t0001	g0012	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01361	hp2	a0005	c0007	t0002	g0002	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01433	hp2	a0001	c0001	t0002	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01496	hp1	a0001	c0002	t0002	g0002	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01515	hp2	a0001	c0002	t0002	g0028	EUR	IBS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01516	hp1	a0001	c0001	t0002	g0002	EUR	IBS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01516	hp2	a0001	c0001	t0002	g0004	EUR	IBS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01517	hp2	a0001	c0001	t0002	g0004	EUR	IBS	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01884	hp1	a0001	c0001	t0018	g0002	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01884	hp2	a0001	c0001	t0007	g0007	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01891	hp1	a0001	c0001	t0002	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01891	hp2	a0001	c0001	t0005	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01943	hp1	a0001	c0002	t0002	g0004	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01952	hp1	a0001	c0001	t0002	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01952	hp2	a0001	c0002	t0002	g0002	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01975	hp1	a0001	c0001	t0002	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01978	hp2	a0001	c0001	t0001	g0021	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01981	hp1	a0001	c0001	t0002	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01981	hp2	a0001	c0002	t0002	g0002	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02015	hp1	a0001	c0001	t0002	g0002	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02015	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02040	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02055	hp1	a0001	c0001	t0019	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02055	hp2	a0001	c0001	t0002	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02074	hp2	a0001	c0001	t0004	g0004	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02080	hp1	a0001	c0001	t0002	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02080	hp2	a0001	c0001	t0001	g0003	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02083	hp1	a0001	c0001	t0002	g0002	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02083	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02135	hp2	a0001	c0001	t0002	g0002	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02145	hp1	a0001	c0001	t0009	g0005	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02145	hp2	a0001	c0001	t0003	g0003	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02148	hp1	a0001	c0001	t0002	g0002	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02155	hp1	a0001	c0001	t0001	g0002	EAS	CDX	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02165	hp2	a0001	c0001	t0002	g0001	EAS	CDX	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02257	hp2	a0001	c0001	t0006	g0008	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02258	hp2	a0001	c0001	t0009	g0008	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02273	hp1	a0001	c0001	t0002	g0032	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02273	hp2	a0001	c0001	t0002	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02280	hp1	a0001	c0001	t0002	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02300	hp1	a0001	c0001	t0002	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02300	hp2	a0001	c0001	t0002	g0001	AMR	PEL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02451	hp1	a0001	c0001	t0006	g0023	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02451	hp2	a0001	c0001	t0005	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02523	hp2	a0001	c0001	t0001	g0017	EAS	KHV	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02572	hp1	a0001	c0001	t0003	g0003	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02572	hp2	a0001	c0001	t0002	g0002	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02602	hp2	a0001	c0002	t0002	g0002	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02622	hp1	a0001	c0001	t0017	g0002	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02622	hp2	a0001	c0001	t0005	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02630	hp1	a0001	c0001	t0002	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02630	hp2	a0001	c0001	t0010	g0002	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02647	hp1	a0001	c0001	t0006	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02647	hp2	a0001	c0001	t0002	g0005	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02683	hp2	a0001	c0001	t0002	g0002	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02698	hp1	a0001	c0001	t0003	g0002	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02717	hp1	a0001	c0001	t0012	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02717	hp2	a0001	c0001	t0006	g0003	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02723	hp1	a0001	c0001	t0005	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02723	hp2	a0001	c0001	t0001	g0002	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02809	hp1	a0001	c0001	t0005	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02809	hp2	a0001	c0002	t0002	g0002	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02886	hp1	a0001	c0001	t0002	g0002	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02886	hp2	a0001	c0001	t0003	g0006	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02895	hp1	a0001	c0001	t0004	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02895	hp2	a0001	c0001	t0002	g0002	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02896	hp1	a0001	c0001	t0002	g0008	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02896	hp2	a0001	c0001	t0002	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02897	hp1	a0001	c0001	t0002	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02897	hp2	a0001	c0001	t0002	g0002	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02922	hp1	a0001	c0001	t0003	g0004	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02965	hp1	a0001	c0001	t0003	g0011	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02965	hp2	a0001	c0001	t0004	g0002	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02970	hp2	a0001	c0001	t0007	g0007	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02976	hp1	a0003	c0004	t0003	g0011	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02976	hp2	a0001	c0001	t0002	g0001	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03041	hp2	a0001	c0001	t0002	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03098	hp1	a0001	c0001	t0005	g0001	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03098	hp2	a0001	c0001	t0002	g0002	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03139	hp1	a0001	c0001	t0002	g0001	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03139	hp2	a0001	c0001	t0003	g0003	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03195	hp1	a0001	c0001	t0004	g0002	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03195	hp2	a0001	c0001	t0003	g0003	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03209	hp1	a0001	c0001	t0003	g0006	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03209	hp2	a0001	c0001	t0007	g0007	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03225	hp1	a0001	c0001	t0016	g0033	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03225	hp2	a0001	c0001	t0004	g0006	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03239	hp1	a0001	c0002	t0002	g0002	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03239	hp2	a0001	c0001	t0002	g0002	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03453	hp1	a0001	c0001	t0005	g0001	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03453	hp2	a0001	c0001	t0003	g0003	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03486	hp1	a0001	c0001	t0003	g0006	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03486	hp2	a0001	c0001	t0006	g0005	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03490	hp1	a0001	c0002	t0002	g0013	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03490	hp2	a0004	c0008	t0002	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03492	hp1	a0001	c0002	t0002	g0013	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03516	hp1	a0001	c0001	t0005	g0001	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03516	hp2	a0001	c0001	t0002	g0001	AFR	ESN	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03540	hp1	a0001	c0001	t0006	g0005	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03540	hp2	a0001	c0001	t0005	g0001	AFR	GWD	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03579	hp1	a0001	c0001	t0002	g0001	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03579	hp2	a0001	c0001	t0005	g0001	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03654	hp2	a0001	c0001	t0002	g0002	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03669	hp1	a0001	c0001	t0001	g0009	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03688	hp1	a0001	c0002	t0002	g0002	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03704	hp1	a0001	c0001	t0002	g0004	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03710	hp2	a0001	c0001	t0001	g0009	SAS	PJL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03831	hp1	a0001	c0001	t0003	g0003	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03831	hp2	a0001	c0001	t0001	g0009	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03927	hp2	a0001	c0002	t0002	g0030	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03942	hp1	a0001	c0001	t0004	g0002	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03942	hp2	a0001	c0001	t0002	g0004	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04115	hp1	a0001	c0001	t0002	g0001	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04115	hp2	a0001	c0001	t0002	g0002	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04184	hp1	a0001	c0001	t0002	g0027	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04184	hp2	a0001	c0001	t0002	g0001	SAS	BEB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04199	hp2	a0001	c0001	t0002	g0004	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04204	hp2	a0001	c0001	t0002	g0004	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04228	hp1	a0001	c0001	t0002	g0002	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG04228	hp2	a0001	c0002	t0002	g0002	SAS	STU	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18522	hp1	a0001	c0001	t0013	g0010	AFR	YRI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18522	hp2	a0001	c0001	t0005	g0001	AFR	YRI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18906	hp1	a0001	c0001	t0002	g0002	AFR	YRI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18906	hp2	a0001	c0001	t0003	g0006	AFR	YRI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18940	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18942	hp1	a0001	c0001	t0001	g0020	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18947	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18951	hp1	a0001	c0001	t0014	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18951	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18953	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18962	hp1	a0002	c0003	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18964	hp2	a0001	c0002	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18966	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18971	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18971	hp2	a0001	c0001	t0008	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18975	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18979	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18981	hp2	a0001	c0002	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18982	hp1	a0001	c0001	t0008	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18986	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18993	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18994	hp1	a0002	c0003	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18995	hp2	a0001	c0002	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19000	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19000	hp2	a0001	c0009	t0015	g0018	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19002	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19002	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19003	hp1	a0002	c0003	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19003	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19006	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19006	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19009	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19010	hp1	a0001	c0001	t0008	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19012	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19030	hp1	a0001	c0001	t0002	g0001	AFR	LWK	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19030	hp2	a0001	c0001	t0005	g0001	AFR	LWK	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19043	hp1	a0006	c0006	t0010	g0003	AFR	LWK	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19043	hp2	a0001	c0001	t0001	g0001	AFR	LWK	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19062	hp2	a0001	c0002	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19063	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19064	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19064	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19065	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19066	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19066	hp2	a0002	c0003	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19067	hp2	a0001	c0001	t0001	g0022	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19068	hp1	a0001	c0001	t0001	g0026	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19068	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19072	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19072	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19074	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19079	hp2	a0002	c0003	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19080	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19081	hp1	a0001	c0001	t0004	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19081	hp2	a0001	c0002	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19082	hp2	a0001	c0001	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19084	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19085	hp1	a0001	c0001	t0002	g0002	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19089	hp2	a0001	c0001	t0002	g0029	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19090	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19091	hp1	a0001	c0001	t0001	g0024	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19240	hp1	a0001	c0001	t0007	g0007	AFR	YRI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA19240	hp2	a0001	c0001	t0004	g0002	AFR	YRI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20129	hp1	a0001	c0001	t0010	g0003	AFR	ASW	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20129	hp2	a0001	c0001	t0005	g0001	AFR	ASW	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20805	hp1	a0001	c0001	t0002	g0002	EUR	TSI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20905	hp1	a0001	c0001	t0002	g0014	SAS	GIH	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG01123	hp2	a0001	c0001	t0002	g0001	AMR	CLM	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02109	hp1	a0001	c0001	t0006	g0008	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02109	hp2	a0001	c0001	t0001	g0005	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02486	hp1	a0001	c0001	t0001	g0019	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02486	hp2	a0001	c0001	t0002	g0016	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02559	hp1	a0001	c0001	t0012	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03471	hp1	a0001	c0001	t0004	g0001	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG03471	hp2	a0001	c0001	t0009	g0007	AFR	MSL	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG06807	hp1	a0001	c0001	t0004	g0002	AFR	USA	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
HG06807	hp2	a0001	c0002	t0001	g0002	AFR	USA	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA18955	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA20300	hp2	a0001	c0001	t0004	g0001	AFR	USA	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA21309	hp1	a0001	c0001	t0002	g0001	AFR	LWK	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	HOXC10_chr12_53980146_53995279	HOXC10	chr12	53980146	53995279

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr12:53985333	A A	G G	1	a0002 a0002	6	HG00621.hp1 NA18962.hp1 NA18994.hp1 others(3): Show HG00621.hp1 NA18962.hp1 NA18994.hp1 NA19003.hp1 NA19066.hp2 NA19079.hp2	missense_variant	MODERATE	c.74A>G c.74A>G	p.Tyr25Cys p.Tyr25Cys	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/2	188/1976	74/1029	25/342	chr12	53985333
chr12:53985812	G G	A A	1	a0006 a0006	1	NA19043.hp1 NA19043.hp1	missense_variant	MODERATE	c.553G>A c.553G>A	p.Glu185Lys p.Glu185Lys	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/2	667/1976	553/1029	185/342	chr12	53985812
chr12:53985819	T T	G G	1	a0003 a0003	2	HG01109.hp1 HG02976.hp1 HG01109.hp1 HG02976.hp1	missense_variant	MODERATE	c.560T>G c.560T>G	p.Leu187Arg p.Leu187Arg	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/2	674/1976	560/1029	187/342	chr12	53985819
chr12:53989269	G G	T T	1	a0004 a0004	1	HG03490.hp2 HG03490.hp2	missense_variant	MODERATE	c.852G>T c.852G>T	p.Glu284Asp p.Glu284Asp	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	966/1976	852/1029	284/342	chr12	53989269
chr12:53989307	G G	A A	1	a0005 a0005	1	HG01361.hp2 HG01361.hp2	missense_variant	MODERATE	c.890G>A c.890G>A	p.Arg297His p.Arg297His	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	1004/1976	890/1029	297/342	chr12	53989307

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr12:53985511	C C	T T	1	a0001c0005 a0001c0005	2	HG01070.hp1 HG01071.hp2 HG01070.hp1 HG01071.hp2	synonymous_variant	LOW	c.252C>T c.252C>T	p.Ala84Ala p.Ala84Ala	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/2	366/1976	252/1029	84/342	chr12	53985511
chr12:53985886	C C	T T	2	a0001c0002 a0002c0003 a0001c0002 a0002c0003	34	HG00280.hp2 HG00323.hp2 HG00621.hp1 others(31): Show HG00280.hp2 HG00323.hp2 HG00621.hp1 HG00642.hp2 HG00741.hp1 HG01081.hp2 HG01168.hp1 HG01496.hp1 HG01515.hp2 HG01943.hp1 HG01952.hp2 HG01981.hp2 HG02602.hp2 HG02809.hp2 HG03239.hp1 HG03490.hp1 HG03492.hp1 HG03688.hp1 HG03927.hp2 HG04228.hp2 HG06807.hp2 NA18962.hp1 NA18964.hp2 NA18981.hp2 NA18994.hp1 NA18995.hp2 NA19000.hp1 NA19003.hp1 NA19062.hp2 NA19065.hp1 NA19066.hp2 NA19079.hp2 NA19080.hp1 NA19081.hp2	synonymous_variant	LOW	c.627C>T c.627C>T	p.Pro209Pro p.Pro209Pro	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/2	741/1976	627/1029	209/342	chr12	53985886
chr12:53985892	C C	T T	1	a0001c0009 a0001c0009	1	NA19000.hp2 NA19000.hp2	synonymous_variant	LOW	c.633C>T c.633C>T	p.Pro211Pro p.Pro211Pro	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/2	747/1976	633/1029	211/342	chr12	53985892

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr12:53985197	GA GA	G G	2	a0001c0001t0007 a0001c0001t0020 a0001c0001t0007 a0001c0001t0020	5	HG01258.hp2 HG01884.hp2 HG02970.hp2 others(2): Show HG01258.hp2 HG01884.hp2 HG02970.hp2 HG03209.hp2 NA19240.hp1	5_prime_UTR_variant	MODIFIER	c.-54delA c.-54delA	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/2	54	INFO_REALIGN_3_PRIME	chr12	53985197
chr12:53989593	G G	C C	2	a0001c0001t0011 a0001c0001t0013 a0001c0001t0011 a0001c0001t0013	3	HG01167.hp1 HG01169.hp2 NA18522.hp1 HG01167.hp1 HG01169.hp2 NA18522.hp1	3_prime_UTR_variant	MODIFIER	c.147G>C c.147G>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	147		chr12	53989593
chr12:53989679	T T	C C	1	a0001c0001t0014 a0001c0001t0014	1	NA18951.hp1 NA18951.hp1	3_prime_UTR_variant	MODIFIER	c.233T>C c.233T>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	233		chr12	53989679
chr12:53989716	G G	A A	25	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0005t0001 a0001c0009t0015 a0002c0003t0001 a0002c0003t0002 a0003c0004t0003 a0004c0008t0002 a0005c0007t0002	353	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(350): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18947.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19006.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.270G>A c.270G>A	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	270		chr12	53989716
chr12:53989836	C C	T T	1	a0001c0001t0018 a0001c0001t0018	1	HG01884.hp1 HG01884.hp1	3_prime_UTR_variant	MODIFIER	c.390C>T c.390C>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	390		chr12	53989836
chr12:53990007	G G	A A	1	a0001c0009t0015 a0001c0009t0015	1	NA19000.hp2 NA19000.hp2	3_prime_UTR_variant	MODIFIER	c.561G>A c.561G>A	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	561		chr12	53990007
chr12:53990009	A A	T T	1	a0001c0001t0017 a0001c0001t0017	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.563A>T c.563A>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	563		chr12	53990009
chr12:53990140	G G	GC GC	3	a0001c0001t0004 a0001c0001t0019 a0001c0002t0004 a0001c0001t0004 a0001c0001t0019 a0001c0002t0004	17	HG00642.hp2 HG00735.hp1 HG00735.hp2 others(14): Show HG00642.hp2 HG00735.hp1 HG00735.hp2 HG01109.hp2 HG01192.hp2 HG02055.hp1 HG02074.hp2 HG02895.hp1 HG02965.hp2 HG03195.hp1 HG03225.hp2 HG03471.hp1 HG03942.hp1 HG06807.hp1 NA19081.hp1 NA19240.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.705dupC c.705dupC	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	706	INFO_REALIGN_3_PRIME	chr12	53990140
chr12:53990140	GCC GCC	G G	14	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(11): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0013 a0001c0001t0014 a0001c0001t0018 a0001c0002t0001 a0001c0005t0001 a0001c0009t0015 a0002c0003t0001 a0003c0004t0003 a0006c0006t0010	208	HG00099.hp1 HG00280.hp1 HG00323.hp1 others(205): Show HG00099.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp2 HG02109.hp2 HG02135.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02258.hp1 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02723.hp2 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03486.hp1 HG03492.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG04199.hp1 HG04204.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA19000.hp1 NA19000.hp2 NA19003.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19084.hp2 NA19085.hp2 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.704_705delCC c.704_705delCC	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	704	INFO_REALIGN_3_PRIME	chr12	53990140
chr12:53990151	CA CA	C C	2	a0001c0001t0009 a0001c0001t0012 a0001c0001t0009 a0001c0001t0012	5	HG02145.hp1 HG02258.hp2 HG02559.hp1 others(2): Show HG02145.hp1 HG02258.hp2 HG02559.hp1 HG02717.hp1 HG03471.hp2	3_prime_UTR_variant	MODIFIER	c.708delA c.708delA	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	708	INFO_REALIGN_3_PRIME	chr12	53990151
chr12:53990152	A A	C C	1	a0001c0001t0016 a0001c0001t0016	1	HG03225.hp1 HG03225.hp1	3_prime_UTR_variant	MODIFIER	c.706A>C c.706A>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	706		chr12	53990152
chr12:53990247	A A	AT AT	8	a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 others(5): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0012 a0001c0001t0016 a0001c0001t0018 a0003c0004t0003	35	HG00738.hp2 HG01099.hp1 HG01109.hp1 others(32): Show HG00738.hp2 HG01099.hp1 HG01109.hp1 HG01884.hp1 HG01884.hp2 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp1 HG02647.hp1 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp1 HG03831.hp1 NA18906.hp2 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.801_802insT c.801_802insT	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	802		chr12	53990247
chr12:53990272	T T	C C	1	a0001c0001t0008 a0001c0001t0008	3	NA18971.hp2 NA18982.hp1 NA19010.hp1 NA18971.hp2 NA18982.hp1 NA19010.hp1	3_prime_UTR_variant	MODIFIER	c.826T>C c.826T>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	2/2	826		chr12	53990272

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr12:53986120	C C	T T	1	a0001c0001t0016g0033 a0001c0001t0016g0033	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.751+110C>T c.751+110C>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986120
chr12:53986232	A A	G G	27	a0001c0001t0001g0002 a0001c0001t0001g0026 a0001c0001t0002g0002 others(24): Show a0001c0001t0001g0002 a0001c0001t0001g0026 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0025 a0001c0001t0002g0027 a0001c0001t0002g0029 a0001c0001t0002g0032 a0001c0001t0003g0002 a0001c0001t0003g0004 a0001c0001t0004g0002 a0001c0001t0004g0004 a0001c0001t0010g0002 a0001c0001t0017g0002 a0001c0001t0018g0002 a0001c0001t0020g0002 a0001c0002t0001g0002 a0001c0002t0002g0002 a0001c0002t0002g0004 a0001c0002t0002g0013 a0001c0002t0002g0028 a0001c0002t0002g0030 a0001c0002t0002g0031 a0001c0002t0004g0002 a0002c0003t0001g0002 a0002c0003t0002g0002 a0005c0007t0002g0002	103	HG00099.hp1 HG00280.hp2 HG00323.hp2 others(100): Show HG00099.hp1 HG00280.hp2 HG00323.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01168.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01943.hp1 HG01952.hp2 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp2 HG02148.hp1 HG02155.hp1 HG02273.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp1 HG02630.hp2 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG03098.hp2 HG03195.hp1 HG03239.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03654.hp2 HG03688.hp1 HG03704.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18940.hp1 NA18962.hp1 NA18964.hp2 NA18981.hp2 NA18986.hp2 NA18994.hp1 NA18995.hp2 NA19000.hp1 NA19002.hp1 NA19003.hp1 NA19006.hp1 NA19062.hp2 NA19063.hp1 NA19065.hp1 NA19066.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19085.hp1 NA19089.hp2 NA19240.hp2 NA20805.hp1	intron_variant	MODIFIER	c.751+222A>G c.751+222A>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986232
chr12:53986254	T T	C C	1	a0001c0001t0001g0012 a0001c0001t0001g0012	2	HG01261.hp1 HG01361.hp1 HG01261.hp1 HG01361.hp1	intron_variant	MODIFIER	c.751+244T>C c.751+244T>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986254
chr12:53986279	G G	T T	2	a0001c0001t0003g0011 a0003c0004t0003g0011 a0001c0001t0003g0011 a0003c0004t0003g0011	3	HG01109.hp1 HG02965.hp1 HG02976.hp1 HG01109.hp1 HG02965.hp1 HG02976.hp1	intron_variant	MODIFIER	c.751+269G>T c.751+269G>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986279
chr12:53986416	T T	G G	6	a0001c0001t0001g0003 a0001c0001t0002g0014 a0001c0001t0003g0003 others(3): Show a0001c0001t0001g0003 a0001c0001t0002g0014 a0001c0001t0003g0003 a0001c0001t0006g0003 a0001c0001t0010g0003 a0006c0006t0010g0003	12	HG00738.hp2 HG02080.hp2 HG02145.hp2 others(9): Show HG00738.hp2 HG02080.hp2 HG02145.hp2 HG02572.hp1 HG02717.hp2 HG03139.hp2 HG03195.hp2 HG03453.hp2 HG03831.hp1 NA19043.hp1 NA20129.hp1 NA20905.hp1	intron_variant	MODIFIER	c.751+406T>G c.751+406T>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986416
chr12:53986490	T T	C C	1	a0001c0001t0001g0015 a0001c0001t0001g0015	1	HG01256.hp1 HG01256.hp1	intron_variant	MODIFIER	c.751+480T>C c.751+480T>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986490
chr12:53986629	C C	T T	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	NA19091.hp1 NA19091.hp1	intron_variant	MODIFIER	c.751+619C>T c.751+619C>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986629
chr12:53986909	A A	G G	3	a0001c0001t0006g0023 a0001c0001t0007g0007 a0001c0001t0009g0007 a0001c0001t0006g0023 a0001c0001t0007g0007 a0001c0001t0009g0007	6	HG01884.hp2 HG02451.hp1 HG02970.hp2 others(3): Show HG01884.hp2 HG02451.hp1 HG02970.hp2 HG03209.hp2 HG03471.hp2 NA19240.hp1	intron_variant	MODIFIER	c.751+899A>G c.751+899A>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986909
chr12:53986920	C C	T T	4	a0001c0001t0003g0006 a0001c0001t0004g0006 a0001c0001t0011g0010 others(1): Show a0001c0001t0003g0006 a0001c0001t0004g0006 a0001c0001t0011g0010 a0001c0001t0013g0010	8	HG01167.hp1 HG01169.hp2 HG02886.hp2 others(5): Show HG01167.hp1 HG01169.hp2 HG02886.hp2 HG03209.hp1 HG03225.hp2 HG03486.hp1 NA18522.hp1 NA18906.hp2	intron_variant	MODIFIER	c.751+910C>T c.751+910C>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986920
chr12:53986921	T T	C C	1	a0001c0001t0002g0025 a0001c0001t0002g0025	1	HG01175.hp1 HG01175.hp1	intron_variant	MODIFIER	c.751+911T>C c.751+911T>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986921
chr12:53986938	T T	C C	4	a0001c0001t0003g0006 a0001c0001t0004g0006 a0001c0001t0011g0010 others(1): Show a0001c0001t0003g0006 a0001c0001t0004g0006 a0001c0001t0011g0010 a0001c0001t0013g0010	8	HG01167.hp1 HG01169.hp2 HG02886.hp2 others(5): Show HG01167.hp1 HG01169.hp2 HG02886.hp2 HG03209.hp1 HG03225.hp2 HG03486.hp1 NA18522.hp1 NA18906.hp2	intron_variant	MODIFIER	c.751+928T>C c.751+928T>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986938
chr12:53986983	G G	C C	1	a0001c0001t0002g0016 a0001c0001t0002g0016	1	HG02486.hp2 HG02486.hp2	intron_variant	MODIFIER	c.751+973G>C c.751+973G>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53986983
chr12:53986996	GA GA	G G	12	a0001c0001t0001g0005 a0001c0001t0002g0005 a0001c0001t0002g0008 others(9): Show a0001c0001t0001g0005 a0001c0001t0002g0005 a0001c0001t0002g0008 a0001c0001t0002g0016 a0001c0001t0003g0006 a0001c0001t0004g0006 a0001c0001t0006g0005 a0001c0001t0006g0008 a0001c0001t0009g0005 a0001c0001t0009g0008 a0001c0001t0011g0010 a0001c0001t0013g0010	18	HG01167.hp1 HG01169.hp2 HG02109.hp1 others(15): Show HG01167.hp1 HG01169.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02257.hp2 HG02258.hp2 HG02486.hp2 HG02647.hp2 HG02886.hp2 HG02896.hp1 HG03209.hp1 HG03225.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp1 NA18522.hp1 NA18906.hp2	intron_variant	MODIFIER	c.751+990delA c.751+990delA	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr12	53986996
chr12:53987034	G G	A A	1	a0001c0001t0001g0017 a0001c0001t0001g0017	1	HG02523.hp2 HG02523.hp2	intron_variant	MODIFIER	c.751+1024G>A c.751+1024G>A	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987034
chr12:53987060	C C	G G	2	a0001c0001t0011g0010 a0001c0001t0013g0010 a0001c0001t0011g0010 a0001c0001t0013g0010	3	HG01167.hp1 HG01169.hp2 NA18522.hp1 HG01167.hp1 HG01169.hp2 NA18522.hp1	intron_variant	MODIFIER	c.751+1050C>G c.751+1050C>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987060
chr12:53987307	C C	G G	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	HG02273.hp1 HG02273.hp1	intron_variant	MODIFIER	c.751+1297C>G c.751+1297C>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987307
chr12:53987334	C C	A A	1	a0001c0009t0015g0018 a0001c0009t0015g0018	1	NA19000.hp2 NA19000.hp2	intron_variant	MODIFIER	c.751+1324C>A c.751+1324C>A	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987334
chr12:53987427	G G	A A	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	NA19068.hp1 NA19068.hp1	intron_variant	MODIFIER	c.751+1417G>A c.751+1417G>A	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987427
chr12:53987452	T T	C C	1	a0001c0001t0001g0019 a0001c0001t0001g0019	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.751+1442T>C c.751+1442T>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987452
chr12:53987788	C C	T T	1	a0001c0002t0002g0031 a0001c0002t0002g0031	1	HG00280.hp2 HG00280.hp2	intron_variant	MODIFIER	c.752-1381C>T c.752-1381C>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987788
chr12:53987939	GA GA	G G	23	a0001c0001t0001g0002 a0001c0001t0001g0026 a0001c0001t0002g0002 others(20): Show a0001c0001t0001g0002 a0001c0001t0001g0026 a0001c0001t0002g0002 a0001c0001t0002g0025 a0001c0001t0002g0027 a0001c0001t0002g0029 a0001c0001t0002g0032 a0001c0001t0003g0002 a0001c0001t0004g0002 a0001c0001t0010g0002 a0001c0001t0017g0002 a0001c0001t0018g0002 a0001c0001t0020g0002 a0001c0002t0001g0002 a0001c0002t0002g0002 a0001c0002t0002g0013 a0001c0002t0002g0028 a0001c0002t0002g0030 a0001c0002t0002g0031 a0001c0002t0004g0002 a0002c0003t0001g0002 a0002c0003t0002g0002 a0005c0007t0002g0002	93	HG00099.hp1 HG00280.hp2 HG00323.hp2 others(90): Show HG00099.hp1 HG00280.hp2 HG00323.hp2 HG00621.hp1 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01168.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01952.hp2 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp2 HG02148.hp1 HG02155.hp1 HG02273.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp1 HG02630.hp2 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp2 HG02965.hp2 HG03098.hp2 HG03195.hp1 HG03239.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03654.hp2 HG03688.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18940.hp1 NA18962.hp1 NA18964.hp2 NA18981.hp2 NA18986.hp2 NA18994.hp1 NA18995.hp2 NA19000.hp1 NA19002.hp1 NA19003.hp1 NA19006.hp1 NA19062.hp2 NA19063.hp1 NA19065.hp1 NA19066.hp2 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19085.hp1 NA19089.hp2 NA19240.hp2 NA20805.hp1	intron_variant	MODIFIER	c.752-1229delA c.752-1229delA	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987939
chr12:53987988	G G	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	3	HG03669.hp1 HG03710.hp2 HG03831.hp2 HG03669.hp1 HG03710.hp2 HG03831.hp2	intron_variant	MODIFIER	c.752-1181G>T c.752-1181G>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53987988
chr12:53988014	C C	T T	3	a0001c0001t0002g0008 a0001c0001t0006g0008 a0001c0001t0009g0008 a0001c0001t0002g0008 a0001c0001t0006g0008 a0001c0001t0009g0008	4	HG02109.hp1 HG02257.hp2 HG02258.hp2 others(1): Show HG02109.hp1 HG02257.hp2 HG02258.hp2 HG02896.hp1	intron_variant	MODIFIER	c.752-1155C>T c.752-1155C>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988014
chr12:53988034	C C	G G	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	NA19067.hp2 NA19067.hp2	intron_variant	MODIFIER	c.752-1135C>G c.752-1135C>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988034
chr12:53988073	G G	C C	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	NA18942.hp1 NA18942.hp1	intron_variant	MODIFIER	c.752-1096G>C c.752-1096G>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988073
chr12:53988213	C C	G G	1	a0001c0001t0002g0014 a0001c0001t0002g0014	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.752-956C>G c.752-956C>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988213
chr12:53988250	A A	C C	1	a0001c0002t0002g0013 a0001c0002t0002g0013	2	HG03490.hp1 HG03492.hp1 HG03490.hp1 HG03492.hp1	intron_variant	MODIFIER	c.752-919A>C c.752-919A>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988250
chr12:53988287	A A	T T	4	a0001c0001t0003g0006 a0001c0001t0004g0006 a0001c0001t0011g0010 others(1): Show a0001c0001t0003g0006 a0001c0001t0004g0006 a0001c0001t0011g0010 a0001c0001t0013g0010	8	HG01167.hp1 HG01169.hp2 HG02886.hp2 others(5): Show HG01167.hp1 HG01169.hp2 HG02886.hp2 HG03209.hp1 HG03225.hp2 HG03486.hp1 NA18522.hp1 NA18906.hp2	intron_variant	MODIFIER	c.752-882A>T c.752-882A>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988287
chr12:53988374	C C	T T	1	a0001c0002t0002g0030 a0001c0002t0002g0030	1	HG03927.hp2 HG03927.hp2	intron_variant	MODIFIER	c.752-795C>T c.752-795C>T	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988374
chr12:53988413	A A	G G	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	HG01978.hp2 HG01978.hp2	intron_variant	MODIFIER	c.752-756A>G c.752-756A>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988413
chr12:53988485	T T	G G	1	a0001c0001t0002g0027 a0001c0001t0002g0027	1	HG04184.hp1 HG04184.hp1	intron_variant	MODIFIER	c.752-684T>G c.752-684T>G	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988485
chr12:53988517	G G	A A	1	a0001c0002t0002g0028 a0001c0002t0002g0028	1	HG01515.hp2 HG01515.hp2	intron_variant	MODIFIER	c.752-652G>A c.752-652G>A	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988517
chr12:53988733	G G	C C	1	a0001c0001t0002g0029 a0001c0001t0002g0029	1	NA19089.hp2 NA19089.hp2	intron_variant	MODIFIER	c.752-436G>C c.752-436G>C	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988733
chr12:53988759	C C	A A	1	a0001c0001t0006g0023 a0001c0001t0006g0023	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.752-410C>A c.752-410C>A	HOXC10	ENSG00000180818.5	transcript	ENST00000303460.5	protein_coding	1/1		chr12	53988759

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🧬 JoGo Online Haplotype Explorer HOXC10_chr12_53980146_53995279

JoGo Local Haplotype Explorer (on iGV) HOXC10_chr12_53980146_53995279

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ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 6)

CCoding Level Haplotype Info (Total: 9)

TTranscript Level Haplotype Info (Total: 20)

GGenebody Level Haplotype Info (Total: 33)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 9)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 30)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 73)

Haplotype Details by Sample (Haploid Level) (Total: 372)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 5)

CCoding Level Variants (Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 13)

GGenebody Level Haplotype Variants (Intron) (Total: 34)

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Annotation (Repeats)

Annotation (SNP Array)